Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
A2BP1	54715	broad.mit.edu	37	16	6497095	6497095	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
A2BP1	54715	broad.mit.edu	37	16	6920688	6920688	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
A2BP1	54715	broad.mit.edu	37	16	7388956	7388956	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
A2BP1	54715	broad.mit.edu	37	16	7441850	7441850	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
A2BP1	54715	broad.mit.edu	37	16	7568279	7568279	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
A2M	2	broad.mit.edu	37	12	9265028	9265028	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AACS	65985	broad.mit.edu	37	12	125561192	125561192	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AADACL2	344752	broad.mit.edu	37	3	151452058	151452058	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AADACL3	126767	broad.mit.edu	37	1	12776381	12776381	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AADACL3	126767	broad.mit.edu	37	1	12785336	12785336	+	Silent	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AAK1	22848	broad.mit.edu	37	2	69771620	69771620	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AASDH	132949	broad.mit.edu	37	4	57239818	57239818	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AASS	10157	broad.mit.edu	37	7	121763262	121763262	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA10	10349	broad.mit.edu	37	17	67197662	67197662	+	Missense_Mutation	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA12	26154	broad.mit.edu	37	2	215840558	215840558	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA1	19	broad.mit.edu	37	9	107599711	107599711	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA1	19	broad.mit.edu	37	9	107607837	107607837	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA1	19	broad.mit.edu	37	9	107643834	107643834	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA4	24	broad.mit.edu	37	1	94545887	94545887	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA4	24	broad.mit.edu	37	1	94574175	94574175	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA6	23460	broad.mit.edu	37	17	67084304	67084304	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA6	23460	broad.mit.edu	37	17	67109923	67109923	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA6	23460	broad.mit.edu	37	17	67133425	67133425	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA9	10350	broad.mit.edu	37	17	66988484	66988484	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB10	23456	broad.mit.edu	37	1	229657333	229657333	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB11	8647	broad.mit.edu	37	2	169781256	169781256	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB11	8647	broad.mit.edu	37	2	169783461	169783461	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB11	8647	broad.mit.edu	37	2	169870031	169870031	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB11	8647	broad.mit.edu	37	2	169870101	169870101	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB1	5243	broad.mit.edu	37	7	87162113	87162113	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB1	5243	broad.mit.edu	37	7	87173487	87173487	+	Silent	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB1	5243	broad.mit.edu	37	7	87226482	87226482	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB5	340273	broad.mit.edu	37	7	20683184	20683184	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB5	340273	broad.mit.edu	37	7	20739693	20739693	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB5	340273	broad.mit.edu	37	7	20739716	20739716	+	Silent	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB7	22	broad.mit.edu	37	X	74362047	74362047	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB9	23457	broad.mit.edu	37	12	123434285	123434285	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC1	4363	broad.mit.edu	37	16	16161829	16161829	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC2	1244	broad.mit.edu	37	10	101553456	101553456	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC2	1244	broad.mit.edu	37	10	101571611	101571611	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC2	1244	broad.mit.edu	37	10	101611400	101611400	+	3'UTR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC4	10257	broad.mit.edu	37	13	95723580	95723580	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC4	10257	broad.mit.edu	37	13	95724142	95724142	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC5	10057	broad.mit.edu	37	3	183665123	183665123	+	Missense_Mutation	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC8	6833	broad.mit.edu	37	11	17418608	17418608	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC8	6833	broad.mit.edu	37	11	17483340	17483340	+	Silent	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC9	10060	broad.mit.edu	37	12	21997988	21997988	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCD2	225	broad.mit.edu	37	12	39994514	39994514	+	Missense_Mutation	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCE1	6059	broad.mit.edu	37	4	146042355	146042355	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCG2	9429	broad.mit.edu	37	4	89052258	89052258	+	Silent	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCG2	9429	broad.mit.edu	37	4	89149162	89149162	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCG8	64241	broad.mit.edu	37	2	44102563	44102563	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABI3BP	25890	broad.mit.edu	37	3	100497098	100497098	+	Intron	DEL	C	-	-	rs9877951	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABI3BP	25890	broad.mit.edu	37	3	100569680	100569680	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABI3BP	25890	broad.mit.edu	37	3	100660498	100660498	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABI3BP	25890	broad.mit.edu	37	3	100678775	100678775	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABLIM2	84448	broad.mit.edu	37	4	8079318	8079318	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABLIM3	22885	broad.mit.edu	37	5	148586477	148586477	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABO	28	broad.mit.edu	37	9	136137918	136137918	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABTB1	80325	broad.mit.edu	37	3	127393268	127393268	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABTB1	80325	broad.mit.edu	37	3	127398779	127398779	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACACA	31	broad.mit.edu	37	17	35506665	35506665	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACACA	31	broad.mit.edu	37	17	35518989	35518989	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACACA	31	broad.mit.edu	37	17	35520718	35520718	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACACA	31	broad.mit.edu	37	17	35564824	35564824	+	Intron	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACACB	32	broad.mit.edu	37	12	109614121	109614121	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACACB	32	broad.mit.edu	37	12	109637270	109637270	+	Silent	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACAD9	28976	broad.mit.edu	37	3	128598334	128598334	+	5'UTR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACADS	35	broad.mit.edu	37	12	121177209	121177209	+	Silent	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACAN	176	broad.mit.edu	37	15	89386683	89386683	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACAP2	23527	broad.mit.edu	37	3	195070550	195070550	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACBD6	84320	broad.mit.edu	37	1	180378592	180378592	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACCN1	40	broad.mit.edu	37	17	31366290	31366290	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACCN1	40	broad.mit.edu	37	17	31438145	31438145	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACCN1	40	broad.mit.edu	37	17	31460296	31460296	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACCN1	40	broad.mit.edu	37	17	31593913	31593913	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACCN1	40	broad.mit.edu	37	17	31779112	31779112	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACCN1	40	broad.mit.edu	37	17	31831499	31831499	+	Intron	SNP	G	T	T	rs138797967	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACCN1	40	broad.mit.edu	37	17	32088567	32088567	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACCN1	40	broad.mit.edu	37	17	32275200	32275200	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACCN2	41	broad.mit.edu	37	12	50471326	50471326	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACCN2	41	broad.mit.edu	37	12	50472760	50472760	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACCS	84680	broad.mit.edu	37	11	44092856	44092856	+	Silent	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACE2	59272	broad.mit.edu	37	X	15612862	15612862	+	Intron	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACER3	55331	broad.mit.edu	37	11	76624646	76624646	+	Intron	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACRC	93953	broad.mit.edu	37	X	70832327	70832327	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACRV1	56	broad.mit.edu	37	11	125546225	125546225	+	Intron	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSL4	2182	broad.mit.edu	37	X	108924061	108924061	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSL6	23305	broad.mit.edu	37	5	131313436	131313436	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSL6	23305	broad.mit.edu	37	5	131324067	131324067	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM2B	348158	broad.mit.edu	37	16	20563816	20563817	+	Intron	INS	-	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM2B	348158	broad.mit.edu	37	16	20575840	20575840	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM5	54988	broad.mit.edu	37	16	20432565	20432565	+	Intron	SNP	A	T	T	rs150898672	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSS3	79611	broad.mit.edu	37	12	81579414	81579414	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTC1	70	broad.mit.edu	37	15	35085457	35085457	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTL6B	51412	broad.mit.edu	37	7	100252740	100252740	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTL8	81569	broad.mit.edu	37	1	18101140	18101140	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTN1	87	broad.mit.edu	37	14	69429759	69429759	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTN2	88	broad.mit.edu	37	1	236906333	236906333	+	Silent	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTN3	89	broad.mit.edu	37	11	66323749	66323750	+	Intron	INS	-	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTR3	10096	broad.mit.edu	37	2	114684900	114684900	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTRT1	139741	broad.mit.edu	37	X	127185301	127185301	+	Nonsense_Mutation	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACVR1B	91	broad.mit.edu	37	12	52363986	52363986	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACVR1	90	broad.mit.edu	37	2	158617481	158617481	+	Missense_Mutation	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACYP2	98	broad.mit.edu	37	2	54401523	54401523	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM11	4185	broad.mit.edu	37	17	42854536	42854536	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM12	8038	broad.mit.edu	37	10	127763927	127763927	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM12	8038	broad.mit.edu	37	10	127806514	127806514	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM18	8749	broad.mit.edu	37	8	39494695	39494695	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM5P	255926	broad.mit.edu	37	8	39182786	39182786	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106276215	106276215	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106602657	106602657	+	RNA	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106667610	106667610	+	RNA	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106713709	106713709	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106745496	106745496	+	Intron	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106746610	106746610	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106774659	106774659	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106790823	106790823	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106808098	106808098	+	Intron	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106843955	106843955	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106845799	106845799	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106899058	106899058	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106926140	106926140	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM7	8756	broad.mit.edu	37	8	24357658	24357658	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM9	8754	broad.mit.edu	37	8	38961109	38961109	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMDEC1	27299	broad.mit.edu	37	8	24242021	24242021	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS12	81792	broad.mit.edu	37	5	33557732	33557732	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS12	81792	broad.mit.edu	37	5	33637734	33637734	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS12	81792	broad.mit.edu	37	5	33659970	33659970	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS12	81792	broad.mit.edu	37	5	33661943	33661943	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS12	81792	broad.mit.edu	37	5	33678844	33678844	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS16	170690	broad.mit.edu	37	5	5242371	5242371	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS17	170691	broad.mit.edu	37	15	100802542	100802542	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS18	170692	broad.mit.edu	37	16	77396100	77396100	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS18	170692	broad.mit.edu	37	16	77465545	77465545	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS19	171019	broad.mit.edu	37	5	128983636	128983636	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS3	9508	broad.mit.edu	37	4	73188685	73188685	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS3	9508	broad.mit.edu	37	4	73275037	73275037	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS5	11096	broad.mit.edu	37	21	28307047	28307047	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS6	11174	broad.mit.edu	37	5	64452756	64452756	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS9	56999	broad.mit.edu	37	3	64592756	64592756	+	Splice_Site	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTSL1	92949	broad.mit.edu	37	9	18486808	18486808	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTSL1	92949	broad.mit.edu	37	9	18528512	18528512	+	Intron	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTSL1	92949	broad.mit.edu	37	9	18680585	18680585	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTSL3	57188	broad.mit.edu	37	15	84637949	84637949	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADARB1	104	broad.mit.edu	37	21	46591709	46591709	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAR	103	broad.mit.edu	37	1	154574329	154574329	+	Silent	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCK1	57143	broad.mit.edu	37	14	78392145	78392145	+	Silent	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY10	55811	broad.mit.edu	37	1	167791624	167791624	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY2	108	broad.mit.edu	37	5	7690798	7690798	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY2	108	broad.mit.edu	37	5	7707973	7707973	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY2	108	broad.mit.edu	37	5	7743815	7743815	+	Missense_Mutation	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY8	114	broad.mit.edu	37	8	132022325	132022325	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCYAP1R1	117	broad.mit.edu	37	7	31124493	31124493	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADC	113451	broad.mit.edu	37	1	33549534	33549534	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADD2	119	broad.mit.edu	37	2	70847294	70847294	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADD2	119	broad.mit.edu	37	2	70980546	70980547	+	Intron	DNP	GG	CT	CT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADH1A	124	broad.mit.edu	37	4	100203866	100203866	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADIG	149685	broad.mit.edu	37	20	37214652	37214652	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADORA1	134	broad.mit.edu	37	1	203134370	203134370	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADRA1A	148	broad.mit.edu	37	8	26705233	26705233	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADRA2C	152	broad.mit.edu	37	4	3768696	3768696	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADRB3	155	broad.mit.edu	37	8	37823637	37823637	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFAP1L1	134265	broad.mit.edu	37	5	148679077	148679077	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFAP1L2	84632	broad.mit.edu	37	10	116146894	116146894	+	Intron	SNP	G	A	A	rs150088246	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFF2	2334	broad.mit.edu	37	X	147714613	147714613	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFF2	2334	broad.mit.edu	37	X	147742059	147742059	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFF2	2334	broad.mit.edu	37	X	147749602	147749602	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFF2	2334	broad.mit.edu	37	X	147825720	147825720	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFF2	2334	broad.mit.edu	37	X	147882230	147882230	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFF2	2334	broad.mit.edu	37	X	147883301	147883301	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFF2	2334	broad.mit.edu	37	X	147967464	147967464	+	Silent	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFF2	2334	broad.mit.edu	37	X	148028727	148028727	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFF2	2334	broad.mit.edu	37	X	148039689	148039689	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFF3	3899	broad.mit.edu	37	2	100454117	100454117	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGBL1	123624	broad.mit.edu	37	15	86801284	86801284	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGBL1	123624	broad.mit.edu	37	15	86875137	86875137	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGBL1	123624	broad.mit.edu	37	15	86915447	86915447	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGBL1	123624	broad.mit.edu	37	15	87089366	87089366	+	Splice_Site	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGBL1	123624	broad.mit.edu	37	15	87123735	87123735	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGBL1	123624	broad.mit.edu	37	15	87258528	87258528	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGBL1	123624	broad.mit.edu	37	15	87564381	87564381	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGBL4	84871	broad.mit.edu	37	1	49304770	49304770	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGBL4	84871	broad.mit.edu	37	1	49332702	49332702	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGBL4	84871	broad.mit.edu	37	1	49532640	49532640	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGBL4	84871	broad.mit.edu	37	1	49717161	49717161	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGBL4	84871	broad.mit.edu	37	1	50031596	50031596	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGBL4	84871	broad.mit.edu	37	1	50307768	50307768	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGT	183	broad.mit.edu	37	1	230845573	230845573	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGXT2	64902	broad.mit.edu	37	5	35044962	35044962	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHI1	54806	broad.mit.edu	37	6	135750970	135750970	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AIDA	64853	broad.mit.edu	37	1	222867046	222867046	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AIFM1	9131	broad.mit.edu	37	X	129267393	129267393	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AJAP1	55966	broad.mit.edu	37	1	4772112	4772112	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AK5	26289	broad.mit.edu	37	1	77985439	77985439	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AK7	122481	broad.mit.edu	37	14	96871097	96871097	+	Missense_Mutation	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AK7	122481	broad.mit.edu	37	14	96944912	96944912	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AK7	122481	broad.mit.edu	37	14	96953461	96953461	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKAP10	11216	broad.mit.edu	37	17	19813326	19813326	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKAP14	158798	broad.mit.edu	37	X	119048974	119048974	+	Intron	SNP	C	A	A	rs7876933	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKAP4	8852	broad.mit.edu	37	X	49958251	49958251	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKAP6	9472	broad.mit.edu	37	14	32911785	32911785	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKAP9	10142	broad.mit.edu	37	7	91632045	91632045	+	Silent	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKR1B10	57016	broad.mit.edu	37	7	134212696	134212696	+	Silent	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKR1B10	57016	broad.mit.edu	37	7	134223009	134223009	+	Missense_Mutation	SNP	C	A	A	rs142388608		TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKR1B10	57016	broad.mit.edu	37	7	134225909	134225909	+	3'UTR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKR1B15	441282	broad.mit.edu	37	7	134231709	134231709	+	5'Flank	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKR1B15	441282	broad.mit.edu	37	7	134261936	134261936	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKR1B1	231	broad.mit.edu	37	7	134132818	134132818	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKR1B1	231	broad.mit.edu	37	7	134136430	134136430	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKR1D1	6718	broad.mit.edu	37	7	137736397	137736397	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKR1E2	83592	broad.mit.edu	37	10	4873103	4873103	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKT2	208	broad.mit.edu	37	19	40771226	40771226	+	5'UTR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKT3	10000	broad.mit.edu	37	1	243946696	243946696	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALCAM	214	broad.mit.edu	37	3	105262738	105262738	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH1A2	8854	broad.mit.edu	37	15	58257750	58257750	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH1L1	10840	broad.mit.edu	37	3	125850393	125850393	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALG13	79868	broad.mit.edu	37	X	110927881	110927881	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALG13	79868	broad.mit.edu	37	X	110951803	110951803	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALK	238	broad.mit.edu	37	2	29606490	29606490	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALK	238	broad.mit.edu	37	2	29745232	29745232	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALK	238	broad.mit.edu	37	2	29751157	29751157	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALK	238	broad.mit.edu	37	2	29981423	29981423	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALK	238	broad.mit.edu	37	2	30061487	30061487	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALK	238	broad.mit.edu	37	2	30107768	30107768	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALK	238	broad.mit.edu	37	2	30124113	30124113	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALMS1P	200420	broad.mit.edu	37	2	73902015	73902015	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALMS1	7840	broad.mit.edu	37	2	73799765	73799765	+	Silent	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALOX5	240	broad.mit.edu	37	10	45936928	45936928	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMBP	259	broad.mit.edu	37	9	116835314	116835314	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMBRA1	55626	broad.mit.edu	37	11	46450204	46450204	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMELX	265	broad.mit.edu	37	X	11318867	11318867	+	3'UTR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMMECR1L	83607	broad.mit.edu	37	2	128631784	128631784	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMMECR1	9949	broad.mit.edu	37	X	109441769	109441769	+	Silent	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMMECR1	9949	broad.mit.edu	37	X	109590043	109590043	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMOTL1	154810	broad.mit.edu	37	11	94534614	94534614	+	Intron	SNP	G	A	A	rs76917726	byFrequency;by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMOTL1	154810	broad.mit.edu	37	11	94535099	94535099	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMOT	154796	broad.mit.edu	37	X	112035189	112035189	+	Silent	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMTN	401138	broad.mit.edu	37	4	71389472	71389472	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANGEL1	23357	broad.mit.edu	37	14	77270454	77270454	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANGPT4	51378	broad.mit.edu	37	20	870668	870668	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK2	287	broad.mit.edu	37	4	113970764	113970764	+	5'Flank	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK2	287	broad.mit.edu	37	4	114238970	114238970	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK2	287	broad.mit.edu	37	4	114252939	114252939	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK2	287	broad.mit.edu	37	4	114257968	114257968	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK2	287	broad.mit.edu	37	4	114290761	114290761	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK2	287	broad.mit.edu	37	4	114290873	114290873	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK3	288	broad.mit.edu	37	10	61973136	61973136	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK3	288	broad.mit.edu	37	10	62039287	62039287	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKDD1A	348094	broad.mit.edu	37	15	65242138	65242138	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKFN1	162282	broad.mit.edu	37	17	54520214	54520214	+	Missense_Mutation	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKFN1	162282	broad.mit.edu	37	17	54559639	54559639	+	Intron	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKH	56172	broad.mit.edu	37	5	14767215	14767215	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKH	56172	broad.mit.edu	37	5	14809820	14809820	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKK1	255239	broad.mit.edu	37	11	113266734	113266734	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD13A	88455	broad.mit.edu	37	12	110475392	110475392	+	3'UTR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD16	54522	broad.mit.edu	37	10	5919902	5919902	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD17	26057	broad.mit.edu	37	4	73942560	73942560	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD20B	729171	broad.mit.edu	37	2	95514035	95514035	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD24	170961	broad.mit.edu	37	19	4222809	4222809	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD27	84079	broad.mit.edu	37	19	33108571	33108571	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD30A	91074	broad.mit.edu	37	10	37414947	37414947	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD30A	91074	broad.mit.edu	37	10	37447548	37447548	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD30A	91074	broad.mit.edu	37	10	37506619	37506619	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD30B	374860	broad.mit.edu	37	18	14808418	14808418	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD36	375248	broad.mit.edu	37	2	97879508	97879508	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD36	375248	broad.mit.edu	37	2	97882997	97882997	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD44	91526	broad.mit.edu	37	2	198051515	198051515	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD7	56311	broad.mit.edu	37	7	117880135	117880135	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKS1B	56899	broad.mit.edu	37	12	100100633	100100633	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKS1B	56899	broad.mit.edu	37	12	100234295	100234295	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKS1B	56899	broad.mit.edu	37	12	99480023	99480023	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKS1B	56899	broad.mit.edu	37	12	99498989	99498989	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO10	55129	broad.mit.edu	37	3	43428653	43428653	+	Intron	SNP	C	G	G	rs115300959	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO2	57101	broad.mit.edu	37	12	5738833	5738833	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO2	57101	broad.mit.edu	37	12	5842068	5842068	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO2	57101	broad.mit.edu	37	12	5876091	5876091	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO2	57101	broad.mit.edu	37	12	5969296	5969296	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO3	63982	broad.mit.edu	37	11	26463847	26463847	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO3	63982	broad.mit.edu	37	11	26465275	26465275	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO3	63982	broad.mit.edu	37	11	26663424	26663424	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO4	121601	broad.mit.edu	37	12	101147640	101147640	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO4	121601	broad.mit.edu	37	12	101242234	101242234	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO4	121601	broad.mit.edu	37	12	101277947	101277947	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO5	203859	broad.mit.edu	37	11	22232823	22232823	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO6	196527	broad.mit.edu	37	12	45752951	45752951	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO6	196527	broad.mit.edu	37	12	45754297	45754297	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANPEP	290	broad.mit.edu	37	15	90347685	90347685	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANTXR1	84168	broad.mit.edu	37	2	69252275	69252275	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANTXR1	84168	broad.mit.edu	37	2	69468959	69468959	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANXA10	11199	broad.mit.edu	37	4	169049336	169049336	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AOAH	313	broad.mit.edu	37	7	36633954	36633954	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AOC2	314	broad.mit.edu	37	17	40996510	40996510	+	5'Flank	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AOC2	314	broad.mit.edu	37	17	41001430	41001430	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AOC3	8639	broad.mit.edu	37	17	41006663	41006663	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AOX1	316	broad.mit.edu	37	2	201502993	201502994	+	Missense_Mutation	DNP	GG	AT	AT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP1B1	162	broad.mit.edu	37	22	29726335	29726335	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP2A1	160	broad.mit.edu	37	19	50309861	50309861	+	Intron	DEL	C	-	-	rs35344605		TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP3B1	8546	broad.mit.edu	37	5	77321667	77321667	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP3B2	8120	broad.mit.edu	37	15	83360619	83360619	+	Intron	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP3M2	10947	broad.mit.edu	37	8	42020081	42020081	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP3S2	10239	broad.mit.edu	37	15	90454018	90454018	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APAF1	317	broad.mit.edu	37	12	99065530	99065530	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APAF1	317	broad.mit.edu	37	12	99106159	99106159	+	Silent	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APBB1IP	54518	broad.mit.edu	37	10	26759798	26759798	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APC2	10297	broad.mit.edu	37	19	1462091	1462091	+	Nonsense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APIP	51074	broad.mit.edu	37	11	34922278	34922278	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOB48R	55911	broad.mit.edu	37	16	28508760	28508760	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOB	338	broad.mit.edu	37	2	21241910	21241910	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APPL1	26060	broad.mit.edu	37	3	57303660	57303660	+	Missense_Mutation	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APPL2	55198	broad.mit.edu	37	12	105583676	105583676	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AQR	9716	broad.mit.edu	37	15	35152405	35152405	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AQR	9716	broad.mit.edu	37	15	35165962	35165962	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AQR	9716	broad.mit.edu	37	15	35166691	35166691	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARAP2	116984	broad.mit.edu	37	4	36135189	36135189	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARFGAP1	55738	broad.mit.edu	37	20	61910280	61910280	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARFGEF1	10565	broad.mit.edu	37	8	68188307	68188307	+	Missense_Mutation	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARGLU1	55082	broad.mit.edu	37	13	107209470	107209470	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP10	79658	broad.mit.edu	37	4	148802929	148802929	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP10	79658	broad.mit.edu	37	4	148958480	148958480	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP15	55843	broad.mit.edu	37	2	143974009	143974009	+	Silent	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP15	55843	broad.mit.edu	37	2	144473726	144473726	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP27	201176	broad.mit.edu	37	17	43473953	43473953	+	Splice_Site	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP31	57514	broad.mit.edu	37	3	119051105	119051105	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP32	9743	broad.mit.edu	37	11	128948207	128948207	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP36	158763	broad.mit.edu	37	X	130215686	130215686	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP39	80728	broad.mit.edu	37	8	145830368	145830368	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP6	395	broad.mit.edu	37	X	11308505	11308505	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP6	395	broad.mit.edu	37	X	11315125	11315125	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP6	395	broad.mit.edu	37	X	11682953	11682953	+	5'UTR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP9	64333	broad.mit.edu	37	12	57872366	57872366	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF12	23365	broad.mit.edu	37	11	120328720	120328720	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF1	9138	broad.mit.edu	37	19	42392153	42392153	+	5'UTR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF5	7984	broad.mit.edu	37	7	144076006	144076006	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF6	9459	broad.mit.edu	37	X	135863101	135863101	+	5'UTR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARID3C	138715	broad.mit.edu	37	9	34622007	34622007	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARL13A	392509	broad.mit.edu	37	X	100243502	100243502	+	3'UTR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARL15	54622	broad.mit.edu	37	5	53503219	53503219	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARMC3	219681	broad.mit.edu	37	10	23270286	23270286	+	Missense_Mutation	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARMC3	219681	broad.mit.edu	37	10	23320720	23320720	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARNTL	406	broad.mit.edu	37	11	13329083	13329083	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARNTL	406	broad.mit.edu	37	11	13341592	13341592	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARPC1A	10552	broad.mit.edu	37	7	98951633	98951633	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARPC1A	10552	broad.mit.edu	37	7	98951635	98951635	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARPP21	10777	broad.mit.edu	37	3	35730472	35730472	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARPP21	10777	broad.mit.edu	37	3	35750563	35750563	+	Splice_Site	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARR3	407	broad.mit.edu	37	X	69497148	69497148	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARSG	22901	broad.mit.edu	37	17	66382180	66382181	+	Intron	DNP	CA	AT	AT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARV1	64801	broad.mit.edu	37	1	231114909	231114909	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AR	367	broad.mit.edu	37	X	66765999	66765999	+	Silent	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AR	367	broad.mit.edu	37	X	66786719	66786719	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AR	367	broad.mit.edu	37	X	66843779	66843780	+	Intron	DNP	CA	TC	TC			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASAP1	50807	broad.mit.edu	37	8	131130908	131130908	+	Nonsense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASAP2	8853	broad.mit.edu	37	2	9472729	9472729	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASB11	140456	broad.mit.edu	37	X	15311242	15311243	+	Intron	DNP	AT	CA	CA			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASB2	51676	broad.mit.edu	37	14	94417093	94417094	+	Intron	DNP	GG	TT	TT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASB4	51666	broad.mit.edu	37	7	95143493	95143493	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASH1L	55870	broad.mit.edu	37	1	155451539	155451539	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN1	460	broad.mit.edu	37	1	176848358	176848358	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN1	460	broad.mit.edu	37	1	176853629	176853629	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN1	460	broad.mit.edu	37	1	176864008	176864008	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN1	460	broad.mit.edu	37	1	176901537	176901537	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN1	460	broad.mit.edu	37	1	176939226	176939226	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN1	460	broad.mit.edu	37	1	176939641	176939641	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN1	460	broad.mit.edu	37	1	176952551	176952551	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN1	460	broad.mit.edu	37	1	177001964	177001964	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN1	460	broad.mit.edu	37	1	177037246	177037246	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN2	23245	broad.mit.edu	37	9	119488438	119488438	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN2	23245	broad.mit.edu	37	9	119649991	119649991	+	Intron	SNP	G	T	T	rs140146418		TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN2	23245	broad.mit.edu	37	9	119865780	119865780	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN2	23245	broad.mit.edu	37	9	120062940	120062940	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN2	23245	broad.mit.edu	37	9	120170371	120170371	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN2	23245	broad.mit.edu	37	9	120176546	120176546	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATAD1	84896	broad.mit.edu	37	10	89527380	89527380	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATF2	1386	broad.mit.edu	37	2	176001188	176001188	+	5'UTR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATF6B	1388	broad.mit.edu	37	6	32084491	32084491	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATF6	22926	broad.mit.edu	37	1	161790826	161790826	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATF7IP	55729	broad.mit.edu	37	12	14629025	14629025	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATG3	64422	broad.mit.edu	37	3	112269127	112269127	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATG4A	115201	broad.mit.edu	37	X	107361949	107361949	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATG4D	84971	broad.mit.edu	37	19	10659647	10659647	+	Silent	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATG4D	84971	broad.mit.edu	37	19	10663550	10663550	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATG4D	84971	broad.mit.edu	37	19	10663553	10663553	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP10A	57194	broad.mit.edu	37	15	25958899	25958899	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP10A	57194	broad.mit.edu	37	15	25971134	25971134	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP10B	23120	broad.mit.edu	37	5	160042781	160042781	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP10D	57205	broad.mit.edu	37	4	47589199	47589199	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP11C	286410	broad.mit.edu	37	X	138882416	138882416	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP11C	286410	broad.mit.edu	37	X	138886868	138886868	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1A2	477	broad.mit.edu	37	1	160100119	160100119	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1A3	478	broad.mit.edu	37	19	42473061	42473061	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1A3	478	broad.mit.edu	37	19	42479787	42479787	+	Nonsense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1A3	478	broad.mit.edu	37	19	42489244	42489244	+	Silent	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1A4	480	broad.mit.edu	37	1	160147210	160147210	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1B4	23439	broad.mit.edu	37	X	119500389	119500389	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1B4	23439	broad.mit.edu	37	X	119510187	119510187	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2B3	492	broad.mit.edu	37	X	152825354	152825354	+	Silent	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP4A	495	broad.mit.edu	37	19	36046325	36046325	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP4B	496	broad.mit.edu	37	13	114309325	114309325	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP5B	506	broad.mit.edu	37	12	57037874	57037874	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP5F1	515	broad.mit.edu	37	1	111992462	111992462	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP5G3	518	broad.mit.edu	37	2	176043979	176043979	+	Splice_Site	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP5J	522	broad.mit.edu	37	21	27099902	27099902	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6AP1	537	broad.mit.edu	37	X	153664221	153664221	+	Missense_Mutation	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6V0A1	535	broad.mit.edu	37	17	40653195	40653195	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP7A	538	broad.mit.edu	37	X	77227269	77227269	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP7A	538	broad.mit.edu	37	X	77296122	77296122	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP8A2	51761	broad.mit.edu	37	13	26112153	26112153	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP8A2	51761	broad.mit.edu	37	13	26112218	26112218	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP8A2	51761	broad.mit.edu	37	13	26153861	26153861	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATPBD4	89978	broad.mit.edu	37	15	35742976	35742976	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATRX	546	broad.mit.edu	37	X	76872012	76872012	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATRX	546	broad.mit.edu	37	X	76889171	76889171	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATR	545	broad.mit.edu	37	3	142168294	142168294	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATR	545	broad.mit.edu	37	3	142170243	142170243	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATXN1	6310	broad.mit.edu	37	6	16399773	16399773	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATXN7L1	222255	broad.mit.edu	37	7	105505390	105505390	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AUTS2	26053	broad.mit.edu	37	7	70107042	70107042	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AVEN	57099	broad.mit.edu	37	15	34158965	34158965	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AVL9	23080	broad.mit.edu	37	7	32957164	32957164	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AWAT1	158833	broad.mit.edu	37	X	69454541	69454541	+	5'UTR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AWAT1	158833	broad.mit.edu	37	X	69455838	69455838	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AWAT1	158833	broad.mit.edu	37	X	69460072	69460072	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AXIN1	8312	broad.mit.edu	37	16	364636	364636	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AXIN2	8313	broad.mit.edu	37	17	63622195	63622195	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
B3GALT1	8708	broad.mit.edu	37	2	168713748	168713748	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
B3GAT2	135152	broad.mit.edu	37	6	71628067	71628067	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
