Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
AASDH	132949	broad.mit.edu	37	4	57211259	57211259	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AASS	10157	broad.mit.edu	37	7	121738539	121738539	+	Silent	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA10	10349	broad.mit.edu	37	17	67178860	67178860	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA13	154664	broad.mit.edu	37	7	48390351	48390351	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB1	5243	broad.mit.edu	37	7	87179872	87179872	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB4	5244	broad.mit.edu	37	7	87032462	87032462	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC1	4363	broad.mit.edu	37	16	16225547	16225547	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC4	10257	broad.mit.edu	37	13	95829973	95829973	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC5	10057	broad.mit.edu	37	3	183682981	183682981	+	Silent	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC9	10060	broad.mit.edu	37	12	21970121	21970121	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABLIM3	22885	broad.mit.edu	37	5	148586759	148586759	+	Intron	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACACA	31	broad.mit.edu	37	17	35615290	35615290	+	Frame_Shift_Del	DEL	G	-	-			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACACB	32	broad.mit.edu	37	12	109637270	109637270	+	Silent	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACADVL	37	broad.mit.edu	37	17	7125754	7125754	+	Intron	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACBD7	414149	broad.mit.edu	37	10	15059390	15059390	+	Intron	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACCN1	40	broad.mit.edu	37	17	32366548	32366548	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACCN4	55515	broad.mit.edu	37	2	220379622	220379622	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACCSL	390110	broad.mit.edu	37	11	44074297	44074297	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACE	1636	broad.mit.edu	37	17	61566371	61566371	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACLY	47	broad.mit.edu	37	17	40063719	40063719	+	Silent	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACP2	53	broad.mit.edu	37	11	47266983	47266983	+	Intron	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTN2	88	broad.mit.edu	37	1	236912564	236912564	+	Silent	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACVR2B	93	broad.mit.edu	37	3	38520136	38520136	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM10	102	broad.mit.edu	37	15	58938103	58938103	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM23	8745	broad.mit.edu	37	2	207452046	207452046	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM33	80332	broad.mit.edu	37	20	3652889	3652889	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106725142	106725142	+	RNA	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106801161	106801161	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM7	8756	broad.mit.edu	37	8	24324541	24324541	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS12	81792	broad.mit.edu	37	5	33891834	33891834	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS14	140766	broad.mit.edu	37	10	72517685	72517685	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS16	170690	broad.mit.edu	37	5	5190192	5190192	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS17	170691	broad.mit.edu	37	15	100672099	100672099	+	Intron	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS20	80070	broad.mit.edu	37	12	43826240	43826240	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS20	80070	broad.mit.edu	37	12	43837564	43837564	+	Intron	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS9	56999	broad.mit.edu	37	3	64617237	64617237	+	Intron	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY5	111	broad.mit.edu	37	3	123066664	123066664	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADH1B	125	broad.mit.edu	37	4	100237263	100237263	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADIPOR1	51094	broad.mit.edu	37	1	202920271	202920271	+	5'UTR	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADIPOR2	79602	broad.mit.edu	37	12	1887259	1887259	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADM	133	broad.mit.edu	37	11	10328198	10328198	+	3'UTR	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADNP	23394	broad.mit.edu	37	20	49518512	49518512	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADRA1D	146	broad.mit.edu	37	20	4202311	4202311	+	Silent	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFF3	3899	broad.mit.edu	37	2	100185432	100185432	+	Intron	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFF3	3899	broad.mit.edu	37	2	100360620	100360620	+	Intron	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFP	174	broad.mit.edu	37	4	74303031	74303031	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGBL1	123624	broad.mit.edu	37	15	87531381	87531381	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGPHD1	123688	broad.mit.edu	37	15	78805811	78805811	+	Intron	SNP	A	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGPS	8540	broad.mit.edu	37	2	178386182	178386182	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGXT2L1	64850	broad.mit.edu	37	4	109672168	109672168	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AIMP2	7965	broad.mit.edu	37	7	6054643	6054643	+	Intron	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AJAP1	55966	broad.mit.edu	37	1	4834458	4834458	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AK7	122481	broad.mit.edu	37	14	96922763	96922763	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AK7	122481	broad.mit.edu	37	14	96924383	96924383	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKAP1	8165	broad.mit.edu	37	17	55190108	55190108	+	Intron	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKR1B10	57016	broad.mit.edu	37	7	134217844	134217844	+	Intron	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKR1B15	441282	broad.mit.edu	37	7	134252977	134252977	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKR1E2	83592	broad.mit.edu	37	10	4884565	4884565	+	Intron	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH8A1	64577	broad.mit.edu	37	6	135253996	135253996	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH9A1	223	broad.mit.edu	37	1	165638720	165638720	+	Intron	SNP	G	T	T	rs112550701		TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALG10	84920	broad.mit.edu	37	12	34175352	34175352	+	5'UTR	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALG1	56052	broad.mit.edu	37	16	5129756	5129756	+	Silent	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALK	238	broad.mit.edu	37	2	29606525	29606526	+	Intron	DNP	AC	GA	GA			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALK	238	broad.mit.edu	37	2	29917880	29917881	+	Splice_Site	DNP	CC	AT	AT			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALPK2	115701	broad.mit.edu	37	18	56204617	56204617	+	Frame_Shift_Del	DEL	G	-	-			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALPP	250	broad.mit.edu	37	2	233244766	233244766	+	Intron	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALX4	60529	broad.mit.edu	37	11	44296805	44296805	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMAC1	146861	broad.mit.edu	37	17	33521019	33521019	+	Missense_Mutation	SNP	C	A	A	rs148354465		TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMFR	267	broad.mit.edu	37	16	56401630	56401630	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMHR2	269	broad.mit.edu	37	12	53819601	53819601	+	Silent	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMPD2	271	broad.mit.edu	37	1	110169246	110169246	+	Intron	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMPH	273	broad.mit.edu	37	7	38462117	38462117	+	Intron	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMPH	273	broad.mit.edu	37	7	38543367	38543367	+	Intron	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMY1A	276	broad.mit.edu	37	1	104297220	104297220	+	Silent	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK3	288	broad.mit.edu	37	10	62038579	62038579	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD17	26057	broad.mit.edu	37	4	73987474	73987474	+	Silent	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD17	26057	broad.mit.edu	37	4	74008402	74008402	+	Silent	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD37	353322	broad.mit.edu	37	4	186320857	186320857	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD5	63926	broad.mit.edu	37	20	10033801	10033801	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO3	63982	broad.mit.edu	37	11	26538397	26538397	+	Silent	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO7	50636	broad.mit.edu	37	2	242142826	242142826	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP3D1	8943	broad.mit.edu	37	19	2114393	2114393	+	Intron	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APAF1	317	broad.mit.edu	37	12	99074148	99074148	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APBA2	321	broad.mit.edu	37	15	29346679	29346679	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APBB3	10307	broad.mit.edu	37	5	139942054	139942054	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
API5	8539	broad.mit.edu	37	11	43342304	43342304	+	Intron	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOB	338	broad.mit.edu	37	2	21227177	21227177	+	Silent	SNP	G	A	A	rs12713501	byFrequency	TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOB	338	broad.mit.edu	37	2	21233898	21233898	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AQPEP	206338	broad.mit.edu	37	5	115351168	115351168	+	Intron	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARAP2	116984	broad.mit.edu	37	4	36212324	36212324	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP15	55843	broad.mit.edu	37	2	143913162	143913162	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP26	23092	broad.mit.edu	37	5	142586820	142586820	+	Silent	SNP	G	A	A	rs79503222		TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP9	64333	broad.mit.edu	37	12	57870424	57870424	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF12	23365	broad.mit.edu	37	11	120298883	120298883	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARID3C	138715	broad.mit.edu	37	9	34623453	34623454	+	Nonsense_Mutation	DNP	GC	TT	TT			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARID5A	10865	broad.mit.edu	37	2	97217402	97217402	+	Silent	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARID5B	84159	broad.mit.edu	37	10	63661776	63661776	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARMC3	219681	broad.mit.edu	37	10	23235133	23235134	+	Missense_Mutation	DNP	CC	GA	GA			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARNTL2	56938	broad.mit.edu	37	12	27529352	27529352	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASCC3	10973	broad.mit.edu	37	6	101053528	101053528	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASPM	259266	broad.mit.edu	37	1	197072642	197072642	+	Silent	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTL	431705	broad.mit.edu	37	2	96799710	96799710	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN1	460	broad.mit.edu	37	1	176851967	176851967	+	Intron	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN2	23245	broad.mit.edu	37	9	119249597	119249597	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATF6	22926	broad.mit.edu	37	1	161816433	161816433	+	Intron	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP10A	57194	broad.mit.edu	37	15	25981180	25981180	+	Intron	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP10D	57205	broad.mit.edu	37	4	47570994	47570994	+	Silent	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP12A	479	broad.mit.edu	37	13	25266550	25266550	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1B4	23439	broad.mit.edu	37	X	119504510	119504510	+	Intron	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2A3	489	broad.mit.edu	37	17	3831506	3831506	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP4A	495	broad.mit.edu	37	19	36043857	36043857	+	Intron	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP5E	514	broad.mit.edu	37	20	57605303	57605303	+	Intron	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP8A2	51761	broad.mit.edu	37	13	26542831	26542831	+	Intron	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP8B2	57198	broad.mit.edu	37	1	154317940	154317940	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP9A	10079	broad.mit.edu	37	20	50310657	50310657	+	Intron	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AURKA	6790	broad.mit.edu	37	20	54959254	54959255	+	Intron	INS	-	AA	AA			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AXIN2	8313	broad.mit.edu	37	17	63554271	63554271	+	Nonsense_Mutation	SNP	G	T	T	rs62640025		TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AZGP1	563	broad.mit.edu	37	7	99565973	99565973	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
B4GALNT4	338707	broad.mit.edu	37	11	373108	373108	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAI3	577	broad.mit.edu	37	6	69684794	69684794	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BARD1	580	broad.mit.edu	37	2	215634076	215634076	+	Intron	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAT2L2	23215	broad.mit.edu	37	1	171561144	171561144	+	3'UTR	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCAT1	586	broad.mit.edu	37	12	25002634	25002634	+	Intron	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCL11A	53335	broad.mit.edu	37	2	60687791	60687791	+	Silent	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCLAF1	9774	broad.mit.edu	37	6	136597009	136597009	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BEND6	221336	broad.mit.edu	37	6	56869347	56869347	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BFSP2	8419	broad.mit.edu	37	3	133129417	133129417	+	Intron	DEL	T	-	-			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BIRC7	79444	broad.mit.edu	37	20	61867856	61867856	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BLVRB	645	broad.mit.edu	37	19	40957343	40957343	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMP3	651	broad.mit.edu	37	4	81967195	81967195	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BNC2	54796	broad.mit.edu	37	9	16435569	16435569	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BNC2	54796	broad.mit.edu	37	9	16552765	16552765	+	Splice_Site	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRD9	65980	broad.mit.edu	37	5	870664	870664	+	Silent	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRDT	676	broad.mit.edu	37	1	92441976	92441976	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRE	9577	broad.mit.edu	37	2	28459954	28459954	+	Intron	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRF2	55290	broad.mit.edu	37	8	37704293	37704293	+	Intron	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRMS1	25855	broad.mit.edu	37	11	66109713	66109713	+	Splice_Site	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRPF1	7862	broad.mit.edu	37	3	9788023	9788023	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRSK1	84446	broad.mit.edu	37	19	55813393	55813393	+	Intron	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRSK1	84446	broad.mit.edu	37	19	55817686	55817686	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTBD11	121551	broad.mit.edu	37	12	108051444	108051444	+	Silent	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTK	695	broad.mit.edu	37	X	100630242	100630242	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTN3A1	11119	broad.mit.edu	37	6	26410036	26410036	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTNL3	10917	broad.mit.edu	37	5	180430885	180430885	+	Intron	SNP	C	T	T	rs147204650	by1000genomes	TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTNL8	79908	broad.mit.edu	37	5	180376779	180376779	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BZRAP1	9256	broad.mit.edu	37	17	56395576	56395576	+	Intron	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf27	219793	broad.mit.edu	37	10	72539460	72539460	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf82	143379	broad.mit.edu	37	10	118423607	118423607	+	3'UTR	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf82	220042	broad.mit.edu	37	11	82625869	82625869	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf84	144097	broad.mit.edu	37	11	63586320	63586320	+	Silent	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf35	55196	broad.mit.edu	37	12	32137134	32137134	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf51	283450	broad.mit.edu	37	12	112665893	112665893	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf51	283450	broad.mit.edu	37	12	112703647	112703647	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf63	374467	broad.mit.edu	37	12	97051523	97051523	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf177	283598	broad.mit.edu	37	14	99183529	99183529	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf37	145407	broad.mit.edu	37	14	58604955	58604955	+	Silent	SNP	T	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf37	145407	broad.mit.edu	37	14	58711527	58711527	+	Intron	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf39	317761	broad.mit.edu	37	14	60903806	60903806	+	Intron	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf49	161176	broad.mit.edu	37	14	95906001	95906001	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf24	56851	broad.mit.edu	37	15	34376527	34376527	+	3'UTR	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C16orf68	79091	broad.mit.edu	37	16	8735879	8735879	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf67	339210	broad.mit.edu	37	17	54892331	54892331	+	Splice_Site	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf85	55421	broad.mit.edu	37	17	3724725	3724725	+	Intron	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C18orf62	284274	broad.mit.edu	37	18	73139189	73139189	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C19orf29	58509	broad.mit.edu	37	19	3624101	3624101	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf106	55765	broad.mit.edu	37	1	200867635	200867635	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf141	400757	broad.mit.edu	37	1	67591503	67591503	+	Silent	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf150	148823	broad.mit.edu	37	1	247712342	247712342	+	5'Flank	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf158	93190	broad.mit.edu	37	1	12819157	12819157	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf159	54991	broad.mit.edu	37	1	1019650	1019650	+	Silent	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf173	127254	broad.mit.edu	37	1	75037858	75037858	+	Missense_Mutation	SNP	C	A	A	rs76571187		TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf173	127254	broad.mit.edu	37	1	75107077	75107077	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf117	140710	broad.mit.edu	37	20	35444785	35444785	+	Intron	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf132	140699	broad.mit.edu	37	20	35783522	35783522	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf152	140894	broad.mit.edu	37	20	34596240	34596240	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf185	359710	broad.mit.edu	37	20	31651318	31651318	+	Intron	DEL	C	-	-			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf186	149954	broad.mit.edu	37	20	31671619	31671619	+	Frame_Shift_Del	DEL	G	-	-	rs2424943	byFrequency;by1000genomes	TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf194	25943	broad.mit.edu	37	20	3234358	3234358	+	Intron	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf24	55969	broad.mit.edu	37	20	35236149	35236149	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf30	29058	broad.mit.edu	37	20	5081562	5081562	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf71	128861	broad.mit.edu	37	20	31815324	31815324	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf86	51057	broad.mit.edu	37	2	63540353	63540353	+	Intron	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3	718	broad.mit.edu	37	19	6679343	6679343	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf38	285237	broad.mit.edu	37	3	88202561	88202561	+	Silent	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf58	205428	broad.mit.edu	37	3	143704422	143704422	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf22	255119	broad.mit.edu	37	4	81308395	81308395	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf22	55322	broad.mit.edu	37	5	31545876	31545877	+	Intron	DNP	TA	GT	GT			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6	729	broad.mit.edu	37	5	41154927	41154927	+	Intron	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf118	168090	broad.mit.edu	37	6	165711596	165711596	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf174	387104	broad.mit.edu	37	6	127775032	127775032	+	3'UTR	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf174	387104	broad.mit.edu	37	6	127775126	127775126	+	3'UTR	SNP	T	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf222	389384	broad.mit.edu	37	6	36285159	36285159	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf81	221481	broad.mit.edu	37	6	35716274	35716274	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7	730	broad.mit.edu	37	5	40955403	40955403	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf43	55262	broad.mit.edu	37	7	99754179	99754179	+	Intron	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf58	79974	broad.mit.edu	37	7	120774023	120774023	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf63	79846	broad.mit.edu	37	7	89874907	89874907	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8orf46	254778	broad.mit.edu	37	8	67427971	67427971	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8orf80	389643	broad.mit.edu	37	8	27898648	27898648	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CA1	759	broad.mit.edu	37	8	86240888	86240888	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CABLES1	91768	broad.mit.edu	37	18	20716572	20716572	+	Splice_Site	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1B	774	broad.mit.edu	37	9	140777551	140777552	+	Intron	INS	-	GGAA	GGAA	rs140080287	by1000genomes	TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1C	775	broad.mit.edu	37	12	2715846	2715846	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1E	777	broad.mit.edu	37	1	181707571	181707571	+	Intron	SNP	T	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1E	777	broad.mit.edu	37	1	181714587	181714587	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1E	777	broad.mit.edu	37	1	181741231	181741231	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNG7	59284	broad.mit.edu	37	19	54444824	54444824	+	Silent	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CADM2	253559	broad.mit.edu	37	3	86010811	86010811	+	Intron	DEL	G	-	-			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CADM2	253559	broad.mit.edu	37	3	86062751	86062751	+	Intron	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CADM3	57863	broad.mit.edu	37	1	159162341	159162341	+	Intron	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CADM3	57863	broad.mit.edu	37	1	159166690	159166690	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALB2	794	broad.mit.edu	37	16	71418849	71418849	+	Intron	SNP	G	T	T	rs143336859	by1000genomes	TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALCRL	10203	broad.mit.edu	37	2	188245400	188245400	+	Intron	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALCRL	10203	broad.mit.edu	37	2	188280512	188280512	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALML3	810	broad.mit.edu	37	10	5566982	5566983	+	Translation_Start_Site	DNP	CG	AT	AT			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMSAP1L1	23271	broad.mit.edu	37	1	200817337	200817337	+	Silent	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMSAP1	157922	broad.mit.edu	37	9	138715101	138715101	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMTA1	23261	broad.mit.edu	37	1	7811040	7811040	+	Intron	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPS2	84698	broad.mit.edu	37	12	75692486	75692486	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CARD11	84433	broad.mit.edu	37	7	2969713	2969713	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASP8AP2	9994	broad.mit.edu	37	6	90577282	90577282	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASQ2	845	broad.mit.edu	37	1	116243770	116243770	+	3'UTR	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASR	846	broad.mit.edu	37	3	121980969	121980969	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CBLB	868	broad.mit.edu	37	3	105464841	105464841	+	Silent	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC125	202243	broad.mit.edu	37	5	68609550	68609550	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC135	84229	broad.mit.edu	37	16	57765053	57765053	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC147	159686	broad.mit.edu	37	10	106214163	106214163	