B4GALNT2	124872	broad.mit.edu	37	17	47236786	47236786	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAALC	79870	broad.mit.edu	37	8	104197019	104197019	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BACH2	60468	broad.mit.edu	37	6	90781809	90781809	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BACH2	60468	broad.mit.edu	37	6	90809026	90809026	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BACH2	60468	broad.mit.edu	37	6	90845570	90845570	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAI1	575	broad.mit.edu	37	8	143558745	143558745	+	Splice_Site	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAI3	577	broad.mit.edu	37	6	69646435	69646435	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAI3	577	broad.mit.edu	37	6	69728345	69728345	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAI3	577	broad.mit.edu	37	6	69908776	69908776	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAI3	577	broad.mit.edu	37	6	70087811	70087811	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAIAP2L1	55971	broad.mit.edu	37	7	97941391	97941391	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAT2L1	84726	broad.mit.edu	37	9	134319564	134319564	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAT2L2	23215	broad.mit.edu	37	1	171494203	171494203	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAZ1B	9031	broad.mit.edu	37	7	72892280	72892280	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAZ2B	29994	broad.mit.edu	37	2	160287560	160287560	+	Missense_Mutation	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BBS10	79738	broad.mit.edu	37	12	76740736	76740736	+	Silent	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BBS9	27241	broad.mit.edu	37	7	33404385	33404385	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BBX	56987	broad.mit.edu	37	3	107491621	107491621	+	Silent	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCAN	63827	broad.mit.edu	37	1	156616000	156616000	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCAN	63827	broad.mit.edu	37	1	156627399	156627399	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCAS3	54828	broad.mit.edu	37	17	58804520	58804520	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCAS3	54828	broad.mit.edu	37	17	58887692	58887692	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCAS3	54828	broad.mit.edu	37	17	59063628	59063628	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCL11A	53335	broad.mit.edu	37	2	60731922	60731922	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCL11A	53335	broad.mit.edu	37	2	60737233	60737233	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCORL1	63035	broad.mit.edu	37	X	129146846	129146846	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCORL1	63035	broad.mit.edu	37	X	129149333	129149333	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCORL1	63035	broad.mit.edu	37	X	129162885	129162885	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BDKRB2	624	broad.mit.edu	37	14	96703407	96703407	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BEND2	139105	broad.mit.edu	37	X	18192296	18192296	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BEND2	139105	broad.mit.edu	37	X	18221603	18221603	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BEX5	340542	broad.mit.edu	37	X	101408747	101408747	+	3'UTR	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BGN	633	broad.mit.edu	37	X	152770098	152770098	+	Silent	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BGN	633	broad.mit.edu	37	X	152770100	152770100	+	Missense_Mutation	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BGN	633	broad.mit.edu	37	X	152770102	152770102	+	Missense_Mutation	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BHLHB9	80823	broad.mit.edu	37	X	102004415	102004415	+	Silent	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BHMT2	23743	broad.mit.edu	37	5	78376479	78376479	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BICC1	80114	broad.mit.edu	37	10	60574818	60574818	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BIN2	51411	broad.mit.edu	37	12	51707519	51707519	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BIRC6	57448	broad.mit.edu	37	2	32692568	32692568	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMP15	9210	broad.mit.edu	37	X	50659413	50659413	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMP7	655	broad.mit.edu	37	20	55758869	55758869	+	Silent	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMPR1B	658	broad.mit.edu	37	4	96052782	96052782	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMPR2	659	broad.mit.edu	37	2	203417614	203417614	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMX	660	broad.mit.edu	37	X	15564795	15564795	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BNC2	54796	broad.mit.edu	37	9	16738330	16738330	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BNC2	54796	broad.mit.edu	37	9	16769548	16769548	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BOC	91653	broad.mit.edu	37	3	112987219	112987219	+	Nonsense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BOC	91653	broad.mit.edu	37	3	112998277	112998277	+	Silent	SNP	C	G	G	rs149565679		TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BPI	671	broad.mit.edu	37	20	36965663	36965663	+	3'UTR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRAF	673	broad.mit.edu	37	7	140508807	140508807	+	Intron	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRCA2	675	broad.mit.edu	37	13	32914805	32914805	+	Missense_Mutation	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRCA2	675	broad.mit.edu	37	13	32914807	32914807	+	Silent	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRE	9577	broad.mit.edu	37	2	28422529	28422529	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRIP1	83990	broad.mit.edu	37	17	59820264	59820264	+	Intron	DEL	A	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRMS1	25855	broad.mit.edu	37	11	66105607	66105607	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRPF3	27154	broad.mit.edu	37	6	36175015	36175015	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRWD3	254065	broad.mit.edu	37	X	80001181	80001181	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BSDC1	55108	broad.mit.edu	37	1	32842055	32842055	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BSPRY	54836	broad.mit.edu	37	9	116131770	116131770	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTBD11	121551	broad.mit.edu	37	12	107713142	107713142	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTBD11	121551	broad.mit.edu	37	12	107755835	107755835	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTBD11	121551	broad.mit.edu	37	12	107761877	107761877	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTBD11	121551	broad.mit.edu	37	12	107782345	107782345	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTBD11	121551	broad.mit.edu	37	12	107790617	107790617	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTBD11	121551	broad.mit.edu	37	12	107833346	107833346	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTBD11	121551	broad.mit.edu	37	12	107938156	107938156	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTBD11	121551	broad.mit.edu	37	12	108045504	108045504	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTBD11	121551	broad.mit.edu	37	12	108051373	108051373	+	Nonsense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTBD12	84464	broad.mit.edu	37	16	3658545	3658545	+	Missense_Mutation	SNP	C	A	A	rs137976282	byFrequency	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTBD7	55727	broad.mit.edu	37	14	93723643	93723643	+	Silent	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTG1	694	broad.mit.edu	37	12	92509964	92509964	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTN2A1	11120	broad.mit.edu	37	6	26468738	26468738	+	Silent	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTN2A2	10385	broad.mit.edu	37	6	26390243	26390243	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTN2A3	54718	broad.mit.edu	37	6	26423501	26423501	+	Silent	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BUB1B	701	broad.mit.edu	37	15	40462866	40462866	+	Missense_Mutation	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf11	83938	broad.mit.edu	37	10	77542852	77542852	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf11	83938	broad.mit.edu	37	10	77570224	77570224	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf11	83938	broad.mit.edu	37	10	77845872	77845872	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf137	26098	broad.mit.edu	37	10	127408432	127408432	+	Missense_Mutation	SNP	G	C	C	rs61742141	byFrequency	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf53	282966	broad.mit.edu	37	10	50902609	50902609	+	Silent	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf68	79741	broad.mit.edu	37	10	33134974	33134974	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf71	118461	broad.mit.edu	37	10	50531881	50531881	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf72	196740	broad.mit.edu	37	10	50255349	50255349	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf76	79591	broad.mit.edu	37	10	103649264	103649264	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf90	118611	broad.mit.edu	37	10	128306652	128306652	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf96	374355	broad.mit.edu	37	10	118101594	118101594	+	Missense_Mutation	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf30	56946	broad.mit.edu	37	11	76197470	76197470	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf40	143501	broad.mit.edu	37	11	4593625	4593625	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf41	25758	broad.mit.edu	37	11	33667227	33667227	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf41	25758	broad.mit.edu	37	11	33682438	33682438	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf42	160298	broad.mit.edu	37	11	6231906	6231906	+	Intron	SNP	T	A	A	rs144321453	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf59	55004	broad.mit.edu	37	11	71809096	71809096	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf66	220004	broad.mit.edu	37	11	61250202	61250202	+	Missense_Mutation	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf74	119710	broad.mit.edu	37	11	36680755	36680755	+	3'UTR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf11	55726	broad.mit.edu	37	12	27078781	27078781	+	Silent	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf40	283461	broad.mit.edu	37	12	40020138	40020138	+	5'UTR	DEL	G	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf42	374470	broad.mit.edu	37	12	103685933	103685933	+	Intron	DEL	G	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf42	374470	broad.mit.edu	37	12	103759987	103759987	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf4	57102	broad.mit.edu	37	12	4629749	4629749	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf51	283450	broad.mit.edu	37	12	112641564	112641564	+	Missense_Mutation	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf53	196500	broad.mit.edu	37	12	6811821	6811821	+	5'Flank	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf63	374467	broad.mit.edu	37	12	97080384	97080384	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C13orf26	122046	broad.mit.edu	37	13	31526832	31526832	+	Nonsense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf101	54916	broad.mit.edu	37	14	57075667	57075667	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf145	145508	broad.mit.edu	37	14	80981524	80981524	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf159	80017	broad.mit.edu	37	14	91587193	91587193	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf179	112752	broad.mit.edu	37	14	76525232	76525232	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf68	283600	broad.mit.edu	37	14	100792133	100792133	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf68	283600	broad.mit.edu	37	14	100793356	100793356	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf73	91828	broad.mit.edu	37	14	103571471	103571471	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf41	84529	broad.mit.edu	37	15	36910855	36910855	+	Intron	DEL	C	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf41	84529	broad.mit.edu	37	15	37085424	37085424	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf55	256646	broad.mit.edu	37	15	34648871	34648871	+	Frame_Shift_Del	DEL	C	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C16orf68	79091	broad.mit.edu	37	16	8722919	8722919	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C16orf88	400506	broad.mit.edu	37	16	19725533	19725533	+	Silent	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C16orf92	146378	broad.mit.edu	37	16	30035398	30035398	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf54	283982	broad.mit.edu	37	17	71815453	71815453	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf66	256957	broad.mit.edu	37	17	34191867	34191867	+	Silent	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C18orf1	753	broad.mit.edu	37	18	13594426	13594426	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C18orf1	753	broad.mit.edu	37	18	13645418	13645418	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C18orf2	56651	broad.mit.edu	37	18	1258715	1258715	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C18orf34	374864	broad.mit.edu	37	18	31001810	31001810	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1QTNF7	114905	broad.mit.edu	37	4	15361731	15361731	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1QTNF7	114905	broad.mit.edu	37	4	15394125	15394125	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf107	27042	broad.mit.edu	37	1	210014250	210014250	+	Silent	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf112	55732	broad.mit.edu	37	1	169654350	169654350	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf112	55732	broad.mit.edu	37	1	169785346	169785346	+	Intron	DEL	T	-	-	rs35682787		TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf112	55732	broad.mit.edu	37	1	169801665	169801665	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf114	57821	broad.mit.edu	37	1	169385576	169385576	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf124	83932	broad.mit.edu	37	1	231474051	231474051	+	5'UTR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf125	126859	broad.mit.edu	37	1	179408902	179408902	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf125	126859	broad.mit.edu	37	1	179452372	179452372	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf135	79000	broad.mit.edu	37	1	26162282	26162282	+	Silent	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf168	199920	broad.mit.edu	37	1	57221675	57221675	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf168	199920	broad.mit.edu	37	1	57224483	57224483	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf173	127254	broad.mit.edu	37	1	75102279	75102279	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf173	127254	broad.mit.edu	37	1	75114991	75114991	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf194	127003	broad.mit.edu	37	1	109650806	109650806	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf21	81563	broad.mit.edu	37	1	184466789	184466789	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf83	127428	broad.mit.edu	37	1	54561087	54561087	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf87	127795	broad.mit.edu	37	1	60496016	60496016	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf95	375057	broad.mit.edu	37	1	226784576	226784576	+	Silent	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf103	24141	broad.mit.edu	37	20	9496154	9496154	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf152	140894	broad.mit.edu	37	20	34560506	34560506	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf194	25943	broad.mit.edu	37	20	3285094	3285094	+	Missense_Mutation	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf26	26074	broad.mit.edu	37	20	20066232	20066232	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf26	26074	broad.mit.edu	37	20	20158271	20158271	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf70	140683	broad.mit.edu	37	20	31763135	31763135	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf71	128861	broad.mit.edu	37	20	31814281	31814281	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf94	128710	broad.mit.edu	37	20	10603340	10603340	+	Silent	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C21orf29	54084	broad.mit.edu	37	21	46003087	46003087	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C21orf34	388815	broad.mit.edu	37	21	17775308	17775308	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C21orf59	56683	broad.mit.edu	37	21	33965216	33965216	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C21orf94	246705	broad.mit.edu	37	21	29395055	29395055	+	RNA	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C22orf43	51233	broad.mit.edu	37	22	23968190	23968190	+	Missense_Mutation	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf34	79823	broad.mit.edu	37	2	44599730	44599730	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf34	79823	broad.mit.edu	37	2	44893078	44893078	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf34	79823	broad.mit.edu	37	2	44981122	44981122	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf60	129450	broad.mit.edu	37	2	200802336	200802336	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf65	130951	broad.mit.edu	37	2	74803408	74803408	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf76	130355	broad.mit.edu	37	2	120097797	120097797	+	5'UTR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf85	285093	broad.mit.edu	37	2	242814614	242814614	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf86	51057	broad.mit.edu	37	2	63665148	63665148	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf88	84281	broad.mit.edu	37	2	191013735	191013735	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3	718	broad.mit.edu	37	19	6697380	6697380	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf15	89876	broad.mit.edu	37	3	119446827	119446827	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf23	285343	broad.mit.edu	37	3	44441874	44441874	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf26	84319	broad.mit.edu	37	3	99868988	99868988	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf26	84319	broad.mit.edu	37	3	99895168	99895168	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf26	84319	broad.mit.edu	37	3	99896738	99896738	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf32	51066	broad.mit.edu	37	3	8766179	8766179	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf57	165679	broad.mit.edu	37	3	161065912	161065912	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf70	285382	broad.mit.edu	37	3	184866097	184866097	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf79	152118	broad.mit.edu	37	3	153203855	153203855	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4BPA	722	broad.mit.edu	37	1	207300356	207300356	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf22	255119	broad.mit.edu	37	4	81849087	81849087	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf35	85438	broad.mit.edu	37	4	71201001	71201001	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf37	285555	broad.mit.edu	37	4	98515460	98515460	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf37	285555	broad.mit.edu	37	4	98883399	98883400	+	Intron	DNP	GG	TT	TT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf45	152940	broad.mit.edu	37	4	159969377	159969377	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf13	9315	broad.mit.edu	37	5	111100262	111100262	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf36	285600	broad.mit.edu	37	5	93708083	93708083	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf39	389289	broad.mit.edu	37	5	43042823	43042823	+	5'Flank	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf42	65250	broad.mit.edu	37	5	37169220	37169220	+	Silent	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf46	389336	broad.mit.edu	37	5	147281487	147281487	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf55	116349	broad.mit.edu	37	5	442814	442819	+	In_Frame_Del	DEL	CCTTCT	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6	729	broad.mit.edu	37	5	41181977	41181977	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6	729	broad.mit.edu	37	5	41225882	41225882	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf10	10665	broad.mit.edu	37	6	32291473	32291473	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf118	168090	broad.mit.edu	37	6	165715741	165715741	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf118	168090	broad.mit.edu	37	6	165722061	165722061	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf138	442213	broad.mit.edu	37	6	47976798	47976798	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf138	442213	broad.mit.edu	37	6	47989924	47989924	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf142	90523	broad.mit.edu	37	6	53995667	53995667	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf142	90523	broad.mit.edu	37	6	54115064	54115064	+	Intron	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf167	253714	broad.mit.edu	37	6	97676907	97676907	+	Silent	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf192	116843	broad.mit.edu	37	6	133118323	133118323	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf201	404220	broad.mit.edu	37	6	4087979	4087979	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf204	387119	broad.mit.edu	37	6	118986367	118986367	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf25	80739	broad.mit.edu	37	6	31692586	31692586	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf10	79783	broad.mit.edu	37	7	40788947	40788947	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf16	10842	broad.mit.edu	37	7	31747019	31747019	+	3'UTR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf40	285958	broad.mit.edu	37	7	45024950	45024950	+	RNA	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf58	79974	broad.mit.edu	37	7	120678264	120678264	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf58	79974	broad.mit.edu	37	7	120692599	120692599	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf58	79974	broad.mit.edu	37	7	120921533	120921533	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf60	154743	broad.mit.edu	37	7	112521397	112521397	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8orf74	203076	broad.mit.edu	37	8	10555214	10555214	+	Missense_Mutation	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9	735	broad.mit.edu	37	5	39313733	39313733	+	Intron	DEL	T	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf102	375748	broad.mit.edu	37	9	98734494	98734494	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf135	138255	broad.mit.edu	37	9	72518665	72518665	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf171	389799	broad.mit.edu	37	9	135374725	135374725	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf25	203259	broad.mit.edu	37	9	34415003	34415003	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf46	55848	broad.mit.edu	37	9	5494396	5494396	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf5	23731	broad.mit.edu	37	9	111820048	111820048	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf5	23731	broad.mit.edu	37	9	111856649	111856649	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf71	169693	broad.mit.edu	37	9	71152154	71152154	+	3'UTR	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf84	158401	broad.mit.edu	37	9	114518680	114518680	+	Nonsense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf93	203238	broad.mit.edu	37	9	15906573	15906573	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CA10	56934	broad.mit.edu	37	17	49916015	49916015	+	Intron	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CA10	56934	broad.mit.edu	37	17	50008362	50008362	+	Silent	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CA10	56934	broad.mit.edu	37	17	50051527	50051527	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CA10	56934	broad.mit.edu	37	17	50088816	50088816	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CA10	56934	broad.mit.edu	37	17	50136920	50136920	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CA13	377677	broad.mit.edu	37	8	86207276	86207276	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CA14	23632	broad.mit.edu	37	1	150234529	150234529	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CA14	23632	broad.mit.edu	37	1	150235522	150235522	+	Nonsense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACHD1	57685	broad.mit.edu	37	1	65016370	65016371	+	Intron	INS	-	TC	TC			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1C	775	broad.mit.edu	37	12	2224636	2224636	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1C	775	broad.mit.edu	37	12	2270283	2270283	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1C	775	broad.mit.edu	37	12	2559114	2559114	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1C	775	broad.mit.edu	37	12	2601299	2601299	+	Intron	SNP	C	A	A	rs148144048	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1C	775	broad.mit.edu	37	12	2659008	2659009	+	Intron	DNP	CG	AT	AT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1C	775	broad.mit.edu	37	12	2664748	2664748	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1C	775	broad.mit.edu	37	12	2706313	2706313	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1C	775	broad.mit.edu	37	12	2715585	2715585	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1C	775	broad.mit.edu	37	12	2721163	2721163	+	Missense_Mutation	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1C	775	broad.mit.edu	37	12	2743573	2743573	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1C	775	broad.mit.edu	37	12	2778401	2778401	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1D	776	broad.mit.edu	37	3	53633376	53633376	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1D	776	broad.mit.edu	37	3	53695221	53695221	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1E	777	broad.mit.edu	37	1	181471248	181471248	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1E	777	broad.mit.edu	37	1	181479056	181479056	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1E	777	broad.mit.edu	37	1	181721516	181721516	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1E	777	broad.mit.edu	37	1	181727257	181727257	+	Intron	SNP	G	T	T	rs57434679	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1S	779	broad.mit.edu	37	1	201030581	201030581	+	Silent	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1S	779	broad.mit.edu	37	1	201038392	201038392	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA2D1	781	broad.mit.edu	37	7	81985731	81985731	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA2D3	55799	broad.mit.edu	37	3	54484587	54484587	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA2D3	55799	broad.mit.edu	37	3	54629127	54629127	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA2D3	55799	broad.mit.edu	37	3	54804022	54804022	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNB2	783	broad.mit.edu	37	10	18822916	18822916	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNG2	10369	broad.mit.edu	37	22	37050290	37050290	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNG3	10368	broad.mit.edu	37	16	24366054	24366054	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNG3	10368	broad.mit.edu	37	16	24372584	24372584	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNG3	10368	broad.mit.edu	37	16	24373040	24373040	+	Silent	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CADM2	253559	broad.mit.edu	37	3	85303423	85303423	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CADM2	253559	broad.mit.edu	37	3	85309059	85309059	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CADM2	253559	broad.mit.edu	37	3	85709800	85709800	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CADM2	253559	broad.mit.edu	37	3	85801607	85801607	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CADM2	253559	broad.mit.edu	37	3	85961574	85961574	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CADM2	253559	broad.mit.edu	37	3	86063491	86063491	+	Intron	SNP	G	T	T	rs12629171	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CADM3	57863	broad.mit.edu	37	1	159151206	159151206	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CADPS	8618	broad.mit.edu	37	3	62860687	62860688	+	Missense_Mutation	DNP	GG	AT	AT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAGE1	285782	broad.mit.edu	37	6	7341725	7341725	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAGE1	285782	broad.mit.edu	37	6	7374455	7374455	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALCOCO1	57658	broad.mit.edu	37	12	54113367	54113367	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALCOCO2	10241	broad.mit.edu	37	17	46925906	46925906	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALN1	83698	broad.mit.edu	37	7	71499031	71499031	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMK1G	57172	broad.mit.edu	37	1	209775663	209775663	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMK2D	817	broad.mit.edu	37	4	114378602	114378602	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMK4	814	broad.mit.edu	37	5	110593654	110593654	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMTA1	23261	broad.mit.edu	37	1	6911428	6911428	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMTA1	23261	broad.mit.edu	37	1	7796531	7796531	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CANX	821	broad.mit.edu	37	5	179155689	179155689	+	3'UTR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPN13	92291	broad.mit.edu	37	2	30993164	30993164	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPN5	726	broad.mit.edu	37	11	76830158	76830158	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPN6	827	broad.mit.edu	37	X	110489962	110489962	+	Missense_Mutation	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPN6	827	broad.mit.edu	37	X	110490827	110490827	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPN6	827	broad.mit.edu	37	X	110497650	110497650	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPN6	827	broad.mit.edu	37	X	110512607	110512607	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPN8	388743	broad.mit.edu	37	1	223803646	223803646	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPS2	84698	broad.mit.edu	37	12	75699433	75699433	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CARD14	79092	broad.mit.edu	37	17	78163505	78163505	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASK	8573	broad.mit.edu	37	X	41448845	41448845	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASP1	834	broad.mit.edu	37	11	104896879	104896879	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASP2	835	broad.mit.edu	37	7	142989007	142989007	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASP4	837	broad.mit.edu	37	11	104816278	104816278	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASP5	838	broad.mit.edu	37	11	104871293	104871293	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASP9	842	broad.mit.edu	37	1	15820426	15820426	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASP9	842	broad.mit.edu	37	1	15834293	15834293	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASS4	57091	broad.mit.edu	37	20	54987701	54987701	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CBFB	865	broad.mit.edu	37	16	67070584	67070584	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CBLN4	140689	broad.mit.edu	37	20	54579067	54579067	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC108	255101	broad.mit.edu	37	2	219886503	219886503	+	Silent	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC129	223075	broad.mit.edu	37	7	31695660	31695661	+	3'UTR	DNP	GG	TT	TT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC136	64753	broad.mit.edu	37	7	128446466	128446466	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC136	64753	broad.mit.edu	37	7	128446872	128446872	+	Missense_Mutation	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC136	64753	broad.mit.edu	37	7	128455589	128455589	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC149	91050	broad.mit.edu	37	4	24838087	24838087	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC149	91050	broad.mit.edu	37	4	24878391	24878391	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC28B	79140	broad.mit.edu	37	1	32670241	32670241	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC38	120935	broad.mit.edu	37	12	96273931	96273931	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC38	120935	broad.mit.edu	37	12	96300046	96300046	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC39	339829	broad.mit.edu	37	3	180397269	180397269	+	5'UTR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC52	152185	broad.mit.edu	37	3	113229207	113229207	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC63	160762	broad.mit.edu	37	12	111336647	111336647	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC77	84318	broad.mit.edu	37	12	529686	529686	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC80	151887	broad.mit.edu	37	3	112346874	112346874	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC91	55297	broad.mit.edu	37	12	28678680	28678680	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC93	54520	broad.mit.edu	37	2	118705499	118705499	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCHCR1	54535	broad.mit.edu	37	6	31112687	31112687	+	Silent	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCKBR	887	broad.mit.edu	37	11	6286794	6286794	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCKBR	887	broad.mit.edu	37	11	6291483	6291483	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCL1	6346	broad.mit.edu	37	17	32688818	32688818	+	Silent	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCL3	6348	broad.mit.edu	37	17	34417244	34417244	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCNB3	85417	broad.mit.edu	37	X	50052405	50052405	+	Silent	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCNB3	85417	broad.mit.edu	37	X	50088818	50088818	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCNB3	85417	broad.mit.edu	37	X	50090716	50090716	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCND2	894	broad.mit.edu	37	12	4398020	4398020	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCND2	894	broad.mit.edu	37	12	4408958	4408958	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCNJL	79616	broad.mit.edu	37	5	159758093	159758093	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCNY	219771	broad.mit.edu	37	10	35682041	35682041	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCR8	1237	broad.mit.edu	37	3	39374753	39374753	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCT6A	908	broad.mit.edu	37	7	56126352	56126352	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD163L1	283316	broad.mit.edu	37	12	7525912	7525912	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD163L1	283316	broad.mit.edu	37	12	7527243	7527243	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD180	4064	broad.mit.edu	37	5	66486117	66486117	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD180	4064	broad.mit.edu	37	5	66492261	66492261	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD19	930	broad.mit.edu	37	16	28943441	28943441	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD1A	909	broad.mit.edu	37	1	158224725	158224725	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD1E	913	broad.mit.edu	37	1	158325385	158325385	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD1E	913	broad.mit.edu	37	1	158325939	158325939	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD200	4345	broad.mit.edu	37	3	112058298	112058298	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD244	51744	broad.mit.edu	37	1	160808165	160808165	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD300C	10871	broad.mit.edu	37	17	72540716	72540716	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD34	947	broad.mit.edu	37	1	208062439	208062439	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD40LG	959	broad.mit.edu	37	X	135728154	135728154	+	5'Flank	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD40LG	959	broad.mit.edu	37	X	135730550	135730550	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD40LG	959	broad.mit.edu	37	X	135741769	135741769	+	3'UTR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD48	962	broad.mit.edu	37	1	160681606	160681606	+	5'Flank	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD4	920	broad.mit.edu	37	12	6923306	6923306	+	Splice_Site	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD53	963	broad.mit.edu	37	1	111434104	111434104	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD53	963	broad.mit.edu	37	1	111434203	111434203	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD6	923	broad.mit.edu	37	11	60777058	60777058	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD84	8832	broad.mit.edu	37	1	160523972	160523972	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD84	8832	broad.mit.edu	37	1	160549114	160549114	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD86	942	broad.mit.edu	37	3	121819382	121819382	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD8A	925	broad.mit.edu	37	2	87013080	87013080	+	Nonsense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD93	22918	broad.mit.edu	37	20	23066137	23066137	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD96	10225	broad.mit.edu	37	3	111266912	111266912	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD99	4267	broad.mit.edu	37	X	2658656	2658656	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC20B	166979	broad.mit.edu	37	5	54415614	54415614	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC20B	166979	broad.mit.edu	37	5	54429501	54429502	+	Intron	DNP	AG	GT	GT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC25B	994	broad.mit.edu	37	20	3782492	3782492	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDCA7L	55536	broad.mit.edu	37	7	21942556	21942556	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDCA7L	55536	broad.mit.edu	37	7	21948119	21948119	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH10	1008	broad.mit.edu	37	5	24488296	24488297	+	Intron	DNP	CG	TT	TT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH11	1009	broad.mit.edu	37	16	65068860	65068860	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH12	1010	broad.mit.edu	37	5	21783589	21783589	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH12	1010	broad.mit.edu	37	5	21842303	21842303	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH12	1010	broad.mit.edu	37	5	21842443	21842443	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH12	1010	broad.mit.edu	37	5	22089289	22089289	+	Intron	SNP	G	T	T	rs146856457	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH12	1010	broad.mit.edu	37	5	22143128	22143128	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH12	1010	broad.mit.edu	37	5	22592921	22592921	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH13	1012	broad.mit.edu	37	16	82768467	82768467	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH13	1012	broad.mit.edu	37	16	82815222	82815222	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH13	1012	broad.mit.edu	37	16	83066999	83066999	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH13	1012	broad.mit.edu	37	16	83233682	83233683	+	Intron	DNP	GA	TT	TT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH13	1012	broad.mit.edu	37	16	83373598	83373598	+	Intron	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH13	1012	broad.mit.edu	37	16	83600481	83600481	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH13	1012	broad.mit.edu	37	16	83601821	83601821	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH13	1012	broad.mit.edu	37	16	83798363	83798363	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH20	28316	broad.mit.edu	37	18	59170418	59170418	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH22	64405	broad.mit.edu	37	20	44845305	44845305	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH22	64405	broad.mit.edu	37	20	44903953	44903953	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH23	64072	broad.mit.edu	37	10	73193319	73193319	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH26	60437	broad.mit.edu	37	20	58562746	58562746	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH2	1000	broad.mit.edu	37	18	25570041	25570041	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH4	1002	broad.mit.edu	37	20	59951813	59951813	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH4	1002	broad.mit.edu	37	20	60005737	60005737	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH4	1002	broad.mit.edu	37	20	60089658	60089658	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH6	1004	broad.mit.edu	37	5	31316246	31316246	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH7	1005	broad.mit.edu	37	18	63477089	63477090	+	Silent	DNP	CC	AA	AA			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH8	1006	broad.mit.edu	37	16	62055059	62055059	+	Silent	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH9	1007	broad.mit.edu	37	5	26890029	26890029	+	Silent	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH9	1007	broad.mit.edu	37	5	26903796	26903796	+	Missense_Mutation	SNP	C	G	G	rs141440884		TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH9	1007	broad.mit.edu	37	5	26916051	26916051	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH9	1007	broad.mit.edu	37	5	26941621	26941621	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK14	5218	broad.mit.edu	37	7	90437815	90437815	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK14	5218	broad.mit.edu	37	7	90456379	90456379	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK14	5218	broad.mit.edu	37	7	90463858	90463858	+	Intron	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK14	5218	broad.mit.edu	37	7	90640116	90640116	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK15	65061	broad.mit.edu	37	2	202671411	202671411	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK15	65061	broad.mit.edu	37	2	202737162	202737162	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK16	5127	broad.mit.edu	37	X	47084199	47084199	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK1	983	broad.mit.edu	37	10	62551691	62551691	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK5RAP2	55755	broad.mit.edu	37	9	123215791	123215791	+	Silent	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK6	1021	broad.mit.edu	37	7	92247458	92247458	+	Silent	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDKL1	8814	broad.mit.edu	37	14	50883005	50883005	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDKL1	8814	broad.mit.edu	37	14	50883052	50883052	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDKL5	6792	broad.mit.edu	37	X	18662808	18662808	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDKN2A	1029	broad.mit.edu	37	9	21968296	21968296	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDS2	8760	broad.mit.edu	37	20	5163641	5163641	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDX4	1046	broad.mit.edu	37	X	72667280	72667280	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEACAM18	729767	broad.mit.edu	37	19	51983727	51983727	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEACAM21	90273	broad.mit.edu	37	19	42090355	42090355	+	Intron	DEL	G	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEACAM8	1088	broad.mit.edu	37	19	43097418	43097418	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEBPZ	10153	broad.mit.edu	37	2	37455779	37455779	+	Missense_Mutation	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELA2B	51032	broad.mit.edu	37	1	15807569	15807569	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELF3	11189	broad.mit.edu	37	1	151684116	151684116	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELF4	56853	broad.mit.edu	37	18	35111823	35111823	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CENPE	1062	broad.mit.edu	37	4	104055616	104055616	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CENPE	1062	broad.mit.edu	37	4	104068942	104068942	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CENPF	1063	broad.mit.edu	37	1	214822055	214822055	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CENPI	2491	broad.mit.edu	37	X	100401040	100401040	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CENPP	401541	broad.mit.edu	37	9	95099682	95099682	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP110	11064	broad.mit.edu	37	9	123924434	123924434	+	Silent	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP170L	645455	broad.mit.edu	37	4	119461435	119461435	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP192	55125	broad.mit.edu	37	18	13114266	13114266	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP250	11190	broad.mit.edu	37	20	34063669	34063669	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP290	80184	broad.mit.edu	37	12	88486561	88486561	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP70	80321	broad.mit.edu	37	3	138291770	138291770	+	5'UTR	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP72	55722	broad.mit.edu	37	5	634238	634239	+	Intron	INS	-	A	A	rs147154043	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CERKL	375298	broad.mit.edu	37	2	182402976	182402976	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFHR3	10878	broad.mit.edu	37	1	196749073	196749073	+	Missense_Mutation	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFHR5	81494	broad.mit.edu	37	1	196958234	196958234	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CGRRF1	10668	broad.mit.edu	37	14	54976777	54976777	+	Nonsense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHAT	1103	broad.mit.edu	37	10	50863506	50863506	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHCHD3	54927	broad.mit.edu	37	7	132554375	132554375	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHCHD6	84303	broad.mit.edu	37	3	126464246	126464246	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHCHD6	84303	broad.mit.edu	37	3	126503588	126503588	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHCHD6	84303	broad.mit.edu	37	3	126598874	126598874	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHCHD6	84303	broad.mit.edu	37	3	126645565	126645565	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD3	1107	broad.mit.edu	37	17	7797395	7797395	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD5	26038	broad.mit.edu	37	1	6202513	6202513	+	Silent	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD6	84181	broad.mit.edu	37	20	40143380	40143380	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD7	55636	broad.mit.edu	37	8	61655554	61655554	+	Silent	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHL1	10752	broad.mit.edu	37	3	384665	384665	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHL1	10752	broad.mit.edu	37	3	384789	