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC158	339965	broad.mit.edu	37	4	77304924	77304924	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC65	85478	broad.mit.edu	37	12	49315194	49315195	+	Missense_Mutation	DNP	CA	AT	AT			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC74B	91409	broad.mit.edu	37	2	130897872	130897872	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC7	221016	broad.mit.edu	37	10	32833293	32833293	+	Intron	SNP	A	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC83	220047	broad.mit.edu	37	11	85568570	85568570	+	Intron	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCKBR	887	broad.mit.edu	37	11	6291134	6291134	+	Silent	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCL22	6367	broad.mit.edu	37	16	57394572	57394572	+	Intron	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCM2	83605	broad.mit.edu	37	7	45108125	45108125	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCR8	1237	broad.mit.edu	37	3	39374243	39374244	+	Missense_Mutation	DNP	GC	AA	AA			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD109	135228	broad.mit.edu	37	6	74407145	74407145	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD109	135228	broad.mit.edu	37	6	74432909	74432909	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD109	135228	broad.mit.edu	37	6	74493581	74493581	+	Intron	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD163	9332	broad.mit.edu	37	12	7647635	7647635	+	Intron	SNP	A	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD1E	913	broad.mit.edu	37	1	158326777	158326777	+	3'UTR	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD244	51744	broad.mit.edu	37	1	160808796	160808796	+	Missense_Mutation	SNP	G	C	C	rs34984882	byFrequency;by1000genomes	TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD300LF	146722	broad.mit.edu	37	17	72700714	72700714	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD300LG	146894	broad.mit.edu	37	17	41939154	41939154	+	Intron	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD33	945	broad.mit.edu	37	19	51729438	51729438	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD40LG	959	broad.mit.edu	37	X	135732340	135732340	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD84	8832	broad.mit.edu	37	1	160523869	160523869	+	Silent	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD97	976	broad.mit.edu	37	19	14492287	14492287	+	5'UTR	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC45	8318	broad.mit.edu	37	22	19504462	19504462	+	Intron	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH11	1009	broad.mit.edu	37	16	64984878	64984878	+	Frame_Shift_Del	DEL	C	-	-			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH12	1010	broad.mit.edu	37	5	21882851	21882851	+	Intron	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH20	28316	broad.mit.edu	37	18	59203895	59203895	+	Intron	SNP	T	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH23	64072	broad.mit.edu	37	10	73269950	73269950	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH7	1005	broad.mit.edu	37	18	63481832	63481832	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK15	65061	broad.mit.edu	37	2	202712281	202712281	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDS1	1040	broad.mit.edu	37	4	85525672	85525672	+	Intron	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDS2	8760	broad.mit.edu	37	20	5167503	5167503	+	Intron	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEACAM18	729767	broad.mit.edu	37	19	51983903	51983903	+	Silent	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEACAM20	125931	broad.mit.edu	37	19	45029229	45029229	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEACAM8	1088	broad.mit.edu	37	19	43098829	43098829	+	Intron	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEBPE	1053	broad.mit.edu	37	14	23586879	23586879	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEBPZ	10153	broad.mit.edu	37	2	37454908	37454908	+	Frame_Shift_Del	DEL	T	-	-			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CECR1	51816	broad.mit.edu	37	22	17662300	17662300	+	3'UTR	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELF4	56853	broad.mit.edu	37	18	34854358	34854359	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELSR1	9620	broad.mit.edu	37	22	46794394	46794394	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CENPF	1063	broad.mit.edu	37	1	214819878	214819878	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP250	11190	broad.mit.edu	37	20	34060658	34060658	+	Splice_Site	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP97	79598	broad.mit.edu	37	3	101446312	101446312	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CES7	221223	broad.mit.edu	37	16	55883641	55883641	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHAT	1103	broad.mit.edu	37	10	50863504	50863504	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHCHD4	131474	broad.mit.edu	37	3	14157831	14157831	+	Intron	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD3	1107	broad.mit.edu	37	17	7797428	7797428	+	Intron	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD9	80205	broad.mit.edu	37	16	53338272	53338272	+	Silent	SNP	T	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHEK1	1111	broad.mit.edu	37	11	125499354	125499354	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHFR	55743	broad.mit.edu	37	12	133424567	133424567	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHFR	55743	broad.mit.edu	37	12	133447364	133447364	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHIT1	1118	broad.mit.edu	37	1	203185976	203185976	+	3'UTR	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHL1	10752	broad.mit.edu	37	3	440099	440099	+	Intron	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHP2	63928	broad.mit.edu	37	16	23767579	23767579	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRDL1	91851	broad.mit.edu	37	X	109931883	109931883	+	Silent	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRD	8646	broad.mit.edu	37	3	184103974	184103974	+	Intron	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRNA4	1137	broad.mit.edu	37	20	61990962	61990962	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRNA4	1137	broad.mit.edu	37	20	61991018	61991018	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRNA7	1139	broad.mit.edu	37	15	32323090	32323090	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRND	1144	broad.mit.edu	37	2	233399022	233399022	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CIB4	130106	broad.mit.edu	37	2	26805827	26805827	+	Intron	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CKAP2L	150468	broad.mit.edu	37	2	113513676	113513676	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCN1	1180	broad.mit.edu	37	7	143043905	143043905	+	Intron	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCNKB	1188	broad.mit.edu	37	1	16374726	16374726	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC10A	10462	broad.mit.edu	37	17	6981535	6981535	+	Intron	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC11A	6320	broad.mit.edu	37	19	51226833	51226833	+	Silent	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLMN	79789	broad.mit.edu	37	14	95661001	95661001	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLN3	1201	broad.mit.edu	37	16	28488912	28488912	+	Silent	SNP	G	T	T	rs1064886		TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLSTN2	64084	broad.mit.edu	37	3	140178652	140178652	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLTCL1	8218	broad.mit.edu	37	22	19168201	19168201	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLTCL1	8218	broad.mit.edu	37	22	19230160	19230160	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLVS2	134829	broad.mit.edu	37	6	123318799	123318799	+	5'UTR	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNGB3	54714	broad.mit.edu	37	8	87670873	87670873	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNKSR1	10256	broad.mit.edu	37	1	26509068	26509068	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNNM4	26504	broad.mit.edu	37	2	97427550	97427550	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTFR	1271	broad.mit.edu	37	9	34564690	34564690	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN3	5067	broad.mit.edu	37	3	74316356	74316356	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP5	129684	broad.mit.edu	37	2	125175123	125175123	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP5	129684	broad.mit.edu	37	2	125284984	125284984	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COG4	25839	broad.mit.edu	37	16	70543061	70543061	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103352648	103352648	+	Intron	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL16A1	1307	broad.mit.edu	37	1	32130907	32130907	+	Intron	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL27A1	85301	broad.mit.edu	37	9	116956756	116956756	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL3A1	1281	broad.mit.edu	37	2	189856502	189856502	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL3A1	1281	broad.mit.edu	37	2	189862452	189862452	+	Silent	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL3A1	1281	broad.mit.edu	37	2	189871741	189871741	+	Intron	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A3	1285	broad.mit.edu	37	2	228157957	228157957	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A4	1286	broad.mit.edu	37	2	227973110	227973110	+	Intron	SNP	T	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A4	1286	broad.mit.edu	37	2	227983373	227983373	+	Silent	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A5	1287	broad.mit.edu	37	X	107938500	107938500	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A2	1290	broad.mit.edu	37	2	189917592	189917592	+	Intron	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL6A1	1291	broad.mit.edu	37	21	47407630	47407630	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL6A1	1291	broad.mit.edu	37	21	47421898	47421898	+	Silent	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL9A1	1297	broad.mit.edu	37	6	70961991	70961991	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CORIN	10699	broad.mit.edu	37	4	47663813	47663813	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPA6	57094	broad.mit.edu	37	8	68430098	68430098	+	Intron	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPEB4	80315	broad.mit.edu	37	5	173376573	173376573	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPNE8	144402	broad.mit.edu	37	12	39087640	39087640	+	Frame_Shift_Del	DEL	C	-	-			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPS1	1373	broad.mit.edu	37	2	211421526	211421526	+	Silent	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPS1	1373	broad.mit.edu	37	2	211457699	211457699	+	Intron	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPS1	1373	broad.mit.edu	37	2	211504752	211504752	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPS1	1373	broad.mit.edu	37	2	211512463	211512463	+	Intron	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPT1C	126129	broad.mit.edu	37	19	50214055	50214055	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CR1L	1379	broad.mit.edu	37	1	207890857	207890857	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRCP	27297	broad.mit.edu	37	7	65617370	65617370	+	3'UTR	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CROCC	9696	broad.mit.edu	37	1	17183671	17183671	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CROCC	9696	broad.mit.edu	37	1	17279852	17279852	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CROT	54677	broad.mit.edu	37	7	87022321	87022321	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRY1	1407	broad.mit.edu	37	12	107393382	107393382	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSF2RB	1439	broad.mit.edu	37	22	37326508	37326508	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	2820078	2820078	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	2857502	2857502	+	Silent	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	2965290	2965290	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	3008972	3008972	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	3165786	3165786	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	3205575	3205575	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	3253859	3253859	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	3265427	3265427	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113267788	113267788	+	Intron	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113323244	113323244	+	Silent	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113516125	113516125	+	Silent	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113650900	113650900	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113697600	113697600	+	Intron	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113988189	113988189	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	114111174	114111174	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSN2	1447	broad.mit.edu	37	4	70822918	70822918	+	Intron	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSPG4	1464	broad.mit.edu	37	15	75982722	75982722	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CST4	1472	broad.mit.edu	37	20	23667702	23667702	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CT47B1	643311	broad.mit.edu	37	X	120008644	120008644	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA2	1496	broad.mit.edu	37	2	80136743	80136743	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA2	1496	broad.mit.edu	37	2	80389590	80389590	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA3	29119	broad.mit.edu	37	10	68526032	68526032	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNND2	1501	broad.mit.edu	37	5	11111212	11111212	+	Intron	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTTNBP2	83992	broad.mit.edu	37	7	117375301	117375301	+	Intron	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTTNBP2	83992	broad.mit.edu	37	7	117451049	117451049	+	Intron	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUBN	8029	broad.mit.edu	37	10	16878336	16878337	+	Missense_Mutation	DNP	CC	AA	AA	rs147563157		TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUBN	8029	broad.mit.edu	37	10	17168735	17168735	+	Intron	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUBN	8029	broad.mit.edu	37	10	17168738	17168738	+	Intron	SNP	T	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUL3	8452	broad.mit.edu	37	2	225367913	225367913	+	Intron	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXCL1	2919	broad.mit.edu	37	4	74735400	74735400	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXorf21	80231	broad.mit.edu	37	X	30578175	30578175	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXorf22	170063	broad.mit.edu	37	X	35993266	35993266	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP2C9	1559	broad.mit.edu	37	10	96748684	96748684	+	Silent	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP4B1	1580	broad.mit.edu	37	1	47279694	47279694	+	Missense_Mutation	SNP	G	T	T	rs139993247	byFrequency	TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYTH2	9266	broad.mit.edu	37	19	48979370	48979370	+	Intron	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYTH2	9266	broad.mit.edu	37	19	48982391	48982391	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAB2IP	153090	broad.mit.edu	37	9	124544669	124544669	+	Silent	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAOA	267012	broad.mit.edu	37	13	106142150	106142150	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAP3	7818	broad.mit.edu	37	1	155701746	155701746	+	Silent	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DARC	2532	broad.mit.edu	37	1	159175860	159175860	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DBF4B	80174	broad.mit.edu	37	17	42828116	42828116	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF8	50717	broad.mit.edu	37	1	160194778	160194778	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCC	1630	broad.mit.edu	37	18	50705378	50705378	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCDC2	51473	broad.mit.edu	37	6	24357729	24357729	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCLK3	85443	broad.mit.edu	37	3	36763072	36763072	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX18	8886	broad.mit.edu	37	2	118588360	118588360	+	3'UTR	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX25	29118	broad.mit.edu	37	11	125780518	125780518	+	Intron	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX4	54514	broad.mit.edu	37	5	55034894	55034894	+	Intron	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEFB118	117285	broad.mit.edu	37	20	29958068	29958068	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEFB132	400830	broad.mit.edu	37	20	238494	238494	+	Intron	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEGS1	8560	broad.mit.edu	37	1	224378005	224378005	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DFFB	1677	broad.mit.edu	37	1	3784374	3784374	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKK	139189	broad.mit.edu	37	X	50133404	50133405	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIDO1	11083	broad.mit.edu	37	20	61542867	61542867	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIO3	1735	broad.mit.edu	37	14	102028399	102028399	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLAT	1737	broad.mit.edu	37	11	111914147	111914148	+	Intron	INS	-	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLG1	1739	broad.mit.edu	37	3	196807848	196807848	+	Intron	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLG2	1740	broad.mit.edu	37	11	83691446	83691446	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLG4	1742	broad.mit.edu	37	17	7097767	7097767	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLG5	9231	broad.mit.edu	37	10	79571774	79571774	+	Silent	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMD	1756	broad.mit.edu	37	X	32305789	32305789	+	Silent	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMKN	93099	broad.mit.edu	37	19	36003863	36003863	+	Intron	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH10	196385	broad.mit.edu	37	12	124268489	124268489	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH10	196385	broad.mit.edu	37	12	124383367	124383367	+	Intron	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH17	8632	broad.mit.edu	37	17	76447034	76447034	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH5	1767	broad.mit.edu	37	5	13824339	13824339	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH6	1768	broad.mit.edu	37	2	84800559	84800559	+	Intron	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH6	1768	broad.mit.edu	37	2	84800859	84800859	+	Intron	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH8	1769	broad.mit.edu	37	6	38691265	38691265	+	Intron	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH8	1769	broad.mit.edu	37	6	38775449	38775449	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH8	1769	broad.mit.edu	37	6	38850818	38850818	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC13	23317	broad.mit.edu	37	3	132201289	132201289	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC13	23317	broad.mit.edu	37	3	132220239	132220239	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC14	85406	broad.mit.edu	37	12	56221691	56221699	+	In_Frame_Del	DEL	CCTGCCTGT	-	-			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC16	23341	broad.mit.edu	37	1	15888820	15888820	+	Silent	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNER	92737	broad.mit.edu	37	2	230282883	230282883	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPF2	5977	broad.mit.edu	37	11	65111563	65111563	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP10	57628	broad.mit.edu	37	2	116540089	116540089	+	Intron	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP4	1803	broad.mit.edu	37	2	162930442	162930442	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPT	1805	broad.mit.edu	37	1	168670163	168670163	+	Intron	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPYS	1807	broad.mit.edu	37	8	105456612	105456612	+	Silent	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSC2	1824	broad.mit.edu	37	18	28669614	28669614	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DST	667	broad.mit.edu	37	6	56468159	56468159	+	Intron	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DTNBP1	84062	broad.mit.edu	37	6	15524604	15524604	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUOX2	50506	broad.mit.edu	37	15	45394261	45394261	+	Intron	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP27	92235	broad.mit.edu	37	1	167095983	167095983	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUXA	503835	broad.mit.edu	37	19	57670488	57670488	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYRK1A	1859	broad.mit.edu	37	21	38853123	38853123	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYSF	8291	broad.mit.edu	37	2	71766288	71766288	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DZIP1	22873	broad.mit.edu	37	13	96277240	96277240	+	Intron	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DZIP1	22873	broad.mit.edu	37	13	96293708	96293708	+	Silent	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EBF1	1879	broad.mit.edu	37	5	158223226	158223226	+	Intron	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ECEL1	9427	broad.mit.edu	37	2	233348980	233348980	+	Intron	DEL	G	-	-			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EDARADD	128178	broad.mit.edu	37	1	236631557	236631557	+	Silent	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EDEM2	55741	broad.mit.edu	37	20	33703794	33703794	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EDN3	1908	broad.mit.edu	37	20	57897533	57897533	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EEA1	8411	broad.mit.edu	37	12	93202760	93202760	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFCAB3	146779	broad.mit.edu	37	17	60469360	60469360	+	Intron	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFHB	151651	broad.mit.edu	37	3	19959642	19959642	+	Intron	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFNB1	1947	broad.mit.edu	37	X	68060320	68060320	+	Silent	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGFLAM	133584	broad.mit.edu	37	5	38370435	38370435	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGFLAM	133584	broad.mit.edu	37	5	38445800	38445800	+	Silent	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGFR	1956	broad.mit.edu	37	7	55268110	55268110	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF2B2	8892	broad.mit.edu	37	14	75469819	75469819	+	Silent	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELAVL1	1994	broad.mit.edu	37	19	8038675	8038675	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELF2	1998	broad.mit.edu	37	4	139981626	139981626	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELK3	2004	broad.mit.edu	37	12	96641401	96641401	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELK4	2005	broad.mit.edu	37	1	205589269	205589269	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EMR2	30817	broad.mit.edu	37	19	14882983	14882983	+	Intron	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENGASE	64772	broad.mit.edu	37	17	77080396	77080396	+	Intron	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENPEP	2028	broad.mit.edu	37	4	111470659	111470659	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENTHD1	150350	broad.mit.edu	37	22	40283548	40283548	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB41L3	23136	broad.mit.edu	37	18	5397266	5397266	+	Missense_Mutation	SNP	C	A	A	rs140662824		TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB41L3	23136	broad.mit.edu	37	18	5489113	5489113	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB41L4B	54566	broad.mit.edu	37	9	111938997	111938997	+	Intron	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA1	2041	broad.mit.edu	37	7	143096454	143096454	+	Silent	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA4	2043	broad.mit.edu	37	2	222291250	222291250	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA5	2044	broad.mit.edu	37	4	66217099	66217099	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA5	2044	broad.mit.edu	37	4	66217326	66217326	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA6	285220	broad.mit.edu	37	3	96963115	96963115	+	Silent	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA8	2046	broad.mit.edu	37	1	22915542	22915542	+	Silent	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPS15L1	58513	broad.mit.edu	37	19	16503150	16503150	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPS15L1	58513	broad.mit.edu	37	19	16535930	16535930	+	Silent	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERBB4	2066	broad.mit.edu	37	2	212248650	212248650	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ETV1	2115	broad.mit.edu	37	7	13971169	13971169	+	Silent	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EVX1	2128	broad.mit.edu	37	7	27284799	27284799	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EYA4	2070	broad.mit.edu	37	6	133836379	133836379	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EYS	346007	broad.mit.edu	37	6	66013924	66013924	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EYS	346007	broad.mit.edu	37	6	66112422	66112422	+	Frame_Shift_Del	DEL	G	-	-			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F5	2153	broad.mit.edu	37	1	169484771	169484771	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F5	2153	broad.mit.edu	37	1	169515796	169515796	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM107B	83641	broad.mit.edu	37	10	14564107	14564107	+	Intron	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM10A4	145165	broad.mit.edu	37	13	50746537	50746537	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM13B	51306	broad.mit.edu	37	5	137298213	137298213	+	Intron	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM13C	220965	broad.mit.edu	37	10	61011385	61011385	+	Silent	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM171A1	221061	broad.mit.edu	37	10	15296879	15296879	+	Splice_Site	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM175A	84142	broad.mit.edu	37	4	84391519	84391519	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM188A	80013	broad.mit.edu	37	10	15821093	15821093	+	Silent	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM189A1	23359	broad.mit.edu	37	15	29526433	29526433	+	Intron	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM189B	10712	broad.mit.edu	37	1	155223710	155223710	+	Silent	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM189B	10712	broad.mit.edu	37	1	155223798	155223798	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM18B2	201158	broad.mit.edu	37	17	15406280	15406280	+	Silent	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM19A3	284467	broad.mit.edu	37	1	113264773	113264773	+	Intron	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM26E	254228	broad.mit.edu	37	6	116837191	116837191	+	3'UTR	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM38B	63895	broad.mit.edu	37	18	10691086	10691086	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM47B	170062	broad.mit.edu	37	X	34961456	34961456	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM47C	442444	broad.mit.edu	37	X	37026518	37026518	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM55A	120400	broad.mit.edu	37	11	114401032	114401032	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM57B	83723	broad.mit.edu	37	16	30041747	30041747	+	Silent	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM5B	57795	broad.mit.edu	37	1	177249519	177249519	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM5C	339479	broad.mit.edu	37	1	190233997	190233997	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM65B	9750	broad.mit.edu	37	6	25024083	25024083	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM65C	140876	broad.mit.edu	37	20	49204077	49204077	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM71D	161142	broad.mit.edu	37	14	67671667	67671667	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM71E1	112703	broad.mit.edu	37	19	50978701	50978701	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM75A6	389730	broad.mit.edu	37	9	43627756	43627756	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM81B	153643	broad.mit.edu	37	5	94727200	94727200	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM96A	84191	broad.mit.edu	37	15	64385799	64385800	+	Intron	INS	-	CTGCA	CTGCA			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FANCD2	2177	broad.mit.edu	37	3	10070424	10070424	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FANCM	57697	broad.mit.edu	37	14	45605798	45605798	+	Intron	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FASTKD1	79675	broad.mit.edu	37	2	170403036	170403036	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT2	2196	broad.mit.edu	37	5	150947284	150947284	+	Silent	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT4	79633	broad.mit.edu	37	4	126412916	126412916	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FATE1	89885	broad.mit.edu	37	X	150885995	150885995	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN1	2200	broad.mit.edu	37	15	48818226	48818226	+	Intron	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN2	2201	broad.mit.edu	37	5	127624376	127624376	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN2	2201	broad.mit.edu	37	5	127644818	127644818	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN2	2201	broad.mit.edu	37	5	127712286	127712286	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXL7	23194	broad.mit.edu	37	5	15928063	15928063	+	Silent	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO21	23014	broad.mit.edu	37	12	117595937	117595937	+	Intron	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO38	81545	broad.mit.edu	37	5	147818033	147818033	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXW10	10517	broad.mit.edu	37	17	18682202	18682202	+	Missense_Mutation	SNP	G	T	T	rs149783676	byFrequency	TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCGBP	8857	broad.mit.edu	37	19	40424077	40424077	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRL5	83416	broad.mit.edu	37	1	157485511	157485512	+	Missense_Mutation	DNP	GG	TT	TT	rs140845798	byFrequency	TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRLB	127943	broad.mit.edu	37	1	161692734	161692734	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGF21	26291	broad.mit.edu	37	19	49260247	49260247	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGFR4	2264	broad.mit.edu	37	5	176517917	176517917	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FHL5	9457	broad.mit.edu	37	6	97058635	97058635	+	Splice_Site	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FHOD3	80206	broad.mit.edu	37	18	34326842	34326842	+	Intron	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FKBP8	23770	broad.mit.edu	37	19	18649233	18649233	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLT4	2324	broad.mit.edu	37	5	180048335	180048335	+	Intron	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMN2	56776	broad.mit.edu	37	1	240370957	240370957	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMO1	2326	broad.mit.edu	37	1	171227364	171227364	+	Intron	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMO5	2330	broad.mit.edu	37	1	146685225	146685225	+	Intron	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOLH1	2346	broad.mit.edu	37	11	49179695	49179695	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOLH1	2346	broad.mit.edu	37	11	49204570	49204570	+	Intron	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXB1	27023	broad.mit.edu	37	15	60297127	60297128	+	5'UTR	DNP	GC	TT	TT			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXD2	2306	broad.mit.edu	37	1	47904171	47904171	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXI2	399823	broad.mit.edu	37	10	129536960	129536960	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXP4	116113	broad.mit.edu	37	6	41558173	41558173	+	Intron	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRAS1	80144	broad.mit.edu	37	4	79294094	79294094	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRYL	285527	broad.mit.edu	37	4	48559139	48559139	+	Intron	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRY	10129	broad.mit.edu	37	13	32868713	32868713	+	Intron	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSCB	84075	broad.mit.edu	37	14	44974853	44974853	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSCN3	29999	broad.mit.edu	37	7	127236391	127236391	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FUBP1	8880	broad.mit.edu	37	1	78425982	78425982	+	Intron	DEL	A	-	-			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FUT9	10690	broad.mit.edu	37	6	96652195	96652195	+	3'UTR	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FYB	2533	broad.mit.edu	37	5	39169741	39169741	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
G3BP1	10146	broad.mit.edu	37	5	151173720	151173720	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABBR2	9568	broad.mit.edu	37	9	101147818	101147818	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRA2	2555	broad.mit.edu	37	4	46252443	46252443	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRA3	2556	broad.mit.edu	37	X	151393489	151393489	+	Intron	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRB3	2562	broad.mit.edu	37	15	26793426	26793426	+	Intron	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRG1	2565	broad.mit.edu	37	4	46066407	46066407	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRG1	2565	broad.mit.edu	37	4	46067560	46067560	+	Silent	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRG3	2567	broad.mit.edu	37	15	27777780	27777780	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRR2	2570	broad.mit.edu	37	6	90012060	90012060	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAL3ST3	89792	broad.mit.edu	37	11	65810715	65810715	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALC	2581	broad.mit.edu	37	14	88401002	88401002	+	3'UTR	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT14	79623	broad.mit.edu	37	2	31178382	31178382	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT2	2590	broad.mit.edu	37	1	230372547	230372547	+	Intron	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALR2	8811	broad.mit.edu	37	17	74071267	74071267	+	Silent	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GANAB	23193	broad.mit.edu	37	11	62399970	62399971	+	Intron	INS	-	TA	TA			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAS2L2	246176	broad.mit.edu	37	17	34079564	34079564	+	Frame_Shift_Del	DEL	G	-	-			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAS7	8522	broad.mit.edu	37	17	9820477	9820477	+	3'UTR	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GATM	2628	broad.mit.edu	37	15	45660383	45660383	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GBE1	2632	broad.mit.edu	37	3	81626991	81626991	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCC1	79571	broad.mit.edu	37	7	127225205	127225205	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GEMIN5	25929	broad.mit.edu	37	5	154282031	154282031	+	Intron	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GFAP	2670	broad.mit.edu	37	17	42987730	42987730	+	Intron	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GFRAL	389400	broad.mit.edu	37	6	55192148	55192148	+	5'Flank	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GGNBP2	79893	broad.mit.edu	37	17	34913229	34913229	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GJB4	127534	broad.mit.edu	37	1	35227242	35227242	+	Nonsense_Mutation	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GKN1	56287	broad.mit.edu	37	2	69207975	69207975	+	3'UTR	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLI2	2736	broad.mit.edu	37	2	121747002	121747002	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNA13	10672	broad.mit.edu	37	17	63049634	63049634	+	Nonsense_Mutation	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNG11	2791	broad.mit.edu	37	7	93555330	93555330	+	Intron	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLGB1	2804	broad.mit.edu	37	3	121396085	121396085	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLIM4	27333	broad.mit.edu	37	3	167728076	167728076	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPAA1	8733	broad.mit.edu	37	8	145138042	145138042	+	Silent	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPC3	2719	broad.mit.edu	37	X	132896979	132896979	+	Intron	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR107	57720	broad.mit.edu	37	9	132889904	132889904	+	Intron	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR112	139378	broad.mit.edu	37	X	135427278	135427278	+	Silent	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR112	139378	broad.mit.edu	37	X	135431636	135431637	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR115	221393	broad.mit.edu	37	6	47676002	47676002	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR115	221393	broad.mit.edu	37	6	47676028	47676028	+	Intron	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR152	390212	broad.mit.edu	37	11	67219375	67219375	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR156	165829	broad.mit.edu	37	3	119886498	119886498	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR158	57512	broad.mit.edu	37	10	25887875	25887875	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR179	440435	broad.mit.edu	37	17	36499029	36499029	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR27	2850	broad.mit.edu	37	3	71804249	71804249	+	Frame_Shift_Del	DEL	G	-	-			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR61	83873	broad.mit.edu	37	1	110085968	110085968	+	Silent	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPRC6A	222545	broad.mit.edu	37	6	117114013	117114013	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPS1	2873	broad.mit.edu	37	17	80011140	80011140	+	Intron	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRAMD1B	57476	broad.mit.edu	37	11	123470186	123470186	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRB2	2885	broad.mit.edu	37	17	73317748	73317748	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIA4	2893	broad.mit.edu	37	11	105623602	105623602	+	Intron	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIA4	2893	broad.mit.edu	37	11	105781249	105781249	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRID1	2894	broad.mit.edu	37	10	87407311	87407312	+	Intron	DNP	CC	AA	AA			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRID1	2894	broad.mit.edu	37	10	87898572	87898572	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRID2	2895	broad.mit.edu	37	4	94343933	94343933	+	Silent	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIK3	2899	broad.mit.edu	37	1	37356618	37356619	+	Frame_Shift_Ins	INS	-	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIK4	2900	broad.mit.edu	37	11	120732880	120732880	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIP1	23426	broad.mit.edu	37	12	66814542	66814542	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIPAP1	56850	broad.mit.edu	37	X	48832429	48832429	+	Splice_Site	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM1	2911	broad.mit.edu	37	6	146720216	146720216	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTPBP8	29083	broad.mit.edu	37	3	112719871	112719871	+	3'UTR	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTSE1	51512	broad.mit.edu	37	22	46708079	46708079	+	Silent	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HACL1	26061	broad.mit.edu	37	3	15637949	15637949	+	Intron	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAMP	57817	broad.mit.edu	37	19	35775840	35775840	+	Splice_Site	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HBG2	3048	broad.mit.edu	37	11	5592930	5592930	+	Intron	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HBG2	3048	broad.mit.edu	37	11	5602039	5602039	+	Intron	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HCFC2	29915	broad.mit.edu	37	12	104474504	104474504	+	Intron	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC11	79885	broad.mit.edu	37	3	13545601	13545601	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC2	3066	broad.mit.edu	37	6	114281153	114281153	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC4	9759	broad.mit.edu	37	2	239974820	239974820	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC9	9734	broad.mit.edu	37	7	18767422	18767422	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC9	9734	broad.mit.edu	37	7	18868676	18868676	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR7B2	133558	broad.mit.edu	37	5	41009954	41009954	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HECTD1	25831	broad.mit.edu	37	14	31644054	31644054	+	Intron	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HECW1	23072	broad.mit.edu	37	7	43484383	43484383	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC5	51191	broad.mit.edu	37	4	89415296	89415296	+	Intron	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEXA	3073	broad.mit.edu	37	15	72638745	72638745	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HFM1	164045	broad.mit.edu	37	1	91740287	91740287	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HFM1	164045	broad.mit.edu	37	1	91742226	91742226	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HGFAC	3083	broad.mit.edu	37	4	3451122	3451122	+	Silent	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H1B	3009	broad.mit.edu	37	6	27835161	27835161	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIVEP2	3097	broad.mit.edu	37	6	143091689	143091690	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIVEP3	59269	broad.mit.edu	37	1	41978593	41978593	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HLA-DOA	3111	broad.mit.edu	37	6	32975070	32975070	+	Intron	DEL	G	-	-			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMBS	3145	broad.mit.edu	37	11	118963795	118963795	+	Intron	SNP	A	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMCN1	83872	broad.mit.edu	37	1	186055284	186055284	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMCN1	83872	broad.mit.edu	37	1	186114499	186114499	+	Intron	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMGCLL1	54511	broad.mit.edu	37	6	55300386	55300387	+	3'UTR	DNP	GG	TT	TT			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMOX1	3162	broad.mit.edu	37	22	35779116	35779116	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNF4A	3172	broad.mit.edu	37	20	43043117	43043117	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOOK3	84376	broad.mit.edu	37	8	42814274	42814274	+	Intron	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXA10	3206	broad.mit.edu	37	7	27213858	27213858	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXA7	3204	broad.mit.edu	37	7	27196009	27196009	+	Silent	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXB3	3213	broad.mit.edu	37	17	46628126	46628126	+	Frame_Shift_Del	DEL	G	-	-			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HP1BP3	50809	broad.mit.edu	37	1	21071530	21071530	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HPR	3250	broad.mit.edu	37	16	72110394	72110394	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HPS3	84343	broad.mit.edu	37	3	148876276	148876276	+	Intron	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HPX	3263	broad.mit.edu	37	11	6458851	6458851	+	Silent	SNP	C	A	A	rs145145967		TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRH3	11255	broad.mit.edu	37	20	60794655	60794655	+	Intron	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HS3ST5	222537	broad.mit.edu	37	6	114378677	114378677	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSD11B1	3290	broad.mit.edu	37	1	209878314	209878314	+	Silent	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSD3B2	3284	broad.mit.edu	37	1	119987983	119987983	+	3'UTR	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSP90AB1	3326	broad.mit.edu	37	6	44221076	44221076	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSP90AB2P	391634	broad.mit.edu	37	4	13338961	13338961	+	RNA	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPA5	3309	broad.mit.edu	37	9	128000853	128000853	+	Intron	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPH1	10808	broad.mit.edu	37	13	31712457	31712457	+	Intron	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HUWE1	10075	broad.mit.edu	37	X	53675171	53675171	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IBSP	3381	broad.mit.edu	37	4	88732482	88732482	+	Intron	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGF2BP1	10642	broad.mit.edu	37	17	47075138	47075138	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF1	3547	broad.mit.edu	37	X	130409258	130409258	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF3	3321	broad.mit.edu	37	1	117120124	117120124	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF9	57549	broad.mit.edu	37	1	159907588	159907588	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IK	3550	broad.mit.edu	37	5	140034245	140034245	+	Intron	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL10RA	3587	broad.mit.edu	37	11	117860272	117860272	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL10RB	3588	broad.mit.edu	37	21	34640770	34640770	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL13RA2	3598	broad.mit.edu	37	X	114242485	114242485	+	Intron	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1F9	56300	broad.mit.edu	37	2	113736305	113736305	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1RAPL2	26280	broad.mit.edu	37	X	103903796	103903796	+	Intron	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL21R	50615	broad.mit.edu	37	16	27460216	27460216	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL28B	282617	broad.mit.edu	37	19	39735416	39735416	+	Intron	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ILDR2	387597	broad.mit.edu	37	1	166892081	166892081	+	Intron	SNP	T	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IMPG1	3617	broad.mit.edu	37	6	76714945	76714945	+	Intron	SNP	A	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IMPG1	3617	broad.mit.edu	37	6	76751728	76751728	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ING5	84289	broad.mit.edu	37	2	242663121	242663121	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INPP5F	22876	broad.mit.edu	37	10	121571426	121571426	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INSC	387755	broad.mit.edu	37	11	15247164	15247164	+	Intron	SNP	C	A	A	rs7949064		TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INTU	27152	broad.mit.edu	37	4	128577741	128577741	+	Intron	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQGAP3	128239	broad.mit.edu	37	1	156501027	156501027	+	Silent	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQGAP3	128239	broad.mit.edu	37	1	156504072	156504072	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQGAP3	128239	broad.mit.edu	37	1	156504889	156504889	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQSEC3	440073	broad.mit.edu	37	12	266787	266787	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IREB2	3658	broad.mit.edu	37	15	78762866	78762866	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRF6	3664	broad.mit.edu	37	1	209974608	209974608	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRF8	3394	broad.mit.edu	37	16	85948000	85948000	+	Intron	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRS1	3667	broad.mit.edu	37	2	227660130	227660130	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRX6	79190	broad.mit.edu	37	16	55360341	55360341	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ISM1	140862	broad.mit.edu	37	20	13251398	13251398	+	Intron	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA4	3676	broad.mit.edu	37	2	182339715	182339715	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA4	3676	broad.mit.edu	37	2	182395301	182395301	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA9	3680	broad.mit.edu	37	3	37627075	37627075	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAD	3681	broad.mit.edu	37	16	31422370	31422370	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAE	3682	broad.mit.edu	37	17	3638335	3638335	+	Intron	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAX	3687	broad.mit.edu	37	16	31368274	31368274	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGB4	3691	broad.mit.edu	37	17	73736726	73736727	+	Intron	DNP	GG	TT	TT			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGB8	3696	broad.mit.edu	37	7	20418642	20418642	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITPR2	3709	broad.mit.edu	37	12	26553055	26553055	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITPRIPL1	150771	broad.mit.edu	37	2	96993504	96993504	+	Silent	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IVNS1ABP	10625	broad.mit.edu	37	1	185268723	185268723	+	Intron	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JMJD4	65094	broad.mit.edu	37	1	227922419	227922419	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JPH2	57158	broad.mit.edu	37	20	42747215	42747215	+	Silent	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JPH3	57338	broad.mit.edu	37	16	87678356	87678356	+	Frame_Shift_Del	DEL	G	-	-			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JUP	3728	broad.mit.edu	37	17	39742499	39742499	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KATNAL1	84056	broad.mit.edu	37	13	30854435	30854435	+	Intron	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KATNB1	10300	broad.mit.edu	37	16	57790064	57790064	+	Intron	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KAZ	23254	broad.mit.edu	37	1	15390181	15390181	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KBTBD4	55709	broad.mit.edu	37	11	47597273	47597273	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNA1	3736	broad.mit.edu	37	12	5020837	5020837	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNA4	3739	broad.mit.edu	37	11	30034035	30034035	