384789	+	Intron	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHL1	10752	broad.mit.edu	37	3	404927	404927	+	Silent	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHL1	10752	broad.mit.edu	37	3	431256	431256	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHL1	10752	broad.mit.edu	37	3	432771	432771	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHMP2B	25978	broad.mit.edu	37	3	87302706	87302706	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHM	1121	broad.mit.edu	37	X	85211370	85211370	+	Silent	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHN2	1124	broad.mit.edu	37	7	29393178	29393178	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHPT1	56994	broad.mit.edu	37	12	102114048	102114048	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRDL1	91851	broad.mit.edu	37	X	109963236	109963236	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRM1	1128	broad.mit.edu	37	11	62678649	62678649	+	5'UTR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRM2	1129	broad.mit.edu	37	7	136578041	136578041	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRM2	1129	broad.mit.edu	37	7	136597476	136597476	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRM2	1129	broad.mit.edu	37	7	136623301	136623301	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRM2	1129	broad.mit.edu	37	7	136651666	136651666	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRM2	1129	broad.mit.edu	37	7	136670669	136670669	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRM2	1129	broad.mit.edu	37	7	136700289	136700289	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRM3	1131	broad.mit.edu	37	1	239590781	239590781	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRM3	1131	broad.mit.edu	37	1	239595207	239595207	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRM3	1131	broad.mit.edu	37	1	239868700	239868700	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRM3	1131	broad.mit.edu	37	1	240071406	240071406	+	Nonsense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRNA1	1134	broad.mit.edu	37	2	175622403	175622403	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRNA1	1134	broad.mit.edu	37	2	175622926	175622926	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRNA5	1138	broad.mit.edu	37	15	78858553	78858553	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRNA7	1139	broad.mit.edu	37	15	32360464	32360464	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRNA7	1139	broad.mit.edu	37	15	32365948	32365948	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRNG	1146	broad.mit.edu	37	2	233409479	233409479	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHST8	64377	broad.mit.edu	37	19	34263888	34263888	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHST9	83539	broad.mit.edu	37	18	24608588	24608588	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLASP1	23332	broad.mit.edu	37	2	122166658	122166658	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCA2	9635	broad.mit.edu	37	1	86904742	86904742	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCA4	22802	broad.mit.edu	37	1	87021258	87021258	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCN1	1180	broad.mit.edu	37	7	143016240	143016240	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCN1	1180	broad.mit.edu	37	7	143043412	143043412	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCN4	1183	broad.mit.edu	37	X	10139558	10139558	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCN4	1183	broad.mit.edu	37	X	10166219	10166219	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCN4	1183	broad.mit.edu	37	X	10174804	10174804	+	Silent	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCN4	1183	broad.mit.edu	37	X	10176537	10176537	+	Silent	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCN5	1184	broad.mit.edu	37	X	49764796	49764796	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLDN14	23562	broad.mit.edu	37	21	37919741	37919741	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLDN7	1366	broad.mit.edu	37	17	7165758	7165758	+	5'UTR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC4D	338339	broad.mit.edu	37	12	8666295	8666295	+	5'UTR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC4E	26253	broad.mit.edu	37	12	8689842	8689842	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC4E	26253	broad.mit.edu	37	12	8692086	8692086	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC6A	93978	broad.mit.edu	37	12	8612997	8612997	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLIC2	1193	broad.mit.edu	37	X	154521491	154521491	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLIP2	7461	broad.mit.edu	37	7	73753334	73753334	+	Silent	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLIP3	25999	broad.mit.edu	37	19	36510059	36510059	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLIP3	25999	broad.mit.edu	37	19	36517248	36517248	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLIP4	79745	broad.mit.edu	37	2	29375545	29375545	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLMN	79789	broad.mit.edu	37	14	95676994	95676994	+	Intron	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLMN	79789	broad.mit.edu	37	14	95690107	95690107	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLNK	116449	broad.mit.edu	37	4	10522329	10522329	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLNK	116449	broad.mit.edu	37	4	10542277	10542277	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLNS1A	1207	broad.mit.edu	37	11	77333672	77333672	+	Silent	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLRN1OS	116933	broad.mit.edu	37	3	150619364	150619364	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLRN1OS	116933	broad.mit.edu	37	3	150718706	150718706	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLRN1OS	116933	broad.mit.edu	37	3	150751515	150751515	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLRN1	7401	broad.mit.edu	37	3	150661494	150661494	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLRN2	645104	broad.mit.edu	37	4	17524390	17524390	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLSTN2	64084	broad.mit.edu	37	3	139697828	139697828	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLSTN2	64084	broad.mit.edu	37	3	139753713	139753713	+	Intron	DEL	T	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLSTN2	64084	broad.mit.edu	37	3	139862768	139862768	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLSTN2	64084	broad.mit.edu	37	3	139924450	139924450	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLSTN2	64084	broad.mit.edu	37	3	140122211	140122211	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLSTN2	64084	broad.mit.edu	37	3	140122651	140122652	+	Frame_Shift_Ins	INS	-	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLSTN2	64084	broad.mit.edu	37	3	140165547	140165547	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLTCL1	8218	broad.mit.edu	37	22	19220941	19220941	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLVS1	157807	broad.mit.edu	37	8	62213439	62213439	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CMIP	80790	broad.mit.edu	37	16	81618623	81618623	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CMKLR1	1240	broad.mit.edu	37	12	108684889	108684889	+	3'UTR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNGA2	1260	broad.mit.edu	37	X	150912748	150912748	+	Silent	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNGA3	1261	broad.mit.edu	37	2	99012830	99012830	+	Silent	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNGB3	54714	broad.mit.edu	37	8	87670489	87670489	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNGB3	54714	broad.mit.edu	37	8	87670507	87670507	+	Intron	SNP	C	G	G	rs73271602	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNGB3	54714	broad.mit.edu	37	8	87738838	87738838	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNKSR2	22866	broad.mit.edu	37	X	21544889	21544889	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNKSR2	22866	broad.mit.edu	37	X	21568627	21568627	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNKSR2	22866	broad.mit.edu	37	X	21591263	21591263	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNOT6L	246175	broad.mit.edu	37	4	78666127	78666127	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNOT8	9337	broad.mit.edu	37	5	154251119	154251119	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN1	1272	broad.mit.edu	37	12	41383789	41383789	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN4	152330	broad.mit.edu	37	3	2944634	2944634	+	Nonsense_Mutation	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN5	53942	broad.mit.edu	37	11	100016662	100016662	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN5	53942	broad.mit.edu	37	11	100044201	100044201	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN5	53942	broad.mit.edu	37	11	100128138	100128138	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN5	53942	broad.mit.edu	37	11	100141999	100141999	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN5	53942	broad.mit.edu	37	11	100208268	100208268	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN5	53942	broad.mit.edu	37	11	100215900	100215900	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN5	53942	broad.mit.edu	37	11	98990739	98990740	+	Intron	DNP	GA	AC	AC			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN6	27255	broad.mit.edu	37	3	1367352	1367352	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN6	27255	broad.mit.edu	37	3	1443275	1443275	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP2	26047	broad.mit.edu	37	7	145949725	145949725	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP2	26047	broad.mit.edu	37	7	146471405	146471405	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP2	26047	broad.mit.edu	37	7	147376605	147376605	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP2	26047	broad.mit.edu	37	7	147434472	147434472	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP2	26047	broad.mit.edu	37	7	147501690	147501690	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP3	79937	broad.mit.edu	37	9	39154049	39154049	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP4	85445	broad.mit.edu	37	16	76482755	76482755	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP4	85445	broad.mit.edu	37	16	76550692	76550692	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP4	85445	broad.mit.edu	37	16	76592332	76592332	+	Intron	SNP	G	C	C	rs147753872	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP5	129684	broad.mit.edu	37	2	124810045	124810045	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP5	129684	broad.mit.edu	37	2	124979373	124979373	+	Silent	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP5	129684	broad.mit.edu	37	2	125021906	125021906	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP5	129684	broad.mit.edu	37	2	125105049	125105049	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP5	129684	broad.mit.edu	37	2	125141335	125141335	+	Intron	SNP	C	T	T	rs142665597	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP5	129684	broad.mit.edu	37	2	125142393	125142393	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP5	129684	broad.mit.edu	37	2	125276353	125276353	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP5	129684	broad.mit.edu	37	2	125340119	125340119	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP5	129684	broad.mit.edu	37	2	125460703	125460703	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP5	129684	broad.mit.edu	37	2	125470631	125470631	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP5	129684	broad.mit.edu	37	2	125470979	125470979	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP5	129684	broad.mit.edu	37	2	125501441	125501441	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP5	129684	broad.mit.edu	37	2	125528841	125528841	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP5	129684	broad.mit.edu	37	2	125530342	125530342	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP5	129684	broad.mit.edu	37	2	125530379	125530379	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP5	129684	broad.mit.edu	37	2	125530474	125530474	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP5	129684	broad.mit.edu	37	2	125620946	125620946	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP5	129684	broad.mit.edu	37	2	125622900	125622900	+	Missense_Mutation	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP5	129684	broad.mit.edu	37	2	125623698	125623698	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP5	129684	broad.mit.edu	37	2	125641050	125641050	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP5	129684	broad.mit.edu	37	2	125655657	125655657	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COBL	23242	broad.mit.edu	37	7	51092691	51092691	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COG2	22796	broad.mit.edu	37	1	230824389	230824389	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COG5	10466	broad.mit.edu	37	7	107090584	107090584	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COIL	8161	broad.mit.edu	37	17	55027749	55027749	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103343530	103343530	+	3'UTR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103343664	103343664	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103345291	103345291	+	Missense_Mutation	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103491708	103491708	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A2	1302	broad.mit.edu	37	6	33131475	33131475	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A2	1302	broad.mit.edu	37	6	33139547	33139547	+	Silent	SNP	C	T	T	rs61738289		TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A2	1302	broad.mit.edu	37	6	33146840	33146840	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL12A1	1303	broad.mit.edu	37	6	75800123	75800123	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL12A1	1303	broad.mit.edu	37	6	75860873	75860873	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL13A1	1305	broad.mit.edu	37	10	71604833	71604834	+	Intron	DNP	CC	AA	AA			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL13A1	1305	broad.mit.edu	37	10	71697376	71697376	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL13A1	1305	broad.mit.edu	37	10	71716612	71716612	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL15A1	1306	broad.mit.edu	37	9	101728635	101728635	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL16A1	1307	broad.mit.edu	37	1	32148878	32148878	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL17A1	1308	broad.mit.edu	37	10	105809941	105809941	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL19A1	1310	broad.mit.edu	37	6	70897242	70897242	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL1A1	1277	broad.mit.edu	37	17	48281861	48281861	+	5'Flank	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL1A1	1277	broad.mit.edu	37	17	48281885	48281885	+	5'Flank	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL1A2	1278	broad.mit.edu	37	7	94043383	94043383	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL1A2	1278	broad.mit.edu	37	7	94056964	94056964	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL21A1	81578	broad.mit.edu	37	6	55925474	55925474	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL21A1	81578	broad.mit.edu	37	6	56031799	56031799	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL22A1	169044	broad.mit.edu	37	8	139606341	139606341	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL22A1	169044	broad.mit.edu	37	8	139705968	139705968	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL23A1	91522	broad.mit.edu	37	5	177665750	177665750	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL23A1	91522	broad.mit.edu	37	5	177672890	177672890	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL25A1	84570	broad.mit.edu	37	4	109745272	109745272	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL25A1	84570	broad.mit.edu	37	4	109767294	109767294	+	Splice_Site	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL25A1	84570	broad.mit.edu	37	4	109780836	109780836	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL25A1	84570	broad.mit.edu	37	4	109938329	109938329	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL25A1	84570	broad.mit.edu	37	4	110120595	110120595	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL29A1	256076	broad.mit.edu	37	3	130187806	130187806	+	Missense_Mutation	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL29A1	256076	broad.mit.edu	37	3	130202735	130202735	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL2A1	1280	broad.mit.edu	37	12	48372193	48372193	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL3A1	1281	broad.mit.edu	37	2	189851706	189851706	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL3A1	1281	broad.mit.edu	37	2	189867118	189867118	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A1	1282	broad.mit.edu	37	13	110815873	110815873	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A1	1282	broad.mit.edu	37	13	110865053	110865053	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A2	1284	broad.mit.edu	37	13	111026153	111026153	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A2	1284	broad.mit.edu	37	13	111084685	111084685	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A3	1285	broad.mit.edu	37	2	228118863	228118863	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A5	1287	broad.mit.edu	37	X	107760789	107760789	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A5	1287	broad.mit.edu	37	X	107838784	107838784	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A5	1287	broad.mit.edu	37	X	107917678	107917678	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A5	1287	broad.mit.edu	37	X	107931004	107931005	+	Intron	DNP	GG	TT	TT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A5	1287	broad.mit.edu	37	X	107938162	107938162	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A5	1287	broad.mit.edu	37	X	107938178	107938178	+	Intron	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A5	1287	broad.mit.edu	37	X	107938697	107938697	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A6	1288	broad.mit.edu	37	X	107417517	107417517	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A6	1288	broad.mit.edu	37	X	107422067	107422067	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A6	1288	broad.mit.edu	37	X	107442344	107442344	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A6	1288	broad.mit.edu	37	X	107471004	107471004	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A6	1288	broad.mit.edu	37	X	107471986	107471986	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A6	1288	broad.mit.edu	37	X	107509001	107509001	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL6A3	1293	broad.mit.edu	37	2	238274404	238274404	+	Silent	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL6A3	1293	broad.mit.edu	37	2	238283634	238283634	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL6A6	131873	broad.mit.edu	37	3	130318619	130318619	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL7A1	1294	broad.mit.edu	37	3	48617238	48617238	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COPG2	26958	broad.mit.edu	37	7	130290615	130290615	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COQ5	84274	broad.mit.edu	37	12	120960072	120960072	+	Silent	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CORIN	10699	broad.mit.edu	37	4	47765383	47765383	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CORO1A	11151	broad.mit.edu	37	16	30199618	30199618	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CORO2B	10391	broad.mit.edu	37	15	69018153	69018153	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CORO7	79585	broad.mit.edu	37	16	4462500	4462500	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COX7B2	170712	broad.mit.edu	37	4	46871593	46871593	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COX7B	1349	broad.mit.edu	37	X	77155020	77155020	+	5'UTR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPA1	1357	broad.mit.edu	37	7	130022144	130022144	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPB2	1361	broad.mit.edu	37	13	46658375	46658375	+	Missense_Mutation	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPEB3	22849	broad.mit.edu	37	10	93904939	93904939	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPE	1363	broad.mit.edu	37	4	166403611	166403611	+	Intron	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPLX2	10814	broad.mit.edu	37	5	175308318	175308318	+	3'UTR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPNE4	131034	broad.mit.edu	37	3	131562014	131562014	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPNE4	131034	broad.mit.edu	37	3	131714020	131714020	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPNE8	144402	broad.mit.edu	37	12	39268101	39268101	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPS1	1373	broad.mit.edu	37	2	211456787	211456787	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPS1	1373	broad.mit.edu	37	2	211502642	211502642	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPSF2	53981	broad.mit.edu	37	14	92622823	92622823	+	Missense_Mutation	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPT1A	1374	broad.mit.edu	37	11	68552376	68552376	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPT1B	1375	broad.mit.edu	37	22	51010693	51010693	+	Missense_Mutation	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPVL	54504	broad.mit.edu	37	7	29132418	29132419	+	Intron	DNP	CC	AA	AA			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPZ	8532	broad.mit.edu	37	4	8602996	8602996	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPZ	8532	broad.mit.edu	37	4	8616235	8616235	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CR1	1378	broad.mit.edu	37	1	207739293	207739293	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRADD	8738	broad.mit.edu	37	12	94266666	94266666	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRB1	23418	broad.mit.edu	37	1	197313647	197313647	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRB1	23418	broad.mit.edu	37	1	197332707	197332707	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CREB3L2	64764	broad.mit.edu	37	7	137567078	137567078	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CREB5	9586	broad.mit.edu	37	7	28602053	28602053	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CREB5	9586	broad.mit.edu	37	7	28610010	28610010	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CREB5	9586	broad.mit.edu	37	7	28610045	28610045	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRHR1	1394	broad.mit.edu	37	17	43849307	43849307	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRHR1	1394	broad.mit.edu	37	17	43893965	43893965	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRIM1	51232	broad.mit.edu	37	2	36696410	36696410	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRMP1	1400	broad.mit.edu	37	4	5843112	5843112	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRMP1	1400	broad.mit.edu	37	4	5844826	5844826	+	Silent	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRMP1	1400	broad.mit.edu	37	4	5859110	5859110	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CROCCL1	84809	broad.mit.edu	37	1	16945221	16945221	+	RNA	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CROCC	9696	broad.mit.edu	37	1	17250764	17250764	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CROT	54677	broad.mit.edu	37	7	86991234	86991234	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRP	1401	broad.mit.edu	37	1	159683915	159683915	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRTAM	56253	broad.mit.edu	37	11	122738153	122738153	+	Missense_Mutation	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRY1	1407	broad.mit.edu	37	12	107415804	107415804	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRYGA	1418	broad.mit.edu	37	2	209025469	209025469	+	3'UTR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRYGA	1418	broad.mit.edu	37	2	209025587	209025587	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRYM	1428	broad.mit.edu	37	16	21305550	21305550	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSDE1	7812	broad.mit.edu	37	1	115260765	115260765	+	3'UTR	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSDE1	7812	broad.mit.edu	37	1	115276832	115276832	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSGALNACT1	55790	broad.mit.edu	37	8	19429519	19429519	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	2831874	2831874	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	2966135	2966135	+	Silent	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	3047314	3047314	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	3177603	3177603	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	3293135	3293135	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	3377996	3377996	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	3855503	3855503	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	4368325	4368325	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	4645234	4645234	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	4715562	4715562	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD2	114784	broad.mit.edu	37	1	34145914	34145914	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD2	114784	broad.mit.edu	37	1	34358535	34358535	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD2	114784	broad.mit.edu	37	1	34389595	34389595	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD2	114784	broad.mit.edu	37	1	34404997	34404997	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD2	114784	broad.mit.edu	37	1	34450004	34450004	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD2	114784	broad.mit.edu	37	1	34454445	34454445	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD2	114784	broad.mit.edu	37	1	34474325	34474325	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113243849	113243849	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113249435	113249435	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113249507	113249507	+	Silent	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113253960	113253960	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113569224	113569224	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113697681	113697681	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113725835	113725835	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113727805	113727805	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113841973	113841973	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113842009	113842009	+	Missense_Mutation	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113882020	113882020	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113933644	113933644	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113935050	113935050	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	114431624	114431624	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSNK1G3	1456	broad.mit.edu	37	5	122923771	122923771	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSPP1	79848	broad.mit.edu	37	8	68076869	68076869	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CST11	140880	broad.mit.edu	37	20	23434024	23434024	+	5'Flank	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTBP2	1488	broad.mit.edu	37	10	126678348	126678348	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTCF	10664	broad.mit.edu	37	16	67663240	67663240	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA2	1496	broad.mit.edu	37	2	79494922	79494922	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA2	1496	broad.mit.edu	37	2	79788510	79788510	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA2	1496	broad.mit.edu	37	2	79982893	79982893	+	Intron	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA2	1496	broad.mit.edu	37	2	80217575	80217575	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA2	1496	broad.mit.edu	37	2	80302270	80302270	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA2	1496	broad.mit.edu	37	2	80323940	80323940	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA2	1496	broad.mit.edu	37	2	80333483	80333483	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA2	1496	broad.mit.edu	37	2	80361454	80361454	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA2	1496	broad.mit.edu	37	2	80608166	80608166	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA2	1496	broad.mit.edu	37	2	80686807	80686807	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA2	1496	broad.mit.edu	37	2	80812060	80812060	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA3	29119	broad.mit.edu	37	10	67726293	67726293	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA3	29119	broad.mit.edu	37	10	68040446	68040446	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNBL1	56259	broad.mit.edu	37	20	36431270	36431270	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNBL1	56259	broad.mit.edu	37	20	36450658	36450658	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNND2	1501	broad.mit.edu	37	5	11002389	11002389	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNND2	1501	broad.mit.edu	37	5	11009693	11009693	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNND2	1501	broad.mit.edu	37	5	11199786	11199786	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNND2	1501	broad.mit.edu	37	5	11217554	11217554	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNND2	1501	broad.mit.edu	37	5	11276535	11276535	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNND2	1501	broad.mit.edu	37	5	11277950	11277950	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNND2	1501	broad.mit.edu	37	5	11598258	11598258	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNND2	1501	broad.mit.edu	37	5	11737719	11737719	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNND2	1501	broad.mit.edu	37	5	11743704	11743704	+	Intron	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNND2	1501	broad.mit.edu	37	5	11842045	11842045	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTRC	11330	broad.mit.edu	37	1	15764828	15764828	+	5'Flank	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTSG	1511	broad.mit.edu	37	14	25044274	25044274	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTTNBP2	83992	broad.mit.edu	37	7	117394267	117394267	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUBN	8029	broad.mit.edu	37	10	16976653	16976653	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUBN	8029	broad.mit.edu	37	10	16989131	16989131	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUBN	8029	broad.mit.edu	37	10	16996135	16996135	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUBN	8029	broad.mit.edu	37	10	17142110	17142110	+	Silent	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUL5	8065	broad.mit.edu	37	11	107975024	107975024	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUL7	9820	broad.mit.edu	37	6	43020250	43020250	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUX2	23316	broad.mit.edu	37	12	111487329	111487329	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CWC22	57703	broad.mit.edu	37	2	180830695	180830695	+	Nonsense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CWC27	10283	broad.mit.edu	37	5	64081303	64081303	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CWH43	80157	broad.mit.edu	37	4	48996711	48996711	+	Missense_Mutation	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXCL11	6373	broad.mit.edu	37	4	76957126	76957126	+	Silent	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXorf22	170063	broad.mit.edu	37	X	35990041	35990041	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXorf56	63932	broad.mit.edu	37	X	118675276	118675276	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXorf57	55086	broad.mit.edu	37	X	105910590	105910590	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXorf59	286464	broad.mit.edu	37	X	36103708	36103708	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXorf59	286464	broad.mit.edu	37	X	36156595	36156595	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXorf66	347487	broad.mit.edu	37	X	139038138	139038138	+	Nonsense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYB561	1534	broad.mit.edu	37	17	61513310	61513310	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYBB	1536	broad.mit.edu	37	X	37663180	37663180	+	Silent	SNP	G	T	T	rs139761069		TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP19A1	1588	broad.mit.edu	37	15	51501054	51501054	+	3'UTR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP19A1	1588	broad.mit.edu	37	15	51510758	51510758	+	Frame_Shift_Del	DEL	G	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP2C19	1557	broad.mit.edu	37	10	96602530	96602530	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP2F1	1572	broad.mit.edu	37	19	41970492	41970492	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP2F1	1572	broad.mit.edu	37	19	42010981	42010981	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP4A22	284541	broad.mit.edu	37	1	47608041	47608041	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP4B1	1580	broad.mit.edu	37	1	47279642	47279642	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP4F11	57834	broad.mit.edu	37	19	16038214	16038214	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP4F12	66002	broad.mit.edu	37	19	15782723	15782723	+	5'Flank	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP4F2	8529	broad.mit.edu	37	19	15990137	15990137	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP4V2	285440	broad.mit.edu	37	4	187120038	187120038	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP4X1	260293	broad.mit.edu	37	1	47489375	47489375	+	5'UTR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP7B1	9420	broad.mit.edu	37	8	65509357	65509357	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP7B1	9420	broad.mit.edu	37	8	65679289	65679289	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYTH2	9266	broad.mit.edu	37	19	48978939	48978939	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYTH3	9265	broad.mit.edu	37	7	6204489	6204489	+	3'UTR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYTL1	54360	broad.mit.edu	37	4	5016834	5016834	+	3'UTR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAAM1	23002	broad.mit.edu	37	14	59748548	59748548	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAAM2	23500	broad.mit.edu	37	6	39866660	39866660	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAB1	1600	broad.mit.edu	37	1	57476525	57476525	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAB1	1600	broad.mit.edu	37	1	57526783	57526783	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAB1	1600	broad.mit.edu	37	1	57536551	57536551	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAB1	1600	broad.mit.edu	37	1	57857937	57857937	+	Intron	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAB1	1600	broad.mit.edu	37	1	58199502	58199502	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAB1	1600	broad.mit.edu	37	1	58424574	58424574	+	Intron	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAB2	1601	broad.mit.edu	37	5	39376943	39376943	+	Missense_Mutation	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAB2	1601	broad.mit.edu	37	5	39392565	39392565	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAB2	1601	broad.mit.edu	37	5	39415706	39415706	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DACH2	117154	broad.mit.edu	37	X	86067837	86067837	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAD1	1603	broad.mit.edu	37	14	23043917	23043917	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAD1	1603	broad.mit.edu	37	14	23057909	23057909	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAGLA	747	broad.mit.edu	37	11	61510957	61510957	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAOA	267012	broad.mit.edu	37	13	106119297	106119297	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAP	1611	broad.mit.edu	37	5	10689800	10689800	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DBC1	1620	broad.mit.edu	37	9	121970988	121970989	+	Intron	INS	-	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DBC1	1620	broad.mit.edu	37	9	122075593	122075593	+	Missense_Mutation	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DBF4B	80174	broad.mit.edu	37	17	42815766	42815766	+	Silent	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DBX2	440097	broad.mit.edu	37	12	45410244	45410244	+	Missense_Mutation	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF11	80344	broad.mit.edu	37	14	24587183	24587183	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF11	80344	broad.mit.edu	37	14	24588646	24588646	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF12L1	139170	broad.mit.edu	37	X	125686201	125686201	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF13	25879	broad.mit.edu	37	8	104427471	104427471	+	Missense_Mutation	SNP	A	C	C	rs138240593		TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF13	25879	broad.mit.edu	37	8	104455132	104455132	+	3'UTR	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF17	80067	broad.mit.edu	37	2	172337380	172337380	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF6	55827	broad.mit.edu	37	1	168035033	168035033	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF8L1	139425	broad.mit.edu	37	X	27997190	27997190	+	3'UTR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF8L1	139425	broad.mit.edu	37	X	27998021	27998021	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF8L1	139425	broad.mit.edu	37	X	27998545	27998546	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCDC1	341019	broad.mit.edu	37	11	31327812	31327812	+	Silent	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCD	117159	broad.mit.edu	37	12	55044629	55044629	+	5'Flank	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCHS1	8642	broad.mit.edu	37	11	6644451	6644451	+	Missense_Mutation	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCHS2	54798	broad.mit.edu	37	4	155287496	155287496	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCHS2	54798	broad.mit.edu	37	4	155374483	155374483	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCHS2	54798	broad.mit.edu	37	4	155410794	155410794	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCLRE1A	9937	broad.mit.edu	37	10	115601366	115601366	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCTD	1635	broad.mit.edu	37	4	183836119	183836119	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCT	1638	broad.mit.edu	37	13	95117826	95117826	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCT	1638	broad.mit.edu	37	13	95121143	95121143	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCUN1D3	123879	broad.mit.edu	37	16	20871266	20871267	+	Frame_Shift_Ins	INS	-	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDI2	84301	broad.mit.edu	37	1	15960137	15960137	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX26B	203522	broad.mit.edu	37	X	134680395	134680395	+	Splice_Site	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX26B	203522	broad.mit.edu	37	X	134683487	134683487	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX54	79039	broad.mit.edu	37	12	113599744	113599744	+	Nonsense_Mutation	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX5	1655	broad.mit.edu	37	17	62500324	62500324	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX5	1655	broad.mit.edu	37	17	62500433	62500433	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX60	55601	broad.mit.edu	37	4	169195303	169195303	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX60	55601	broad.mit.edu	37	4	169206434	169206434	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEC1	50514	broad.mit.edu	37	9	117925006	117925006	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEC1	50514	broad.mit.edu	37	9	118095609	118095609	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEFB116	245930	broad.mit.edu	37	20	29891163	29891163	+	Missense_Mutation	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEFB121	245934	broad.mit.edu	37	20	29993845	29993845	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEFB134	613211	broad.mit.edu	37	8	11851647	11851647	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND1A	57706	broad.mit.edu	37	9	126304755	126304755	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND1A	57706	broad.mit.edu	37	9	126322678	126322678	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND2A	27147	broad.mit.edu	37	7	140301825	140301825	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND3	22898	broad.mit.edu	37	8	142161885	142161885	+	Silent	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DERA	51071	broad.mit.edu	37	12	16177039	16177039	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DFNA5	1687	broad.mit.edu	37	7	24758575	24758575	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGCR2	9993	broad.mit.edu	37	22	19112782	19112782	+	5'Flank	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKB	1607	broad.mit.edu	37	7	14188953	14188953	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKB	1607	broad.mit.edu	37	7	14575820	14575820	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKB	1607	broad.mit.edu	37	7	14776483	14776483	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKB	1607	broad.mit.edu	37	7	14811364	14811364	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKB	1607	broad.mit.edu	37	7	14922238	14922238	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKI	9162	broad.mit.edu	37	7	137097011	137097011	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKI	9162	broad.mit.edu	37	7	137237296	137237296	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKI	9162	broad.mit.edu	37	7	137271689	137271689	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKI	9162	broad.mit.edu	37	7	137442440	137442440	+	Intron	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKI	9162	broad.mit.edu	37	7	137445501	137445501	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKI	9162	broad.mit.edu	37	7	137472507	137472507	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKK	139189	broad.mit.edu	37	X	50165245	50165245	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHRS4	10901	broad.mit.edu	37	14	24429018	24429018	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHRS4	10901	broad.mit.edu	37	14	24464148	24464148	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX15	1665	broad.mit.edu	37	4	24541684	24541684	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX30	22907	broad.mit.edu	37	3	47882657	47882657	+	Silent	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX40P1	653645	broad.mit.edu	37	17	58085602	58085602	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIAPH2	1730	broad.mit.edu	37	X	96319240	96319240	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIAPH2	1730	broad.mit.edu	37	X	96634023	96634023	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIAPH3	81624	broad.mit.edu	37	13	60635683	60635683	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIRC3	729582	broad.mit.edu	37	2	218552492	218552492	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DKC1	1736	broad.mit.edu	37	X	153996928	153996928	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DKC1	1736	broad.mit.edu	37	X	154004885	154004885	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLEC1	9940	broad.mit.edu	37	3	38134218	38134218	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLEU1	10301	broad.mit.edu	37	13	50830527	50830527	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLG1	1739	broad.mit.edu	37	3	196771424	196771425	+	3'UTR	DEL	CA	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLG2	1740	broad.mit.edu	37	11	83525566	83525566	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLG2	1740	broad.mit.edu	37	11	84379012	84379012	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLG2	1740	broad.mit.edu	37	11	84731958	84731958	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLG2	1740	broad.mit.edu	37	11	85118025	85118025	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLG5	9231	broad.mit.edu	37	10	79626858	79626858	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLGAP1	9229	broad.mit.edu	37	18	3879381	3879381	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLGAP1	9229	broad.mit.edu	37	18	4176817	4176817	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLX1	1745	broad.mit.edu	37	2	172950375	172950375	+	5'UTR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLX5	1749	broad.mit.edu	37	7	96650308	96650308	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMD	1756	broad.mit.edu	37	X	31159961	31159961	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMD	1756	broad.mit.edu	37	X	31201075	31201075	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMD	1756	broad.mit.edu	37	X	31222432	31222432	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMD	1756	broad.mit.edu	37	X	31397153	31397153	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMD	1756	broad.mit.edu	37	X	31496456	31496456	+	Silent	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMD	1756	broad.mit.edu	37	X	31544001	31544002	+	Intron	DNP	CC	AA	AA			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMD	1756	broad.mit.edu	37	X	31697745	31697745	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMD	1756	broad.mit.edu	37	X	31817011	31817011	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMD	1756	broad.mit.edu	37	X	31947414	31947414	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMD	1756	broad.mit.edu	37	X	32261091	32261092	+	Intron	DNP	GG	TT	TT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMD	1756	broad.mit.edu	37	X	32486717	32486717	+	Silent	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMD	1756	broad.mit.edu	37	X	32533498	32533498	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMD	1756	broad.mit.edu	37	X	32538850	32538850	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMD	1756	broad.mit.edu	37	X	33146313	33146313	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMPK	1760	broad.mit.edu	37	19	46278330	46278330	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMRT3	58524	broad.mit.edu	37	9	990773	990773	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMRT3	58524	broad.mit.edu	37	9	991129	991129	+	3'UTR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH10	196385	broad.mit.edu	37	12	124358954	124358955	+	Intron	DNP	CC	AG	AG			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH10	196385	broad.mit.edu	37	12	124382672	124382672	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH11	8701	broad.mit.edu	37	7	21679077	21679077	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH11	8701	broad.mit.edu	37	7	21759820	21759820	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH11	8701	broad.mit.edu	37	7	21932151	21932151	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH14	127602	broad.mit.edu	37	1	225167865	225167865	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH14	127602	broad.mit.edu	37	1	225249115	225249115	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH1	25981	broad.mit.edu	37	3	52416609	52416609	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH3	55567	broad.mit.edu	37	16	21008707	21008707	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH3	55567	broad.mit.edu	37	16	21133419	21133419	+	Nonsense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH5	1767	broad.mit.edu	37	5	13735346	13735346	+	Silent	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH5	1767	broad.mit.edu	37	5	13811694	13811694	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH5	1767	broad.mit.edu	37	5	13845373	13845373	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH8	1769	broad.mit.edu	37	6	38758297	38758297	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11550479	11550479	+	Silent	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11554648	11554648	+	Intron	DEL	G	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11640186	11640186	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11644867	11644867	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11672373	11672373	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11687489	11687489	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11819806	11819806	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11819808	11819808	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJA1	3301	broad.mit.edu	37	9	33036539	33036539	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJB4	11080	broad.mit.edu	37	1	78478905	78478905	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC14	85406	broad.mit.edu	37	12	56217010	56217010	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC6	9829	broad.mit.edu	37	1	65860522	65860522	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC6	9829	broad.mit.edu	37	1	65874456	65874456	+	Missense_Mutation	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNHD1	144132	broad.mit.edu	37	11	6587839	6587839	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNM3	26052	broad.mit.edu	37	1	171875151	171875151	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNM3	26052	broad.mit.edu	37	1	172007640	172007640	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNMT3B	1789	broad.mit.edu	37	20	31379386	31379386	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK10	55619	broad.mit.edu	37	2	225659773	225659773	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK11	139818	broad.mit.edu	37	X	117639447	117639447	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK11	139818	broad.mit.edu	37	X	117701949	117701949	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK1	1793	broad.mit.edu	37	10	128840848	128840848	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK1	1793	broad.mit.edu	37	10	129074636	129074636	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK2	1794	broad.mit.edu	37	5	169335529	169335529	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK2	1794	broad.mit.edu	37	5	169445596	169445596	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK4	9732	broad.mit.edu	37	7	111438884	111438884	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK4	9732	broad.mit.edu	37	7	111547503	111547503	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK4	9732	broad.mit.edu	37	7	111755434	111755434	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK8	81704	broad.mit.edu	37	9	325531	325531	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOK6	220164	broad.mit.edu	37	18	67084495	67084495	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOK6	220164	broad.mit.edu	37	18	67126445	67126445	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPAGT1	1798	broad.mit.edu	37	11	118968927	118968927	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPF3	8110	broad.mit.edu	37	14	73137930	73137930	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPH5	51611	broad.mit.edu	37	1	101458158	101458158	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP10	57628	broad.mit.edu	37	2	115689085	115689085	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP10	57628	broad.mit.edu	37	2	115790981	115790981	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP10	57628	broad.mit.edu	37	2	116105599	116105599	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP10	57628	broad.mit.edu	37	2	116171640	116171640	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP10	57628	broad.mit.edu	37	2	116283730	116283730	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP10	57628	broad.mit.edu	37	2	116599815	116599815	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP4	1803	broad.mit.edu	37	2	162902418	162902418	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP6	1804	broad.mit.edu	37	7	153584824	153584824	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP6	1804	broad.mit.edu	37	7	153627115	153627116	+	Intron	DNP	CC	AA	AA			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP6	1804	broad.mit.edu	37	7	153789297	153789297	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP6	1804	broad.mit.edu	37	7	154172127	154172127	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP6	1804	broad.mit.edu	37	7	154172176	154172176	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP6	1804	broad.mit.edu	37	7	154237654	154237654	+	Silent	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP6	1804	broad.mit.edu	37	7	154242464	154242464	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP6	1804	broad.mit.edu	37	7	154266681	154266681	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP6	1804	broad.mit.edu	37	7	154371898	154371898	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP6	1804	broad.mit.edu	37	7	154375380	154375380	+	Intron	SNP	C	A	A	rs79449074	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP6	1804	broad.mit.edu	37	7	154619002	154619002	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPPA2	151871	broad.mit.edu	37	3	109031277	109031277	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPY19L2P2	349152	broad.mit.edu	37	7	102886571	102886571	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPY19L2	283417	broad.mit.edu	37	12	64014966	64014966	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPYSL3	1809	broad.mit.edu	37	5	146780983	146780983	+	Intron	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPYS	1807	broad.mit.edu	37	8	105393350	105393350	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPYS	1807	broad.mit.edu	37	8	105464730	105464730	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DRD2	1813	broad.mit.edu	37	11	113287555	113287555	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DRD3	1814	broad.mit.edu	37	3	113875066	113875066	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DRP2	1821	broad.mit.edu	37	X	100496798	100496798	+	Nonsense_Mutation	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DRP2	1821	broad.mit.edu	37	X	100496812	100496812	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DRP2	1821	broad.mit.edu	37	X	100509264	100509264	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSC1	1823	broad.mit.edu	37	18	28711672	28711672	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSC3	1825	broad.mit.edu	37	18	28588383	28588383	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSC3	1825	broad.mit.edu	37	18	28605691	28605691	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSCAM	1826	broad.mit.edu	37	21	42200959	42200959	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSE	29940	broad.mit.edu	37	6	116725070	116725070	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSE	29940	broad.mit.edu	37	6	116752188	116752188	+	Missense_Mutation	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSG1	1828	broad.mit.edu	37	18	28919734	28919734	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSPP	1834	broad.mit.edu	37	4	88535154	88535154	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSP	1832	broad.mit.edu	37	6	7582930	7582930	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DST	667	broad.mit.edu	37	6	56347577	56347577	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DST	667	broad.mit.edu	37	6	56393681	56393681	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DST	667	broad.mit.edu	37	6	56480811	56480811	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DTHD1	401124	broad.mit.edu	37	4	36296646	36296646	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DTX1	1840	broad.mit.edu	37	12	113530994	113530994	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUOX1	53905	broad.mit.edu	37	15	45456914	45456914	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP16	80824	broad.mit.edu	37	12	12673023	12673023	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP27	92235	broad.mit.edu	37	1	167086461	167086461	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP27	92235	broad.mit.edu	37	1	167095183	167095183	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP27	92235	broad.mit.edu	37	1	167097132	167097132	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNC1H1	1778	broad.mit.edu	37	14	102508568	102508568	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNC1I1	1780	broad.mit.edu	37	7	95616674	95616674	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNC1I1	1780	broad.mit.edu	37	7	95686618	95686618	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNC2H1	79659	broad.mit.edu	37	11	103013848	103013848	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNC2H1	79659	broad.mit.edu	37	11	103178455	103178455	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYRK4	8798	broad.mit.edu	37	12	4700539	4700539	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYSF	8291	broad.mit.edu	37	2	71781014	71781014	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DZIP3	9666	broad.mit.edu	37	3	108329944	108329944	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DZIP3	9666	broad.mit.edu	37	3	108392892	108392892	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EAF1	85403	broad.mit.edu	37	3	15476049	15476049	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EBF1	1879	broad.mit.edu	37	5	158236646	158236646	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EBF1	1879	broad.mit.edu	37	5	158250217	158250217	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EBF1	1879	broad.mit.edu	37	5	158439749	158439749	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ECE2	9718	broad.mit.edu	37	3	183996160	183996160	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ECM2	1842	broad.mit.edu	37	9	95262814	95262814	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ECT2L	345930	broad.mit.edu	37	6	139178314	139178314	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ECT2	1894	broad.mit.edu	37	3	172480315	172480315	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EDA2R	60401	broad.mit.edu	37	X	65819742	65819742	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EDA	1896	broad.mit.edu	37	X	68923351	68923351	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EDIL3	10085	broad.mit.edu	37	5	83479883	83479883	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EDIL3	10085	broad.mit.edu	37	5	83525567	83525567	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EDIL3	10085	broad.mit.edu	37	5	83542241	83542241	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EDIL3	10085	broad.mit.edu	37	5	83549878	83549878	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EEF2	1938	broad.mit.edu	37	19	3979399	3979399	+	Silent	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EEFSEC	60678	broad.mit.edu	37	3	127934664	127934664	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFCAB4B	84766	broad.mit.edu	37	12	3736779	3736779	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFCAB6	64800	broad.mit.edu	37	22	44209473	44209473	+	5'Flank	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFHC2	80258	broad.mit.edu	37	X	44062480	44062480	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFHC2	80258	broad.mit.edu	37	X	44062489	44062489	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFNA3	1944	broad.mit.edu	37	1	155058673	155058673	+	Missense_Mutation	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGFL6	25975	broad.mit.edu	37	X	13624346	13624346	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGFLAM	133584	broad.mit.edu	37	5	38427131	38427131	+	Nonsense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGFR	1956	broad.mit.edu	37	7	55107437	55107437	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGFR	1956	broad.mit.edu	37	7	55234663	55234663	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGF	1950	broad.mit.edu	37	4	110901367	110901367	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGF	1950	broad.mit.edu	37	4	110925817	110925817	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGLN3	112399	broad.mit.edu	37	14	34400235	34400235	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF2AK3	9451	broad.mit.edu	37	2	88892738	88892738	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF2B3	8891	broad.mit.edu	37	1	45316547	45316547	+	3'UTR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF2B4	8890	broad.mit.edu	37	2	27591875	27591875	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF2C3	192669	broad.mit.edu	37	1	36521447	36521447	+	3'UTR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF2S3	1968	broad.mit.edu	37	X	24085946	24085946	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF3F	8665	broad.mit.edu	37	11	8008914	8008914	+	Silent	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF3IP1	442720	broad.mit.edu	37	7	109600041	109600041	+	Silent	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF4E1B	253314	broad.mit.edu	37	5	176072392	176072392	+	Silent	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF4G1	1981	broad.mit.edu	37	3	184035686	184035686	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELAVL2	1993	broad.mit.edu	37	9	23736728	23736728	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELAVL2	1993	broad.mit.edu	37	9	23776072	23776072	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELAVL3	1995	broad.mit.edu	37	19	11568959	11568959	+	Silent	SNP	C	T	T	rs144875735	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELAVL4	1996	broad.mit.edu	37	1	50595074	50595074	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELF1	1997	broad.mit.edu	37	13	41517129	41517129	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELF4	2000	broad.mit.edu	37	X	129206480	129206480	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELMO1	9844	broad.mit.edu	37	7	36934697	36934697	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELMO1	9844	broad.mit.edu	37	7	37052877	37052877	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EMILIN2	84034	broad.mit.edu	37	18	2909624	2909624	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EML1	2009	broad.mit.edu	37	14	100364625	100364625	+	Missense_Mutation	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EMR1	2015	broad.mit.edu	37	19	6924285	6924285	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EMR3	84658	broad.mit.edu	37	19	14757939	14757939	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EMR3	84658	broad.mit.edu	37	19	14772861	14772861	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENAM	10117	broad.mit.edu	37	4	71509884	71509884	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENOSF1	55556	broad.mit.edu	37	18	672785	672785	+	3'UTR	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENOX1	55068	broad.mit.edu	37	13	43861290	43861290	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENOX1	55068	broad.mit.edu	37	13	43900674	43900674	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENOX1	55068	broad.mit.edu	37	13	43930300	43930300	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENOX2	10495	broad.mit.edu	37	X	129761813	129761813	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENPP3	5169	broad.mit.edu	37	6	131995303	131995303	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENPP7	339221	broad.mit.edu	37	17	77708904	77708904	+	Silent	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EP400	57634	broad.mit.edu	37	12	132552634	132552634	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB41L3	23136	broad.mit.edu	37	18	5395638	5395638	+	Silent	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB41L3	23136	broad.mit.edu	37	18	5416024	5416024	+	Silent	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB41L3	23136	broad.mit.edu	37	18	5416170	5416170	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB41L3	23136	broad.mit.edu	37	18	5491195	5491195	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB41L3	23136	broad.mit.edu	37	18	5571954	5571954	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB41L3	23136	broad.mit.edu	37	18	5627940	5627940	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPDR1	54749	broad.mit.edu	37	7	37989946	37989946	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA10	284656	broad.mit.edu	37	1	38185567	38185567	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA2	1969	broad.mit.edu	37	1	16474723	16474723	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA3	2042	broad.mit.edu	37	3	89462476	89462476	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA5	2044	broad.mit.edu	37	4	66199884	66199884	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA5	2044	broad.mit.edu	37	4	66439635	66439635	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA5	2044	broad.mit.edu	37	4	66439646	66439646	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA5	2044	broad.mit.edu	37	4	66467531	66467531	+	Silent	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA6	285220	broad.mit.edu	37	3	96608271	96608272	+	Intron	DNP	GG	TT	TT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA6	285220	broad.mit.edu	37	3	96846343	96846343	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA6	285220	broad.mit.edu	37	3	97064224	97064224	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA7	2045	broad.mit.edu	37	6	93965485	93965485	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA7	2045	broad.mit.edu	37	6	93982069	93982069	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB1	2047	broad.mit.edu	37	3	134594412	134594412	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB1	2047	broad.mit.edu	37	3	134638791	134638791	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB1	2047	broad.mit.edu	37	3	134804669	134804669	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB1	2047	broad.mit.edu	37	3	134807933	134807933	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB1	2047	broad.mit.edu	37	3	134890320	134890320	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB1	2047	broad.mit.edu	37	3	134911538	134911538	+	Missense_Mutation	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB6	2051	broad.mit.edu	37	7	142562343	142562343	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB6	2051	broad.mit.edu	37	7	142565367	142565367	+	Silent	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPRS	2058	broad.mit.edu	37	1	220162134	220162134	+	Missense_Mutation	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPSTI1	94240	broad.mit.edu	37	13	43470755	43470755	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERBB4	2066	broad.mit.edu	37	2	212537931	212537931	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERBB4	2066	broad.mit.edu	37	2	212615490	212615490	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERBB4	2066	broad.mit.edu	37	2	213290881	213290881	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERC1	23085	broad.mit.edu	37	12	1137202	1137202	+	Missense_Mutation	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERC2	26059	broad.mit.edu	37	3	55693535	55693535	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERC2	26059	broad.mit.edu	37	3	56183085	56183085	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERCC4	2072	broad.mit.edu	37	16	14042044	14042044	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERCC6L	54821	broad.mit.edu	37	X	71426904	71426904	+	Nonsense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERCC6	2074	broad.mit.edu	37	10	50725170	50725170	+	Intron	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERGIC2	51290	broad.mit.edu	37	12	29496337	29496337	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERG	2078	broad.mit.edu	37	21	39912161	39912161	+	Intron	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERG	2078	broad.mit.edu	37	21	39990642	39990642	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERI2	112479	broad.mit.edu	37	16	20865107	20865107	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERN1	2081	broad.mit.edu	37	17	62175664	62175664	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESRRB	2103	broad.mit.edu	37	14	76905730	76905731	+	Missense_Mutation	DNP	TG	CT	CT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESRRG	2104	broad.mit.edu	37	1	217214363	217214363	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESX1	80712	broad.mit.edu	37	X	103498819	103498819	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ETV6	2120	broad.mit.edu	37	12	11978546	11978546	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ETV6	2120	broad.mit.edu	37	12	12264150	12264150	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ETV7	51513	broad.mit.edu	37	6	36346503	36346503	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EVC	2121	broad.mit.edu	37	4	5742738	5742738	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOC4	60412	broad.mit.edu	37	7	133507510	133507510	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOC4	60412	broad.mit.edu	37	7	133722170	133722170	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOC6B	23233	broad.mit.edu	37	2	72503300	72503300	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOC6B	23233	broad.mit.edu	37	2	72962079	72962079	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOSC7	23016	broad.mit.edu	37	3	45038690	45038690	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EYA1	2138	broad.mit.edu	37	8	72181967	72181967	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EYA1	2138	broad.mit.edu	37	8	72229658	72229658	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EYA2	2139	broad.mit.edu	37	20	45617908	45617908	+	Intron	SNP	C	A	A	rs138855383	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EYA2	2139	broad.mit.edu	37	20	45633383	45633383	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EYA2	2139	broad.mit.edu	37	20	45811892	45811892	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EYA4	2070	broad.mit.edu	37	6	133636822	133636822	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EYA4	2070	broad.mit.edu	37	6	133817554	133817554	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EYS	346007	broad.mit.edu	37	6	64587480	64587480	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EYS	346007	broad.mit.edu	37	6	64708987	64708987	+	Missense_Mutation	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EYS	346007	broad.mit.edu	37	6	64983090	64983090	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EYS	346007	broad.mit.edu	37	6	65096427	65096427	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F2RL2	2151	broad.mit.edu	37	5	75914407	75914407	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F5	2153	broad.mit.edu	37	1	169492510	169492510	+	Silent	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F5	2153	broad.mit.edu	37	1	169524262	169524262	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F5	2153	broad.mit.edu	37	1	169547045	169547045	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F8	2157	broad.mit.edu	37	X	154115831	154115831	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F8	2157	broad.mit.edu	37	X	154130237	154130237	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F8	2157	broad.mit.edu	37	X	154157976	154157976	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAIM	55179	broad.mit.edu	37	3	138340324	138340324	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM107A	11170	broad.mit.edu	37	3	58589478	58589478	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM110C	642273	broad.mit.edu	37	2	41715	41715	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM117B	150864	broad.mit.edu	37	2	203560583	203560583	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM120A	23196	broad.mit.edu	37	9	96323466	96323466	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM122B	159090	broad.mit.edu	37	X	133906487	133906487	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM123A	219287	broad.mit.edu	37	13	25744616	25744616	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM123B	139285	broad.mit.edu	37	X	63411366	63411366	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM128A	653784	broad.mit.edu	37	2	132241848	132241848	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM133A	286499	broad.mit.edu	37	X	92960997	92960997	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM135B	51059	broad.mit.edu	37	8	139153486	139153486	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM135B	51059	broad.mit.edu	37	8	139190692	139190692	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM135B	51059	broad.mit.edu	37	8	139196897	139196897	+	Intron	SNP	C	A	A	rs151270726	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM135B	51059	broad.mit.edu	37	8	139263361	139263361	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM135B	51059	broad.mit.edu	37	8	139400071	139400071	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM13A	10144	broad.mit.edu	37	4	89972074	89972074	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM13C	220965	broad.mit.edu	37	10	61012527	61012527	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM13C	220965	broad.mit.edu	37	10	61030334	61030334	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM13C	220965	broad.mit.edu	37	10	61115509	61115509	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM150B	285016	broad.mit.edu	37	2	283054	283054	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM151B	167555	broad.mit.edu	37	5	79834384	79834384	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM154A	158297	broad.mit.edu	37	9	18928115	18928115	+	Missense_Mutation	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM155A	728215	broad.mit.edu	37	13	108105229	108105229	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM155A	728215	broad.mit.edu	37	13	108339628	108339628	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM156A	29057	broad.mit.edu	37	X	53020936	53020936	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM160A1	729830	broad.mit.edu	37	4	152353081	152353081	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM167A	83648	broad.mit.edu	37	8	11301401	11301401	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM169A	26049	broad.mit.edu	37	5	74095109	74095109	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM169B	283777	broad.mit.edu	37	15	99045882	99045882	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM171A1	221061	broad.mit.edu	37	10	15256254	15256254	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM179A	165186	broad.mit.edu	37	2	29266513	29266513	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM179B	23116	broad.mit.edu	37	14	45473285	45473285	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM180A	389558	broad.mit.edu	37	7	135419037	135419037	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM184A	79632	broad.mit.edu	37	6	119444600	119444600	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM190A	401145	broad.mit.edu	37	4	91199559	91199559	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM190A	401145	broad.mit.edu	37	4	92194934	92194934	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM190A	401145	broad.mit.edu	37	4	92277973	92277973	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM19A1	407738	broad.mit.edu	37	3	68395349	68395349	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM19A1	407738	broad.mit.edu	37	3	68501853	68501853	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM19A2	338811	broad.mit.edu	37	12	62147536	62147536	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM19A4	151647	broad.mit.edu	37	3	68811718	68811718	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM27L	284123	broad.mit.edu	37	17	21826341	21826341	+	RNA	SNP	C	G	G	rs116150167	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM35A	54537	broad.mit.edu	37	10	88876745	88876745	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM35A	54537	broad.mit.edu	37	10	88911685	88911685	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM38B	63895	broad.mit.edu	37	18	10766309	10766309	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM38B	63895	broad.mit.edu	37	18	10885977	10885977	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM3D	131177	broad.mit.edu	37	3	58639444	58639444	+	Silent	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM41C	284593	broad.mit.edu	37	1	809450	809450	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM47B	170062	broad.mit.edu	37	X	34961919	34961919	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM47C	442444	broad.mit.edu	37	X	37027040	37027040	+	Missense_Mutation	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM49A	81553	broad.mit.edu	37	2	16794657	16794657	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM49A	81553	broad.mit.edu	37	2	16818758	16818758	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM55A	120400	broad.mit.edu	37	11	114426199	114426199	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM55D	54827	broad.mit.edu	37	11	114454275	114454275	+	Intron	DEL	C	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM5B	57795	broad.mit.edu	37	1	177214753	177214753	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM5B	57795	broad.mit.edu	37	1	177223094	177223094	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM5B	57795	broad.mit.edu	37	1	177232154	177232154	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM5B	57795	broad.mit.edu	37	1	177242683	177242683	+	Silent	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM5B	57795	broad.mit.edu	37	1	177242734	177242734	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM5C	339479	broad.mit.edu	37	1	190223962	190223962	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM5C	339479	broad.mit.edu	37	1	190234118	190234118	+	Silent	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM5C	339479	broad.mit.edu	37	1	190370137	190370137	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM66C	440078	broad.mit.edu	37	12	8344046	8344046	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM66D	100132923	broad.mit.edu	37	8	12236194	12236194	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM66D	100132923	broad.mit.edu	37	8	12237455	12237455	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM71B	153745	broad.mit.edu	37	5	156590429	156590429	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM71F1	84691	broad.mit.edu	37	7	128365434	128365434	+	Intron	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM74A3	728495	broad.mit.edu	37	9	40715908	40715908	+	RNA	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM75A6	389730	broad.mit.edu	37	9	43628916	43628916	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM78A	286336	broad.mit.edu	37	9	134136572	134136572	+	Silent	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM7A3	89837	broad.mit.edu	37	15	32698687	32698687	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM83A	84985	broad.mit.edu	37	8	124203855	124203855	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM83B	222584	broad.mit.edu	37	6	54744460	54744460	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM83B	222584	broad.mit.edu	37	6	54746728	54746728	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM98A	25940	broad.mit.edu	37	2	33824397	33824397	+	5'Flank	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM9B	171483	broad.mit.edu	37	X	9080239	9080239	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FANCF	2188	broad.mit.edu	37	11	22647320	22647320	+	Nonsense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FANCI	55215	broad.mit.edu	37	15	89848997	89848997	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FARS2	10667	broad.mit.edu	37	6	5353249	5353249	+	Intron	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FARS2	10667	broad.mit.edu	37	6	5448296	5448296	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FARSB	10056	broad.mit.edu	37	2	223511718	223511718	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FASLG	356	broad.mit.edu	37	1	172634624	172634625	+	Intron	DNP	CC	AA	AA			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT3	120114	broad.mit.edu	37	11	92088448	92088448	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT3	120114	broad.mit.edu	37	11	92143953	92143953	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT3	120114	broad.mit.edu	37	11	92384694	92384694	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT3	120114	broad.mit.edu	37	11	92384702	92384702	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT3	120114	broad.mit.edu	37	11	92396525	92396525	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT3	120114	broad.mit.edu	37	11	92523337	92523337	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT3	120114	broad.mit.edu	37	11	92530980	92530980	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT3	120114	broad.mit.edu	37	11	92532335	92532335	+	Silent	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT4	79633	broad.mit.edu	37	4	126241863	126241863	+	Missense_Mutation	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN2	2201	broad.mit.edu	37	5	127670751	127670751	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN2	2201	broad.mit.edu	37	5	127680979	127680979	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN2	2201	broad.mit.edu	37	5	127710241	127710241	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXL13	222235	broad.mit.edu	37	7	102669029	102669029	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXL7	23194	broad.mit.edu	37	5	15552717	15552717	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXL7	23194	broad.mit.edu	37	5	15552904	15552904	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXL7	23194	broad.mit.edu	37	5	15596986	15596986	+	Intron	SNP	C	A	A	rs80233469	byFrequency;by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXL7	23194	broad.mit.edu	37	5	15628622	15628622	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXL7	23194	broad.mit.edu	37	5	15664327	15664327	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXL7	23194	broad.mit.edu	37	5	15693099	15693099	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXL7	23194	broad.mit.edu	37	5	15725722	15725722	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXL7	23194	broad.mit.edu	37	5	15789278	15789278	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXL7	23194	broad.mit.edu	37	5	15821022	15821022	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXL7	23194	broad.mit.edu	37	5	15847350	15847350	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO10	26267	broad.mit.edu	37	9	37515624	37515624	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO18	84893	broad.mit.edu	37	10	5936588	5936589	+	Intron	DNP	GG	TT	TT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXW10	10517	broad.mit.edu	37	17	18668095	18668095	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXW11	23291	broad.mit.edu	37	5	171408960	171408960	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXW4	6468	broad.mit.edu	37	10	103431514	103431514	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCER1A	2205	broad.mit.edu	37	1	159275854	159275854	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCER1G	2207	broad.mit.edu	37	1	161188844	161188844	+	3'UTR	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCGR2B	2213	broad.mit.edu	37	1	161645599	161645599	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCGR2B	2213	broad.mit.edu	37	1	161645852	161645852	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCGR2C	9103	broad.mit.edu	37	1	161561220	161561220	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCN2	2220	broad.mit.edu	37	9	137776647	137776647	+	Intron	SNP	C	A	A	rs55985459		TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRL1	115350	broad.mit.edu	37	1	157765808	157765808	+	3'UTR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRL3	115352	broad.mit.edu	37	1	157650607	157650607	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRL3	115352	broad.mit.edu	37	1	157665031	157665031	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRL5	83416	broad.mit.edu	37	1	157488180	157488180	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRL5	83416	broad.mit.edu	37	1	157497520	157497520	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRL5	83416	broad.mit.edu	37	1	157512394	157512394	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRLB	127943	broad.mit.edu	37	1	161692650	161692650	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FECH	2235	broad.mit.edu	37	18	55222263	55222263	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FER1L6	654463	broad.mit.edu	37	8	124925230	124925230	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FER1L6	654463	broad.mit.edu	37	8	125127590	125127590	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FER	2241	broad.mit.edu	37	5	108149489	108149489	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FER	2241	broad.mit.edu	37	5	108387796	108387796	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FEZF1	389549	broad.mit.edu	37	7	121944292	121944292	+	Missense_Mutation	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGA	2243	broad.mit.edu	37	4	155505595	155505595	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGD4	121512	broad.mit.edu	37	12	32761011	32761011	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGF10	2255	broad.mit.edu	37	5	44388352	44388352	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGF12	2257	broad.mit.edu	37	3	192053158	192053158	+	Missense_Mutation	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGF13	2258	broad.mit.edu	37	X	137761108	137761108	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGF13	2258	broad.mit.edu	37	X	137981474	137981474	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGF13	2258	broad.mit.edu	37	X	137996187	137996187	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGF13	2258	broad.mit.edu	37	X	138152820	138152820	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGF13	2258	broad.mit.edu	37	X	138219340	138219340	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGF14	2259	broad.mit.edu	37	13	102521019	102521019	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGF14	2259	broad.mit.edu	37	13	102810570	102810570	+	Intron	SNP	C	T	T	rs140527622	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGF14	2259	broad.mit.edu	37	13	102826974	102826974	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGF14	2259	broad.mit.edu	37	13	102853871	102853871	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGF14	2259	broad.mit.edu	37	13	102922586	102922586	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGF6	2251	broad.mit.edu	37	12	4543353	4543353	+	3'UTR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGF6	2251	broad.mit.edu	37	12	4554566	4554566	+	Silent	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGFR1	2260	broad.mit.edu	37	8	38286871	38286871	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGFR1	2260	broad.mit.edu	37	8	38286887	38286887	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FHIT	2272	broad.mit.edu	37	3	59933752	59933752	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FHIT	2272	broad.mit.edu	37	3	60932279	60932279	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FHIT	2272	broad.mit.edu	37	3	61115166	61115166	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FHL1	2273	broad.mit.edu	37	X	135288734	135288734	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FKBP10	60681	broad.mit.edu	37	17	39974872	39974872	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FKBP9	11328	broad.mit.edu	37	7	33014218	33014218	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FKTN	2218	broad.mit.edu	37	9	108317569	108317569	+	5'Flank	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLAD1	80308	broad.mit.edu	37	1	154962044	154962044	+	Silent	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG2	388698	broad.mit.edu	37	1	152325990	152325990	+	Missense_Mutation	SNP	A	T	T	rs140606934		TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152283550	152283550	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ10661	286042	broad.mit.edu	37	8	8098069	8098069	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ22536	401237	broad.mit.edu	37	6	21903014	21903014	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ26850	400710	broad.mit.edu	37	19	50563218	50563218	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ33360	401172	broad.mit.edu	37	5	6313332	6313332	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ33360	401172	broad.mit.edu	37	5	6337257	6337257	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ35024	401491	broad.mit.edu	37	9	2428714	2428714	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ37543	285668	broad.mit.edu	37	5	60931673	60931673	+	5'Flank	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ43860	389690	broad.mit.edu	37	8	142470562	142470562	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ43950	347127	broad.mit.edu	37	9	84532169	84532169	+	3'UTR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ46321	389763	broad.mit.edu	37	9	84609843	84609843	+	Silent	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLNC	2318	broad.mit.edu	37	7	128495051	128495051	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLT3	2322	broad.mit.edu	37	13	28624273	28624273	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMN2	56776	broad.mit.edu	37	1	240370945	240370945	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMN2	56776	broad.mit.edu	37	1	240493995	240493995	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMN2	56776	broad.mit.edu	37	1	240635700	240635700	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMNL3	91010	broad.mit.edu	37	12	50043862	50043862	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMO1	2326	broad.mit.edu	37	1	171234088	171234088	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMO1	2326	broad.mit.edu	37	1	171251350	171251350	+	Missense_Mutation	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMO2	2327	broad.mit.edu	37	1	171172959	171172959	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMOD	2331	broad.mit.edu	37	1	203272658	203272658	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMR1	2332	broad.mit.edu	37	X	147011976	147011976	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FNBP1	23048	broad.mit.edu	37	9	132662795	132662795	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FNDC4	64838	broad.mit.edu	37	2	27716859	27716859	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FNIP2	57600	broad.mit.edu	37	4	159780351	159780351	+	Missense_Mutation	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXA2	3170	broad.mit.edu	37	20	22566233	22566233	+	5'Flank	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXD4L3	286380	broad.mit.edu	37	9	70918901	70918901	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXM1	2305	broad.mit.edu	37	12	2981044	2981044	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXP2	93986	broad.mit.edu	37	7	114133013	114133013	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXP3	50943	broad.mit.edu	37	X	49109720	49109720	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FREM1	158326	broad.mit.edu	37	9	14746750	14746750	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FREM1	158326	broad.mit.edu	37	9	14779644	14779644	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FREM1	158326	broad.mit.edu	37	9	14824780	14824780	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FREM1	158326	broad.mit.edu	37	9	14859570	14859570	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRG1B	284802	broad.mit.edu	37	20	29621707	29621707	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRG1B	284802	broad.mit.edu	37	20	29628911	29628911	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRG1B	284802	broad.mit.edu	37	20	29650513	29650513	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMD4A	55691	broad.mit.edu	37	10	13993574	13993574	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMD4A	55691	broad.mit.edu	37	10	14212024	14212024	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMD4A	55691	broad.mit.edu	37	10	14293454	14293454	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMD5	84978	broad.mit.edu	37	15	44241534	44241534	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMD6	122786	broad.mit.edu	37	14	52174735	52174735	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMD7	90167	broad.mit.edu	37	X	131217354	131217354	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMD7	90167	broad.mit.edu	37	X	131219862	131219862	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMPD1	22844	broad.mit.edu	37	9	37673501	37673501	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMPD2	143162	broad.mit.edu	37	10	49420032	49420032	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMPD4	9758	broad.mit.edu	37	X	12277198	12277198	+	Intron	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMPD4	9758	broad.mit.edu	37	X	12296363	12296363	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMPD4	9758	broad.mit.edu	37	X	12308717	12308717	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMPD4	9758	broad.mit.edu	37	X	12712639	12712639	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMPD4	9758	broad.mit.edu	37	X	12738578	12738578	+	Intron	SNP	G	T	T	rs28461856		TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSCB	84075	broad.mit.edu	37	14	44973706	44973706	+	3'UTR	DEL	A	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSCB	84075	broad.mit.edu	37	14	44974965	44974965	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSHB	2488	broad.mit.edu	37	11	30255431	30255431	+	3'UTR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSHR	2492	broad.mit.edu	37	2	49293797	49293797	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSHR	2492	broad.mit.edu	37	2	49295667	49295667	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSTL5	56884	broad.mit.edu	37	4	163032428	163032429	+	Missense_Mutation	DNP	GT	AA	AA			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FUBP1	8880	broad.mit.edu	37	1	78432681	78432681	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FUT9	10690	broad.mit.edu	37	6	96651080	96651080	+	Missense_Mutation	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FUT9	10690	broad.mit.edu	37	6	96651793	96651793	+	Silent	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FXN	2395	broad.mit.edu	37	9	71661388	71661388	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FYB	2533	broad.mit.edu	37	5	39149565	39149565	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