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNB1	3745	broad.mit.edu	37	20	48098390	48098390	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNC2	3747	broad.mit.edu	37	12	75436824	75436824	+	Intron	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCND2	3751	broad.mit.edu	37	7	119914622	119914622	+	5'UTR	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH1	3756	broad.mit.edu	37	1	211280526	211280526	+	Intron	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH7	90134	broad.mit.edu	37	2	163292062	163292062	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH7	90134	broad.mit.edu	37	2	163361078	163361078	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNJ5	3762	broad.mit.edu	37	11	128781127	128781127	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNK2	3776	broad.mit.edu	37	1	215256635	215256635	+	5'UTR	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNS3	3790	broad.mit.edu	37	2	18112296	18112296	+	Silent	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNT2	343450	broad.mit.edu	37	1	196309513	196309513	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCTD15	79047	broad.mit.edu	37	19	34302605	34302605	+	Intron	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDELC2	143888	broad.mit.edu	37	11	108352829	108352829	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM1B	221656	broad.mit.edu	37	6	18166609	18166609	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM4C	23081	broad.mit.edu	37	9	6734942	6734942	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0317	9870	broad.mit.edu	37	14	75152410	75152410	+	Intron	SNP	T	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0355	9710	broad.mit.edu	37	19	34821190	34821190	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0556	23247	broad.mit.edu	37	16	27789146	27789146	+	Intron	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0586	9786	broad.mit.edu	37	14	58955611	58955611	+	Intron	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0802	23255	broad.mit.edu	37	18	8829067	8829068	+	Intron	DNP	GG	TT	TT			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1109	84162	broad.mit.edu	37	4	123155942	123155942	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1143	57456	broad.mit.edu	37	3	44794741	44794741	+	3'UTR	SNP	A	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1143	57456	broad.mit.edu	37	3	44794830	44794830	+	3'UTR	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1324	57535	broad.mit.edu	37	1	109735309	109735309	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1324	57535	broad.mit.edu	37	1	109740147	109740147	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1462	57608	broad.mit.edu	37	10	30317933	30317933	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1524	57650	broad.mit.edu	37	3	108285291	108285291	+	Intron	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1598	57698	broad.mit.edu	37	10	118699931	118699931	+	Intron	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1715	80856	broad.mit.edu	37	2	176858037	176858037	+	Intron	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1751	85452	broad.mit.edu	37	1	1919949	1919949	+	Splice_Site	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA2022	340533	broad.mit.edu	37	X	73960665	73960665	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF13A	63971	broad.mit.edu	37	6	17788231	17788231	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF13B	23303	broad.mit.edu	37	8	29048654	29048654	+	Intron	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF16B	55614	broad.mit.edu	37	20	16488723	16488723	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF16B	55614	broad.mit.edu	37	20	16496344	16496344	+	Intron	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF17	57576	broad.mit.edu	37	1	21009182	21009182	+	Silent	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF1A	547	broad.mit.edu	37	2	241683327	241683327	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF1A	547	broad.mit.edu	37	2	241727624	241727624	+	Silent	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF1B	23095	broad.mit.edu	37	1	10342421	10342421	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF1B	23095	broad.mit.edu	37	1	10385930	10385930	+	Intron	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF1C	10749	broad.mit.edu	37	17	4916934	4916934	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF21A	55605	broad.mit.edu	37	12	39752118	39752118	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF3A	11127	broad.mit.edu	37	5	132073047	132073047	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIR2DL1	3802	broad.mit.edu	37	19	55282211	55282212	+	Intron	DNP	CT	TG	TG			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIR2DL1	3802	broad.mit.edu	37	19	55284727	55284727	+	Intron	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIR2DL3	3804	broad.mit.edu	37	19	55270395	55270395	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIR3DX1	90011	broad.mit.edu	37	19	55046862	55046862	+	5'Flank	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIRREL2	84063	broad.mit.edu	37	19	36347997	36347997	+	5'UTR	SNP	A	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHDC4	54758	broad.mit.edu	37	16	87742853	87742853	+	Intron	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHDC5	57542	broad.mit.edu	37	12	27934199	27934199	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL20	27252	broad.mit.edu	37	1	173735509	173735509	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL22	84861	broad.mit.edu	37	22	20819222	20819222	+	Silent	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT5	3852	broad.mit.edu	37	12	52910816	52910816	+	Intron	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT74	121391	broad.mit.edu	37	12	52965672	52965672	+	Intron	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT75	9119	broad.mit.edu	37	12	52818459	52818459	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT75	9119	broad.mit.edu	37	12	52822519	52822519	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT86	3892	broad.mit.edu	37	12	52646152	52646152	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT86	3892	broad.mit.edu	37	12	52646173	52646173	+	Intron	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP11-1	337880	broad.mit.edu	37	21	32253873	32253873	+	5'UTR	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP15-1	254950	broad.mit.edu	37	21	31813044	31813044	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP15-1	254950	broad.mit.edu	37	21	31813083	31813083	+	3'UTR	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP21-2	337978	broad.mit.edu	37	21	32119528	32119528	+	5'Flank	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP5-11	440051	broad.mit.edu	37	11	71293440	71293440	+	Silent	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA2	3908	broad.mit.edu	37	6	129571288	129571289	+	Missense_Mutation	DNP	CC	AA	AA	rs112388307	byFrequency;by1000genomes	TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA2	3908	broad.mit.edu	37	6	129637115	129637115	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA2	3908	broad.mit.edu	37	6	129781320	129781320	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA2	3908	broad.mit.edu	37	6	129833584	129833584	+	Silent	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA4	3910	broad.mit.edu	37	6	112499258	112499258	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA5	3911	broad.mit.edu	37	20	60888686	60888686	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMC3	10319	broad.mit.edu	37	9	133932537	133932537	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMP2	3920	broad.mit.edu	37	X	119575734	119575734	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LASS3	204219	broad.mit.edu	37	15	100942989	100942989	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCLAT1	253558	broad.mit.edu	37	2	30756239	30756239	+	Intron	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCN9	392399	broad.mit.edu	37	9	138555139	138555139	+	5'Flank	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCN9	392399	broad.mit.edu	37	9	138556212	138556212	+	Intron	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LHX4	89884	broad.mit.edu	37	1	180243566	180243566	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LHX8	431707	broad.mit.edu	37	1	75608902	75608902	+	Silent	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMOD3	56203	broad.mit.edu	37	3	69168667	69168667	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC100129055	100129055	broad.mit.edu	37	10	38475586	38475586	+	Intron	SNP	C	A	A	rs74443117	by1000genomes	TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC349196	349196	broad.mit.edu	37	8	7215825	7215825	+	5'Flank	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC401010	401010	broad.mit.edu	37	2	132201617	132201617	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC646498	646498	broad.mit.edu	37	3	49227149	49227149	+	Intron	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC96610	96610	broad.mit.edu	37	22	22724195	22724195	+	RNA	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LONP2	83752	broad.mit.edu	37	16	48304127	48304127	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPAR3	23566	broad.mit.edu	37	1	85331262	85331262	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPHN2	23266	broad.mit.edu	37	1	81892406	81892406	+	Intron	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPHN2	23266	broad.mit.edu	37	1	82450531	82450531	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPHN3	23284	broad.mit.edu	37	4	62775373	62775373	+	Silent	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPIN3	64900	broad.mit.edu	37	20	39985905	39985905	+	Intron	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRAT	9227	broad.mit.edu	37	4	155670387	155670387	+	3'UTR	SNP	G	T	T	rs145519008	by1000genomes	TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRBA	987	broad.mit.edu	37	4	151792628	151792628	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRCH2	57631	broad.mit.edu	37	X	114357412	114357412	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRIG3	121227	broad.mit.edu	37	12	59279771	59279771	+	Intron	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRMP	4033	broad.mit.edu	37	12	25243005	25243005	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141108580	141108580	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141528458	141528458	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP2	4036	broad.mit.edu	37	2	170009461	170009461	+	Silent	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP2	4036	broad.mit.edu	37	2	170088134	170088134	+	Intron	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP5	4041	broad.mit.edu	37	11	68157558	68157558	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP5	4041	broad.mit.edu	37	11	68171004	68171004	+	Silent	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC37A3	374819	broad.mit.edu	37	17	62855619	62855619	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC43	254050	broad.mit.edu	37	12	122677577	122677577	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC4	64101	broad.mit.edu	37	7	127670726	127670726	+	5'UTR	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC7	57554	broad.mit.edu	37	1	70397085	70397085	+	Intron	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC7	57554	broad.mit.edu	37	1	70397309	70397309	+	Intron	SNP	T	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC8A	56262	broad.mit.edu	37	9	131669876	131669876	+	Nonsense_Mutation	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRFIP1	9208	broad.mit.edu	37	2	238672084	238672084	+	Silent	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRIQ3	127255	broad.mit.edu	37	1	74648512	74648512	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRTM4	80059	broad.mit.edu	37	2	76975799	76975799	+	3'UTR	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRTM4	80059	broad.mit.edu	37	2	77745883	77745883	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRTM4	80059	broad.mit.edu	37	2	77746271	77746271	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LTBP1	4052	broad.mit.edu	37	2	33359867	33359867	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LTBP1	4052	broad.mit.edu	37	2	33484577	33484577	+	Intron	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LY75	4065	broad.mit.edu	37	2	160738874	160738874	+	Intron	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYAR	55646	broad.mit.edu	37	4	4275962	4275962	+	Intron	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYAR	55646	broad.mit.edu	37	4	4283637	4283637	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYPD6B	130576	broad.mit.edu	37	2	150061878	150061878	+	Silent	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYRM2	57226	broad.mit.edu	37	6	90347537	90347537	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAB21L2	10586	broad.mit.edu	37	4	151504393	151504393	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MACF1	23499	broad.mit.edu	37	1	39781942	39781942	+	Intron	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MADD	8567	broad.mit.edu	37	11	47307001	47307001	+	Splice_Site	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAEA	10296	broad.mit.edu	37	4	1326672	1326672	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAEL	84944	broad.mit.edu	37	1	166991137	166991137	+	3'UTR	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEC1	9947	broad.mit.edu	37	X	140996176	140996176	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGED2	10916	broad.mit.edu	37	X	54841039	54841039	+	Intron	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGI2	9863	broad.mit.edu	37	7	78256629	78256629	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGI3	260425	broad.mit.edu	37	1	114189213	114189213	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGT1	84061	broad.mit.edu	37	X	77109370	77109370	+	Intron	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MALAT1	378938	broad.mit.edu	37	11	65266460	65266460	+	RNA	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAMDC4	158056	broad.mit.edu	37	9	139749013	139749013	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAOA	4128	broad.mit.edu	37	X	43592152	43592152	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K15	389840	broad.mit.edu	37	X	19380754	19380754	+	Intron	SNP	A	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K4	4216	broad.mit.edu	37	6	161530730	161530730	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPK10	5602	broad.mit.edu	37	4	87023015	87023015	+	Intron	SNP	T	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPKBP1	23005	broad.mit.edu	37	15	42109706	42109706	+	Intron	SNP	C	T	T	rs111658566		TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCH1	55016	broad.mit.edu	37	4	164534637	164534637	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCH1	55016	broad.mit.edu	37	4	164534642	164534642	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCH4	57574	broad.mit.edu	37	2	217123992	217123992	+	3'UTR	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARVELD2	153562	broad.mit.edu	37	5	68716134	68716134	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MASP1	5648	broad.mit.edu	37	3	186961390	186961390	+	Silent	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAST3	23031	broad.mit.edu	37	19	18245766	18245766	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAT2B	27430	broad.mit.edu	37	5	162939024	162939024	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MATN2	4147	broad.mit.edu	37	8	98973692	98973692	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MATN4	8785	broad.mit.edu	37	20	43929931	43929931	+	Intron	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MATN4	8785	broad.mit.edu	37	20	43933037	43933037	+	Silent	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCM6	4175	broad.mit.edu	37	2	136633884	136633884	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCOLN2	255231	broad.mit.edu	37	1	85422308	85422308	+	Intron	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED30	90390	broad.mit.edu	37	8	118543087	118543087	+	Intron	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEFV	4210	broad.mit.edu	37	16	3296480	3296480	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEIS2	4212	broad.mit.edu	37	15	37375946	37375946	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEIS3	56917	broad.mit.edu	37	19	47909680	47909680	+	Intron	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEIS3	56917	broad.mit.edu	37	19	47920559	47920559	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
METTL7B	196410	broad.mit.edu	37	12	56075950	56075950	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MFRP	83552	broad.mit.edu	37	11	119212733	119212733	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MFSD11	79157	broad.mit.edu	37	17	74770938	74770938	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAM	8972	broad.mit.edu	37	7	141763284	141763284	+	Intron	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAM	8972	broad.mit.edu	37	7	141778754	141778754	+	Intron	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGRN1	23295	broad.mit.edu	37	16	4723304	4723304	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MICAL2	9645	broad.mit.edu	37	11	12284015	12284015	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR370	442915	broad.mit.edu	37	14	101377462	101377462	+	5'Flank	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR410	574434	broad.mit.edu	37	14	101532179	101532179	+	5'Flank	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR516B1	574490	broad.mit.edu	37	19	54240008	54240008	+	5'Flank	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MKRN1	23608	broad.mit.edu	37	7	140154936	140154936	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLF1IP	79682	broad.mit.edu	37	4	185650301	185650301	+	Intron	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL3	58508	broad.mit.edu	37	7	151884727	151884727	+	Intron	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP16	4325	broad.mit.edu	37	8	89053712	89053712	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP9	4318	broad.mit.edu	37	20	44641815	44641815	+	Intron	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MON2	23041	broad.mit.edu	37	12	62965393	62965393	+	Intron	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MORC1	27136	broad.mit.edu	37	3	108778676	108778676	+	Silent	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MORF4	10934	broad.mit.edu	37	4	174537438	174537438	+	Silent	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOV10	4343	broad.mit.edu	37	1	113232654	113232654	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOV10	4343	broad.mit.edu	37	1	113242307	113242307	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPP7	143098	broad.mit.edu	37	10	28378646	28378646	+	Silent	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRC2	9902	broad.mit.edu	37	17	60768328	60768328	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRO	83876	broad.mit.edu	37	18	48342067	48342067	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPL11	65003	broad.mit.edu	37	11	66204347	66204347	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPL45	84311	broad.mit.edu	37	17	36476417	36476417	+	Intron	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MS4A6A	64231	broad.mit.edu	37	11	59945759	59945759	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSH4	4438	broad.mit.edu	37	1	76355032	76355032	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSI2	124540	broad.mit.edu	37	17	55752274	55752274	+	Intron	SNP	A	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTERFD2	130916	broad.mit.edu	37	2	242035205	242035205	+	3'UTR	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTHFD1	4522	broad.mit.edu	37	14	64902465	64902465	+	Intron	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR4	9110	broad.mit.edu	37	17	56570406	56570406	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTR	4548	broad.mit.edu	37	1	236992742	236992742	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC17	140453	broad.mit.edu	37	7	100685732	100685733	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC2	4583	broad.mit.edu	37	11	1101128	1101128	+	Silent	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUT	4594	broad.mit.edu	37	6	49403211	49403211	+	Silent	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MXRA5	25878	broad.mit.edu	37	X	3248467	3248467	+	Intron	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYBPH	4608	broad.mit.edu	37	1	203140496	203140496	+	Intron	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH10	4628	broad.mit.edu	37	17	8464929	8464929	+	Intron	SNP	T	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH11	4629	broad.mit.edu	37	16	15894004	15894004	+	Intron	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH13	8735	broad.mit.edu	37	17	10243518	10243518	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH13	8735	broad.mit.edu	37	17	10265370	10265370	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH2	4620	broad.mit.edu	37	17	10432238	10432238	+	Silent	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH3	4621	broad.mit.edu	37	17	10558331	10558331	+	Silent	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH7	4625	broad.mit.edu	37	14	23900116	23900116	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH8	4626	broad.mit.edu	37	17	10316057	10316057	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYLK	4638	broad.mit.edu	37	3	123411574	123411574	+	Intron	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYLK	4638	broad.mit.edu	37	3	123456371	123456371	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO10	4651	broad.mit.edu	37	5	16676118	16676118	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO15A	51168	broad.mit.edu	37	17	18062439	18062439	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO18A	399687	broad.mit.edu	37	17	27426587	27426587	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO18B	84700	broad.mit.edu	37	22	26164507	26164507	+	Silent	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO1B	4430	broad.mit.edu	37	2	192226895	192226895	+	Intron	SNP	A	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO3A	53904	broad.mit.edu	37	10	26463295	26463295	+	Frame_Shift_Del	DEL	A	-	-			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO3B	140469	broad.mit.edu	37	2	171260966	171260966	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO3B	140469	broad.mit.edu	37	2	171260986	171260986	+	Intron	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOCD	93649	broad.mit.edu	37	17	12666523	12666523	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYT1L	23040	broad.mit.edu	37	2	1983684	1983684	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYT1	4661	broad.mit.edu	37	20	62854570	62854570	+	Intron	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NALCN	259232	broad.mit.edu	37	13	101710333	101710333	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAT8B	51471	broad.mit.edu	37	2	73927988	73927988	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV3	89795	broad.mit.edu	37	12	78444710	78444710	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV3	89795	broad.mit.edu	37	12	78571145	78571145	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF1	55672	broad.mit.edu	37	1	16893022	16893022	+	Intron	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCAM2	4685	broad.mit.edu	37	21	22881186	22881186	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCAN	1463	broad.mit.edu	37	19	19359719	19359719	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCKAP1L	3071	broad.mit.edu	37	12	54901762	54901762	+	Intron	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCKAP1L	3071	broad.mit.edu	37	12	54925124	54925124	+	Nonsense_Mutation	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCKAP1	10787	broad.mit.edu	37	2	183859679	183859679	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCOR2	9612	broad.mit.edu	37	12	124862883	124862883	+	Silent	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDST4	64579	broad.mit.edu	37	4	115760594	115760594	+	Silent	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDST4	64579	broad.mit.edu	37	4	115760749	115760749	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDUFA11	126328	broad.mit.edu	37	19	5896936	5896936	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDUFA4	4697	broad.mit.edu	37	7	10978447	10978447	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NECAP2	55707	broad.mit.edu	37	1	16767140	16767140	+	5'Flank	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEDD4	4734	broad.mit.edu	37	15	56130693	56130694	+	Intron	INS	-	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEGR1	257194	broad.mit.edu	37	1	72740197	72740197	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEK2	4751	broad.mit.edu	37	1	211844728	211844728	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEK3	4752	broad.mit.edu	37	13	52709865	52709865	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NF1P1	440225	broad.mit.edu	37	15	22140437	22140437	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFATC1	4772	broad.mit.edu	37	18	77221374	77221374	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFATC1	4772	broad.mit.edu	37	18	77246996	77246996	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFS1	9054	broad.mit.edu	37	20	34262603	34262603	+	Intron	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NHLH1	4807	broad.mit.edu	37	1	160340530	160340530	+	Silent	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NID1	4811	broad.mit.edu	37	1	236187342	236187342	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NIPBL	25836	broad.mit.edu	37	5	36985213	36985213	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NISCH	11188	broad.mit.edu	37	3	52505828	52505828	+	Splice_Site	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NIT2	56954	broad.mit.edu	37	3	100058049	100058049	+	Silent	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP11	204801	broad.mit.edu	37	19	56303674	56303674	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP14	338323	broad.mit.edu	37	11	7064041	7064041	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP14	338323	broad.mit.edu	37	11	7079669	7079669	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP2	55655	broad.mit.edu	37	19	55508638	55508638	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP9	338321	broad.mit.edu	37	19	56249156	56249156	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOD2	64127	broad.mit.edu	37	16	50756678	50756678	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOL8	55035	broad.mit.edu	37	9	95080959	95080959	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOMO1	23420	broad.mit.edu	37	16	14989374	14989374	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOTCH4	4855	broad.mit.edu	37	6	32169153	32169153	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOTUM	147111	broad.mit.edu	37	17	79916180	79916180	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOX4	50507	broad.mit.edu	37	11	89173819	89173819	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPAT	4863	broad.mit.edu	37	11	108044602	108044602	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPHS1	4868	broad.mit.edu	37	19	36336500	36336500	+	Intron	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPNT	255743	broad.mit.edu	37	4	106861316	106861316	+	Missense_Mutation	SNP	G	C	C	rs144069851	byFrequency	TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPSR1	387129	broad.mit.edu	37	7	34724093	34724094	+	Intron	DNP	GG	TA	TA			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPSR1	387129	broad.mit.edu	37	7	34818226	34818226	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPS	594857	broad.mit.edu	37	10	129350781	129350781	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPTN	27020	broad.mit.edu	37	15	73865937	73865937	+	Intron	SNP	C	A	A	rs111249561		TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPTN	27020	broad.mit.edu	37	15	73884560	73884560	+	Intron	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPY2R	4887	broad.mit.edu	37	4	156135336	156135336	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR1H4	9971	broad.mit.edu	37	12	100928738	100928738	+	Silent	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR3C2	4306	broad.mit.edu	37	4	149357469	149357469	+	Nonsense_Mutation	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR4A3	8013	broad.mit.edu	37	9	102595811	102595811	+	Intron	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRG1	3084	broad.mit.edu	37	8	32453306	32453307	+	Intron	DNP	GG	TT	TT			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRG3	10718	broad.mit.edu	37	10	84745279	84745279	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN1	9378	broad.mit.edu	37	2	50765619	50765619	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTM	50863	broad.mit.edu	37	11	132082105	132082105	+	Intron	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTN4	59277	broad.mit.edu	37	12	96066633	96066633	+	Intron	DEL	C	-	-			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTN4	59277	broad.mit.edu	37	12	96066711	96066711	+	Intron	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTRK3	4916	broad.mit.edu	37	15	88483995	88483995	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTRK3	4916	broad.mit.edu	37	15	88726815	88726815	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUCB2	4925	broad.mit.edu	37	11	17332893	17332893	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OBFC1	79991	broad.mit.edu	37	10	105659884	105659884	+	Silent	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODAM	54959	broad.mit.edu	37	4	71068126	71068126	+	Intron	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OGFRL1	79627	broad.mit.edu	37	6	72006573	72006573	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OLFML2B	25903	broad.mit.edu	37	1	161967727	161967727	+	Silent	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OLFML2B	25903	broad.mit.edu	37	1	161987177	161987177	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPCML	4978	broad.mit.edu	37	11	132306555	132306555	+	Silent	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10A2	341276	broad.mit.edu	37	11	6891892	6891892	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10Q1	219960	broad.mit.edu	37	11	57996204	57996204	+	Silent	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10T2	128360	broad.mit.edu	37	1	158368475	158368475	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR11G2	390439	broad.mit.edu	37	14	20665955	20665955	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR11L1	391189	broad.mit.edu	37	1	248004340	248004340	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1C1	26188	broad.mit.edu	37	1	247921241	247921241	+	Silent	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2A5	393046	broad.mit.edu	37	7	143747932	143747932	+	Silent	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2AK2	391191	broad.mit.edu	37	1	248129413	248129413	+	Silent	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2AK2	391191	broad.mit.edu	37	1	248129470	248129470	+	Silent	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2B2	81697	broad.mit.edu	37	6	27880154	27880154	+	5'Flank	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2G2	81470	broad.mit.edu	37	1	247752015	247752015	+	Silent	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2G2	81470	broad.mit.edu	37	1	247752598	247752598	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L13	284521	broad.mit.edu	37	1	248138975	248138975	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L13	284521	broad.mit.edu	37	1	248262533	248262533	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L13	284521	broad.mit.edu	37	1	248263030	248263031	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L1P	26247	broad.mit.edu	37	1	248153924	248153924	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L3	391192	broad.mit.edu	37	1	248224139	248224139	+	Silent	SNP	C	T	T	rs113796306		TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L3	391192	broad.mit.edu	37	1	248224332	248224332	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2M4	26245	broad.mit.edu	37	1	248402946	248402946	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2M5	127059	broad.mit.edu	37	1	248308564	248308564	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T3	343173	broad.mit.edu	37	1	248637034	248637034	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2W5	441932	broad.mit.edu	37	1	247654812	247654812	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4A16	81327	broad.mit.edu	37	11	55111106	55111106	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4C3	256144	broad.mit.edu	37	11	48346719	48346719	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4K1	79544	broad.mit.edu	37	14	20403987	20403987	+	Silent	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4N5	390437	broad.mit.edu	37	14	20612039	20612039	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4N5	390437	broad.mit.edu	37	14	20612550	20612550	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4Q3	441669	broad.mit.edu	37	14	20215538	20215539	+	5'Flank	DNP	CC	AA	AA			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4Q3	441669	broad.mit.edu	37	14	20216093	20216094	+	Frame_Shift_Ins	INS	-	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4Q3	441669	broad.mit.edu	37	14	20216282	20216282	+	Silent	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51B2	79345	broad.mit.edu	37	11	5345488	5345488	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51B5	282763	broad.mit.edu	37	11	5509929	5509929	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51E2	81285	broad.mit.edu	37	11	4702914	4702914	+	3'UTR	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51F1	256892	broad.mit.edu	37	11	4790262	4790262	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52B6	340980	broad.mit.edu	37	11	5602329	5602329	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR56A3	390083	broad.mit.edu	37	11	5968750	5968750	+	Silent	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5AR1	219493	broad.mit.edu	37	11	56431427	56431427	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5D14	219436	broad.mit.edu	37	11	55563013	55563013	+	5'Flank	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5D14	219436	broad.mit.edu	37	11	55563765	55563765	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5D18	219438	broad.mit.edu	37	11	55587852	55587852	+	Silent	SNP	C	T	T	rs148575844		TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5H14	403273	broad.mit.edu	37	3	97868307	97868308	+	Silent	DNP	CC	AT	AT	rs146669592		TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5H15	403274	broad.mit.edu	37	3	97887756	97887756	+	Silent	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5L1	219437	broad.mit.edu	37	11	55579236	55579237	+	Missense_Mutation	DNP	GG	AA	AA			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6C1	390321	broad.mit.edu	37	12	55715313	55715313	+	Silent	SNP	A	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6K3	391114	broad.mit.edu	37	1	158687103	158687103	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR7A10	390892	broad.mit.edu	37	19	14952213	14952213	+	Silent	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8B2	26595	broad.mit.edu	37	11	124253151	124253151	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8D2	283160	broad.mit.edu	37	11	124189358	124189358	+	Silent	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8H3	390152	broad.mit.edu	37	11	55890117	55890117	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR9A4	130075	broad.mit.edu	37	7	141619029	141619029	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR9K2	441639	broad.mit.edu	37	12	55524459	55524459	+	Silent	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ORMDL3	94103	broad.mit.edu	37	17	38078941	38078941	+	Intron	DEL	G	-	-			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ORMDL3	94103	broad.mit.edu	37	17	38078966	38078966	+	Intron	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL1A	114876	broad.mit.edu	37	18	21883564	21883564	+	Intron	SNP	T	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL8	114882	broad.mit.edu	37	12	76784449	76784449	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTUD4	54726	broad.mit.edu	37	4	146059084	146059085	+	Frame_Shift_Ins	INS	-	T	T	rs138021807	by1000genomes	TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTX1	5013	broad.mit.edu	37	2	63283009	63283009	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OVCH1	341350	broad.mit.edu	37	12	29630546	29630546	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OXCT1	5019	broad.mit.edu	37	5	41853477	41853477	+	Intron	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P2RX6P	440799	broad.mit.edu	37	22	21399297	21399297	+	5'Flank	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P2RY10	27334	broad.mit.edu	37	X	78216969	78216969	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P4HB	5034	broad.mit.edu	37	17	79817264	79817264	+	Splice_Site	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PA2G4	5036	broad.mit.edu	37	12	56498385	56498385	+	5'UTR	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PABPC5	140886	broad.mit.edu	37	X	90691098	90691098	+	Silent	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PACS1	55690	broad.mit.edu	37	11	66001223	66001223	+	Intron	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PACS2	23241	broad.mit.edu	37	14	105818726	105818726	+	Silent	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PADI6	353238	broad.mit.edu	37	1	17714922	17714922	+	Missense_Mutation	SNP	C	G	G	rs113151411		TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAK7	57144	broad.mit.edu	37	20	9546831	9546831	+	Silent	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PANK1	53354	broad.mit.edu	37	10	91371758	91371758	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPPA2	60676	broad.mit.edu	37	1	176661380	176661380	+	Silent	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPSS1	9061	broad.mit.edu	37	4	108552980	108552980	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARG	8505	broad.mit.edu	37	10	51472519	51472519	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARM1	25849	broad.mit.edu	37	4	75937542	75937542	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PASD1	139135	broad.mit.edu	37	X	150844445	150844445	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAX2	5076	broad.mit.edu	37	10	102584322	102584322	+	Intron	SNP	T	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAX3	5077	broad.mit.edu	37	2	223158224	223158225	+	Intron	DNP	GG	AA	AA			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH10	57575	broad.mit.edu	37	4	134072018	134072018	+	Silent	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH10	57575	broad.mit.edu	37	4	134072783	134072783	+	Silent	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH10	57575	broad.mit.edu	37	4	134073068	134073068	+	Silent	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH11X	27328	broad.mit.edu	37	X	91368619	91368619	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH15	65217	broad.mit.edu	37	10	55582700	55582700	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH15	65217	broad.mit.edu	37	10	56077052	56077052	+	Silent	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH15	65217	broad.mit.edu	37	10	56106072	56106072	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH17	27253	broad.mit.edu	37	13	58207531	58207531	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA3	56145	broad.mit.edu	37	5	140181570	140181570	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA6	56142	broad.mit.edu	37	5	140207847	140207847	+	Silent	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA7	56141	broad.mit.edu	37	5	140215062	140215062	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB13	56123	broad.mit.edu	37	5	140593607	140593607	+	5'UTR	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB4	56131	broad.mit.edu	37	5	140503432	140503432	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB7	56129	broad.mit.edu	37	5	140552708	140552708	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB8	56128	broad.mit.edu	37	5	140559001	140559001	+	Silent	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB9	56127	broad.mit.edu	37	5	140567414	140567414	+	Silent	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB9	56127	broad.mit.edu	37	5	140567665	140567665	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA1	56114	broad.mit.edu	37	5	140710430	140710430	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA3	56112	broad.mit.edu	37	5	140725293	140725293	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA5	56110	broad.mit.edu	37	5	140745978	140745978	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGB1	56104	broad.mit.edu	37	5	140732037	140732037	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGB2	56103	broad.mit.edu	37	5	140740422	140740422	+	Silent	SNP	A	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCK1	5105	broad.mit.edu	37	20	56140288	56140289	+	Intron	DEL	GA	-	-			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDCD10	11235	broad.mit.edu	37	3	167401998	167401998	+	3'UTR	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDCD1LG2	80380	broad.mit.edu	37	9	5522722	5522722	+	Intron	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE10A	10846	broad.mit.edu	37	6	165895891	165895891	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE10A	10846	broad.mit.edu	37	6	165956914	165956914	+	Intron	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE11A	50940	broad.mit.edu	37	2	178704991	178704991	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE11A	50940	broad.mit.edu	37	2	178936786	178936786	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE1C	5137	broad.mit.edu	37	7	31913061	31913061	+	Intron	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDHA2	5161	broad.mit.edu	37	4	96762021	96762021	+	Nonsense_Mutation	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDLIM4	8572	broad.mit.edu	37	5	131606626	131606626	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDXDC1	23042	broad.mit.edu	37	16	15222123	15222123	+	Intron	SNP	T	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZD4	57595	broad.mit.edu	37	X	153069795	153069795	+	Silent	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEG3	5178	broad.mit.edu	37	19	57326770	57326770	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PET112L	5188	broad.mit.edu	37	4	152682149	152682149	+	5'Flank	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PFKFB1	5207	broad.mit.edu	37	X	54982528	54982528	+	Intron	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGM5	5239	broad.mit.edu	37	9	71006565	71006565	+	Silent	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGPEP1L	145814	broad.mit.edu	37	15	99512842	99512843	+	Missense_Mutation	DNP	CG	AA	AA			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHACTR1	221692	broad.mit.edu	37	6	13206311	13206311	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHF15	23338	broad.mit.edu	37	5	133873659	133873659	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHF20L1	51105	broad.mit.edu	37	8	133851902	133851902	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PI4K2A	55361	broad.mit.edu	37	10	99376649	99376649	+	Intron	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PICALM	8301	broad.mit.edu	37	11	85712361	85712361	+	Intron	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PID1	55022	broad.mit.edu	37	2	229890500	229890500	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3R5	23533	broad.mit.edu	37	17	8792280	8792280	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIPOX	51268	broad.mit.edu	37	17	27370472	27370472	+	Intron	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIWIL3	440822	broad.mit.edu	37	22	25153864	25153864	+	Intron	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD1L1	168507	broad.mit.edu	37	7	47840161	47840161	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD1L1	168507	broad.mit.edu	37	7	47873917	47873917	+	Intron	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD1L1	168507	broad.mit.edu	37	7	47920245	47920245	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD2L2	27039	broad.mit.edu	37	5	137235149	137235149	+	Intron	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKDREJ	10343	broad.mit.edu	37	22	46656286	46656286	+	Silent	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1	5314	broad.mit.edu	37	6	51503504	51503504	+	Intron	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1	5314	broad.mit.edu	37	6	51774352	51774352	+	Intron	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2G2F	64600	broad.mit.edu	37	1	20474888	20474888	+	Silent	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2G4A	5321	broad.mit.edu	37	1	186909161	186909161	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2G4C	8605	broad.mit.edu	37	19	48558262	48558262	+	Silent	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2R1	22925	broad.mit.edu	37	2	160862202	160862202	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLAGL2	5326	broad.mit.edu	37	20	30784356	30784356	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLAT	5327	broad.mit.edu	37	8	42044933	42044933	+	Silent	SNP	C	T	T	rs115361478	byFrequency;by1000genomes	TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLAT	5327	broad.mit.edu	37	8	42046539	42046539	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCB3	5331	broad.mit.edu	37	11	64029380	64029380	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCD4	84812	broad.mit.edu	37	2	219492736	219492736	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCL1	5334	broad.mit.edu	37	2	198949581	198949581	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCL1	5334	broad.mit.edu	37	2	198965945	198965945	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCXD1	55344	broad.mit.edu	37	X	215875	215875	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHB2	55041	broad.mit.edu	37	2	131936092	131936092	+	Intron	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHF2	79666	broad.mit.edu	37	8	96167117	96167117	+	3'UTR	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHG1	57480	broad.mit.edu	37	6	151055134	151055134	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHG2	64857	broad.mit.edu	37	19	39914084	39914084	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHH1	57475	broad.mit.edu	37	14	68042641	68042641	+	Silent	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA4	91584	broad.mit.edu	37	7	131878739	131878739	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA4	91584	broad.mit.edu	37	7	131908336	131908336	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA4	91584	broad.mit.edu	37	7	132174174	132174174	+	Silent	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNC1	10154	broad.mit.edu	37	12	94562910	94562910	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PMS2	5395	broad.mit.edu	37	7	6038962	6038962	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNLDC1	154197	broad.mit.edu	37	6	160222068	160222068	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNLIPRP1	5407	broad.mit.edu	37	10	118350659	118350659	+	Silent	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNLIPRP1	5407	broad.mit.edu	37	10	118355700	118355700	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNLIPRP2	5408	broad.mit.edu	37	10	118383456	118383456	+	Splice_Site	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNLIPRP3	119548	broad.mit.edu	37	10	118215342	118215342	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNLIP	5406	broad.mit.edu	37	10	118305772	118305772	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNLIP	5406	broad.mit.edu	37	10	118314780	118314780	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNLIP	5406	broad.mit.edu	37	10	118318690	118318690	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNPLA3	80339	broad.mit.edu	37	22	44341907	44341907	+	Intron	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POC5	134359	broad.mit.edu	37	5	74988161	74988161	+	Intron	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR2L	5441	broad.mit.edu	37	11	842516	842516	+	5'UTR	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR3B	55703	broad.mit.edu	37	12	106890686	106890686	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POM121	9883	broad.mit.edu	37	7	72413896	72413896	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POU1F1	5449	broad.mit.edu	37	3	87325585	87325585	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POU2F3	25833	broad.mit.edu	37	11	120186229	120186229	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPARGC1A	10891	broad.mit.edu	37	4	23814671	23814671	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPARGC1B	133522	broad.mit.edu	37	5	149216497	149216497	+	Missense_Mutation	SNP	G	A	A	rs45628534	byFrequency	TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPFIBP1	8496	broad.mit.edu	37	12	27835424	27835424	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPM1G	5496	broad.mit.edu	37	2	27608704	27608704	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R16B	26051	broad.mit.edu	37	20	37518060	37518060	+	Intron	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R2B	5521	broad.mit.edu	37	5	146080893	146080893	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP3CA	5530	broad.mit.edu	37	4	102004306	102004306	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPT2	9374	broad.mit.edu	37	6	32125471	32125471	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM10	56980	broad.mit.edu	37	11	129785714	129785714	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM2	7799	broad.mit.edu	37	1	14107413	14107413	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM9	56979	broad.mit.edu	37	5	23509888	23509888	+	Intron	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PREX2	80243	broad.mit.edu	37	8	68989581	68989581	+	Intron	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRG4	10216	broad.mit.edu	37	1	186270816	186270816	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRIM2	5558	broad.mit.edu	37	6	57467226	57467226	+	Intron	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKAG3	53632	broad.mit.edu	37	2	219692035	219692035	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKCA	5578	broad.mit.edu	37	17	64684432	64684432	+	Silent	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRPF8	10594	broad.mit.edu	37	17	1557163	1557163	+	Silent	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRSS36	146547	broad.mit.edu	37	16	31155184	31155184	+	Intron	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSD2	84249	broad.mit.edu	37	5	139216500	139216500	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSEN2	5664	broad.mit.edu	37	1	227073239	227073239	+	Silent	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG4	5672	broad.mit.edu	37	19	43699060	43699060	+	Intron	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG5	5673	broad.mit.edu	37	19	43674120	43674120	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG6	5675	broad.mit.edu	37	19	43520065	43520065	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG6	5675	broad.mit.edu	37	19	43579465	43579465	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG8	440533	broad.mit.edu	37	19	43258604	43258604	+	Nonsense_Mutation	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG9	5678	broad.mit.edu	37	19	43763022	43763022	+	Silent	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG9	5678	broad.mit.edu	37	19	43765798	43765798	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSKH1	5681	broad.mit.edu	37	16	67961108	67961108	+	Intron	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMA6	5687	broad.mit.edu	37	14	35782001	35782001	+	Intron	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSTPIP2	9050	broad.mit.edu	37	18	43619913	43619913	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTCD3	55037	broad.mit.edu	37	2	86358165	86358165	+	Intron	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTCHD1	139411	broad.mit.edu	37	X	23412154	23412154	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTH1R	5745	broad.mit.edu	37	3	46945140	46945140	+	Silent	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	8485784	8485784	+	Silent	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRU	10076	broad.mit.edu	37	1	29618378	29618378	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRZ1	5803	broad.mit.edu	37	7	121668644	121668644	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTTG3P	26255	broad.mit.edu	37	8	67679693	67679693	+	Nonsense_Mutation	SNP	A	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PUS7L	83448	broad.mit.edu	37	12	44130285	44130285	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PUS7L	83448	broad.mit.edu	37	12	44136349	44136349	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PVRL1	5818	broad.mit.edu	37	11	119599300	119599300	+	5'UTR	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PWP2	5822	broad.mit.edu	37	21	45534840	45534840	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PXDNL	137902	broad.mit.edu	37	8	52321066	52321066	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PXK	54899	broad.mit.edu	37	3	58383335	58383335	+	Frame_Shift_Del	DEL	T	-	-			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ProSAPiP1	9762	broad.mit.edu	37	20	3147061	3147061	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