G6PD	2539	broad.mit.edu	37	X	153761372	153761372	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAA	2548	broad.mit.edu	37	17	78078651	78078651	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAB3	139716	broad.mit.edu	37	X	153950177	153950177	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABBR2	9568	broad.mit.edu	37	9	101134183	101134183	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRA2	2555	broad.mit.edu	37	4	46305409	46305409	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRA3	2556	broad.mit.edu	37	X	151420159	151420159	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRA3	2556	broad.mit.edu	37	X	151453203	151453203	+	Silent	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRA3	2556	broad.mit.edu	37	X	151489001	151489001	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRA3	2556	broad.mit.edu	37	X	151495711	151495711	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRA3	2556	broad.mit.edu	37	X	151536591	151536591	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRA3	2556	broad.mit.edu	37	X	151560554	151560554	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRA4	2557	broad.mit.edu	37	4	46941070	46941070	+	Intron	DEL	G	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRA4	2557	broad.mit.edu	37	4	46994950	46994950	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRA6	2559	broad.mit.edu	37	5	161116293	161116293	+	Silent	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRB1	2560	broad.mit.edu	37	4	47150894	47150894	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRB1	2560	broad.mit.edu	37	4	47364305	47364305	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRB2	2561	broad.mit.edu	37	5	160757728	160757728	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRB3	2562	broad.mit.edu	37	15	26828476	26828476	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRB3	2562	broad.mit.edu	37	15	26878539	26878540	+	Intron	DNP	CC	AA	AA			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRB3	2562	broad.mit.edu	37	15	26952899	26952899	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRB3	2562	broad.mit.edu	37	15	26998206	26998206	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRE	2564	broad.mit.edu	37	X	151128296	151128296	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRG3	2567	broad.mit.edu	37	15	27573908	27573908	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRP	2568	broad.mit.edu	37	5	170222221	170222221	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRQ	55879	broad.mit.edu	37	X	151815234	151815234	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAD2	2572	broad.mit.edu	37	10	26513076	26513076	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAGE10	643832	broad.mit.edu	37	X	49173871	49173871	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAK	2580	broad.mit.edu	37	4	859182	859182	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAK	2580	broad.mit.edu	37	4	891903	891903	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALC	2581	broad.mit.edu	37	14	88361205	88361205	+	Intron	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALC	2581	broad.mit.edu	37	14	88421295	88421295	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALC	2581	broad.mit.edu	37	14	88431914	88431914	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT12	79695	broad.mit.edu	37	9	101602509	101602509	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT13	114805	broad.mit.edu	37	2	154769968	154769968	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT13	114805	broad.mit.edu	37	2	154865660	154865660	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT13	114805	broad.mit.edu	37	2	155265518	155265518	+	Missense_Mutation	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT14	79623	broad.mit.edu	37	2	31151389	31151389	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT14	79623	broad.mit.edu	37	2	31160551	31160551	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT14	79623	broad.mit.edu	37	2	31219303	31219303	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT7	51809	broad.mit.edu	37	4	174239522	174239522	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNTL2	117248	broad.mit.edu	37	3	16168502	16168502	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNTL5	168391	broad.mit.edu	37	7	151664474	151664474	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNTL6	442117	broad.mit.edu	37	4	172912767	172912768	+	Intron	DNP	GG	TT	TT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNTL6	442117	broad.mit.edu	37	4	173508883	173508883	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNTL6	442117	broad.mit.edu	37	4	173779581	173779581	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAS2L3	283431	broad.mit.edu	37	12	101018385	101018385	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAS2	2620	broad.mit.edu	37	11	22827408	22827408	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GATA2	2624	broad.mit.edu	37	3	128200720	128200720	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GBA3	57733	broad.mit.edu	37	4	22749369	22749369	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GBP4	115361	broad.mit.edu	37	1	89660907	89660907	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCA	25801	broad.mit.edu	37	2	163210120	163210120	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCKR	2646	broad.mit.edu	37	2	27745528	27745528	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCN1L1	10985	broad.mit.edu	37	12	120569257	120569257	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCN1L1	10985	broad.mit.edu	37	12	120576453	120576453	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GDF5	8200	broad.mit.edu	37	20	34041656	34041656	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GDF6	392255	broad.mit.edu	37	8	97172668	97172668	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GDI1	2664	broad.mit.edu	37	X	153668786	153668786	+	Silent	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GEFT	115557	broad.mit.edu	37	12	58007620	58007620	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GFOD2	81577	broad.mit.edu	37	16	67709752	67709752	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GGNBP2	79893	broad.mit.edu	37	17	34923460	34923460	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GGT5	2687	broad.mit.edu	37	22	24615892	24615892	+	3'UTR	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GHR	2690	broad.mit.edu	37	5	42453771	42453771	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GHR	2690	broad.mit.edu	37	5	42468169	42468169	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GHR	2690	broad.mit.edu	37	5	42653005	42653005	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GIMAP1	170575	broad.mit.edu	37	7	150402905	150402905	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GIMAP4	55303	broad.mit.edu	37	7	150269516	150269516	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GIMAP7	168537	broad.mit.edu	37	7	150210324	150210324	+	5'Flank	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GIPC2	54810	broad.mit.edu	37	1	78548267	78548267	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GIT2	9815	broad.mit.edu	37	12	110390545	110390545	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GJA5	2702	broad.mit.edu	37	1	147236222	147236222	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GK	2710	broad.mit.edu	37	X	30712697	30712697	+	Intron	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLA	2717	broad.mit.edu	37	X	100653084	100653084	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLA	2717	broad.mit.edu	37	X	100662593	100662593	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLB1L3	112937	broad.mit.edu	37	11	134147136	134147136	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLDC	2731	broad.mit.edu	37	9	6540209	6540209	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLDC	2731	broad.mit.edu	37	9	6589358	6589358	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLI1	2735	broad.mit.edu	37	12	57865110	57865110	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLI3	2737	broad.mit.edu	37	7	42152997	42152997	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLI3	2737	broad.mit.edu	37	7	42153644	42153644	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLIPR2	152007	broad.mit.edu	37	9	36147842	36147842	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLO1	2739	broad.mit.edu	37	6	38653291	38653291	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLP1R	2740	broad.mit.edu	37	6	39053332	39053332	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLRA2	2742	broad.mit.edu	37	X	14550390	14550390	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLRA2	2742	broad.mit.edu	37	X	14599492	14599492	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLRA4	441509	broad.mit.edu	37	X	102967358	102967358	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLRB	2743	broad.mit.edu	37	4	157999241	157999241	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLS2	27165	broad.mit.edu	37	12	56873058	56873058	+	Intron	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLYATL2	219970	broad.mit.edu	37	11	58606969	58606969	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLYATL2	219970	broad.mit.edu	37	11	58607111	58607111	+	5'UTR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GMPPA	29926	broad.mit.edu	37	2	220368606	220368606	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GMPPA	29926	broad.mit.edu	37	2	220369570	220369570	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GMPPA	29926	broad.mit.edu	37	2	220369661	220369661	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNG2	54331	broad.mit.edu	37	14	52433536	52433536	+	3'UTR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNG4	2786	broad.mit.edu	37	1	235747056	235747056	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNGT1	2792	broad.mit.edu	37	7	93350058	93350058	+	Intron	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLGA4	2803	broad.mit.edu	37	3	37379195	37379195	+	Silent	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLIM4	27333	broad.mit.edu	37	3	167728496	167728496	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GP6	51206	broad.mit.edu	37	19	55539168	55539168	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPATCH8	23131	broad.mit.edu	37	17	42513779	42513779	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPBP1	65056	broad.mit.edu	37	5	56558438	56558438	+	Silent	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPC3	2719	broad.mit.edu	37	X	133033483	133033483	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPC4	2239	broad.mit.edu	37	X	132438657	132438657	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPC5	2262	broad.mit.edu	37	13	92182498	92182498	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPC5	2262	broad.mit.edu	37	13	93518776	93518776	+	3'UTR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPC6	10082	broad.mit.edu	37	13	94186390	94186390	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPC6	10082	broad.mit.edu	37	13	94726955	94726955	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPD1	2819	broad.mit.edu	37	12	50497855	50497855	+	Missense_Mutation	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPHB5	122876	broad.mit.edu	37	14	63779701	63779701	+	3'UTR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPHB5	122876	broad.mit.edu	37	14	63784348	63784348	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPHN	10243	broad.mit.edu	37	14	67510285	67510285	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPIHBP1	338328	broad.mit.edu	37	8	144297147	144297147	+	Silent	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR101	83550	broad.mit.edu	37	X	136112889	136112889	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR101	83550	broad.mit.edu	37	X	136113762	136113762	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR112	139378	broad.mit.edu	37	X	135428176	135428176	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR112	139378	broad.mit.edu	37	X	135431852	135431852	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR112	139378	broad.mit.edu	37	X	135439691	135439691	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR112	139378	broad.mit.edu	37	X	135482021	135482021	+	Missense_Mutation	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR113	165082	broad.mit.edu	37	2	26534166	26534166	+	Silent	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR123	84435	broad.mit.edu	37	10	134898421	134898421	+	5'Flank	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR125	166647	broad.mit.edu	37	4	22437114	22437114	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR125	166647	broad.mit.edu	37	4	22446767	22446767	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR128	84873	broad.mit.edu	37	3	100374654	100374654	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR135	64582	broad.mit.edu	37	14	59897830	59897830	+	Intron	SNP	C	A	A	rs139478085	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR139	124274	broad.mit.edu	37	16	20058629	20058629	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR151	134391	broad.mit.edu	37	5	145895361	145895361	+	Missense_Mutation	SNP	G	T	T	rs147138565	byFrequency	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR153	387509	broad.mit.edu	37	1	6311386	6311386	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR155	151556	broad.mit.edu	37	2	175346449	175346449	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR158	57512	broad.mit.edu	37	10	25509871	25509871	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR158	57512	broad.mit.edu	37	10	25887316	25887316	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR37	2861	broad.mit.edu	37	7	124386587	124386587	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR55	9290	broad.mit.edu	37	2	231774928	231774928	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR64	10149	broad.mit.edu	37	X	19013209	19013209	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR64	10149	broad.mit.edu	37	X	19028654	19028654	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR64	10149	broad.mit.edu	37	X	19063151	19063151	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR85	54329	broad.mit.edu	37	7	112724206	112724206	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRAP2	9402	broad.mit.edu	37	22	40335221	40335221	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRAP2	9402	broad.mit.edu	37	22	40364155	40364155	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GREB1	9687	broad.mit.edu	37	2	11706502	11706502	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRHL1	29841	broad.mit.edu	37	2	10130810	10130810	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRHL3	57822	broad.mit.edu	37	1	24666013	24666013	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIA1	2890	broad.mit.edu	37	5	153108416	153108416	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIA2	2891	broad.mit.edu	37	4	158233871	158233871	+	Silent	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIA2	2891	broad.mit.edu	37	4	158282448	158282449	+	Intron	DNP	CC	AA	AA			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIA2	2891	broad.mit.edu	37	4	158284152	158284152	+	Nonsense_Mutation	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIA3	2892	broad.mit.edu	37	X	122492631	122492631	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIA3	2892	broad.mit.edu	37	X	122537000	122537000	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIA3	2892	broad.mit.edu	37	X	122616707	122616707	+	Missense_Mutation	SNP	G	C	C	rs137852350		TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIA4	2893	broad.mit.edu	37	11	105774684	105774684	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIA4	2893	broad.mit.edu	37	11	105836800	105836800	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRID1	2894	broad.mit.edu	37	10	87501397	87501397	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRID1	2894	broad.mit.edu	37	10	87648464	87648464	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRID1	2894	broad.mit.edu	37	10	87845158	87845158	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRID1	2894	broad.mit.edu	37	10	87848266	87848266	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRID1	2894	broad.mit.edu	37	10	87851596	87851596	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRID2	2895	broad.mit.edu	37	4	93511345	93511345	+	Missense_Mutation	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRID2	2895	broad.mit.edu	37	4	94137749	94137749	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRID2	2895	broad.mit.edu	37	4	94247340	94247340	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRID2	2895	broad.mit.edu	37	4	94446451	94446451	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRID2	2895	broad.mit.edu	37	4	94615369	94615369	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIK2	2898	broad.mit.edu	37	6	102276435	102276435	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIK2	2898	broad.mit.edu	37	6	102372530	102372530	+	Silent	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIK3	2899	broad.mit.edu	37	1	37298808	37298808	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIK3	2899	broad.mit.edu	37	1	37397792	37397792	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIK4	2900	broad.mit.edu	37	11	120429025	120429025	+	Intron	SNP	G	T	T	rs149519937	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIK4	2900	broad.mit.edu	37	11	120541279	120541279	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIN2B	2904	broad.mit.edu	37	12	13792235	13792235	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIN2B	2904	broad.mit.edu	37	12	13913000	13913000	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIN2B	2904	broad.mit.edu	37	12	14013684	14013684	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIN3A	116443	broad.mit.edu	37	9	104385544	104385544	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIN3A	116443	broad.mit.edu	37	9	104498106	104498106	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIPAP1	56850	broad.mit.edu	37	X	48837590	48837590	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRK5	2869	broad.mit.edu	37	10	121212278	121212278	+	Silent	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM2	2912	broad.mit.edu	37	3	51750113	51750113	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM3	2913	broad.mit.edu	37	7	86442866	86442866	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM5	2915	broad.mit.edu	37	11	88319767	88319767	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM5	2915	broad.mit.edu	37	11	88650989	88650989	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM7	2917	broad.mit.edu	37	3	7611034	7611034	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM8	2918	broad.mit.edu	37	7	126542658	126542658	+	Missense_Mutation	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM8	2918	broad.mit.edu	37	7	126547132	126547132	+	Intron	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM8	2918	broad.mit.edu	37	7	126645621	126645621	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM8	2918	broad.mit.edu	37	7	126793323	126793323	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSG1	83445	broad.mit.edu	37	12	13238120	13238120	+	Silent	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSTA2	2939	broad.mit.edu	37	6	52616602	52616602	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSTA3	2940	broad.mit.edu	37	6	52764717	52764717	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSTA4	2941	broad.mit.edu	37	6	52858910	52858910	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF3C5	9328	broad.mit.edu	37	9	135933286	135933286	+	Silent	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTSE1	51512	broad.mit.edu	37	22	46724473	46724473	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUCA1B	2979	broad.mit.edu	37	6	42165653	42165653	+	5'Flank	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUCA1C	9626	broad.mit.edu	37	3	108627009	108627009	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUSBP1	728411	broad.mit.edu	37	5	21344687	21344687	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUSBP1	728411	broad.mit.edu	37	5	21382902	21382902	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GYG2	8908	broad.mit.edu	37	X	2748287	2748287	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GYPA	2993	broad.mit.edu	37	4	144961218	144961218	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GYS1	2997	broad.mit.edu	37	19	49477529	49477529	+	Missense_Mutation	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HACE1	57531	broad.mit.edu	37	6	105219187	105219187	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HADH	3033	broad.mit.edu	37	4	108955412	108955412	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAUS7	55559	broad.mit.edu	37	X	152734594	152734594	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HBE1	3046	broad.mit.edu	37	11	5291160	5291160	+	5'UTR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HBEGF	1839	broad.mit.edu	37	5	139715731	139715731	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HCN1	348980	broad.mit.edu	37	5	45262060	45262060	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HCN1	348980	broad.mit.edu	37	5	45307301	45307301	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HCN1	348980	broad.mit.edu	37	5	45312810	45312810	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HCN1	348980	broad.mit.edu	37	5	45353852	45353852	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HCN1	348980	broad.mit.edu	37	5	45386401	45386401	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HCN1	348980	broad.mit.edu	37	5	45497392	45497392	+	Intron	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HCN1	348980	broad.mit.edu	37	5	45498183	45498183	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC7	51564	broad.mit.edu	37	12	48183457	48183457	+	Intron	SNP	G	C	C	rs150262999	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC8	55869	broad.mit.edu	37	X	71766411	71766411	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC9	9734	broad.mit.edu	37	7	18467246	18467246	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC9	9734	broad.mit.edu	37	7	18684300	18684300	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC9	9734	broad.mit.edu	37	7	18814394	18814394	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC9	9734	broad.mit.edu	37	7	18904921	18904921	+	Intron	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDX	139324	broad.mit.edu	37	X	83695397	83695397	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR1	55127	broad.mit.edu	37	1	236720721	236720721	+	Intron	DEL	A	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR4	399671	broad.mit.edu	37	14	73965078	73965078	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR7B2	133558	broad.mit.edu	37	5	40999795	40999795	+	Silent	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR7B2	133558	broad.mit.edu	37	5	41012911	41012911	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR7B2	133558	broad.mit.edu	37	5	41019047	41019047	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR7B2	133558	broad.mit.edu	37	5	41055873	41055873	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HECW2	57520	broad.mit.edu	37	2	197081766	197081766	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HECW2	57520	broad.mit.edu	37	2	197081909	197081909	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HECW2	57520	broad.mit.edu	37	2	197297730	197297730	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEG1	57493	broad.mit.edu	37	3	124739622	124739622	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HELZ	9931	broad.mit.edu	37	17	65163943	65163943	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEPHL1	341208	broad.mit.edu	37	11	93806601	93806601	+	Silent	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEPHL1	341208	broad.mit.edu	37	11	93837944	93837944	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEPH	9843	broad.mit.edu	37	X	65393450	65393450	+	Silent	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEPH	9843	broad.mit.edu	37	X	65420572	65420572	+	Silent	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC2	8924	broad.mit.edu	37	15	28408160	28408160	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC2	8924	broad.mit.edu	37	15	28441170	28441170	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC2	8924	broad.mit.edu	37	15	28458898	28458898	+	Missense_Mutation	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC3	8916	broad.mit.edu	37	4	89576324	89576324	+	Splice_Site	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC3	8916	broad.mit.edu	37	4	89576460	89576461	+	Intron	DEL	GT	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC4	26091	broad.mit.edu	37	10	69748293	69748293	+	Intron	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HES1	3280	broad.mit.edu	37	3	193854616	193854616	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HGD	3081	broad.mit.edu	37	3	120388389	120388389	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HGF	3082	broad.mit.edu	37	7	81332038	81332038	+	Silent	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HGF	3082	broad.mit.edu	37	7	81346623	81346623	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HGF	3082	broad.mit.edu	37	7	81350207	81350207	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HGF	3082	broad.mit.edu	37	7	81366693	81366693	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HGF	3082	broad.mit.edu	37	7	81386722	81386722	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HGF	3082	broad.mit.edu	37	7	81388036	81388036	+	Silent	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HHLA1	10086	broad.mit.edu	37	8	133086152	133086152	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HHLA2	11148	broad.mit.edu	37	3	108096082	108096082	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIBCH	26275	broad.mit.edu	37	2	191105885	191105885	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIF1A	3091	broad.mit.edu	37	14	62188849	62188849	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIP1	3092	broad.mit.edu	37	7	75191316	75191316	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIPK1	204851	broad.mit.edu	37	1	114505838	114505838	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIPK2	28996	broad.mit.edu	37	7	139281713	139281713	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H1C	3006	broad.mit.edu	37	6	26056240	26056240	+	Silent	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H3C	8352	broad.mit.edu	37	6	26045641	26045641	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H3C	8352	broad.mit.edu	37	6	26045849	26045849	+	Silent	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H4C	8364	broad.mit.edu	37	6	26104361	26104361	+	Silent	SNP	C	T	T	rs141888021		TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H4H	8365	broad.mit.edu	37	6	26282796	26282796	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H4L	8368	broad.mit.edu	37	6	27841084	27841084	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST2H2AC	8338	broad.mit.edu	37	1	149858235	149858235	+	5'Flank	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST2H2AC	8338	broad.mit.edu	37	1	149858524	149858524	+	5'Flank	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST2H2BA	337875	broad.mit.edu	37	1	120904659	120904659	+	5'Flank	SNP	G	A	A	rs145940435	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIVEP3	59269	broad.mit.edu	37	1	42302739	42302739	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HK1	3098	broad.mit.edu	37	10	71129170	71129170	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HK2	3099	broad.mit.edu	37	2	75094966	75094967	+	Intron	DEL	TC	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HKDC1	80201	broad.mit.edu	37	10	70987150	70987150	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HLA-DPB1	3115	broad.mit.edu	37	6	33063857	33063857	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HLA-DPB1	3115	broad.mit.edu	37	6	33075302	33075302	+	Intron	DEL	C	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HLTF	6596	broad.mit.edu	37	3	148777616	148777616	+	Intron	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMCN1	83872	broad.mit.edu	37	1	185749698	185749698	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMCN1	83872	broad.mit.edu	37	1	185813031	185813031	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMCN1	83872	broad.mit.edu	37	1	186086677	186086677	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMCN1	83872	broad.mit.edu	37	1	186120569	186120569	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMGA2	8091	broad.mit.edu	37	12	66311521	66311521	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMP19	51617	broad.mit.edu	37	5	173500690	173500690	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMP19	51617	broad.mit.edu	37	5	173502654	173502654	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMP19	51617	broad.mit.edu	37	5	173531369	173531369	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNF1B	6928	broad.mit.edu	37	17	36104797	36104797	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNF4A	3172	broad.mit.edu	37	20	43031278	43031278	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOMER2	9455	broad.mit.edu	37	15	83550450	83550450	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOOK1	51361	broad.mit.edu	37	1	60328496	60328496	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOPX	84525	broad.mit.edu	37	4	57546605	57546606	+	Intron	DNP	TG	GT	GT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXB3	3213	broad.mit.edu	37	17	46636873	46636873	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXB3	3213	broad.mit.edu	37	17	46640799	46640799	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXC4	3221	broad.mit.edu	37	12	54448886	54448886	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXC8	3224	broad.mit.edu	37	12	54401821	54401821	+	5'Flank	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXC8	3224	broad.mit.edu	37	12	54405529	54405529	+	3'UTR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXD11	3237	broad.mit.edu	37	2	176972320	176972320	+	Silent	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXD12	3238	broad.mit.edu	37	2	176965452	176965452	+	Silent	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HPCA	3208	broad.mit.edu	37	1	33354567	33354567	+	Nonsense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HPRT1	3251	broad.mit.edu	37	X	133627709	133627709	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HPS1	3257	broad.mit.edu	37	10	100182429	100182429	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HPSE2	60495	broad.mit.edu	37	10	100471829	100471829	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HPSE2	60495	broad.mit.edu	37	10	100531301	100531301	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HPX	3263	broad.mit.edu	37	11	6462289	6462289	+	5'Flank	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRNR	388697	broad.mit.edu	37	1	152191421	152191421	+	Missense_Mutation	SNP	T	A	A	rs138393626		TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HS3ST4	9951	broad.mit.edu	37	16	25838358	25838358	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HS3ST4	9951	broad.mit.edu	37	16	25879681	25879681	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HS3ST4	9951	broad.mit.edu	37	16	26139028	26139028	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HS3ST5	222537	broad.mit.edu	37	6	114470771	114470771	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HS6ST3	266722	broad.mit.edu	37	13	96796082	96796082	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HS6ST3	266722	broad.mit.edu	37	13	96886935	96886935	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSD11B1	3290	broad.mit.edu	37	1	209873307	209873307	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSD17B7P2	158160	broad.mit.edu	37	10	38654562	38654562	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSFX2	100130086	broad.mit.edu	37	X	148802185	148802185	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSFX2	100130086	broad.mit.edu	37	X	148839961	148839961	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSH2D	84941	broad.mit.edu	37	19	16268408	16268408	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSP90AB2P	391634	broad.mit.edu	37	4	13339187	13339187	+	RNA	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPA4L	22824	broad.mit.edu	37	4	128751910	128751910	+	Nonsense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR2C	3358	broad.mit.edu	37	X	114141570	114141570	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR3B	9177	broad.mit.edu	37	11	113802090	113802090	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR7	3363	broad.mit.edu	37	10	92502209	92502209	+	3'UTR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR7	3363	broad.mit.edu	37	10	92523259	92523259	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HUNK	30811	broad.mit.edu	37	21	33326481	33326481	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HUWE1	10075	broad.mit.edu	37	X	53563456	53563456	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HUWE1	10075	broad.mit.edu	37	X	53589944	53589944	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HVCN1	84329	broad.mit.edu	37	12	111088062	111088062	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HYDIN	54768	broad.mit.edu	37	16	70905949	70905949	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HYDIN	54768	broad.mit.edu	37	16	70943854	70943854	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IARS	3376	broad.mit.edu	37	9	94973092	94973092	+	Silent	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ICA1	3382	broad.mit.edu	37	7	8253093	8253093	+	Intron	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ICAM3	3385	broad.mit.edu	37	19	10444650	10444650	+	Silent	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFI16	3428	broad.mit.edu	37	1	159023359	159023359	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFI44L	10964	broad.mit.edu	37	1	79107493	79107493	+	Nonstop_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFLTD1	160492	broad.mit.edu	37	12	25672099	25672099	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFNA17	3451	broad.mit.edu	37	9	21227742	21227742	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFT122	55764	broad.mit.edu	37	3	129200819	129200819	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGBP1	3476	broad.mit.edu	37	X	69353825	69353825	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGF1R	3480	broad.mit.edu	37	15	99288381	99288381	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGF1	3479	broad.mit.edu	37	12	102813207	102813207	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGF2BP2	10644	broad.mit.edu	37	3	185404893	185404893	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGFBP2	3485	broad.mit.edu	37	2	217526667	217526667	+	Silent	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGFBP3	3486	broad.mit.edu	37	7	45956787	45956787	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGFBP5	3488	broad.mit.edu	37	2	217542840	217542840	+	Missense_Mutation	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGHMBP2	3508	broad.mit.edu	37	11	68704073	68704073	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF10	285313	broad.mit.edu	37	3	151162651	151162651	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF1	3547	broad.mit.edu	37	X	130413340	130413340	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF1	3547	broad.mit.edu	37	X	130455814	130455814	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF1	3547	broad.mit.edu	37	X	130532153	130532153	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF21	84966	broad.mit.edu	37	1	18525382	18525382	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF21	84966	broad.mit.edu	37	1	18564065	18564065	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF21	84966	broad.mit.edu	37	1	18632403	18632403	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF22	283284	broad.mit.edu	37	11	18732226	18732226	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IKZF2	22807	broad.mit.edu	37	2	213872288	213872288	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL13RA1	3597	broad.mit.edu	37	X	117883868	117883868	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL15	3600	broad.mit.edu	37	4	142640524	142640524	+	5'UTR	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL18RAP	8807	broad.mit.edu	37	2	103040329	103040329	+	Silent	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1F8	27177	broad.mit.edu	37	2	113786647	113786647	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1F8	27177	broad.mit.edu	37	2	113788844	113788844	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1R1	3554	broad.mit.edu	37	2	102794103	102794103	+	3'UTR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1RAPL1	11141	broad.mit.edu	37	X	28658310	28658310	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1RAPL1	11141	broad.mit.edu	37	X	29417485	29417485	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1RAPL2	26280	broad.mit.edu	37	X	103882481	103882481	+	Intron	SNP	G	C	C	rs58410384		TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1RAPL2	26280	broad.mit.edu	37	X	104026759	104026759	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1RAPL2	26280	broad.mit.edu	37	X	104274650	104274650	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1RAPL2	26280	broad.mit.edu	37	X	104478349	104478349	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1RAPL2	26280	broad.mit.edu	37	X	104512090	104512090	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1RAPL2	26280	broad.mit.edu	37	X	104651436	104651436	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1RAPL2	26280	broad.mit.edu	37	X	104761919	104761919	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1RAPL2	26280	broad.mit.edu	37	X	104761938	104761938	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1RAPL2	26280	broad.mit.edu	37	X	104772715	104772715	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1RAPL2	26280	broad.mit.edu	37	X	104857248	104857248	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1RAPL2	26280	broad.mit.edu	37	X	104893989	104893989	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1RAPL2	26280	broad.mit.edu	37	X	104950038	104950038	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1RAP	3556	broad.mit.edu	37	3	190251173	190251173	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1RL1	9173	broad.mit.edu	37	2	102957235	102957235	+	Missense_Mutation	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL2RG	3561	broad.mit.edu	37	X	70327594	70327594	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL31RA	133396	broad.mit.edu	37	5	55159378	55159378	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL8	3576	broad.mit.edu	37	4	74670284	74670284	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL9R	3581	broad.mit.edu	37	X	155232744	155232744	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IMMP2L	83943	broad.mit.edu	37	7	110555310	110555310	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IMMP2L	83943	broad.mit.edu	37	7	110903735	110903735	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IMPDH1	3614	broad.mit.edu	37	7	128049523	128049523	+	Silent	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INHBA	3624	broad.mit.edu	37	7	41729893	41729893	+	Missense_Mutation	SNP	G	T	T	rs149369067		TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INHBA	3624	broad.mit.edu	37	7	41735819	41735819	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INO80E	283899	broad.mit.edu	37	16	30016795	30016795	+	3'UTR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INPP4B	8821	broad.mit.edu	37	4	142990443	142990443	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INPP4B	8821	broad.mit.edu	37	4	143008482	143008482	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INPP4B	8821	broad.mit.edu	37	4	143066850	143066850	+	Intron	SNP	C	A	A	rs148393438	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INPP4B	8821	broad.mit.edu	37	4	143709964	143709964	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INPP5D	3635	broad.mit.edu	37	2	234076243	234076243	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INSIG2	51141	broad.mit.edu	37	2	118859664	118859664	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INSIG2	51141	broad.mit.edu	37	2	118861025	118861025	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INSR	3643	broad.mit.edu	37	19	7132341	7132341	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INTS3	65123	broad.mit.edu	37	1	153723552	153723552	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INTS8	55656	broad.mit.edu	37	8	95839416	95839416	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IP6K1	9807	broad.mit.edu	37	3	49765502	49765502	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQCA1	79781	broad.mit.edu	37	2	237317566	237317566	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQCF1	132141	broad.mit.edu	37	3	51884122	51884122	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQGAP2	10788	broad.mit.edu	37	5	75932745	75932745	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQGAP2	10788	broad.mit.edu	37	5	75973188	75973188	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQGAP3	128239	broad.mit.edu	37	1	156501197	156501197	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQGAP3	128239	broad.mit.edu	37	1	156513047	156513047	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQGAP3	128239	broad.mit.edu	37	1	156533301	156533301	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQSEC3	440073	broad.mit.edu	37	12	280207	280207	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRAK1	3654	broad.mit.edu	37	X	153284805	153284805	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRS4	8471	broad.mit.edu	37	X	107976646	107976646	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ISLR2	57611	broad.mit.edu	37	15	74424811	74424811	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ISPD	729920	broad.mit.edu	37	7	16158684	16158684	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ISX	91464	broad.mit.edu	37	22	35463223	35463223	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA10	8515	broad.mit.edu	37	1	145534113	145534113	+	Nonsense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA10	8515	broad.mit.edu	37	1	145534244	145534244	+	Silent	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA10	8515	broad.mit.edu	37	1	145538813	145538813	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA11	22801	broad.mit.edu	37	15	68698723	68698723	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA1	3672	broad.mit.edu	37	5	52201708	52201708	+	Silent	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA4	3676	broad.mit.edu	37	2	182340550	182340550	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA4	3676	broad.mit.edu	37	2	182350603	182350603	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA4	3676	broad.mit.edu	37	2	182390082	182390082	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA7	3679	broad.mit.edu	37	12	56082567	56082567	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAD	3681	broad.mit.edu	37	16	31419751	31419751	+	Nonsense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAX	3687	broad.mit.edu	37	16	31374272	31374272	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAX	3687	broad.mit.edu	37	16	31384824	31384824	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGB1BP2	