QARS	5859	broad.mit.edu	37	3	49138082	49138082	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
QSER1	79832	broad.mit.edu	37	11	32953814	32953814	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
R3HDM1	23518	broad.mit.edu	37	2	136399364	136399364	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB22A	57403	broad.mit.edu	37	20	56928424	56928424	+	Intron	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB38	23682	broad.mit.edu	37	11	87847004	87847004	+	3'UTR	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB3GAP1	22930	broad.mit.edu	37	2	135815728	135815728	+	Intron	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB3GAP1	22930	broad.mit.edu	37	2	135872733	135872733	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB3GAP2	25782	broad.mit.edu	37	1	220345290	220345290	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RACGAP1P	83956	broad.mit.edu	37	12	45457827	45457827	+	RNA	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAE1	8480	broad.mit.edu	37	20	55949537	55949537	+	Intron	DEL	G	-	-			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAG1	5896	broad.mit.edu	37	11	36596535	36596535	+	Missense_Mutation	SNP	C	T	T	rs104894285		TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAG1	5896	broad.mit.edu	37	11	36596940	36596940	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAGE	5891	broad.mit.edu	37	14	102718263	102718263	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASA3	22821	broad.mit.edu	37	13	114792814	114792814	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASAL2	9462	broad.mit.edu	37	1	178426890	178426890	+	Silent	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASIP1	54922	broad.mit.edu	37	19	49224084	49224084	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASSF2	9770	broad.mit.edu	37	20	4770302	4770302	+	Silent	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RB1CC1	9821	broad.mit.edu	37	8	53580774	53580774	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM12	10137	broad.mit.edu	37	20	34241207	34241207	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM12	10137	broad.mit.edu	37	20	34242230	34242230	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM15	64783	broad.mit.edu	37	1	110883749	110883749	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RDX	5962	broad.mit.edu	37	11	110106875	110106875	+	Silent	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REG3A	5068	broad.mit.edu	37	2	79384669	79384669	+	Intron	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REG3A	5068	broad.mit.edu	37	2	79384785	79384785	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REG3G	130120	broad.mit.edu	37	2	79254299	79254299	+	Splice_Site	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RELN	5649	broad.mit.edu	37	7	103389916	103389916	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RELT	84957	broad.mit.edu	37	11	73101740	73101740	+	Intron	SNP	G	T	T	rs112213382		TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RELT	84957	broad.mit.edu	37	11	73103419	73103419	+	Silent	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RET	5979	broad.mit.edu	37	10	43596063	43596063	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RET	5979	broad.mit.edu	37	10	43617488	43617488	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REV3L	5980	broad.mit.edu	37	6	111685009	111685009	+	Intron	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGPD3	653489	broad.mit.edu	37	2	107032375	107032375	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS19	10287	broad.mit.edu	37	20	62707771	62707771	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS6	9628	broad.mit.edu	37	14	72925146	72925146	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHBG	57127	broad.mit.edu	37	1	156351938	156351938	+	Frame_Shift_Del	DEL	C	-	-			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHOBTB1	9886	broad.mit.edu	37	10	62634766	62634766	+	Silent	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHOBTB2	23221	broad.mit.edu	37	8	22864308	22864308	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHOD	29984	broad.mit.edu	37	11	66837915	66837915	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS2	9699	broad.mit.edu	37	8	105261642	105261642	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNASE11	122651	broad.mit.edu	37	14	21051954	21051954	+	3'UTR	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNASE11	122651	broad.mit.edu	37	14	21052309	21052309	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNASE11	122651	broad.mit.edu	37	14	21052324	21052324	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNASEH1	246243	broad.mit.edu	37	2	3597784	3597784	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF170	81790	broad.mit.edu	37	8	42725241	42725241	+	Silent	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROCK1	6093	broad.mit.edu	37	18	18586524	18586524	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROPN1L	83853	broad.mit.edu	37	5	10442407	10442408	+	Frame_Shift_Ins	INS	-	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPL10	6134	broad.mit.edu	37	X	153627776	153627776	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPL22L1	200916	broad.mit.edu	37	3	170586192	170586192	+	Intron	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPL23A	6147	broad.mit.edu	37	17	27050643	27050643	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPL27A	6157	broad.mit.edu	37	11	8706809	8706809	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPS4Y1	6192	broad.mit.edu	37	Y	2712266	2712266	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPS6KA2	6196	broad.mit.edu	37	6	166921635	166921635	+	Intron	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPS9	6203	broad.mit.edu	37	19	54705332	54705332	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUNDC3B	154661	broad.mit.edu	37	7	87459369	87459369	+	3'UTR	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUNX1T1	862	broad.mit.edu	37	8	93023355	93023355	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUSC1	23623	broad.mit.edu	37	1	155298032	155298032	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUVBL2	10856	broad.mit.edu	37	19	49513735	49513735	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237801618	237801618	+	Intron	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237942011	237942011	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237965182	237965182	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237982399	237982399	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR3	6263	broad.mit.edu	37	15	34060759	34060759	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR3	6263	broad.mit.edu	37	15	34093080	34093080	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAFB2	9667	broad.mit.edu	37	19	5616089	5616089	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SALL1	6299	broad.mit.edu	37	16	51174718	51174718	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SALL1	6299	broad.mit.edu	37	16	51175401	51175401	+	Silent	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SALL4	57167	broad.mit.edu	37	20	50408003	50408003	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMD9	54809	broad.mit.edu	37	7	92733059	92733059	+	Silent	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAPS3	55291	broad.mit.edu	37	11	68312248	68312248	+	Intron	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SASH1	23328	broad.mit.edu	37	6	148855994	148855994	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCAMP5	192683	broad.mit.edu	37	15	75310808	75310808	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCARA3	51435	broad.mit.edu	37	8	27517030	27517030	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCFD2	152579	broad.mit.edu	37	4	54231430	54231430	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCG2	7857	broad.mit.edu	37	2	224462854	224462854	+	Missense_Mutation	SNP	G	A	A	rs149957287		TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCGB1D4	404552	broad.mit.edu	37	11	62063821	62063821	+	3'UTR	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN2A	6326	broad.mit.edu	37	2	166166777	166166777	+	Intron	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN3B	55800	broad.mit.edu	37	11	123513341	123513341	+	Silent	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN5A	6331	broad.mit.edu	37	3	38597357	38597357	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDK1	221935	broad.mit.edu	37	7	4153888	4153888	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC14L1	6397	broad.mit.edu	37	17	75196633	75196633	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC31A	22872	broad.mit.edu	37	4	83784652	83784652	+	Intron	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SECISBP2L	9728	broad.mit.edu	37	15	49284799	49284799	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEH1L	81929	broad.mit.edu	37	18	12982490	12982490	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA3D	223117	broad.mit.edu	37	7	84636098	84636098	+	Intron	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA5A	9037	broad.mit.edu	37	5	9122842	9122842	+	Silent	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA6D	80031	broad.mit.edu	37	15	48057206	48057206	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEPT10	151011	broad.mit.edu	37	2	110310790	110310790	+	Silent	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINB10	5273	broad.mit.edu	37	18	61587111	61587111	+	Silent	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINB12	89777	broad.mit.edu	37	18	61223383	61223383	+	5'Flank	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINB9	5272	broad.mit.edu	37	6	2890822	2890822	+	Intron	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SF3B2	10992	broad.mit.edu	37	11	65819818	65819818	+	5'UTR	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SF4	57794	broad.mit.edu	37	19	19389590	19389590	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFRS4	6429	broad.mit.edu	37	1	29481429	29481429	+	Intron	DEL	A	-	-	rs66504457		TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFTA2	389376	broad.mit.edu	37	6	30899393	30899393	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFTPC	6440	broad.mit.edu	37	8	22020821	22020821	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGCD	6444	broad.mit.edu	37	5	156186354	156186354	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGCZ	137868	broad.mit.edu	37	8	14181709	14181710	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH2D3A	10045	broad.mit.edu	37	19	6755233	6755233	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3BP4	23677	broad.mit.edu	37	2	235951690	235951690	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHANK1	50944	broad.mit.edu	37	19	51217450	51217450	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHISA2	387914	broad.mit.edu	37	13	26620787	26620787	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC14	100049587	broad.mit.edu	37	19	52149504	52149504	+	Intron	DEL	C	-	-			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SILV	6490	broad.mit.edu	37	12	56355437	56355437	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIN3B	23309	broad.mit.edu	37	19	16973310	16973310	+	Silent	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIPA1L2	57568	broad.mit.edu	37	1	232607141	232607141	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIPA1L2	57568	broad.mit.edu	37	1	232626781	232626781	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIRPA	140885	broad.mit.edu	37	20	1915458	1915458	+	Intron	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SI	6476	broad.mit.edu	37	3	164741644	164741644	+	Intron	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SI	6476	broad.mit.edu	37	3	164767613	164767613	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC11A1	6556	broad.mit.edu	37	2	219252212	219252212	+	Intron	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A1	6557	broad.mit.edu	37	15	48537080	48537080	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A3	6559	broad.mit.edu	37	16	56906186	56906186	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A5	57468	broad.mit.edu	37	20	44663818	44663819	+	Intron	DNP	CC	AA	AA			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A8	84561	broad.mit.edu	37	3	124837603	124837603	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC13A2	9058	broad.mit.edu	37	17	26820598	26820598	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC17A8	246213	broad.mit.edu	37	12	100774686	100774686	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC18A1	6570	broad.mit.edu	37	8	20008163	20008163	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC18A1	6570	broad.mit.edu	37	8	20022502	20022502	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC18A2	6571	broad.mit.edu	37	10	119027241	119027241	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC1A2	6506	broad.mit.edu	37	11	35395945	35395945	+	Intron	DEL	T	-	-			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A11	55867	broad.mit.edu	37	11	64323733	64323733	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A13	9390	broad.mit.edu	37	3	38307398	38307398	+	Missense_Mutation	SNP	G	C	C	rs72542450	byFrequency;by1000genomes	TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A7	10864	broad.mit.edu	37	6	43269800	43269800	+	Intron	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A8	9376	broad.mit.edu	37	11	62782033	62782033	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC23A2	9962	broad.mit.edu	37	20	4837573	4837573	+	3'UTR	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC24A5	283652	broad.mit.edu	37	15	48413344	48413344	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC24A5	283652	broad.mit.edu	37	15	48426611	48426611	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A15	10166	broad.mit.edu	37	13	41382521	41382521	+	Intron	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A3	1811	broad.mit.edu	37	7	107431513	107431513	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A5	375611	broad.mit.edu	37	7	103030858	103030858	+	Intron	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC27A2	11001	broad.mit.edu	37	15	50519376	50519376	+	Splice_Site	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC27A3	11000	broad.mit.edu	37	1	153749049	153749049	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC27A5	10998	broad.mit.edu	37	19	59021298	59021298	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC27A6	28965	broad.mit.edu	37	5	128326163	128326163	+	Intron	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC28A1	9154	broad.mit.edu	37	15	85476167	85476167	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC2A10	81031	broad.mit.edu	37	20	45353679	45353679	+	Splice_Site	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC2A10	81031	broad.mit.edu	37	20	45358027	45358027	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC2A3	6515	broad.mit.edu	37	12	8085705	8085705	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC30A2	7780	broad.mit.edu	37	1	26371545	26371545	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC35B3	51000	broad.mit.edu	37	6	8428397	8428397	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC35F1	222553	broad.mit.edu	37	6	118475609	118475609	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC37A2	219855	broad.mit.edu	37	11	124954893	124954893	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC44A5	204962	broad.mit.edu	37	1	75681537	75681537	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A11	115584	broad.mit.edu	37	16	24909338	24909338	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A13	6540	broad.mit.edu	37	12	336866	336866	+	Intron	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC8A1	6546	broad.mit.edu	37	2	40657101	40657101	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC8A1	6546	broad.mit.edu	37	2	40657514	40657514	+	5'Flank	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A3R1	9368	broad.mit.edu	37	17	72758059	72758059	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A3	6550	broad.mit.edu	37	5	482784	482784	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO1A2	6579	broad.mit.edu	37	12	21446891	21446891	+	Silent	SNP	C	A	A	rs148248462		TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO1A2	6579	broad.mit.edu	37	12	21471861	21471862	+	Intron	DNP	GG	TT	TT			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT2	9353	broad.mit.edu	37	4	20619258	20619258	+	Missense_Mutation	SNP	G	C	C	rs141897818	byFrequency	TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLK	9748	broad.mit.edu	37	10	105763286	105763286	+	Splice_Site	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCA2	6595	broad.mit.edu	37	9	2116106	2116106	+	Intron	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCA4	6597	broad.mit.edu	37	19	11138617	11138617	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCA4	6597	broad.mit.edu	37	19	11144113	11144113	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMG1	23049	broad.mit.edu	37	16	18882704	18882704	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMO	6608	broad.mit.edu	37	7	128849110	128849110	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMPDL3B	27293	broad.mit.edu	37	1	28279969	28279969	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMTN	6525	broad.mit.edu	37	22	31484883	31484883	+	Silent	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMYD3	64754	broad.mit.edu	37	1	245912930	245912930	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMYD5	10322	broad.mit.edu	37	2	73449044	73449044	+	Nonsense_Mutation	SNP	G	T	T	rs140745382	byFrequency	TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNAP23	8773	broad.mit.edu	37	15	42807601	42807601	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNAP25	6616	broad.mit.edu	37	20	10273679	10273679	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNAP25	6616	broad.mit.edu	37	20	10279777	10279777	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNAPC4	6621	broad.mit.edu	37	9	139276235	139276235	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNAPC5	10302	broad.mit.edu	37	15	66786523	66786529	+	Intron	DEL	CAGATTA	-	-	rs112026486		TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNCA	6622	broad.mit.edu	37	4	90756855	90756855	+	Intron	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNCB	6620	broad.mit.edu	37	5	176053505	176053505	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD116-4	100033416	broad.mit.edu	37	15	25299556	25299556	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNRPN	6638	broad.mit.edu	37	15	25222226	25222226	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNTG1	54212	broad.mit.edu	37	8	51465601	51465601	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNTG1	54212	broad.mit.edu	37	8	51465603	51465603	+	Intron	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNTG1	54212	broad.mit.edu	37	8	51621445	51621445	+	Splice_Site	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOBP	55084	broad.mit.edu	37	6	107827660	107827660	+	Intron	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORBS3	10174	broad.mit.edu	37	8	22414373	22414373	+	Silent	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS3	22986	broad.mit.edu	37	10	106675709	106675709	+	Intron	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS3	22986	broad.mit.edu	37	10	106937982	106937982	+	Intron	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS3	22986	broad.mit.edu	37	10	106959752	106959752	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS3	22986	broad.mit.edu	37	10	106983113	106983113	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS3	22986	broad.mit.edu	37	10	107022077	107022077	+	Intron	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORL1	6653	broad.mit.edu	37	11	121429397	121429397	+	Nonsense_Mutation	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOX6	55553	broad.mit.edu	37	11	16505860	16505860	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SP110	3431	broad.mit.edu	37	2	231036855	231036855	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SP140	11262	broad.mit.edu	37	2	231177387	231177387	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPACA1	81833	broad.mit.edu	37	6	88773939	88773939	+	Splice_Site	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG16	79582	broad.mit.edu	37	2	214794784	214794784	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG7	9552	broad.mit.edu	37	17	4863846	4863846	+	Intron	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG9	9043	broad.mit.edu	37	17	49072464	49072464	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAM1	6677	broad.mit.edu	37	7	123594227	123594227	+	Silent	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATA18	132671	broad.mit.edu	37	4	52946239	52946239	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATA18	132671	broad.mit.edu	37	4	52951090	52951090	+	Silent	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATA22	84690	broad.mit.edu	37	17	3366057	3366057	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATA22	84690	broad.mit.edu	37	17	3386775	3386776	+	Intron	INS	-	TT	TT			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATA2L	124044	broad.mit.edu	37	16	89764600	89764600	+	Silent	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPCS3	60559	broad.mit.edu	37	4	177241368	177241368	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPG11	80208	broad.mit.edu	37	15	44905680	44905680	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPHKAP	80309	