26548	broad.mit.edu	37	X	70521702	70521702	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGB1BP2	26548	broad.mit.edu	37	X	70524766	70524766	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGB7	3695	broad.mit.edu	37	12	53589337	53589337	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGB8	3696	broad.mit.edu	37	7	20420461	20420461	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGB8	3696	broad.mit.edu	37	7	20431151	20431151	+	Intron	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGB8	3696	broad.mit.edu	37	7	20438417	20438417	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITIH5L	347365	broad.mit.edu	37	X	54781460	54781460	+	Silent	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITIH5L	347365	broad.mit.edu	37	X	54819311	54819311	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITIH5	80760	broad.mit.edu	37	10	7619007	7619007	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITPKB	3707	broad.mit.edu	37	1	226923986	226923986	+	Missense_Mutation	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITPR1	3708	broad.mit.edu	37	3	4856882	4856882	+	Missense_Mutation	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITPR2	3709	broad.mit.edu	37	12	26664285	26664285	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITPR2	3709	broad.mit.edu	37	12	26797215	26797215	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITPR3	3710	broad.mit.edu	37	6	33653826	33653826	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITSN2	50618	broad.mit.edu	37	2	24557614	24557614	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IVD	3712	broad.mit.edu	37	15	40702824	40702824	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IVL	3713	broad.mit.edu	37	1	152883773	152883773	+	Silent	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JAK1	3716	broad.mit.edu	37	1	65323511	65323511	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JAKMIP1	152789	broad.mit.edu	37	4	6042553	6042553	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JUP	3728	broad.mit.edu	37	17	39703623	39703623	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KALRN	8997	broad.mit.edu	37	3	123834414	123834414	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KALRN	8997	broad.mit.edu	37	3	123938365	123938365	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KALRN	8997	broad.mit.edu	37	3	123962561	123962561	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KALRN	8997	broad.mit.edu	37	3	123978854	123978854	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KALRN	8997	broad.mit.edu	37	3	124046705	124046705	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KALRN	8997	broad.mit.edu	37	3	124197279	124197279	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KANK4	163782	broad.mit.edu	37	1	62747122	62747122	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KANK4	163782	broad.mit.edu	37	1	62756859	62756859	+	Intron	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KATNAL2	83473	broad.mit.edu	37	18	44595747	44595747	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCMF1	56888	broad.mit.edu	37	2	85262310	85262310	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNA5	3741	broad.mit.edu	37	12	5154729	5154729	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNA5	3741	broad.mit.edu	37	12	5154951	5154951	+	Silent	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNA6	3742	broad.mit.edu	37	12	4920249	4920249	+	Silent	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNAB2	8514	broad.mit.edu	37	1	6145212	6145212	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNB1	3745	broad.mit.edu	37	20	47990218	47990218	+	Silent	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNB1	3745	broad.mit.edu	37	20	48098460	48098460	+	Silent	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNB2	9312	broad.mit.edu	37	8	73817044	73817044	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNB2	9312	broad.mit.edu	37	8	73849145	73849145	+	Missense_Mutation	SNP	G	A	A	rs149424569		TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCND2	3751	broad.mit.edu	37	7	120006391	120006391	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCND2	3751	broad.mit.edu	37	7	120377223	120377223	+	Intron	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCND3	3752	broad.mit.edu	37	1	112436570	112436570	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH1	3756	broad.mit.edu	37	1	210957203	210957203	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH1	3756	broad.mit.edu	37	1	210995517	210995517	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH1	3756	broad.mit.edu	37	1	211171344	211171344	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH2	3757	broad.mit.edu	37	7	150646204	150646204	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH5	27133	broad.mit.edu	37	14	63226118	63226118	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH5	27133	broad.mit.edu	37	14	63229080	63229080	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH6	81033	broad.mit.edu	37	17	61600905	61600906	+	Intron	INS	-	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH6	81033	broad.mit.edu	37	17	61611231	61611231	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH7	90134	broad.mit.edu	37	2	163253232	163253232	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH7	90134	broad.mit.edu	37	2	163257147	163257147	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH7	90134	broad.mit.edu	37	2	163309490	163309490	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH8	131096	broad.mit.edu	37	3	19432258	19432258	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNIP1	30820	broad.mit.edu	37	5	169931701	169931701	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNIP1	30820	broad.mit.edu	37	5	170034147	170034148	+	Intron	DNP	CT	TG	TG			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNIP1	30820	broad.mit.edu	37	5	170103270	170103270	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNIP4	80333	broad.mit.edu	37	4	20783570	20783570	+	Intron	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNIP4	80333	broad.mit.edu	37	4	20870958	20870958	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNIP4	80333	broad.mit.edu	37	4	21014941	21014941	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNIP4	80333	broad.mit.edu	37	4	21263434	21263434	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNJ16	3773	broad.mit.edu	37	17	68128552	68128552	+	Silent	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNJ16	3773	broad.mit.edu	37	17	68128672	68128672	+	Silent	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNJ16	3773	broad.mit.edu	37	17	68128681	68128681	+	Silent	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNJ16	3773	broad.mit.edu	37	17	68128951	68128951	+	Silent	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNJ2	3759	broad.mit.edu	37	17	68171771	68171771	+	Silent	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNJ2	3759	broad.mit.edu	37	17	68172162	68172162	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNJ3	3760	broad.mit.edu	37	2	155711443	155711443	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNJ6	3763	broad.mit.edu	37	21	39010031	39010031	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNJ8	3764	broad.mit.edu	37	12	21919617	21919617	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNK16	83795	broad.mit.edu	37	6	39282624	39282624	+	3'UTR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNK17	89822	broad.mit.edu	37	6	39267319	39267319	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNK2	3776	broad.mit.edu	37	1	215328003	215328003	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNK2	3776	broad.mit.edu	37	1	215332512	215332512	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNK2	3776	broad.mit.edu	37	1	215368434	215368434	+	Missense_Mutation	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNK9	51305	broad.mit.edu	37	8	140631448	140631448	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNMA1	3778	broad.mit.edu	37	10	79271157	79271157	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNMB2	10242	broad.mit.edu	37	3	178384707	178384708	+	Intron	DNP	CC	AA	AA			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNMB2	10242	broad.mit.edu	37	3	178386965	178386965	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNMB2	10242	broad.mit.edu	37	3	178388810	178388810	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNMB3	27094	broad.mit.edu	37	3	178976721	178976721	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNQ4	9132	broad.mit.edu	37	1	41283727	41283727	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNQ5	56479	broad.mit.edu	37	6	73759980	73759980	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNT2	343450	broad.mit.edu	37	1	196531189	196531189	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNU1	157855	broad.mit.edu	37	8	36664779	36664779	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCTD16	57528	broad.mit.edu	37	5	143818765	143818765	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCTD20	222658	broad.mit.edu	37	6	36449479	36449479	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCTD3	51133	broad.mit.edu	37	1	215751388	215751388	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDELC1	79070	broad.mit.edu	37	13	103441633	103441633	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM4C	23081	broad.mit.edu	37	9	7094491	7094491	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDR	3791	broad.mit.edu	37	4	55961048	55961048	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KEL	3792	broad.mit.edu	37	7	142639318	142639318	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KEL	3792	broad.mit.edu	37	7	142658566	142658566	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KHDRBS2	202559	broad.mit.edu	37	6	62770196	62770196	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KHK	3795	broad.mit.edu	37	2	27315015	27315015	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0141	9812	broad.mit.edu	37	5	141309689	141309689	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0174	9798	broad.mit.edu	37	16	71950431	71950431	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0174	9798	broad.mit.edu	37	16	71961473	71961473	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0226	9711	broad.mit.edu	37	3	197422649	197422650	+	Intron	INS	-	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0427	9811	broad.mit.edu	37	18	46263281	46263281	+	Intron	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0427	9811	broad.mit.edu	37	18	46284078	46284078	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0467	23334	broad.mit.edu	37	1	43908875	43908875	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0586	9786	broad.mit.edu	37	14	58956902	58956902	+	Missense_Mutation	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0947	23379	broad.mit.edu	37	5	5457980	5457980	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1009	22832	broad.mit.edu	37	6	84859507	84859507	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1045	23349	broad.mit.edu	37	9	34961296	34961296	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1210	57481	broad.mit.edu	37	X	118220333	118220333	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1217	56243	broad.mit.edu	37	10	24375161	24375161	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1239	57495	broad.mit.edu	37	4	37440661	37440661	+	Silent	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1267	284058	broad.mit.edu	37	17	44127983	44127983	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1324L	222223	broad.mit.edu	37	7	86509994	86509994	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1409	57578	broad.mit.edu	37	14	93877560	93877560	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1409	57578	broad.mit.edu	37	14	94007143	94007143	+	Missense_Mutation	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1409	57578	broad.mit.edu	37	14	94079504	94079504	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1432	57589	broad.mit.edu	37	9	5656667	5656667	+	5'UTR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1524	57650	broad.mit.edu	37	3	108284111	108284111	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1549	57670	broad.mit.edu	37	7	138620437	138620437	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1632	57724	broad.mit.edu	37	18	43464725	43464725	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1632	57724	broad.mit.edu	37	18	43535185	43535185	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1644	85352	broad.mit.edu	37	22	44676667	44676667	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1755	85449	broad.mit.edu	37	20	36846687	36846687	+	Missense_Mutation	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1804	84451	broad.mit.edu	37	1	233489729	233489729	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA2018	205717	broad.mit.edu	37	3	113374495	113374495	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA2022	340533	broad.mit.edu	37	X	73964218	73964218	+	Silent	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA2022	340533	broad.mit.edu	37	X	73971599	73971599	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA2022	340533	broad.mit.edu	37	X	74137420	74137420	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA2026	158358	broad.mit.edu	37	9	5922999	5922999	+	Silent	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF13B	23303	broad.mit.edu	37	8	29006279	29006279	+	Missense_Mutation	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF14	9928	broad.mit.edu	37	1	200522786	200522786	+	Silent	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF16B	55614	broad.mit.edu	37	20	16253910	16253910	+	Silent	SNP	G	A	A	rs75213889		TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF21A	55605	broad.mit.edu	37	12	39756766	39756766	+	Intron	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF21B	23046	broad.mit.edu	37	1	200952025	200952025	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF21B	23046	broad.mit.edu	37	1	200993783	200993783	+	5'Flank	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF24	347240	broad.mit.edu	37	9	34255866	34255866	+	Missense_Mutation	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF27	55582	broad.mit.edu	37	9	86495428	86495428	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF27	55582	broad.mit.edu	37	9	86518256	86518256	+	Missense_Mutation	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF2B	84643	broad.mit.edu	37	17	51901441	51901441	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF5A	3798	broad.mit.edu	37	12	57974740	57974740	+	Missense_Mutation	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF5C	3800	broad.mit.edu	37	2	149639279	149639280	+	Intron	DNP	TC	AA	AA			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF6	221458	broad.mit.edu	37	6	39328383	39328383	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF6	221458	broad.mit.edu	37	6	39411980	39411980	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF6	221458	broad.mit.edu	37	6	39507899	39507899	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF7	374654	broad.mit.edu	37	15	90188559	90188559	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIFC1	3833	broad.mit.edu	37	6	33372728	33372728	+	Silent	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIN	22944	broad.mit.edu	37	10	7821017	7821017	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIR3DL1	3811	broad.mit.edu	37	19	55361985	55361985	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIR3DL1	3811	broad.mit.edu	37	19	55362008	55362008	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIRREL2	84063	broad.mit.edu	37	19	36355656	36355656	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIRREL3	84623	broad.mit.edu	37	11	126597778	126597778	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIRREL3	84623	broad.mit.edu	37	11	126615968	126615968	+	Intron	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIRREL	55243	broad.mit.edu	37	1	158024972	158024972	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIRREL	55243	broad.mit.edu	37	1	158026814	158026814	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIT	3815	broad.mit.edu	37	4	55564642	55564642	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIT	3815	broad.mit.edu	37	4	55570038	55570038	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLB	152831	broad.mit.edu	37	4	39448730	39448730	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLF12	11278	broad.mit.edu	37	13	74479514	74479514	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLF15	28999	broad.mit.edu	37	3	126062786	126062786	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL1	57626	broad.mit.edu	37	13	70456660	70456660	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL22	84861	broad.mit.edu	37	22	20805834	20805834	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL34	257240	broad.mit.edu	37	X	21674276	21674276	+	Missense_Mutation	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL34	257240	broad.mit.edu	37	X	21675988	21675989	+	5'UTR	DNP	GG	TT	TT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLKP1	606293	broad.mit.edu	37	19	51397156	51397156	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KMO	8564	broad.mit.edu	37	1	241725606	241725606	+	Missense_Mutation	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KNDC1	85442	broad.mit.edu	37	10	135020334	135020334	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KNTC1	9735	broad.mit.edu	37	12	123042196	123042196	+	Missense_Mutation	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KNTC1	9735	broad.mit.edu	37	12	123082387	123082387	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRAS	3845	broad.mit.edu	37	12	25398285	25398285	+	Missense_Mutation	SNP	C	A	A	rs121913530		TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT12	3859	broad.mit.edu	37	17	39022437	39022437	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT1	3848	broad.mit.edu	37	12	53068775	53068775	+	3'UTR	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT31	3881	broad.mit.edu	37	17	39551497	39551497	+	Silent	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT32	3882	broad.mit.edu	37	17	39616154	39616154	+	3'UTR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT3	3850	broad.mit.edu	37	12	53185454	53185454	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT4	3851	broad.mit.edu	37	12	53204583	53204583	+	Missense_Mutation	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT5	3852	broad.mit.edu	37	12	52908971	52908971	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT5	3852	broad.mit.edu	37	12	52911837	52911837	+	Intron	DEL	G	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT6B	3854	broad.mit.edu	37	12	52842880	52842880	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT6C	286887	broad.mit.edu	37	12	52865661	52865661	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT71	112802	broad.mit.edu	37	12	52943828	52943828	+	Missense_Mutation	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT71	112802	broad.mit.edu	37	12	52946607	52946607	+	Silent	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT81	3887	broad.mit.edu	37	12	52681596	52681596	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT8	3856	broad.mit.edu	37	12	53293563	53293563	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT9	3857	broad.mit.edu	37	17	39727994	39727994	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP10-6	386674	broad.mit.edu	37	21	46011199	46011199	+	3'UTR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP12-2	353323	broad.mit.edu	37	21	46086600	46086600	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP13-1	140258	broad.mit.edu	37	21	31768471	31768471	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP20-3	337985	broad.mit.edu	37	21	32015437	32015437	+	3'UTR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP27-1	643812	broad.mit.edu	37	21	31709463	31709463	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP5-5	439915	broad.mit.edu	37	11	1651839	1651839	+	3'UTR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KSR2	283455	broad.mit.edu	37	12	118021462	118021462	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KTN1	3895	broad.mit.edu	37	14	56118535	56118535	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KTN1	3895	broad.mit.edu	37	14	56134081	56134081	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KTN1	3895	broad.mit.edu	37	14	56138199	56138199	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KY	339855	broad.mit.edu	37	3	134338144	134338144	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
L3MBTL2	83746	broad.mit.edu	37	22	41601247	41601247	+	5'Flank	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAIR1	3903	broad.mit.edu	37	19	54867942	54867942	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA1	284217	broad.mit.edu	37	18	6982615	6982615	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA1	284217	broad.mit.edu	37	18	7013956	7013956	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA1	284217	broad.mit.edu	37	18	7038532	7038532	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA4	3910	broad.mit.edu	37	6	112463444	112463444	+	Silent	SNP	C	A	A	rs111587919		TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMB4	22798	broad.mit.edu	37	7	107684183	107684183	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMB4	22798	broad.mit.edu	37	7	107703433	107703433	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMC2	3918	broad.mit.edu	37	1	183181585	183181585	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMC2	3918	broad.mit.edu	37	1	183186972	183186972	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMP2	3920	broad.mit.edu	37	X	119576890	119576890	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAS1L	81887	broad.mit.edu	37	X	64743931	64743931	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LASS6	253782	broad.mit.edu	37	2	169362619	169362619	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LBXCOR1	390598	broad.mit.edu	37	15	68118621	68118621	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCE3E	353145	broad.mit.edu	37	1	152538915	152538915	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCE4A	199834	broad.mit.edu	37	1	152681593	152681593	+	Silent	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCMT1	51451	broad.mit.edu	37	16	25143620	25143620	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCP2	3937	broad.mit.edu	37	5	169724459	169724459	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCT	3938	broad.mit.edu	37	2	136569960	136569960	+	Silent	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCT	3938	broad.mit.edu	37	2	136575035	136575035	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LDB2	9079	broad.mit.edu	37	4	16512023	16512023	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LDB2	9079	broad.mit.edu	37	4	16587650	16587650	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEF1	51176	broad.mit.edu	37	4	109037536	109037536	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEMD2	221496	broad.mit.edu	37	6	33748822	33748822	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEPR	3953	broad.mit.edu	37	1	65971062	65971062	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEPR	3953	broad.mit.edu	37	1	66058460	66058460	+	Silent	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEP	3952	broad.mit.edu	37	7	127894609	127894609	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGI2	55203	broad.mit.edu	37	4	25007834	25007834	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGR6	59352	broad.mit.edu	37	1	202204706	202204706	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LHFPL1	340596	broad.mit.edu	37	X	111920123	111920123	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LHFPL3	375612	broad.mit.edu	37	7	104171817	104171817	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LHFPL3	375612	broad.mit.edu	37	7	104308262	104308262	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LHFPL3	375612	broad.mit.edu	37	7	104457345	104457345	+	Intron	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRA3	11026	broad.mit.edu	37	19	54804266	54804266	+	5'Flank	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRB1	10859	broad.mit.edu	37	19	55142738	55142738	+	Silent	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRB4	11006	broad.mit.edu	37	19	55178383	55178383	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRB4	11006	broad.mit.edu	37	19	55179316	55179316	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRP2	79166	broad.mit.edu	37	19	55220651	55220651	+	RNA	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIMCH1	22998	broad.mit.edu	37	4	41404228	41404228	+	Intron	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIMCH1	22998	broad.mit.edu	37	4	41469572	41469572	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIMCH1	22998	broad.mit.edu	37	4	41691715	41691715	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIMS2	55679	broad.mit.edu	37	2	128436463	128436463	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIMS3-LOC440895	100271835	broad.mit.edu	37	2	111190448	111190448	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIN28B	389421	broad.mit.edu	37	6	105526482	105526482	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LINGO2	158038	broad.mit.edu	37	9	27949430	27949430	+	Nonsense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LINGO2	158038	broad.mit.edu	37	9	28291998	28291998	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIPC	3990	broad.mit.edu	37	15	58805848	58805848	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIPC	3990	broad.mit.edu	37	15	58812788	58812788	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LITAF	9516	broad.mit.edu	37	16	11647369	11647369	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMTK3	114783	broad.mit.edu	37	19	49005404	49005404	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMX1A	4009	broad.mit.edu	37	1	165182991	165182991	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMX1A	4009	broad.mit.edu	37	1	165192717	165192717	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMX1A	4009	broad.mit.edu	37	1	165322458	165322458	+	Missense_Mutation	SNP	G	A	A	rs139738225		TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LNP1	348801	broad.mit.edu	37	3	100148663	100148663	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC100130331	100130331	broad.mit.edu	37	1	238090744	238090745	+	RNA	DNP	GG	CT	CT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC100133308	100133308	broad.mit.edu	37	10	45644185	45644185	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC100272228	100272228	broad.mit.edu	37	X	149143929	149143929	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC100272228	100272228	broad.mit.edu	37	X	149161082	149161082	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC100272228	100272228	broad.mit.edu	37	X	149223689	149223689	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC100272228	100272228	broad.mit.edu	37	X	149226022	149226022	+	Intron	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC100272228	100272228	broad.mit.edu	37	X	149226024	149226024	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC100272228	100272228	broad.mit.edu	37	X	149246682	149246682	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC100272228	100272228	broad.mit.edu	37	X	149387914	149387914	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC100287718	100287718	broad.mit.edu	37	6	46721596	46721596	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC100302640	100302640	broad.mit.edu	37	3	106706893	106706893	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC100302640	100302640	broad.mit.edu	37	3	106758711	106758711	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC150568	150568	broad.mit.edu	37	2	105099883	105099883	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC200030	200030	broad.mit.edu	37	1	147966803	147966803	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC200726	200726	broad.mit.edu	37	2	207509173	207509173	+	Silent	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC255025	255025	broad.mit.edu	37	3	94780554	94780554	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC283867	283867	broad.mit.edu	37	16	65555278	65555278	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC285501	285501	broad.mit.edu	37	4	178821481	178821481	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC285692	285692	broad.mit.edu	37	5	9731587	9731587	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC285692	285692	broad.mit.edu	37	5	9823661	9823661	+	Intron	DEL	A	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC285692	285692	broad.mit.edu	37	5	9885673	9885673	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC285768	285768	broad.mit.edu	37	6	968517	968517	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC285780	285780	broad.mit.edu	37	6	6352503	6352503	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC285780	285780	broad.mit.edu	37	6	6585022	6585022	+	Intron	SNP	G	A	A	rs146803606	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC285954	285954	broad.mit.edu	37	7	41781185	41781185	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC338651	338651	broad.mit.edu	37	11	1605549	1605549	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC339568	339568	broad.mit.edu	37	20	37844065	37844065	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC340074	340074	broad.mit.edu	37	5	134992107	134992107	+	5'Flank	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC344967	344967	broad.mit.edu	37	4	40045147	40045147	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC400759	400759	broad.mit.edu	37	1	89890068	89890068	+	RNA	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC441089	441089	broad.mit.edu	37	5	79646948	79646948	+	RNA	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC441601	441601	broad.mit.edu	37	11	50254440	50254440	+	RNA	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC442459	442459	broad.mit.edu	37	X	98800299	98800299	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC442459	442459	broad.mit.edu	37	X	98975949	98975949	+	RNA	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC442459	442459	broad.mit.edu	37	X	98980846	98980846	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC554202	554202	broad.mit.edu	37	9	21492603	21492603	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC554202	554202	broad.mit.edu	37	9	21538802	21538802	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC641298	641298	broad.mit.edu	37	16	22480393	22480393	+	RNA	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC642597	642597	broad.mit.edu	37	18	5184795	5184795	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC643837	643837	broad.mit.edu	37	1	773140	773140	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC644669	644669	broad.mit.edu	37	18	15325892	15325892	+	RNA	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC645166	645166	broad.mit.edu	37	1	148948272	148948272	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC645166	645166	broad.mit.edu	37	1	148951265	148951265	+	RNA	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC647309	647309	broad.mit.edu	37	3	190575661	190575661	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC647946	647946	broad.mit.edu	37	18	36835119	36835119	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC650368	650368	broad.mit.edu	37	11	3412147	3412147	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC654342	654342	broad.mit.edu	37	2	91815335	91815335	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC654342	654342	broad.mit.edu	37	2	91815995	91815995	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC654342	654342	broad.mit.edu	37	2	91816953	91816953	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC654342	654342	broad.mit.edu	37	2	91833051	91833051	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC654342	654342	broad.mit.edu	37	2	91833979	91833979	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC728855	728855	broad.mit.edu	37	1	149648532	149648532	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC92249	92249	broad.mit.edu	37	X	62712171	62712171	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC96610	96610	broad.mit.edu	37	22	22550386	22550386	+	RNA	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC96610	96610	broad.mit.edu	37	22	22782198	22782198	+	RNA	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC96610	96610	broad.mit.edu	37	22	22923034	22923034	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC96610	96610	broad.mit.edu	37	22	23055827	23055827	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC96610	96610	broad.mit.edu	37	22	23247293	23247293	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LONRF3	79836	broad.mit.edu	37	X	118116994	118116994	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOXHD1	125336	broad.mit.edu	37	18	44181931	44181931	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOXHD1	125336	broad.mit.edu	37	18	44236579	44236579	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOXL2	4017	broad.mit.edu	37	8	23198531	23198531	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPAL2	80350	broad.mit.edu	37	6	160887895	160887895	+	RNA	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPA	4018	broad.mit.edu	37	6	160958713	160958713	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPA	4018	broad.mit.edu	37	6	161027641	161027641	+	Missense_Mutation	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPHN2	23266	broad.mit.edu	37	1	81820213	81820213	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPHN3	23284	broad.mit.edu	37	4	62445166	62445166	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPHN3	23284	broad.mit.edu	37	4	62641234	62641234	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPHN3	23284	broad.mit.edu	37	4	62641248	62641248	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPHN3	23284	broad.mit.edu	37	4	62812489	62812489	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPHN3	23284	broad.mit.edu	37	4	62873388	62873388	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPHN3	23284	broad.mit.edu	37	4	62894560	62894560	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPO	4025	broad.mit.edu	37	17	56342334	56342334	+	Missense_Mutation	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPPR1	54886	broad.mit.edu	37	9	104048198	104048198	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPP	4026	broad.mit.edu	37	3	187998453	187998453	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRCH1	23143	broad.mit.edu	37	13	47279601	47279601	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRFN2	57497	broad.mit.edu	37	6	40399611	40399611	+	Silent	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRFN2	57497	broad.mit.edu	37	6	40530110	40530110	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRFN3	79414	broad.mit.edu	37	19	36430220	36430220	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRFN5	145581	broad.mit.edu	37	14	42345838	42345838	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRIT1	26103	broad.mit.edu	37	10	85994140	85994140	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRIT1	26103	broad.mit.edu	37	10	86000937	86000937	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141278851	141278851	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141441466	141441466	+	Intron	DEL	A	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141732748	141732748	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141757837	141757837	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141819872	141819872	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141934010	141934011	+	Intron	DNP	GG	TT	TT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141986699	141986699	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	142003428	142003428	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP2	4036	broad.mit.edu	37	2	170031643	170031643	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP2	4036	broad.mit.edu	37	2	170062157	170062157	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP5	4041	broad.mit.edu	37	11	68181230	68181230	+	Nonsense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC10	376132	broad.mit.edu	37	12	70004028	70004028	+	Silent	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC16A	55604	broad.mit.edu	37	6	25344339	25344339	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC16A	55604	broad.mit.edu	37	6	25460756	25460756	+	Intron	SNP	C	T	T	rs142056931	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC3B	116135	broad.mit.edu	37	3	26729888	26729888	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC4C	57689	broad.mit.edu	37	11	40136407	40136408	+	Frame_Shift_Ins	INS	-	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC4C	57689	broad.mit.edu	37	11	40172506	40172506	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC4C	57689	broad.mit.edu	37	11	40373735	40373735	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC4C	57689	broad.mit.edu	37	11	40612818	40612818	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC4C	57689	broad.mit.edu	37	11	41070552	41070552	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC4C	57689	broad.mit.edu	37	11	41304951	41304951	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC4C	57689	broad.mit.edu	37	11	41418743	41418743	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC4C	57689	broad.mit.edu	37	11	41450648	41450648	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC66	339977	broad.mit.edu	37	4	52861525	52861525	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC7	57554	broad.mit.edu	37	1	70239413	70239413	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC7	57554	broad.mit.edu	37	1	70429784	70429784	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC7	57554	broad.mit.edu	37	1	70504333	70504333	+	Missense_Mutation	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC7	57554	broad.mit.edu	37	1	70587567	70587567	+	Silent	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC8C	84230	broad.mit.edu	37	1	90128787	90128787	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC8D	55144	broad.mit.edu	37	1	90369887	90369887	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRCC1	85444	broad.mit.edu	37	8	86042394	86042394	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRIQ4	344657	broad.mit.edu	37	3	169540006	169540006	+	Silent	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRK2	120892	broad.mit.edu	37	12	40619023	40619026	+	Frame_Shift_Del	DEL	ACAG	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRN3	54674	broad.mit.edu	37	7	110763980	110763980	+	Silent	SNP	C	A	A	rs142935034		TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRTM4	80059	broad.mit.edu	37	2	76998031	76998031	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRTM4	80059	broad.mit.edu	37	2	77598548	77598548	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRTM1	57408	broad.mit.edu	37	3	54952837	54952837	+	Nonsense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRWD1	222229	broad.mit.edu	37	7	102110022	102110022	+	Silent	SNP	G	A	A	rs140653534		TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LSAMP	4045	broad.mit.edu	37	3	115557124	115557124	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LSAMP	4045	broad.mit.edu	37	3	115687980	115687980	+	Intron	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LSAMP	4045	broad.mit.edu	37	3	115743042	115743042	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LSAMP	4045	broad.mit.edu	37	3	115912592	115912592	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LSAMP	4045	broad.mit.edu	37	3	116001336	116001336	+	Intron	SNP	C	T	T	rs147124610	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LSAMP	4045	broad.mit.edu	37	3	116002719	116002719	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LSAMP	4045	broad.mit.edu	37	3	116007124	116007124	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LSAMP	4045	broad.mit.edu	37	3	116163900	116163900	+	5'UTR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LSG1	55341	broad.mit.edu	37	3	194383239	194383239	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LSM11	134353	broad.mit.edu	37	5	157178528	157178528	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LSM2	57819	broad.mit.edu	37	6	31766222	31766222	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LSM5	23658	broad.mit.edu	37	7	32528841	32528841	+	Intron	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LTBP1	4052	broad.mit.edu	37	2	33572688	33572688	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LUZP2	338645	broad.mit.edu	37	11	25004696	25004696	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LUZP2	338645	broad.mit.edu	37	11	25030049	25030049	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYPD6	130574	broad.mit.edu	37	2	150237672	150237672	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYPLA1	10434	broad.mit.edu	37	8	54978405	54978405	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYST	1130	broad.mit.edu	37	1	235878332	235878332	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MACROD2	140733	broad.mit.edu	37	20	14606174	14606174	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MACROD2	140733	broad.mit.edu	37	20	14957109	14957109	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MACROD2	140733	broad.mit.edu	37	20	15240571	15240571	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAD1L1	8379	broad.mit.edu	37	7	2078097	2078097	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAD2L1	4085	broad.mit.edu	37	4	120982124	120982124	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEA12	4111	broad.mit.edu	37	X	151899836	151899836	+	3'UTR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEA6	4105	broad.mit.edu	37	X	151870280	151870280	+	3'UTR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEB3	4114	broad.mit.edu	37	X	30254065	30254065	+	Silent	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEC1	9947	broad.mit.edu	37	X	140996309	140996309	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEC1	9947	broad.mit.edu	37	X	140996386	140996386	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEC2	51438	broad.mit.edu	37	X	141292017	141292018	+	Intron	DNP	CC	AA	AA			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGED1	9500	broad.mit.edu	37	X	51611413	51611413	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGED2	10916	broad.mit.edu	37	X	54837133	54837133	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEL2	54551	broad.mit.edu	37	15	23889166	23889166	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGI2	9863	broad.mit.edu	37	7	77789355	77789355	+	Silent	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGI2	9863	broad.mit.edu	37	7	77824078	77824078	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGI2	9863	broad.mit.edu	37	7	78755084	78755084	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGI3	260425	broad.mit.edu	37	1	114137054	114137054	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGT1	84061	broad.mit.edu	37	X	77126192	77126192	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGT1	84061	broad.mit.edu	37	X	77134662	77134662	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAG	4099	broad.mit.edu	37	19	35804104	35804104	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAK	4117	broad.mit.edu	37	6	10782701	10782701	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAML2	84441	broad.mit.edu	37	11	95817843	95817843	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAMLD1	10046	broad.mit.edu	37	X	149573640	149573641	+	Intron	DNP	CC	AA	AA			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAMLD1	10046	broad.mit.edu	37	X	149628276	149628276	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP1B	4131	broad.mit.edu	37	5	71482674	71482674	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP1B	4131	broad.mit.edu	37	5	71492222	71492222	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP1B	4131	broad.mit.edu	37	5	71493326	71493326	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP1D	254042	broad.mit.edu	37	2	172945153	172945153	+	3'UTR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP2K1	5604	broad.mit.edu	37	15	66773582	66773582	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP2K6	5608	broad.mit.edu	37	17	67452857	67452857	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP2K6	5608	broad.mit.edu	37	17	67484337	67484337	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP2K6	5608	broad.mit.edu	37	17	67501726	67501726	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K13	9175	broad.mit.edu	37	3	185047086	185047086	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K1	4214	broad.mit.edu	37	5	56160465	56160465	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K3	4215	broad.mit.edu	37	17	61768926	61768926	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K7	6885	broad.mit.edu	37	6	91260258	91260258	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP4K1	11184	broad.mit.edu	37	19	39106849	39106849	+	Missense_Mutation	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP4K2	5871	broad.mit.edu	37	11	64557476	64557476	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP4	4134	broad.mit.edu	37	3	47912757	47912757	+	Missense_Mutation	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPK10	5602	broad.mit.edu	37	4	86988935	86988935	+	Nonsense_Mutation	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPK3	5595	broad.mit.edu	37	16	30129042	30129042	+	Silent	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPKAPK2	9261	broad.mit.edu	37	1	206905121	206905121	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCH10	162333	broad.mit.edu	37	17	60814219	60814219	+	Missense_Mutation	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCH10	162333	broad.mit.edu	37	17	60865926	60865926	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCH11	441061	broad.mit.edu	37	5	16095727	16095727	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCH11	441061	broad.mit.edu	37	5	16178022	16178022	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCH1	55016	broad.mit.edu	37	4	164449808	164449808	+	3'UTR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCH1	55016	broad.mit.edu	37	4	164458007	164458007	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCH1	55016	broad.mit.edu	37	4	164534585	164534585	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCH1	55016	broad.mit.edu	37	4	164852480	164852480	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARK1	4139	broad.mit.edu	37	1	220804251	220804251	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARK2	2011	broad.mit.edu	37	11	63670795	63670795	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MASP1	5648	broad.mit.edu	37	3	186947812	186947812	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MASP1	5648	broad.mit.edu	37	3	186990521	186990521	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MASP1	5648	broad.mit.edu	37	3	187003888	187003888	+	Intron	SNP	G	T	T	rs2287365	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAT1A	4143	broad.mit.edu	37	10	82043561	82043561	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MBL2	4153	broad.mit.edu	37	10	54530522	54530522	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MBNL2	10150	broad.mit.edu	37	13	97893162	97893162	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MBOAT1	154141	broad.mit.edu	37	6	20191747	20191747	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MBOAT1	154141	broad.mit.edu	37	6	20207113	20207113	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MBTPS1	8720	broad.mit.edu	37	16	84089846	84089846	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MC2R	4158	broad.mit.edu	37	18	13918292	13918292	+	5'Flank	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCART3P	442229	broad.mit.edu	37	6	66498583	66498583	+	RNA	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCCC1	56922	broad.mit.edu	37	3	182769856	182769856	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCF2L2	23101	broad.mit.edu	37	3	182948805	182948805	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCF2	4168	broad.mit.edu	37	X	138735663	138735663	+	Intron	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCM6	4175	broad.mit.edu	37	2	136626298	136626298	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCOLN2	255231	broad.mit.edu	37	1	85462473	85462474	+	Intron	DNP	CC	AA	AA			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCOLN3	55283	broad.mit.edu	37	1	85506817	85506817	+	Missense_Mutation	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCTP1	79772	broad.mit.edu	37	5	94289137	94289137	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCTP2	55784	broad.mit.edu	37	15	94903134	94903134	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCTP2	55784	broad.mit.edu	37	15	94927252	94927252	+	Silent	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCTP2	55784	broad.mit.edu	37	15	95001378	95001378	+	Missense_Mutation	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDGA2	161357	broad.mit.edu	37	14	47426612	47426612	+	Missense_Mutation	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDGA2	161357	broad.mit.edu	37	14	47572432	47572432	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDGA2	161357	broad.mit.edu	37	14	47627911	47627911	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDGA2	161357	broad.mit.edu	37	14	47693720	47693720	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDGA2	161357	broad.mit.edu	37	14	47994458	47994458	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDGA2	161357	broad.mit.edu	37	14	48000815	48000815	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDGA2	161357	broad.mit.edu	37	14	48035913	48035913	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDGA2	161357	broad.mit.edu	37	14	48063288	48063288	+	Intron	DEL	C	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDGA2	161357	broad.mit.edu	37	14	48079330	48079330	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDH1B	130752	broad.mit.edu	37	2	207610350	207610350	+	Missense_Mutation	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDN1	23195	broad.mit.edu	37	6	90457211	90457211	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MECOM	2122	broad.mit.edu	37	3	169304454	169304454	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED12L	116931	broad.mit.edu	37	3	150819924	150819924	+	Intron	SNP	G	T	T	rs139386238	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED12L	116931	broad.mit.edu	37	3	150881912	150881912	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED12L	116931	broad.mit.edu	37	3	151093991	151093991	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED12L	116931	broad.mit.edu	37	3	151097983	151097983	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED12L	116931	broad.mit.edu	37	3	151131111	151131111	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED12	9968	broad.mit.edu	37	X	70341093	70341093	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED12	9968	broad.mit.edu	37	X	70347242	70347242	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED12	9968	broad.mit.edu	37	X	70353112	70353112	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED28	80306	broad.mit.edu	37	4	17616473	17616473	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEG3	55384	broad.mit.edu	37	14	101324173	101324173	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEGF11	84465	broad.mit.edu	37	15	66458271	66458271	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEGF11	84465	broad.mit.edu	37	15	66491104	66491104	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEI1	150365	broad.mit.edu	37	22	42177405	42177405	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEIS2	4212	broad.mit.edu	37	15	37319596	37319597	+	Intron	DNP	CC	AA	AA	rs146330227	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MELK	9833	broad.mit.edu	37	9	36597178	36597178	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEN1	4221	broad.mit.edu	37	11	64575497	64575497	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEPE	56955	broad.mit.edu	37	4	88759977	88759977	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MERTK	10461	broad.mit.edu	37	2	112725609	112725609	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