broad.mit.edu	37	2	229046382	229046382	+	5'Flank	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPINK1	6690	broad.mit.edu	37	5	147211011	147211011	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPOCK3	50859	broad.mit.edu	37	4	168155034	168155034	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPRYD5	84767	broad.mit.edu	37	11	55653024	55653024	+	Nonsense_Mutation	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPRYD5	84767	broad.mit.edu	37	11	55657475	55657475	+	Silent	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158609311	158609311	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTLC1	10558	broad.mit.edu	37	9	94800347	94800347	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRCIN1	80725	broad.mit.edu	37	17	36708820	36708820	+	Silent	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRGAP2	23380	broad.mit.edu	37	1	206566979	206566979	+	Silent	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRGAP2	23380	broad.mit.edu	37	1	206567047	206567047	+	Intron	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRPX	8406	broad.mit.edu	37	X	38033550	38033550	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRXN1	140809	broad.mit.edu	37	20	629553	629553	+	Silent	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSH2	85464	broad.mit.edu	37	17	28004802	28004802	+	Intron	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSPN	8082	broad.mit.edu	37	12	26377335	26377335	+	Intron	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSPO	23145	broad.mit.edu	37	7	149508907	149508907	+	Intron	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSR1	6745	broad.mit.edu	37	6	7301605	7301605	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSX3	10214	broad.mit.edu	37	X	48206898	48206898	+	Intron	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST18	9705	broad.mit.edu	37	8	53084677	53084677	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST3GAL1	6482	broad.mit.edu	37	8	134478044	134478044	+	Intron	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST3GAL3	6487	broad.mit.edu	37	1	44386499	44386499	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST6GALNAC3	256435	broad.mit.edu	37	1	76771578	76771578	+	Intron	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAU2	27067	broad.mit.edu	37	8	74526206	74526206	+	Intron	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STEAP1	26872	broad.mit.edu	37	7	89790136	89790136	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK11	6794	broad.mit.edu	37	19	1219359	1219360	+	Nonsense_Mutation	DNP	GG	TT	TT			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK36	27148	broad.mit.edu	37	2	219562476	219562476	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STON1-GTF2A1L	286749	broad.mit.edu	37	2	48872251	48872251	+	Intron	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STON2	85439	broad.mit.edu	37	14	81862171	81862171	+	Intron	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STRA8	346673	broad.mit.edu	37	7	134931137	134931137	+	Intron	SNP	A	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SULF2	55959	broad.mit.edu	37	20	46305851	46305851	+	Silent	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUPT16H	11198	broad.mit.edu	37	14	21831342	21831342	+	Intron	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUPT5H	6829	broad.mit.edu	37	19	39966846	39966846	+	Intron	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUV420H1	51111	broad.mit.edu	37	11	67925826	67925826	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUV420H1	51111	broad.mit.edu	37	11	67926156	67926156	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SV2A	9900	broad.mit.edu	37	1	149881030	149881030	+	Silent	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SVEP1	79987	broad.mit.edu	37	9	113151817	113151817	+	Silent	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SVIL	6840	broad.mit.edu	37	10	29782203	29782203	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYN3	8224	broad.mit.edu	37	22	33260911	33260911	+	Silent	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE1	23345	broad.mit.edu	37	6	152529434	152529434	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE2	23224	broad.mit.edu	37	14	64599255	64599255	+	Intron	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYPL2	284612	broad.mit.edu	37	1	110018245	110018245	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT5	6861	broad.mit.edu	37	19	55687098	55687098	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT5	6861	broad.mit.edu	37	19	55689649	55689649	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT5	6861	broad.mit.edu	37	19	55690319	55690319	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYTL5	94122	broad.mit.edu	37	X	37984667	37984667	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAAR6	319100	broad.mit.edu	37	6	132891677	132891677	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAB1	10454	broad.mit.edu	37	22	39822870	39822870	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAB2	23118	broad.mit.edu	37	6	149700627	149700627	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TACR1	6869	broad.mit.edu	37	2	75426079	75426079	+	5'UTR	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TADA1	117143	broad.mit.edu	37	1	166838565	166838565	+	Intron	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TARBP1	6894	broad.mit.edu	37	1	234563602	234563602	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAS2R46	259292	broad.mit.edu	37	12	11214459	11214459	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TASP1	55617	broad.mit.edu	37	20	13371105	13371105	+	Intron	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D21	161514	broad.mit.edu	37	15	74178875	74178875	+	Silent	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBCEL	219899	broad.mit.edu	37	11	120924346	120924346	+	Silent	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBKBP1	9755	broad.mit.edu	37	17	45776160	45776160	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBR1	10716	broad.mit.edu	37	2	162274732	162274732	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBR1	10716	broad.mit.edu	37	2	162275687	162275687	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX18	9096	broad.mit.edu	37	6	85448064	85448064	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBXAS1	6916	broad.mit.edu	37	7	139655295	139655295	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCN2	6948	broad.mit.edu	37	22	31008836	31008836	+	Intron	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCN2	6948	broad.mit.edu	37	22	31019151	31019151	+	Intron	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCTE1	202500	broad.mit.edu	37	6	44255481	44255481	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDRD1	56165	broad.mit.edu	37	10	115971459	115971459	+	Intron	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDRD1	56165	broad.mit.edu	37	10	115977387	115977387	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TECRL	253017	broad.mit.edu	37	4	65146765	65146765	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEC	7006	broad.mit.edu	37	4	48158716	48158716	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEP1	7011	broad.mit.edu	37	14	20852618	20852618	+	Missense_Mutation	SNP	C	A	A	rs147687706	byFrequency	TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEX15	56154	broad.mit.edu	37	8	30695247	30695247	+	Silent	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFAP2A	7020	broad.mit.edu	37	6	10398916	10398916	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFEC	22797	broad.mit.edu	37	7	115590856	115590856	+	Intron	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGFB1	7040	broad.mit.edu	37	19	41847787	41847787	+	Splice_Site	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGM4	7047	broad.mit.edu	37	3	44951615	44951615	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGM6	343641	broad.mit.edu	37	20	2375141	2375141	+	Silent	SNP	C	G	G	rs147506152	by1000genomes	TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TG	7038	broad.mit.edu	37	8	133941335	133941335	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TG	7038	broad.mit.edu	37	8	133941469	133941469	+	Intron	SNP	A	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THAP2	83591	broad.mit.edu	37	12	72058476	72058476	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIMM50	92609	broad.mit.edu	37	19	39978750	39978750	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TINAG	27283	broad.mit.edu	37	6	54185441	54185441	+	Splice_Site	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLK1	9874	broad.mit.edu	37	2	171910453	171910453	+	Intron	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM107	84314	broad.mit.edu	37	17	8079332	8079332	+	Nonsense_Mutation	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM132A	54972	broad.mit.edu	37	11	60703933	60703933	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM132D	121256	broad.mit.edu	37	12	129559152	129559152	+	Silent	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM30A	55754	broad.mit.edu	37	6	75969072	75969072	+	Nonsense_Mutation	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMLHE	55217	broad.mit.edu	37	X	154744018	154744018	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS15	5651	broad.mit.edu	37	21	19685299	19685299	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMTC2	160335	broad.mit.edu	37	12	83359552	83359552	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMX4	56255	broad.mit.edu	37	20	7963259	7963259	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNFRSF8	943	broad.mit.edu	37	1	12195760	12195760	+	Intron	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNFRSF9	3604	broad.mit.edu	37	1	8000139	8000139	+	Splice_Site	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNKS2	80351	broad.mit.edu	37	10	93609354	93609354	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNR	7143	broad.mit.edu	37	1	175372821	175372821	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNR	7143	broad.mit.edu	37	1	175375870	175375870	+	5'UTR	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNS3	64759	broad.mit.edu	37	7	47408930	47408930	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOMM20L	387990	broad.mit.edu	37	14	58869474	58869474	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOR1AIP1	26092	broad.mit.edu	37	1	179887338	179887338	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP53AIP1	63970	broad.mit.edu	37	11	128807310	128807310	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP53	7157	broad.mit.edu	37	17	7574003	7574003	+	Nonsense_Mutation	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP53	7157	broad.mit.edu	37	17	7577095	7577095	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPSAB1	7177	broad.mit.edu	37	16	1291632	1291632	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPST1	8460	broad.mit.edu	37	7	65821897	65821897	+	Intron	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE	7179	broad.mit.edu	37	21	10910411	10910411	+	Intron	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE	7179	broad.mit.edu	37	21	10920156	10920156	+	Silent	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE	7179	broad.mit.edu	37	21	10971254	10971254	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPX2	22974	broad.mit.edu	37	20	30363837	30363837	+	Intron	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAF3IP1	26146	broad.mit.edu	37	2	239261686	239261686	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAPPC9	83696	broad.mit.edu	37	8	141294174	141294174	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TREML3	340206	broad.mit.edu	37	6	41184894	41184894	+	RNA	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRHDE	29953	broad.mit.edu	37	12	72667204	72667204	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM48	79097	broad.mit.edu	37	11	55034974	55034974	+	Intron	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM48	79097	broad.mit.edu	37	11	55035914	55035914	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM52	84851	broad.mit.edu	37	5	180687616	180687616	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM60	166655	broad.mit.edu	37	4	165961173	165961173	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIP11	9321	broad.mit.edu	37	14	92460140	92460140	+	Intron	SNP	T	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM2	7226	broad.mit.edu	37	21	45833845	45833845	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM4	54795	broad.mit.edu	37	19	49671273	49671273	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPS1	7227	broad.mit.edu	37	8	116616041	116616041	+	Intron	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPV2	51393	broad.mit.edu	37	17	16326837	16326837	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPV2	51393	broad.mit.edu	37	17	16331614	16331614	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPV5	56302	broad.mit.edu	37	7	142625177	142625177	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRRAP	8295	broad.mit.edu	37	7	98574387	98574387	+	Silent	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSHZ3	57616	broad.mit.edu	37	19	31770490	31770490	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSIX	9383	broad.mit.edu	37	X	73045838	73045838	+	RNA	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSN	7247	broad.mit.edu	37	2	122518948	122518948	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC12	54970	broad.mit.edu	37	11	113233282	113233282	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC17	55761	broad.mit.edu	37	11	43427092	43427092	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTLL2	83887	broad.mit.edu	37	6	167754801	167754801	+	Silent	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179429980	179429980	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179432976	179432976	+	Silent	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179440938	179440938	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179446708	179446708	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179450007	179450007	+	Silent	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179468621	179468621	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179579781	179579781	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179584410	179584410	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179616645	179616645	+	Silent	SNP	A	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179647207	179647207	+	Intron	SNP	T	C	C	rs138506661	by1000genomes	TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179659835	179659835	+	Silent	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTTY23	252955	broad.mit.edu	37	Y	9745602	9745602	+	5'Flank	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUFT1	7286	broad.mit.edu	37	1	151554081	151554081	+	Intron	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TXK	7294	broad.mit.edu	37	4	48073614	48073614	+	Frame_Shift_Del	DEL	T	-	-			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TXNDC5	81567	broad.mit.edu	37	6	7904925	7904925	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBA6	55236	broad.mit.edu	37	4	68499973	68499973	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBASH3A	53347	broad.mit.edu	37	21	43862836	43862836	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE2E2	7325	broad.mit.edu	37	3	23258709	23258709	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBXN2B	137886	broad.mit.edu	37	8	59338120	59338120	+	Intron	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT1A6	54578	broad.mit.edu	37	2	234602664	234602664	+	Intron	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT1A8	54576	broad.mit.edu	37	2	234581480	234581480	+	Intron	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2A1	10941	broad.mit.edu	37	4	70460881	70460881	+	Silent	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2A3	79799	broad.mit.edu	37	4	69796477	69796477	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B10	7365	broad.mit.edu	37	4	69874726	69874726	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B10	7365	broad.mit.edu	37	4	69879759	69879759	+	Silent	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B11	10720	broad.mit.edu	37	4	70066153	70066153	+	3'UTR	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B28	54490	broad.mit.edu	37	4	70160485	70160485	+	Silent	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC119	9094	broad.mit.edu	37	17	26875598	26875598	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC5C	8633	broad.mit.edu	37	4	96106531	96106531	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC5D	137970	broad.mit.edu	37	8	35453319	35453319	+	Intron	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC5D	137970	broad.mit.edu	37	8	35583678	35583678	+	Silent	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UPP1	7378	broad.mit.edu	37	7	48142902	48142902	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH1C	10083	broad.mit.edu	37	11	17537870	17537870	+	Intron	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216166438	216166438	+	Silent	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216221778	216221778	+	Intron	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216363548	216363548	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216424522	216424522	+	Intron	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP25	29761	broad.mit.edu	37	21	17135381	17135381	+	Intron	SNP	C	G	G	rs144301175	by1000genomes	TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP29	57663	broad.mit.edu	37	19	57640419	57640419	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP32	84669	broad.mit.edu	37	17	58258063	58258063	+	Intron	SNP	T	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP44	84101	broad.mit.edu	37	12	95922551	95922551	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP6	9098	broad.mit.edu	37	17	5035824	5035824	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTP14C	9724	broad.mit.edu	37	13	52593029	52593029	+	Intron	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTP18	51096	broad.mit.edu	37	17	49362423	49362423	+	Intron	DEL	A	-	-	rs77002893		TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTP20	27340	broad.mit.edu	37	12	101731765	101731765	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTRN	7402	broad.mit.edu	37	6	144761745	144761745	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTRN	7402	broad.mit.edu	37	6	144863971	144863971	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	122893118	122893118	+	IGR	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	19027028	19027028	+	IGR	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	23688462	23688462	+	IGR	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	37233222	37233222	+	IGR	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	42746594	42746594	+	IGR	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	46187552	46187552	+	IGR	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	66929685	66929685	+	IGR	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	98510178	98510178	+	IGR	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	123811306	123811306	+	IGR	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	1824154	1824154	+	IGR	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	18686892	18686892	+	IGR	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	18932788	18932788	+	IGR	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	3441393	3441393	+	IGR	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	48441910	48441910	+	IGR	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	48454255	48454255	+	IGR	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	48548239	48548239	+	IGR	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49893446	49893446	+	IGR	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49893720	49893720	+	IGR	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49895425	49895425	+	IGR	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49898195	49898195	+	IGR	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55198309	55198309	+	IGR	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55873550	55873550	+	IGR	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	71883647	71883647	+	IGR	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	85906662	85906662	+	IGR	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	94776379	94776379	+	IGR	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	98436181	98436181	+	IGR	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	127828959	127828959	+	IGR	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	133476826	133476826	+	IGR	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	25957398	25957398	+	IGR	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	33607335	33607335	+	IGR	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	38595766	38595766	+	IGR	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	80745985	80745985	+	IGR	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	8168027	8168027	+	IGR	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	88343999	88343999	+	IGR	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	97295369	97295369	+	IGR	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	21677195	21677196	+	IGR	DNP	TG	AT	AT			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	55635037	55635037	+	IGR	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	59104717	59104717	+	IGR	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	59104930	59104930	+	IGR	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	88547923	88547923	+	IGR	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	19806848	19806848	+	IGR	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	54457972	54457972	+	IGR	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	95192740	95192740	+	IGR	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	18125384	18125384	+	IGR	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	21360670	21360670	+	IGR	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	27146387	27146387	+	IGR	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32077821	32077821	+	IGR	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32490124	32490124	+	IGR	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32616449	32616449	+	IGR	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33424725	33424725	+	IGR	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33497794	33497794	+	IGR	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33499199	33499199	+	IGR	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33605742	33605742	+	IGR	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33768094	33768094	+	IGR	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	35142549	35142549	+	IGR	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	46394178	46394178	+	IGR	SNP	A	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	59788871	59788871	+	IGR	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	16744259	16744259	+	IGR	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	20487118	20487118	+	IGR	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	40800188	40800188	+	IGR	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	52030552	52030552	+	IGR	DEL	G	-	-			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	53628862	53628862	+	IGR	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	70623596	70623596	+	IGR	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	26836996	26836996	+	IGR	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	57864674	57864674	+	IGR	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	15686687	15686687	+	IGR	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	18142395	18142395	+	IGR	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	20879181	20879181	+	IGR	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	23675808	23675808	+	IGR	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	39789327	39789327	+	IGR	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	43807554	43807554	+	IGR	SNP	A	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	55119364	55119364	+	IGR	SNP	T	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	57687484	57687484	+	IGR	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	57828863	57828863	+	IGR	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	9376851	9376851	+	IGR	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	106434383	106434383	+	IGR	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	148855840	148855842	+	IGR	DEL	GGT	-	-	rs60282471		TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149089797	149089797	+	IGR	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	151742464	151742464	+	IGR	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	153198238	153198238	+	IGR	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	157606078	157606078	+	IGR	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	158424083	158424084	+	IGR	DNP	GG	TT	TT			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	158494627	158494627	+	IGR	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	173111128	173111128	+	IGR	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	191115150	191115150	+	IGR	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	227680659	227680659	+	IGR	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	237145084	237145084	+	IGR	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	247875067	247875067	+	IGR	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	54474485	54474485	+	IGR	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	80749002	80749002	+	IGR	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	81674741	81674741	+	IGR	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	18763349	18763349	+	IGR	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	32802682	32802682	+	IGR	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	61503716	61503716	+	IGR	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	11181039	11181039	+	IGR	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	31859488	31859488	+	IGR	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	16341175	16341175	+	IGR	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	16920024	16920024	+	IGR	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	16940825	16940825	+	IGR	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	17378564	17378564	+	IGR	SNP	A	C	C	rs11533813	by1000genomes	TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	106987407	106987407	+	IGR	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	112646134	112646134	+	IGR	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	115017800	115017800	+	IGR	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	133020249	133020249	+	IGR	SNP	T	C	C	rs74485887		TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	13554994	13554994	+	IGR	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	158067509	158067510	+	IGR	DNP	GG	TT	TT			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	168572050	168572050	+	IGR	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	175175344	175175344	+	IGR	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	181738133	181738133	+	IGR	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	194141734	194141734	+	IGR	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	50106271	50106271	+	IGR	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	58478913	58478913	+	IGR	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	81424243	81424243	+	IGR	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	81424314	81424314	+	IGR	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91872909	91872910	+	IGR	DNP	GG	TT	TT			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91927217	91927217	+	IGR	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	116365301	116365301	+	IGR	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	31494860	31494860	+	IGR	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	36810355	36810355	+	IGR	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	76483537	76483537	+	IGR	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	76483844	76483844	+	IGR	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	87100336	87100336	+	IGR	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	87373115	87373115	+	IGR	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	96496553	96496553	+	IGR	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	98031219	98031219	+	IGR	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	135967540	135967540	+	IGR	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	135967948	135967948	+	IGR	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	13978986	13978986	+	IGR	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	165841950	165841950	+	IGR	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	166586532	166586532	+	IGR	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	189660504	189660504	+	IGR	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	63683952	63683952	+	IGR	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	65297133	65297133	+	IGR	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	69480331	69480331	+	IGR	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	70267520	70267520	+	IGR	SNP	A	T	T	rs111429291		TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	105751287	105751287	+	IGR	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	179360845	179360845	+	IGR	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	180409468	180409468	+	IGR	SNP	A	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	20304474	20304474	+	IGR	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	23305333	23305333	+	IGR	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	53155055	53155055	+	IGR	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	56817018	56817018	+	IGR	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	67455744	67455744	+	IGR	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	75375140	75375140	+	IGR	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	84760598	84760598	+	IGR	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	99284521	99284521	+	IGR	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	160132134	160132134	+	IGR	DEL	C	-	-			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	24002370	24002370	+	IGR	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	27979408	27979408	+	IGR	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	29231528	29231528	+	IGR	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	58446180	58446180	+	IGR	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	99623261	99623261	+	IGR	SNP	A	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	143839923	143839923	+	IGR	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	143855250	143855250	+	IGR	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	144707710	144707710	+	IGR	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	144707983	144707983	+	IGR	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	159024253	159024253	+	IGR	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	25228253	25228253	+	IGR	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	31370451	31370451	+	IGR	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	42842098	42842098	+	IGR	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	53256455	53256455	+	IGR	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	54487564	54487564	+	IGR	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	54487566	54487566	+	IGR	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	55004396	55004396	+	IGR	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	55832702	55832702	+	IGR	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	56357194	56357194	+	IGR	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	57084247	57084247	+	IGR	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	57128279	57128279	+	IGR	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	57216517	57216517	+	IGR	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	62672125	62672125	+	IGR	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63032923	63032923	+	IGR	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63459269	63459269	+	IGR	SNP	A	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	6977490	6977490	+	IGR	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	84612811	84612811	+	IGR	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	9766932	9766932	+	IGR	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	47503039	47503040	+	IGR	DNP	GG	TT	TT			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	4930377	4930377	+	IGR	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	54450510	54450510	+	IGR	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	74896979	74896979	+	IGR	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	120845200	120845200	+	IGR	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	30690125	30690125	+	IGR	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	31254291	31254291	+	IGR	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	31254489	31254490	+	IGR	DNP	CG	GA	GA			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	66836826	66836826	+	IGR	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	84674147	84674147	+	IGR	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	84675489	84675489	+	IGR	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	125298486	125298486	+	IGR	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	144712618	144712618	+	IGR	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	37400368	37400368	+	IGR	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	44336639	44336639	+	IGR	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	48300641	48300641	+	IGR	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	58011590	58011590	+	IGR	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	65581336	65581336	+	IGR	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	Y	14090914	14090914	+	IGR	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	Y	14090952	14090952	+	IGR	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAV3	10451	broad.mit.edu	37	1	108303496	108303496	+	Nonsense_Mutation	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VCAM1	7412	broad.mit.edu	37	1	101186345	101186345	+	Intron	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VGLL3	389136	broad.mit.edu	37	3	87039828	87039828	+	Frame_Shift_Del	DEL	G	-	-			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VIM	7431	broad.mit.edu	37	10	17275676	17275676	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VIT	5212	broad.mit.edu	37	2	37014216	37014216	+	Intron	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VN1R4	317703	broad.mit.edu	37	19	53770147	53770147	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13A	23230	broad.mit.edu	37	9	79918001	79918001	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13B	157680	broad.mit.edu	37	8	100115083	100115083	+	Intron	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13B	157680	broad.mit.edu	37	8	100832227	100832227	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS39	23339	broad.mit.edu	37	15	42470890	42470890	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS4B	9525	broad.mit.edu	37	18	61077680	61077680	+	Splice_Site	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VRK1	7443	broad.mit.edu	37	14	97342551	97342551	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VRK1	7443	broad.mit.edu	37	14	97347468	97347468	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VSTM2A	222008	broad.mit.edu	37	7	54610349	54610349	+	5'UTR	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WASF2	10163	broad.mit.edu	37	1	27741613	27741613	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WASL	8976	broad.mit.edu	37	7	123346396	123346396	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR11	55717	broad.mit.edu	37	10	122633524	122633524	+	Intron	SNP	A	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR16	146845	broad.mit.edu	37	17	9503448	9503448	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR33	55339	broad.mit.edu	37	2	128484486	128484486	+	Intron	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR45L	56270	broad.mit.edu	37	17	80585243	80585243	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR49	151790	broad.mit.edu	37	3	167322097	167322097	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR60	55112	broad.mit.edu	37	7	158683963	158683963	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR72	256764	broad.mit.edu	37	15	54003555	54003555	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR7	23335	broad.mit.edu	37	18	54547264	54547264	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR88	126248	broad.mit.edu	37	19	33628485	33628485	+	Intron	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WIPI2	26100	broad.mit.edu	37	7	5239290	5239290	+	Splice_Site	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WT1	7490	broad.mit.edu	37	11	32417710	32417710	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WWC2	80014	broad.mit.edu	37	4	184171164	184171164	+	Intron	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WWC2	80014	broad.mit.edu	37	4	184190176	184190176	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIRP2	129446	broad.mit.edu	37	2	168108519	168108519	+	Intron	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XKR4	114786	broad.mit.edu	37	8	56270117	56270117	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XKR4	114786	broad.mit.edu	37	8	56364860	56364860	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPOT	11260	broad.mit.edu	37	12	64814133	64814133	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XYLT1	64131	broad.mit.edu	37	16	17353089	17353089	+	Silent	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YSK4	80122	broad.mit.edu	37	2	135738353	135738353	+	Intron	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YSK4	80122	broad.mit.edu	37	2	135782085	135782086	+	Intron	DNP	CC	AA	AA			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YY1	7528	broad.mit.edu	37	14	100741126	100741126	+	Intron	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZAN	7455	broad.mit.edu	37	7	100349669	100349669	+	Silent	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZAN	7455	broad.mit.edu	37	7	100349994	100349994	+	Missense_Mutation	SNP	C	A	A	rs221829		TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB20	26137	broad.mit.edu	37	3	114070473	114070473	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB46	140685	broad.mit.edu	37	20	62420982	62420982	+	Intron	SNP	C	T	T	rs146506866	by1000genomes	TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB46	140685	broad.mit.edu	37	20	62421331	62421331	+	Silent	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3H12C	85463	broad.mit.edu	37	11	110023681	110023681	+	Nonsense_Mutation	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZCCHC16	340595	broad.mit.edu	37	X	111625389	111625389	+	Intron	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZCCHC7	84186	broad.mit.edu	37	9	37304322	37304322	+	Intron	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZCWPW2	152098	broad.mit.edu	37	3	28476564	28476564	+	Intron	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZDBF2	57683	broad.mit.edu	37	2	207173670	207173670	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZDHHC11	79844	broad.mit.edu	37	5	850557	850557	+	Missense_Mutation	SNP	G	A	A	rs145802626		TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZEB2	9839	broad.mit.edu	37	2	145157860	145157860	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFAT	57623	broad.mit.edu	37	8	135615212	135615212	+	Intron	SNP	C	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX4	79776	broad.mit.edu	37	8	77620306	77620306	+	Intron	SNP	G	T	T	rs139930164	by1000genomes	TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX4	79776	broad.mit.edu	37	8	77620318	77620318	+	Intron	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX4	79776	broad.mit.edu	37	8	77765002	77765002	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX4	79776	broad.mit.edu	37	8	77768314	77768314	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX4	79776	broad.mit.edu	37	8	77768330	77768330	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFP14	57677	broad.mit.edu	37	19	36831785	36831785	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFP42	132625	broad.mit.edu	37	4	188924650	188924650	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFP57	346171	broad.mit.edu	37	6	29643264	29643264	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFP82	284406	broad.mit.edu	37	19	36884792	36884792	+	Silent	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFYVE26	23503	broad.mit.edu	37	14	68222902	68222902	+	Intron	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZKSCAN2	342357	broad.mit.edu	37	16	25268633	25268633	+	5'UTR	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMAT1	84460	broad.mit.edu	37	X	101138621	101138621	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMYND15	84225	broad.mit.edu	37	17	4647436	4647436	+	Intron	DEL	G	-	-			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF208	7757	broad.mit.edu	37	19	22155159	22155159	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF229	7772	broad.mit.edu	37	19	44946982	44946982	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF253	56242	broad.mit.edu	37	19	20003499	20003499	+	Silent	SNP	A	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF256	10172	broad.mit.edu	37	19	58455277	58455277	+	Intron	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF2	7549	broad.mit.edu	37	2	95846078	95846078	+	Intron	DEL	G	-	-			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF326	284695	broad.mit.edu	37	1	90484244	90484244	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF331	55422	broad.mit.edu	37	19	54074759	54074759	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF33A	7581	broad.mit.edu	37	10	38343873	38343873	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF37A	7587	broad.mit.edu	37	10	38407520	38407520	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF415	55786	broad.mit.edu	37	19	53612346	53612346	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF501	115560	broad.mit.edu	37	3	44776034	44776034	+	Nonsense_Mutation	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF519	162655	broad.mit.edu	37	18	14132189	14132189	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF543	125919	broad.mit.edu	37	19	57839579	57839579	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF543	125919	broad.mit.edu	37	19	57839594	57839594	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF547	284306	broad.mit.edu	37	19	57888516	57888516	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF577	84765	broad.mit.edu	37	19	52376333	52376333	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF578	147660	broad.mit.edu	37	19	53007833	53007833	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF578	147660	broad.mit.edu	37	19	53007839	53007839	+	Intron	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF585A	199704	broad.mit.edu	37	19	37643891	37643891	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF595	152687	broad.mit.edu	37	4	53282	53282	+	5'UTR	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF597	146434	broad.mit.edu	37	16	3493189	3493189	+	5'UTR	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF607	84775	broad.mit.edu	37	19	38190487	38190487	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF614	80110	broad.mit.edu	37	19	52520455	52520455	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF648	127665	broad.mit.edu	37	1	182025857	182025857	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF649	65251	broad.mit.edu	37	19	52394116	52394116	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF658	26149	broad.mit.edu	37	9	40773112	40773112	+	Silent	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF671	79891	broad.mit.edu	37	19	58231742	58231742	+	3'UTR	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF679	168417	broad.mit.edu	37	7	63726941	63726941	+	Silent	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF679	168417	broad.mit.edu	37	7	63727024	63727024	+	Frame_Shift_Del	DEL	C	-	-	rs111583875		TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF701	55762	broad.mit.edu	37	19	53086276	53086276	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF71	58491	broad.mit.edu	37	19	57132930	57132930	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF732	654254	broad.mit.edu	37	4	265785	265785	+	Silent	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF732	654254	broad.mit.edu	37	4	284291	284291	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF737	100129842	broad.mit.edu	37	19	20736525	20736525	+	Silent	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF773	374928	broad.mit.edu	37	19	58016902	58016902	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF780B	163131	broad.mit.edu	37	19	40553220	40553220	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF804A	91752	broad.mit.edu	37	2	185803479	185803479	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF804B	219578	broad.mit.edu	37	7	88962744	88962744	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF804B	219578	broad.mit.edu	37	7	88966056	88966056	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF813	126017	broad.mit.edu	37	19	53994622	53994622	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF831	128611	broad.mit.edu	37	20	57766576	57766576	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF835	90485	broad.mit.edu	37	19	57176167	57176167	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF845	91664	broad.mit.edu	37	19	53844656	53844656	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF85	7639	broad.mit.edu	37	19	21116875	21116875	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF8	7554	broad.mit.edu	37	19	58805952	58805952	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNHIT1	10467	broad.mit.edu	37	7	100866745	100866745	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZP4	57829	broad.mit.edu	37	1	238051909	238051909	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZP4	57829	broad.mit.edu	37	1	238053192	238053192	+	Silent	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSCAN1	284312	broad.mit.edu	37	19	58557212	58557212	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZWINT	11130	broad.mit.edu	37	10	58117948	58117948	+	Intron	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZXDC	79364	broad.mit.edu	37	3	126191056	126191056	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZZZ3	26009	broad.mit.edu	37	1	78098720	78098720	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	110199839	110199839	+	Intron	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55065640	55065640	+	RNA	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	31291996	31291996	+	Intron	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	74564994	74564994	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22928126	22928126	+	Intron	SNP	C	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	23019583	23019583	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	38277948	38277948	+	Intron	SNP	T	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	25422001	25422001	+	Intron	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	74354820	74354820	+	5'Flank	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	76079311	76079311	+	5'Flank	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	21544175	21544175	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	34741060	34741060	+	5'Flank	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	20332839	20332839	+	Intron	SNP	G	C	C			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	21731297	21731297	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	25752709	25752709	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	45127986	45127987	+	5'Flank	DNP	TG	CA	CA			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	148887805	148887805	+	Intron	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	151992604	151992604	+	Intron	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	16171857	16171857	+	Intron	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	132158683	132158683	+	5'Flank	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89945589	89945589	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90049438	90049438	+	Intron	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90108837	90108838	+	Intron	DNP	TC	AA	AA			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90121564	90121564	+	Intron	SNP	T	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90212103	90212103	+	RNA	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90458046	90458046	+	Intron	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	180490550	180490550	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	180539103	180539103	+	Intron	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	95374256	95374256	+	RNA	SNP	G	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142180730	142180730	+	Intron	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	39894137	39894137	+	RNA	SNP	C	A	A			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63370027	63370027	+	Intron	SNP	A	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63370762	63370762	+	Intron	SNP	T	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	86567347	86567347	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	86568070	86568070	+	5'Flank	SNP	A	G	G			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	90747437	90747437	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4432-01A-01D-1265-08	TCGA-05-4432-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