METT5D1	196074	broad.mit.edu	37	11	28179447	28179447	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
METTL7B	196410	broad.mit.edu	37	12	56077939	56077939	+	3'UTR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MET	4233	broad.mit.edu	37	7	116372728	116372728	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MFAP5	8076	broad.mit.edu	37	12	8808317	8808317	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MFSD2A	84879	broad.mit.edu	37	1	40432949	40432949	+	Intron	SNP	G	C	C	rs74067887	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAM	8972	broad.mit.edu	37	7	141722155	141722155	+	Silent	SNP	G	T	T	rs146615509	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAM	8972	broad.mit.edu	37	7	141725064	141725064	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAM	8972	broad.mit.edu	37	7	141775886	141775886	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAM	8972	broad.mit.edu	37	7	141782958	141782958	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAT3	4248	broad.mit.edu	37	22	39883522	39883522	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAT4C	25834	broad.mit.edu	37	12	86377322	86377322	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGC27382	149047	broad.mit.edu	37	1	78726995	78726995	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MICAL1	64780	broad.mit.edu	37	6	109771184	109771184	+	Silent	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MID1	4281	broad.mit.edu	37	X	10829015	10829015	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MID2	11043	broad.mit.edu	37	X	107152673	107152673	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MID2	11043	broad.mit.edu	37	X	107169511	107169511	+	Silent	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIER2	54531	broad.mit.edu	37	19	328043	328043	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIER3	166968	broad.mit.edu	37	5	56229127	56229127	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MINPP1	9562	broad.mit.edu	37	10	89296519	89296519	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIPOL1	145282	broad.mit.edu	37	14	37832876	37832876	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR1244	100302285	broad.mit.edu	37	12	9392874	9392874	+	5'Flank	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR379	494328	broad.mit.edu	37	14	101488430	101488430	+	RNA	SNP	G	T	T	rs115827677	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR490	574443	broad.mit.edu	37	7	136587960	136587960	+	RNA	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR492	574449	broad.mit.edu	37	12	95225490	95225490	+	5'Flank	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR492	574449	broad.mit.edu	37	12	95227966	95227966	+	5'Flank	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR506	574511	broad.mit.edu	37	X	146313435	146313435	+	5'Flank	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR509-2	100126301	broad.mit.edu	37	X	146340397	146340397	+	5'Flank	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR509-2	100126301	broad.mit.edu	37	X	146341283	146341283	+	5'Flank	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR514-2	574517	broad.mit.edu	37	X	146365996	146365996	+	5'Flank	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR890	100126303	broad.mit.edu	37	X	145076449	145076449	+	5'Flank	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MITF	4286	broad.mit.edu	37	3	69983369	69983369	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIXL1	83881	broad.mit.edu	37	1	226413423	226413423	+	Missense_Mutation	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MKI67	4288	broad.mit.edu	37	10	129908547	129908547	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MKNK1	8569	broad.mit.edu	37	1	47042394	47042394	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLH1	4292	broad.mit.edu	37	3	37067448	37067448	+	Silent	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL2	8085	broad.mit.edu	37	12	49422638	49422638	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL3	58508	broad.mit.edu	37	7	151933018	151933018	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL4	9757	broad.mit.edu	37	19	36211923	36211923	+	Silent	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLLT10	8028	broad.mit.edu	37	10	22006822	22006822	+	Intron	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMD	23531	broad.mit.edu	37	17	53476782	53476782	+	Intron	DEL	C	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP16	4325	broad.mit.edu	37	8	89261924	89261924	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP16	4325	broad.mit.edu	37	8	89285426	89285426	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP16	4325	broad.mit.edu	37	8	89324145	89324145	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP1	4312	broad.mit.edu	37	11	102667239	102667239	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP20	9313	broad.mit.edu	37	11	102465522	102465522	+	Intron	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP20	9313	broad.mit.edu	37	11	102487414	102487414	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP26	56547	broad.mit.edu	37	11	5010972	5010972	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP3	4314	broad.mit.edu	37	11	102709160	102709160	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP3	4314	broad.mit.edu	37	11	102709771	102709771	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP3	4314	broad.mit.edu	37	11	102713391	102713391	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP8	4317	broad.mit.edu	37	11	102584381	102584381	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MNDA	4332	broad.mit.edu	37	1	158813531	158813531	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MNS1	55329	broad.mit.edu	37	15	56757335	56757335	+	5'UTR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOCS1	4337	broad.mit.edu	37	6	39881105	39881106	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOG	4340	broad.mit.edu	37	6	29635537	29635538	+	Intron	DNP	CC	AA	AA			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MON2	23041	broad.mit.edu	37	12	62918364	62918364	+	Silent	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MORC1	27136	broad.mit.edu	37	3	108710532	108710532	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MORC1	27136	broad.mit.edu	37	3	108751675	108751675	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MORC1	27136	broad.mit.edu	37	3	108818418	108818418	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MORC4	79710	broad.mit.edu	37	X	106228602	106228602	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MORF4L1	10933	broad.mit.edu	37	15	79189395	79189395	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOSC1	64757	broad.mit.edu	37	1	220974932	220974932	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOXD1	26002	broad.mit.edu	37	6	132673792	132673793	+	Intron	DNP	GT	TC	TC			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPDZ	8777	broad.mit.edu	37	9	13125615	13125615	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPP1	4354	broad.mit.edu	37	X	154020334	154020334	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPP4	58538	broad.mit.edu	37	2	202541739	202541739	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPPED2	744	broad.mit.edu	37	11	30410206	30410206	+	3'UTR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPPED2	744	broad.mit.edu	37	11	30435856	30435856	+	Nonsense_Mutation	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPPED2	744	broad.mit.edu	37	11	30561881	30561881	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRAP2	112609	broad.mit.edu	37	6	84772655	84772655	+	Silent	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRGPRX2	117194	broad.mit.edu	37	11	19077787	19077787	+	Silent	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPL38	64978	broad.mit.edu	37	17	73897091	73897091	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MS4A14	84689	broad.mit.edu	37	11	60167844	60167844	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MS4A3	932	broad.mit.edu	37	11	59830233	59830233	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MS4A8B	83661	broad.mit.edu	37	11	60473960	60473961	+	Intron	DNP	GC	TT	TT	rs142724372	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSH2	4436	broad.mit.edu	37	2	47818186	47818186	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSH4	4438	broad.mit.edu	37	1	76349377	76349378	+	Missense_Mutation	DNP	GA	TT	TT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSI2	124540	broad.mit.edu	37	17	55583564	55583564	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSL3	10943	broad.mit.edu	37	X	11790814	11790814	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSRA	4482	broad.mit.edu	37	8	9948345	9948345	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSRA	4482	broad.mit.edu	37	8	9958038	9958038	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MST4	51765	broad.mit.edu	37	X	131202584	131202584	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSX2P1	55545	broad.mit.edu	37	17	56234946	56234946	+	RNA	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTCP1	4515	broad.mit.edu	37	X	154294390	154294390	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTG1	92170	broad.mit.edu	37	10	135215527	135215527	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTHFD1L	25902	broad.mit.edu	37	6	151358403	151358403	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTM1	4534	broad.mit.edu	37	X	149764347	149764347	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTM1	4534	broad.mit.edu	37	X	149767270	149767270	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTM1	4534	broad.mit.edu	37	X	149775056	149775056	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTM1	4534	broad.mit.edu	37	X	149807451	149807451	+	Silent	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR14	64419	broad.mit.edu	37	3	9711261	9711261	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR1	8776	broad.mit.edu	37	X	149877189	149877189	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR1	8776	broad.mit.edu	37	X	149899000	149899000	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR1	8776	broad.mit.edu	37	X	149899011	149899011	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR1	8776	broad.mit.edu	37	X	149899014	149899014	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR6	9107	broad.mit.edu	37	13	25840041	25840041	+	Silent	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR8	55613	broad.mit.edu	37	X	63445199	63445199	+	Missense_Mutation	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR8	55613	broad.mit.edu	37	X	63616863	63616863	+	5'Flank	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTOR	2475	broad.mit.edu	37	1	11181391	11181391	+	Missense_Mutation	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTOR	2475	broad.mit.edu	37	1	11270872	11270872	+	Missense_Mutation	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTOR	2475	broad.mit.edu	37	1	11313974	11313974	+	Silent	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTRR	4552	broad.mit.edu	37	5	7893138	7893138	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTRR	4552	broad.mit.edu	37	5	7899049	7899049	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTUS2	23281	broad.mit.edu	37	13	29665971	29665971	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTUS2	23281	broad.mit.edu	37	13	29855846	29855846	+	Missense_Mutation	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTUS2	23281	broad.mit.edu	37	13	29881344	29881344	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTUS2	23281	broad.mit.edu	37	13	29970104	29970104	+	Intron	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC12	10071	broad.mit.edu	37	7	100648570	100648570	+	Missense_Mutation	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	8996360	8996360	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9002182	9002182	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9015877	9015877	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9024030	9024030	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9024973	9024973	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9045757	9045757	+	Silent	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9046257	9046258	+	Frame_Shift_Del	DEL	AC	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC17	140453	broad.mit.edu	37	7	100676089	100676089	+	Silent	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC17	140453	broad.mit.edu	37	7	100696130	100696130	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC20	200958	broad.mit.edu	37	3	195453534	195453534	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUSK	4593	broad.mit.edu	37	9	113562632	113562632	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYADML	151325	broad.mit.edu	37	2	33952275	33952275	+	Missense_Mutation	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYADML	151325	broad.mit.edu	37	2	33952554	33952554	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYBBP1A	10514	broad.mit.edu	37	17	4442371	4442371	+	3'UTR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYBL1	4603	broad.mit.edu	37	8	67525021	67525021	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYBL2	4605	broad.mit.edu	37	20	42315707	42315707	+	Silent	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYBL2	4605	broad.mit.edu	37	20	42331064	42331064	+	Intron	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYCBP2	23077	broad.mit.edu	37	13	77755891	77755891	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYCBPAP	84073	broad.mit.edu	37	17	48608814	48608814	+	3'UTR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYCN	4613	broad.mit.edu	37	2	16082254	16082254	+	Nonsense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH11	4629	broad.mit.edu	37	16	15865159	15865159	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH15	22989	broad.mit.edu	37	3	108160130	108160130	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH15	22989	broad.mit.edu	37	3	108183706	108183706	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH15	22989	broad.mit.edu	37	3	108211572	108211572	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH1	4619	broad.mit.edu	37	17	10406170	10406170	+	Missense_Mutation	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH2	4620	broad.mit.edu	37	17	10432343	10432343	+	Silent	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH6	4624	broad.mit.edu	37	14	23857155	23857155	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH7	4625	broad.mit.edu	37	14	23885064	23885064	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH7	4625	broad.mit.edu	37	14	23886622	23886622	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH7	4625	broad.mit.edu	37	14	23899882	23899882	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYL1	4632	broad.mit.edu	37	2	211163081	211163081	+	Intron	SNP	C	A	A	rs34356729		TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYL2	4633	broad.mit.edu	37	12	111353395	111353395	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO16	23026	broad.mit.edu	37	13	109777411	109777411	+	Intron	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO16	23026	broad.mit.edu	37	13	109825487	109825487	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO18B	84700	broad.mit.edu	37	22	26219563	26219563	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO18B	84700	broad.mit.edu	37	22	26231281	26231282	+	Missense_Mutation	DNP	GG	AT	AT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO1A	4640	broad.mit.edu	37	12	57436907	57436907	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO1A	4640	broad.mit.edu	37	12	57440758	57440759	+	Intron	DNP	CC	TA	TA			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO1A	4640	broad.mit.edu	37	12	57441514	57441514	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO1B	4430	broad.mit.edu	37	2	192231501	192231501	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO3B	140469	broad.mit.edu	37	2	171230626	171230626	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO5A	4644	broad.mit.edu	37	15	52632272	52632272	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO7A	4647	broad.mit.edu	37	11	76916516	76916516	+	Silent	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOD1	4654	broad.mit.edu	37	11	17743079	17743079	+	3'UTR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOF	26509	broad.mit.edu	37	10	95150191	95150191	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOM3	127294	broad.mit.edu	37	1	24394882	24394882	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOZ2	51778	broad.mit.edu	37	4	120085450	120085450	+	Missense_Mutation	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOZ2	51778	broad.mit.edu	37	4	120094540	120094540	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYRIP	25924	broad.mit.edu	37	3	39917379	39917379	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYT1L	23040	broad.mit.edu	37	2	1890417	1890417	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYT1L	23040	broad.mit.edu	37	2	1891528	1891528	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYT1L	23040	broad.mit.edu	37	2	2336220	2336220	+	5'Flank	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MZF1	7593	broad.mit.edu	37	19	59080680	59080680	+	Silent	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAALAD2	10003	broad.mit.edu	37	11	89903353	89903353	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NADSYN1	55191	broad.mit.edu	37	11	71184605	71184605	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAGK	55577	broad.mit.edu	37	2	71302930	71302930	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NALCN	259232	broad.mit.edu	37	13	101757000	101757000	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NALCN	259232	broad.mit.edu	37	13	101763498	101763498	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NALCN	259232	broad.mit.edu	37	13	101763591	101763591	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NALCN	259232	broad.mit.edu	37	13	101844188	101844188	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NALCN	259232	broad.mit.edu	37	13	102011156	102011156	+	Intron	SNP	C	T	T	rs140213170	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAP1L3	4675	broad.mit.edu	37	X	92928306	92928306	+	5'UTR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NARFL	64428	broad.mit.edu	37	16	780984	780984	+	Nonsense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NARF	26502	broad.mit.edu	37	17	80438944	80438944	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NARS	4677	broad.mit.edu	37	18	55287671	55287671	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAT15	79903	broad.mit.edu	37	16	3532549	3532549	+	Silent	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV3	89795	broad.mit.edu	37	12	78417100	78417100	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV3	89795	broad.mit.edu	37	12	78479543	78479543	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV3	89795	broad.mit.edu	37	12	78582521	78582521	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBAS	51594	broad.mit.edu	37	2	15560631	15560631	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBAS	51594	broad.mit.edu	37	2	15700034	15700034	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBEA	26960	broad.mit.edu	37	13	35644083	35644083	+	Frame_Shift_Del	DEL	G	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBEA	26960	broad.mit.edu	37	13	35998929	35998929	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF10	100132406	broad.mit.edu	37	1	145209118	145209118	+	5'UTR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF10	100132406	broad.mit.edu	37	1	145663406	145663406	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF14	25832	broad.mit.edu	37	1	148015798	148015798	+	Splice_Site	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF1	55672	broad.mit.edu	37	1	16907235	16907235	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF1	55672	broad.mit.edu	37	1	16913159	16913159	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF22P	285622	broad.mit.edu	37	5	85592194	85592195	+	3'UTR	DNP	CC	AA	AA			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF9	400818	broad.mit.edu	37	1	144189448	144189448	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF9	400818	broad.mit.edu	37	1	144814395	144814395	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF9	400818	broad.mit.edu	37	1	145103501	145103501	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF9	400818	broad.mit.edu	37	1	145172083	145172083	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCALD	83988	broad.mit.edu	37	8	102726108	102726108	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCAM1	4684	broad.mit.edu	37	11	112890062	112890062	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCAM1	4684	broad.mit.edu	37	11	113076156	113076156	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCKAP1L	3071	broad.mit.edu	37	12	54912553	54912553	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCKAP1L	3071	broad.mit.edu	37	12	54912556	54912556	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCKAP1L	3071	broad.mit.edu	37	12	54915041	54915041	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCKAP1L	3071	broad.mit.edu	37	12	54917263	54917263	+	Missense_Mutation	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCKAP5L	57701	broad.mit.edu	37	12	50195708	50195708	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCKAP5	344148	broad.mit.edu	37	2	133540014	133540014	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCKAP5	344148	broad.mit.edu	37	2	133652506	133652506	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCOA3	8202	broad.mit.edu	37	20	46268215	46268215	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCOR1	9611	broad.mit.edu	37	17	16029572	16029572	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCRNA00182	100302692	broad.mit.edu	37	X	73352347	73352347	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDP	4693	broad.mit.edu	37	X	43833142	43833142	+	5'Flank	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDST1	3340	broad.mit.edu	37	5	149895377	149895377	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDST3	9348	broad.mit.edu	37	4	119115790	119115790	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDST4	64579	broad.mit.edu	37	4	115791971	115791971	+	Frame_Shift_Del	DEL	G	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDST4	64579	broad.mit.edu	37	4	115838903	115838903	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDST4	64579	broad.mit.edu	37	4	115997856	115997856	+	Nonsense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDUFA5	4698	broad.mit.edu	37	7	123197294	123197294	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDUFA8	4702	broad.mit.edu	37	9	124910683	124910683	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDUFA9	4704	broad.mit.edu	37	12	4791498	4791498	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEB	4703	broad.mit.edu	37	2	152484310	152484310	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEB	4703	broad.mit.edu	37	2	152507102	152507102	+	Nonsense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEB	4703	broad.mit.edu	37	2	152520921	152520921	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEB	4703	broad.mit.edu	37	2	152522931	152522931	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEB	4703	broad.mit.edu	37	2	152576800	152576800	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEDD4L	23327	broad.mit.edu	37	18	56036959	56036959	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEDD9	4739	broad.mit.edu	37	6	11227897	11227897	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEDD9	4739	broad.mit.edu	37	6	11238181	11238181	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEGR1	257194	broad.mit.edu	37	1	72204031	72204032	+	Intron	DNP	CC	AA	AA			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEK10	152110	broad.mit.edu	37	3	27161262	27161262	+	Missense_Mutation	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEK10	152110	broad.mit.edu	37	3	27233413	27233413	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEK10	152110	broad.mit.edu	37	3	27279497	27279497	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEK11	79858	broad.mit.edu	37	3	130889805	130889805	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NELL1	4745	broad.mit.edu	37	11	20757995	20757995	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NELL1	4745	broad.mit.edu	37	11	21422289	21422289	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NELL2	4753	broad.mit.edu	37	12	44951165	44951165	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NELL2	4753	broad.mit.edu	37	12	45054187	45054187	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NELL2	4753	broad.mit.edu	37	12	45072544	45072544	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NELL2	4753	broad.mit.edu	37	12	45072793	45072793	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NELL2	4753	broad.mit.edu	37	12	45073002	45073002	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NELL2	4753	broad.mit.edu	37	12	45291178	45291178	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NES	10763	broad.mit.edu	37	1	156641642	156641642	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NETO1	81832	broad.mit.edu	37	18	70425712	70425712	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEURL4	84461	broad.mit.edu	37	17	7220677	7220677	+	Missense_Mutation	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NF1P1	440225	broad.mit.edu	37	15	21137529	21137529	+	5'Flank	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFASC	23114	broad.mit.edu	37	1	204814265	204814265	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFASC	23114	broad.mit.edu	37	1	204953162	204953162	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFATC2	4773	broad.mit.edu	37	20	50139722	50139722	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFATC2	4773	broad.mit.edu	37	20	50164289	50164289	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFIA	4774	broad.mit.edu	37	1	61857768	61857768	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFXL1	152518	broad.mit.edu	37	4	47853839	47853839	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFYA	4800	broad.mit.edu	37	6	41062141	41062141	+	Silent	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFYC	4802	broad.mit.edu	37	1	41223798	41223798	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NGEF	25791	broad.mit.edu	37	2	233834906	233834906	+	Intron	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NGLY1	55768	broad.mit.edu	37	3	25781055	25781055	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NHSL2	340527	broad.mit.edu	37	X	71359504	71359504	+	Silent	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NHS	4810	broad.mit.edu	37	X	17624938	17624938	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NHS	4810	broad.mit.edu	37	X	17689835	17689835	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NHS	4810	broad.mit.edu	37	X	17704905	17704905	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NHS	4810	broad.mit.edu	37	X	17715173	17715173	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NID1	4811	broad.mit.edu	37	1	236156731	236156731	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NID2	22795	broad.mit.edu	37	14	52527137	52527137	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NIN	51199	broad.mit.edu	37	14	51224111	51224111	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NIPSNAP3B	55335	broad.mit.edu	37	9	107533128	107533128	+	Splice_Site	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NKAIN1	79570	broad.mit.edu	37	1	31656765	31656765	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NKAIN3	286183	broad.mit.edu	37	8	63229160	63229160	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NKAIN3	286183	broad.mit.edu	37	8	63596403	63596404	+	Intron	DNP	GG	TT	TT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NKAIN3	286183	broad.mit.edu	37	8	63715874	63715874	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLGN1	22871	broad.mit.edu	37	3	173280774	173280774	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLGN1	22871	broad.mit.edu	37	3	173399090	173399090	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLGN4X	57502	broad.mit.edu	37	X	5821139	5821139	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLGN4X	57502	broad.mit.edu	37	X	5934822	5934822	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLGN4X	57502	broad.mit.edu	37	X	6023310	6023310	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRC5	84166	broad.mit.edu	37	16	57113416	57113416	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP11	204801	broad.mit.edu	37	19	56321105	56321105	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP12	91662	broad.mit.edu	37	19	54301321	54301321	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP12	91662	broad.mit.edu	37	19	54313961	54313961	+	Silent	SNP	G	T	T	rs140585311	byFrequency	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP14	338323	broad.mit.edu	37	11	7091627	7091627	+	Missense_Mutation	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP2	55655	broad.mit.edu	37	19	55492980	55492980	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP3	114548	broad.mit.edu	37	1	247587296	247587296	+	Missense_Mutation	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP3	114548	broad.mit.edu	37	1	247607262	247607262	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP4	147945	broad.mit.edu	37	19	56379305	56379305	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP4	147945	broad.mit.edu	37	19	56390126	56390126	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP4	147945	broad.mit.edu	37	19	56390279	56390279	+	Missense_Mutation	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP5	126206	broad.mit.edu	37	19	56539859	56539859	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP5	126206	broad.mit.edu	37	19	56552469	56552469	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP9	338321	broad.mit.edu	37	19	56243816	56243816	+	Silent	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP9	338321	broad.mit.edu	37	19	56249728	56249728	+	Missense_Mutation	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NME7	29922	broad.mit.edu	37	1	169169837	169169837	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NMUR2	56923	broad.mit.edu	37	5	151774923	151774923	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NNT	23530	broad.mit.edu	37	5	43628500	43628500	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NNT	23530	broad.mit.edu	37	5	43666814	43666814	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOMO2	283820	broad.mit.edu	37	16	18562584	18562584	+	Intron	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOS1	4842	broad.mit.edu	37	12	117705984	117705984	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOS1	4842	broad.mit.edu	37	12	117749484	117749484	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOS2	4843	broad.mit.edu	37	17	26098072	26098072	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOS2	4843	broad.mit.edu	37	17	26115622	26115622	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOS2	4843	broad.mit.edu	37	17	26143922	26143922	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOS3	4846	broad.mit.edu	37	7	150698505	150698505	+	Missense_Mutation	SNP	C	G	G	rs145805216		TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOSTRIN	115677	broad.mit.edu	37	2	169713352	169713352	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOTCH2	4853	broad.mit.edu	37	1	120505536	120505536	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOVA2	4858	broad.mit.edu	37	19	46475645	46475645	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOX1	27035	broad.mit.edu	37	X	100099015	100099015	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOX3	50508	broad.mit.edu	37	6	155721957	155721957	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOX4	50507	broad.mit.edu	37	11	89135496	89135496	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOX4	50507	broad.mit.edu	37	11	89293367	89293367	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPAS3	64067	broad.mit.edu	37	14	34134382	34134382	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPAS3	64067	broad.mit.edu	37	14	34134587	34134587	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPAS3	64067	broad.mit.edu	37	14	34243889	34243889	+	Intron	DEL	T	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPAS3	64067	broad.mit.edu	37	14	34247820	34247820	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPAS3	64067	broad.mit.edu	37	14	34268993	34268993	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPC1	4864	broad.mit.edu	37	18	21127808	21127808	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPHS1	4868	broad.mit.edu	37	19	36333185	36333185	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPL	80896	broad.mit.edu	37	1	182778213	182778213	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPL	80896	broad.mit.edu	37	1	182783996	182783996	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPNT	255743	broad.mit.edu	37	4	106858224	106858224	+	Silent	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPR2	4882	broad.mit.edu	37	9	35802274	35802274	+	Silent	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPR3	4883	broad.mit.edu	37	5	32758834	32758834	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPR3	4883	broad.mit.edu	37	5	32762043	32762043	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPR3	4883	broad.mit.edu	37	5	32774763	32774763	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPSR1	387129	broad.mit.edu	37	7	34818043	34818043	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR0B1	190	broad.mit.edu	37	X	30326950	30326950	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR1H4	9971	broad.mit.edu	37	12	100897224	100897224	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR1H4	9971	broad.mit.edu	37	12	100923148	100923148	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR4A2	4929	broad.mit.edu	37	2	157186347	157186347	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRAP	4892	broad.mit.edu	37	10	115423527	115423527	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRCAM	4897	broad.mit.edu	37	7	107825064	107825064	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRG1	3084	broad.mit.edu	37	8	32617815	32617816	+	Frame_Shift_Ins	INS	-	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRG3	10718	broad.mit.edu	37	10	83658165	83658165	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRG3	10718	broad.mit.edu	37	10	84219008	84219008	+	Intron	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRG3	10718	broad.mit.edu	37	10	84267236	84267236	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRG3	10718	broad.mit.edu	37	10	84399061	84399061	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRG3	10718	broad.mit.edu	37	10	84462708	84462708	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRIP2	83714	broad.mit.edu	37	12	2940243	2940243	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRK	203447	broad.mit.edu	37	X	105088020	105088020	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN1	9378	broad.mit.edu	37	2	50731522	50731522	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN1	9378	broad.mit.edu	37	2	51001026	51001026	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN1	9378	broad.mit.edu	37	2	51254928	51254928	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN3	9369	broad.mit.edu	37	14	78641072	78641072	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN3	9369	broad.mit.edu	37	14	78701557	78701557	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN3	9369	broad.mit.edu	37	14	78844497	78844497	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN3	9369	broad.mit.edu	37	14	78945894	78945894	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN3	9369	broad.mit.edu	37	14	79013591	79013591	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN3	9369	broad.mit.edu	37	14	79065036	79065036	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN3	9369	broad.mit.edu	37	14	79110864	79110864	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN3	9369	broad.mit.edu	37	14	79158099	79158099	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN3	9369	broad.mit.edu	37	14	79175701	79175701	+	Nonsense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN3	9369	broad.mit.edu	37	14	79189823	79189823	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN3	9369	broad.mit.edu	37	14	79274893	79274893	+	Intron	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN3	9369	broad.mit.edu	37	14	79276709	79276709	+	Intron	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN3	9369	broad.mit.edu	37	14	79359246	79359246	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN3	9369	broad.mit.edu	37	14	80316083	80316083	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN3	9369	broad.mit.edu	37	14	80318074	80318074	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSDHL	50814	broad.mit.edu	37	X	152014961	152014961	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSDHL	50814	broad.mit.edu	37	X	152031427	152031427	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSMCE2	286053	broad.mit.edu	37	8	126179325	126179325	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSUN3	63899	broad.mit.edu	37	3	93794825	93794825	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSUN5	55695	broad.mit.edu	37	7	72722405	72722405	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSUN6	221078	broad.mit.edu	37	10	18885334	18885334	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSUN7	79730	broad.mit.edu	37	4	40752747	40752747	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NT5C1B	93034	broad.mit.edu	37	2	18768074	18768074	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NT5DC1	221294	broad.mit.edu	37	6	116506751	116506751	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTF3	4908	broad.mit.edu	37	12	5589057	5589057	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTM	50863	broad.mit.edu	37	11	131260547	131260547	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTM	50863	broad.mit.edu	37	11	131264629	131264629	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTM	50863	broad.mit.edu	37	11	131465773	131465773	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTM	50863	broad.mit.edu	37	11	131593380	131593380	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTM	50863	broad.mit.edu	37	11	132104222	132104222	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTNG1	22854	broad.mit.edu	37	1	107761410	107761410	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTNG1	22854	broad.mit.edu	37	1	107851590	107851590	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTNG1	22854	broad.mit.edu	37	1	108003041	108003041	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTRK2	4915	broad.mit.edu	37	9	87446583	87446583	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTRK3	4916	broad.mit.edu	37	15	88483884	88483884	+	Silent	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTRK3	4916	broad.mit.edu	37	15	88533306	88533306	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTRK3	4916	broad.mit.edu	37	15	88600980	88600980	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTRK3	4916	broad.mit.edu	37	15	88678516	88678516	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTRK3	4916	broad.mit.edu	37	15	88679618	88679618	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTRK3	4916	broad.mit.edu	37	15	88792254	88792254	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUB1	51667	broad.mit.edu	37	7	151046189	151046189	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUBP1	4682	broad.mit.edu	37	16	10863034	10863034	+	3'UTR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUDCD3	23386	broad.mit.edu	37	7	44525474	44525474	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUDT7	283927	broad.mit.edu	37	16	77769779	77769779	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUF2	83540	broad.mit.edu	37	1	163292091	163292091	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP210	23225	broad.mit.edu	37	3	13381837	13381837	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP62CL	54830	broad.mit.edu	37	X	106415552	106415552	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF3	56000	broad.mit.edu	37	X	102337945	102337945	+	Silent	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF3	56000	broad.mit.edu	37	X	102339093	102339093	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF4	55999	broad.mit.edu	37	X	101818786	101818786	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF5	55998	broad.mit.edu	37	X	101095097	101095097	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF5	55998	broad.mit.edu	37	X	101096941	101096942	+	Frame_Shift_Del	DEL	GG	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXPH1	30010	broad.mit.edu	37	7	8578790	8578790	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OAS3	4940	broad.mit.edu	37	12	113398978	113398978	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OBSCN	84033	broad.mit.edu	37	1	228437432	228437432	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OC90	729330	broad.mit.edu	37	8	133062304	133062304	+	5'Flank	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODF2	4957	broad.mit.edu	37	9	131246315	131246315	+	Frame_Shift_Del	DEL	C	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ1	10178	broad.mit.edu	37	X	123518372	123518372	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ1	10178	broad.mit.edu	37	X	123597697	123597697	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ1	10178	broad.mit.edu	37	X	123680931	123680931	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ2	57451	broad.mit.edu	37	5	166712162	166712162	+	Intron	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ2	57451	broad.mit.edu	37	5	166915080	166915080	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ2	57451	broad.mit.edu	37	5	167377223	167377223	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ2	57451	broad.mit.edu	37	5	167416761	167416761	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ2	57451	broad.mit.edu	37	5	167553739	167553739	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ2	57451	broad.mit.edu	37	5	167673615	167673615	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ3	55714	broad.mit.edu	37	4	183112446	183112446	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ3	55714	broad.mit.edu	37	4	183650187	183650187	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ4	26011	broad.mit.edu	37	11	78369905	78369905	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ4	26011	broad.mit.edu	37	11	78402951	78402951	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ4	26011	broad.mit.edu	37	11	78574057	78574057	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ4	26011	broad.mit.edu	37	11	78712455	78712455	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ4	26011	broad.mit.edu	37	11	79003104	79003104	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OFD1	8481	broad.mit.edu	37	X	13775792	13775792	+	Silent	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OGDHL	55753	broad.mit.edu	37	10	50952077	50952077	+	Silent	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OGDH	4967	broad.mit.edu	37	7	44736068	44736068	+	Silent	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OGT	8473	broad.mit.edu	37	X	70777184	70777184	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OLFML1	283298	broad.mit.edu	37	11	7507195	7507195	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OLFML2B	25903	broad.mit.edu	37	1	161953755	161953755	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OLFML2B	25903	broad.mit.edu	37	1	161976081	161976081	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ONECUT2	9480	broad.mit.edu	37	18	55103907	55103907	+	Nonsense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPCML	4978	broad.mit.edu	37	11	132306119	132306119	+	Silent	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPCML	4978	broad.mit.edu	37	11	133392246	133392246	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPHN1	4983	broad.mit.edu	37	X	67537419	67537419	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPN1LW	5956	broad.mit.edu	37	X	153418611	153418611	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPN1LW	5956	broad.mit.edu	37	X	153421872	153421872	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPN1LW	5956	broad.mit.edu	37	X	153421947	153421947	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPN5	221391	broad.mit.edu	37	6	47791165	47791165	+	Intron	SNP	G	T	T	rs79544859	byFrequency;by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPN5	221391	broad.mit.edu	37	6	47793885	47793885	+	3'UTR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10C1	442194	broad.mit.edu	37	6	29408208	29408208	+	Missense_Mutation	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10Q1	219960	broad.mit.edu	37	11	57995401	57995401	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR11G2	390439	broad.mit.edu	37	14	20665698	20665698	+	Silent	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR13C9	286362	broad.mit.edu	37	9	107380116	107380116	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR14I1	401994	broad.mit.edu	37	1	248844738	248844738	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1L1	26737	broad.mit.edu	37	9	125424391	125424391	+	Missense_Mutation	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1M1	125963	broad.mit.edu	37	19	9204564	9204564	+	Missense_Mutation	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1S2	219958	broad.mit.edu	37	11	57971443	57971443	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2A14	135941	broad.mit.edu	37	7	143826372	143826372	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2AK2	391191	broad.mit.edu	37	1	248128867	248128867	+	Silent	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2AK2	391191	broad.mit.edu	37	1	248128912	248128913	+	Missense_Mutation	DNP	GC	TT	TT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2AK2	391191	broad.mit.edu	37	1	248129452	248129452	+	Silent	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2G6	391211	broad.mit.edu	37	1	248685079	248685079	+	Silent	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2H1	26716	broad.mit.edu	37	6	29430730	29430730	+	3'UTR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2H2	7932	broad.mit.edu	37	6	29555742	29555742	+	Silent	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L13	284521	broad.mit.edu	37	1	248099393	248099393	+	5'Flank	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L13	284521	broad.mit.edu	37	1	248166365	248166365	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L13	284521	broad.mit.edu	37	1	248166367	248166367	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L2	26246	broad.mit.edu	37	1	248202321	248202321	+	Missense_Mutation	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2M5	127059	broad.mit.edu	37	1	248308751	248308751	+	Missense_Mutation	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T12	127064	broad.mit.edu	37	1	248459021	248459021	+	5'Flank	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T33	391195	broad.mit.edu	37	1	248437312	248437312	+	5'Flank	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2W1	26692	broad.mit.edu	37	6	29012467	29012467	+	Silent	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2W3	343171	broad.mit.edu	37	1	248059203	248059203	+	Silent	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2W3	343171	broad.mit.edu	37	1	248059497	248059497	+	Silent	SNP	G	T	T	rs140094589	byFrequency	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4C13	283092	broad.mit.edu	37	11	49974755	49974755	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4C15	81309	broad.mit.edu	37	11	55322043	55322043	+	Nonsense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4C46	119749	broad.mit.edu	37	11	51515606	51515606	+	Nonsense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4D9	390199	broad.mit.edu	37	11	59282863	59282863	+	Missense_Mutation	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4M2	390538	broad.mit.edu	37	15	22368930	22368930	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4N3P	390539	broad.mit.edu	37	15	22413836	22413836	+	Silent	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4N4	283694	broad.mit.edu	37	15	22317853	22317853	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4N4	283694	broad.mit.edu	37	15	22323771	22323771	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4N4	283694	broad.mit.edu	37	15	22325352	22325352	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4N4	283694	broad.mit.edu	37	15	22332626	22332626	+	5'UTR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4N4	283694	broad.mit.edu	37	15	22333702	22333703	+	Intron	INS	-	G	G	rs139048769	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4N4	283694	broad.mit.edu	37	15	22345538	22345538	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4N4	283694	broad.mit.edu	37	15	22371611	22371611	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4N4	283694	broad.mit.edu	37	15	22371656	22371656	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4S2	219431	broad.mit.edu	37	11	55418786	55418786	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51B2	79345	broad.mit.edu	37	11	5344661	5344661	+	Silent	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51B5	282763	broad.mit.edu	37	11	5375409	5375409	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51E2	81285	broad.mit.edu	37	11	4702688	4702688	+	3'UTR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51I2	390064	broad.mit.edu	37	11	5475122	5475122	+	Missense_Mutation	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51T1	401665	broad.mit.edu	37	11	4903203	4903203	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52A1	23538	broad.mit.edu	37	11	5173040	5173040	+	Missense_Mutation	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52E4	390081	broad.mit.edu	37	11	5906234	5906234	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52J3	119679	broad.mit.edu	37	11	5068179	5068179	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52M1	119772	broad.mit.edu	37	11	4567179	4567179	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52R1	119695	broad.mit.edu	37	11	4825034	4825034	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52R1	119695	broad.mit.edu	37	11	4825412	4825412	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR56A1	120796	broad.mit.edu	37	11	6048502	6048502	+	Missense_Mutation	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5A1	219982	broad.mit.edu	37	11	59210886	59210886	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5D18	219438	broad.mit.edu	37	11	55587546	55587546	+	Silent	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5H6	79295	broad.mit.edu	37	3	97983526	97983526	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5I1	10798	broad.mit.edu	37	11	55703457	55703457	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5K4	403278	broad.mit.edu	37	3	98073342	98073342	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5L2	26338	broad.mit.edu	37	11	55595459	55595459	+	Silent	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5M11	219487	broad.mit.edu	37	11	56310241	56310241	+	Frame_Shift_Del	DEL	G	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5M1	390168	broad.mit.edu	37	11	56380351	56380351	+	Missense_Mutation	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5M3	219482	broad.mit.edu	37	11	56237710	56237710	+	Silent	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5R1	219479	broad.mit.edu	37	11	56185018	56185018	+	Missense_Mutation	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6C3	254786	broad.mit.edu	37	12	55726036	55726036	+	Silent	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6V1	346517	broad.mit.edu	37	7	142750145	142750145	+	Silent	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8B2	26595	broad.mit.edu	37	11	124252597	124252597	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8B8	26493	broad.mit.edu	37	11	124310951	124310951	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8I2	120586	broad.mit.edu	37	11	55861152	55861152	+	Nonsense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8I2	120586	broad.mit.edu	37	11	55861616	55861616	+	Missense_Mutation	SNP	C	T	T	rs140206966	byFrequency	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8K1	390157	broad.mit.edu	37	11	56113904	56113904	+	Silent	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ORC2L	4999	broad.mit.edu	37	2	201791391	201791391	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL10	114884	broad.mit.edu	37	3	31743990	31743990	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL8	114882	broad.mit.edu	37	12	76882857	76882857	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL9	114883	broad.mit.edu	37	1	52183204	52183204	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSCAR	126014	broad.mit.edu	37	19	54600290	54600290	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSTF1	26578	broad.mit.edu	37	9	77746655	77746655	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTUD7A	161725	broad.mit.edu	37	15	32048161	32048161	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OVCH1	341350	broad.mit.edu	37	12	29597287	29597287	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OVCH1	341350	broad.mit.edu	37	12	29624996	29624996	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OVCH1	341350	broad.mit.edu	37	12	29640196	29640196	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OVCH2	341277	broad.mit.edu	37	11	7722903	7722903	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OXR1	55074	broad.mit.edu	37	8	107382353	107382353	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P2RX4	5025	broad.mit.edu	37	12	121670268	121670268	+	Silent	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P2RX7	5027	broad.mit.edu	37	12	121605501	121605501	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P2RY4	5030	broad.mit.edu	37	X	69478986	69478986	+	Silent	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PACRGL	133015	broad.mit.edu	37	4	20706533	20706533	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PACRG	135138	broad.mit.edu	37	6	163250822	163250822	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PACRG	135138	broad.mit.edu	37	6	163382516	163382516	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PACS2	23241	broad.mit.edu	37	14	105818725	105818725	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PACSIN1	29993	broad.mit.edu	37	6	34499334	34499334	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PADI3	51702	broad.mit.edu	37	1	17585920	17585920	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PADI3	51702	broad.mit.edu	37	1	17588668	17588668	+	Missense_Mutation	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAFAH2	5051	broad.mit.edu	37	1	26298275	26298275	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAGE1	8712	broad.mit.edu	37	X	49456125	49456125	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAGE2B	389860	broad.mit.edu	37	X	55103864	55103864	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAH	5053	broad.mit.edu	37	12	103243771	103243771	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAIP2B	400961	broad.mit.edu	37	2	71415647	71415647	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAK1IP1	55003	broad.mit.edu	37	6	10709681	10709681	+	Missense_Mutation	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAK3	5063	broad.mit.edu	37	X	110202717	110202717	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAK3	5063	broad.mit.edu	37	X	110214289	110214289	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAK3	5063	broad.mit.edu	37	X	110226378	110226378	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAK3	5063	broad.mit.edu	37	X	110226557	110226557	+	Intron	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAK3	5063	broad.mit.edu	37	X	110245649	110245649	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAK3	5063	broad.mit.edu	37	X	110251647	110251647	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAK3	5063	broad.mit.edu	37	X	110295480	110295480	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAK3	5063	broad.mit.edu	37	X	110296356	110296356	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAK3	5063	broad.mit.edu	37	X	110313409	110313409	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAK3	5063	broad.mit.edu	37	X	110366610	110366610	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAK3	5063	broad.mit.edu	37	X	110437460	110437460	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAK4	10298	broad.mit.edu	37	19	39665645	39665645	+	Silent	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAK7	57144	broad.mit.edu	37	20	9633441	9633441	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAK7	57144	broad.mit.edu	37	20	9785006	9785006	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAMR1	25891	broad.mit.edu	37	11	35462916	35462916	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAN2	9924	broad.mit.edu	37	12	56719270	56719270	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PANX1	24145	broad.mit.edu	37	11	93886946	93886946	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPD4	167153	broad.mit.edu	37	5	78915546	78915546	+	Silent	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPLN	89932	broad.mit.edu	37	14	73725692	73725692	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPLN	89932	broad.mit.edu	37	14	73733364	73733364	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPOLA	10914	broad.mit.edu	37	14	97002134	97002134	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPPA2	60676	broad.mit.edu	37	1	176449939	176449939	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPPA2	60676	broad.mit.edu	37	1	176524942	176524942	+	5'UTR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPPA2	60676	broad.mit.edu	37	1	176525679	176525679	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPPA2	60676	broad.mit.edu	37	1	176661369	176661369	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPPA2	60676	broad.mit.edu	37	1	176734817	176734817	+	Silent	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPPA2	60676	broad.mit.edu	37	1	176790614	176790614	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPPA	5069	broad.mit.edu	37	9	118979210	118979210	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPPA	5069	broad.mit.edu	37	9	118998047	118998047	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPPA	5069	broad.mit.edu	37	9	119065222	119065222	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPPA	5069	broad.mit.edu	37	9	119094059	119094059	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARD3B	117583	broad.mit.edu	37	2	205473624	205473624	+	Intron	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARD3B	117583	broad.mit.edu	37	2	205904799	205904799	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARD3B	117583	broad.mit.edu	37	2	206462563	206462563	+	Intron	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARD3	56288	broad.mit.edu	37	10	34821386	34821386	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARK2	5071	broad.mit.edu	37	6	162628563	162628563	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARK2	5071	broad.mit.edu	37	6	162844442	162844442	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARP12	64761	broad.mit.edu	37	7	139726279	139726279	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARP2	10038	broad.mit.edu	37	14	20824713	20824713	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARP4	143	broad.mit.edu	37	13	25000737	25000737	+	Splice_Site	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PASD1	139135	broad.mit.edu	37	X	150770145	150770145	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAX2	5076	broad.mit.edu	37	10	102526346	102526346	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAX2	5076	broad.mit.edu	37	10	102546500	102546500	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAX2	5076	broad.mit.edu	37	10	102558149	102558149	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAX7	5081	broad.mit.edu	37	1	19062125	19062125	+	Splice_Site	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PBLD	64081	broad.mit.edu	37	10	70052058	70052058	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PBX1	5087	broad.mit.edu	37	1	164815008	164815008	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH11X	27328	broad.mit.edu	37	X	91090669	91090669	+	Missense_Mutation	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH11X	27328	broad.mit.edu	37	X	91132420	91132420	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH11X	27328	broad.mit.edu	37	X	91368385	91368385	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH15	65217	broad.mit.edu	37	10	55890550	55890550	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH15	65217	broad.mit.edu	37	10	55955663	55955663	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH15	65217	broad.mit.edu	37	10	56138714	56138714	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH15	65217	broad.mit.edu	37	10	56215501	56215501	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH15	65217	broad.mit.edu	37	10	56885407	56885407	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH15	65217	broad.mit.edu	37	10	56890008	56890008	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH15	65217	broad.mit.edu	37	10	57203465	57203466	+	Intron	DNP	CC	AA	AA			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH17	27253	broad.mit.edu	37	13	58207450	58207450	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH17	27253	broad.mit.edu	37	13	58208528	58208528	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH18	54510	broad.mit.edu	37	4	138450956	138450956	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH19	57526	broad.mit.edu	37	X	99605492	99605492	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH19	57526	broad.mit.edu	37	X	99632481	99632481	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH7	5099	broad.mit.edu	37	4	30847911	30847911	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH7	5099	broad.mit.edu	37	4	30912485	30912485	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH9	5101	broad.mit.edu	37	13	67591108	67591108	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH9	5101	broad.mit.edu	37	13	67751642	67751642	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH9	5101	broad.mit.edu	37	13	67800923	67800923	+	Silent	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH9	5101	broad.mit.edu	37	13	67801777	67801777	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA1	56147	broad.mit.edu	37	5	140167894	140167894	+	Silent	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA1	56147	broad.mit.edu	37	5	140201326	140201326	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA3	56145	broad.mit.edu	37	5	140182308	140182308	+	Nonsense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB2	56133	broad.mit.edu	37	5	140475971	140475971	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB3	56132	broad.mit.edu	37	5	140481977	140481977	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB4	56131	broad.mit.edu	37	5	140501563	140501563	+	5'Flank	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB4	56131	broad.mit.edu	37	5	140503688	140503688	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB7	56129	broad.mit.edu	37	5	140554119	140554119	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA4	56111	broad.mit.edu	37	5	140736567	140736567	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCGF2	7703	broad.mit.edu	37	17	36895193	36895193	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCLO	27445	broad.mit.edu	37	7	82579192	82579192	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCLO	27445	broad.mit.edu	37	7	82581895	82581895	+	Missense_Mutation	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCLO	27445	broad.mit.edu	37	7	82748268	82748268	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCMTD1	115294	broad.mit.edu	37	8	52758236	52758236	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCNXL2	80003	broad.mit.edu	37	1	233359012	233359012	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCOLCE2	26577	broad.mit.edu	37	3	142537011	142537011	+	3'UTR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCOLCE2	26577	broad.mit.edu	37	3	142539667	142539667	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCOLCE2	26577	broad.mit.edu	37	3	142567202	142567202	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCOLCE	5118	broad.mit.edu	37	7	100199976	100199976	+	5'UTR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCSK1	5122	broad.mit.edu	37	5	95759237	95759237	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCYT1B	9468	broad.mit.edu	37	X	24609799	24609799	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCYT1B	9468	broad.mit.edu	37	X	24664349	24664349	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PC	5091	broad.mit.edu	37	11	66617697	66617697	+	Silent	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDCD1LG2	80380	broad.mit.edu	37	9	5563102	5563102	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDCD4	27250	broad.mit.edu	37	10	112641182	112641182	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDCD4	27250	broad.mit.edu	37	10	112655755	112655755	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDCL2	132954	broad.mit.edu	37	4	56448479	56448479	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDCL3	79031	broad.mit.edu	37	2	101179519	101179519	+	Translation_Start_Site	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE10A	10846	broad.mit.edu	37	6	165807363	165807363	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE10A	10846	broad.mit.edu	37	6	165808693	165808693	+	Frame_Shift_Del	DEL	A	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE10A	10846	broad.mit.edu	37	6	165870073	165870073	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE11A	50940	broad.mit.edu	37	2	178544901	178544901	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE11A	50940	broad.mit.edu	37	2	178592849	178592849	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE11A	50940	broad.mit.edu	37	2	178769978	178769978	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE1A	5136	broad.mit.edu	37	2	183099181	183099181	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE1B	5153	broad.mit.edu	37	12	54948755	54948755	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE2A	5138	broad.mit.edu	37	11	72290462	72290462	+	Intron	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE3B	5140	broad.mit.edu	37	11	14803502	14803502	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4B	5142	broad.mit.edu	37	1	66289030	66289030	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4B	5142	broad.mit.edu	37	1	66346582	66346582	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4B	5142	broad.mit.edu	37	1	66829204	66829204	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144865689	144865689	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144879653	144879653	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144882509	144882509	+	Silent	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	145024189	145024189	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	145034628	145034628	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4D	5144	broad.mit.edu	37	5	58648419	58648419	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4D	5144	broad.mit.edu	37	5	59040432	59040432	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4D	5144	broad.mit.edu	37	5	59616957	59616957	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE6A	5145	broad.mit.edu	37	5	149284813	149284813	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE8B	8622	broad.mit.edu	37	5	76516734	76516734	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE9A	5152	broad.mit.edu	37	21	44188983	44188983	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDGFB	5155	broad.mit.edu	37	22	39631851	39631851	+	Missense_Mutation	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDGFD	80310	broad.mit.edu	37	11	103857490	103857490	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDGFRA	5156	broad.mit.edu	37	4	55144560	55144560	+	Silent	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDHA1	5160	broad.mit.edu	37	X	19372640	19372640	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDHA2	5161	broad.mit.edu	37	4	96762259	96762259	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDIA5	10954	broad.mit.edu	37	3	122868727	122868727	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDILT	204474	broad.mit.edu	37	16	20384206	20384206	+	Missense_Mutation	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDK1	5163	broad.mit.edu	37	2	173451035	173451035	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDLIM1	9124	broad.mit.edu	37	10	97028535	97028535	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDLIM7	9260	broad.mit.edu	37	5	176924623	176924623	+	5'Flank	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDYN	5173	broad.mit.edu	37	20	1961359	1961359	+	Silent	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZD2	23037	broad.mit.edu	37	5	31725590	31725590	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZD2	23037	broad.mit.edu	37	5	31891703	31891703	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZD9	255762	broad.mit.edu	37	16	21996011	21996011	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZK1	5174	broad.mit.edu	37	1	145752463	145752463	+	Nonsense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZRN4	29951	broad.mit.edu	37	12	41953079	41953079	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEAR1	375033	broad.mit.edu	37	1	156873746	156873746	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEG10	23089	broad.mit.edu	37	7	94293271	94293271	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PER1	5187	broad.mit.edu	37	17	8051807	8051808	+	Intron	DNP	CT	AG	AG			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEX26	55670	broad.mit.edu	37	22	18570840	18570840	+	Silent	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEX5L	51555	broad.mit.edu	37	3	179561109	179561109	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEX5L	51555	broad.mit.edu	37	3	179657907	179657907	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PFKFB1	5207	broad.mit.edu	37	X	54972820	54972820	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PFKM	5213	broad.mit.edu	37	12	48509866	48509866	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGBD5	79605	broad.mit.edu	37	1	230459518	230459518	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGBD5	79605	broad.mit.edu	37	1	230468429	230468429	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGCP	10404	broad.mit.edu	37	8	97746490	97746490	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGCP	10404	broad.mit.edu	37	8	98155425	98155425	+	3'UTR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGM5	5239	broad.mit.edu	37	9	71080084	71080084	+	Silent	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHACTR1	221692	broad.mit.edu	37	6	12757458	12757458	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHC1	1911	broad.mit.edu	37	12	9074170	9074170	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHC1	1911	broad.mit.edu	37	12	9082879	9082879	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHEX	5251	broad.mit.edu	37	X	22129321	22129321	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHEX	5251	broad.mit.edu	37	X	22146407	22146407	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHEX	5251	broad.mit.edu	37	X	22186304	22186304	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHF20L1	51105	broad.mit.edu	37	8	133849871	133849871	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHF8	23133	broad.mit.edu	37	X	54029093	54029093	+	Silent	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHKA1	5255	broad.mit.edu	37	X	71873386	71873386	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHKA2	5256	broad.mit.edu	37	X	18912363	18912363	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHKA2	5256	broad.mit.edu	37	X	18944448	18944448	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHLDB1	23187	broad.mit.edu	37	11	118485238	118485238	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PI4KB	5298	broad.mit.edu	37	1	151278899	151278899	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PICALM	8301	broad.mit.edu	37	11	85675631	85675631	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PICALM	8301	broad.mit.edu	37	11	85712197	85712197	+	Missense_Mutation	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIGO	84720	broad.mit.edu	37	9	35093778	35093778	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIH1D2	120379	broad.mit.edu	37	11	111942085	111942085	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3AP1	118788	broad.mit.edu	37	10	98380187	98380187	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3C2B	5287	broad.mit.edu	37	1	204394882	204394882	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3C2G	5288	broad.mit.edu	37	12	18489402	18489402	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3C2G	5288	broad.mit.edu	37	12	18800728	18800728	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3C3	5289	broad.mit.edu	37	18	39629595	39629595	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3CG	5294	broad.mit.edu	37	7	106545619	106545619	+	Silent	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3R6	146850	broad.mit.edu	37	17	8714343	8714343	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIKFYVE	200576	broad.mit.edu	37	2	209141439	209141439	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIKFYVE	200576	broad.mit.edu	37	2	209209900	209209900	+	Missense_Mutation	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIN4	5303	broad.mit.edu	37	X	71409829	71409829	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIN4	5303	broad.mit.edu	37	X	71463675	71463675	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIP5K1P1	206426	broad.mit.edu	37	6	7987167	7987167	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIP5K1P1	206426	broad.mit.edu	37	6	7987849	7987849	+	Silent	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIP	5304	broad.mit.edu	37	7	142836421	142836421	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PITPNM2	57605	broad.mit.edu	37	12	123485673	123485673	+	Nonsense_Mutation	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD2L2	27039	broad.mit.edu	37	5	137259145	137259145	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1L1	93035	broad.mit.edu	37	8	110408292	110408292	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1	5314	broad.mit.edu	37	6	51550650	51550650	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1	5314	broad.mit.edu	37	6	51604637	51604638	+	Intron	DNP	TG	CT	CT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1	5314	broad.mit.edu	37	6	51670862	51670862	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKNOX2	63876	broad.mit.edu	37	11	125202290	125202290	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKNOX2	63876	broad.mit.edu	37	11	125298878	125298878	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKP4	8502	broad.mit.edu	37	2	159405380	159405380	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKP4	8502	broad.mit.edu	37	2	159497028	159497028	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA1A	51365	broad.mit.edu	37	3	119343812	119343812	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2R1	22925	broad.mit.edu	37	2	160840671	160840671	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLAGL1	5325	broad.mit.edu	37	6	144364797	144364797	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLAUR	5329	broad.mit.edu	37	19	44161169	44161169	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLAUR	5329	broad.mit.edu	37	19	44169317	44169317	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLBD2	196463	broad.mit.edu	37	12	113822707	113822707	+	Silent	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCB1	23236	broad.mit.edu	37	20	8189112	8189112	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCB1	23236	broad.mit.edu	37	20	8436466	8436466	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCB4	5332	broad.mit.edu	37	20	9166482	9166482	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCB4	5332	broad.mit.edu	37	20	9284866	9284866	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCB4	5332	broad.mit.edu	37	20	9424527	9424527	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCE1	51196	broad.mit.edu	37	10	95897449	95897449	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCE1	51196	broad.mit.edu	37	10	96012741	96012741	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCG1	5335	broad.mit.edu	37	20	39791046	39791046	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCH1	23007	broad.mit.edu	37	3	155331602	155331603	+	Intron	INS	-	AA	AA	rs143945463	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCL1	5334	broad.mit.edu	37	2	198990592	198990592	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCXD3	345557	broad.mit.edu	37	5	41318565	41318565	+	Intron	SNP	C	A	A	rs114537890	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCXD3	345557	broad.mit.edu	37	5	41383193	41383193	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCZ1	89869	broad.mit.edu	37	12	18846020	18846020	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLD3	23646	broad.mit.edu	37	19	40863852	40863852	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHA7	144100	broad.mit.edu	37	11	16892603	16892603	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHB2	55041	broad.mit.edu	37	2	131935961	131935961	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHO1	51177	broad.mit.edu	37	1	150130956	150130956	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEK	5341	broad.mit.edu	37	2	68608101	68608101	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEK	5341	broad.mit.edu	37	2	68608147	68608147	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEK	5341	broad.mit.edu	37	2	68610778	68610778	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEK	5341	broad.mit.edu	37	2	68622716	68622716	+	Intron	SNP	C	A	A	rs145846537	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEK	5341	broad.mit.edu	37	2	68623007	68623007	+	3'UTR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLK1S1	55857	broad.mit.edu	37	20	21209767	21209767	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLOD3	8985	broad.mit.edu	37	7	100855548	100855548	+	Silent	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLP2	5355	broad.mit.edu	37	X	49028245	49028245	+	5'Flank	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLSCR4	57088	broad.mit.edu	37	3	145918866	145918866	+	Splice_Site	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA1	5361	broad.mit.edu	37	3	126708091	126708091	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA1	5361	broad.mit.edu	37	3	126733989	126733989	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA2	5362	broad.mit.edu	37	1	208310544	208310544	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA3	55558	broad.mit.edu	37	X	153691598	153691598	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA4	91584	broad.mit.edu	37	7	132053146	132053146	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA4	91584	broad.mit.edu	37	7	132075908	132075908	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNC1	10154	broad.mit.edu	37	12	94585778	94585778	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNC1	10154	broad.mit.edu	37	12	94589138	94589138	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNKP	11284	broad.mit.edu	37	19	50369631	50369631	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNLIPRP1	5407	broad.mit.edu	37	10	118359630	118359630	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNLIPRP3	119548	broad.mit.edu	37	10	118215230	118215230	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNLIPRP3	119548	broad.mit.edu	37	10	118220564	118220564	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POC5	134359	broad.mit.edu	37	5	74970315	74970315	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POF1B	79983	broad.mit.edu	37	X	84586017	84586017	+	Silent	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POF1B	79983	broad.mit.edu	37	X	84617979	84617979	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLA1	5422	broad.mit.edu	37	X	24759680	24759680	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLA1	5422	broad.mit.edu	37	X	24948463	24948463	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLE	5426	broad.mit.edu	37	12	133202289	133202289	+	Missense_Mutation	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLE	5426	broad.mit.edu	37	12	133241174	133241174	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POM121L12	285877	broad.mit.edu	37	7	53103577	53103577	+	Silent	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POM121L12	285877	broad.mit.edu	37	7	53104089	53104089	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POPDC2	64091	broad.mit.edu	37	3	119373496	119373496	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POSTN	10631	broad.mit.edu	37	13	38172838	38172838	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POTEF	728378	broad.mit.edu	37	2	130877974	130877974	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POTEH	23784	broad.mit.edu	37	22	16287437	16287437	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POTEH	23784	broad.mit.edu	37	22	16287674	16287674	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POU2F3	25833	broad.mit.edu	37	11	120131113	120131113	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POU3F4	5456	broad.mit.edu	37	X	82763695	82763695	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POU4F1	5457	broad.mit.edu	37	13	79175840	79175840	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POU4F2	5458	broad.mit.edu	37	4	147561327	147561327	+	Silent	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POU6F2	11281	broad.mit.edu	37	7	39411055	39411055	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POU6F2	11281	broad.mit.edu	37	7	39503862	39503862	+	Silent	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPAPDC1A	196051	broad.mit.edu	37	10	122288184	122288184	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPAPDC3	84814	broad.mit.edu	37	9	134183499	134183499	+	Missense_Mutation	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPARG	5468	broad.mit.edu	37	3	12369711	12369711	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPARG	5468	broad.mit.edu	37	3	12458213	12458213	+	Missense_Mutation	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPEF1	5475	broad.mit.edu	37	X	18797363	18797363	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPFIA4	8497	broad.mit.edu	37	1	203043277	203043277	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPFIBP1	8496	broad.mit.edu	37	12	27788039	27788039	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPFIBP1	8496	broad.mit.edu	37	12	27803204	27803204	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPHLN1	51535	broad.mit.edu	37	12	42681187	42681187	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPHLN1	51535	broad.mit.edu	37	12	42778772	42778772	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPM1L	151742	broad.mit.edu	37	3	160560097	160560097	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPM1L	151742	broad.mit.edu	37	3	160598627	160598627	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPM1L	151742	broad.mit.edu	37	3	160631260	160631260	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPM1L	151742	broad.mit.edu	37	3	160714061	160714061	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPM1L	151742	broad.mit.edu	37	3	160747068	160747068	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPM1L	151742	broad.mit.edu	37	3	160786769	160786769	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R3A	5506	broad.mit.edu	37	7	113518146	113518146	+	Nonsense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R1A	5518	broad.mit.edu	37	19	52709088	52709088	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R1A	5518	broad.mit.edu	37	19	52712022	52712022	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R2B	5521	broad.mit.edu	37	5	146030291	146030291	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R2B	5521	broad.mit.edu	37	5	146053336	146053336	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R2B	5521	broad.mit.edu	37	5	146071441	146071441	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R2B	5521	broad.mit.edu	37	5	146146797	146146797	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R2B	5521	broad.mit.edu	37	5	146184011	146184011	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R2B	5521	broad.mit.edu	37	5	146431115	146431115	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R2C	5522	broad.mit.edu	37	4	6330937	6330937	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R2C	5522	broad.mit.edu	37	4	6377357	6377357	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R2C	5522	broad.mit.edu	37	4	6377597	6377597	+	Silent	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R5A	5525	broad.mit.edu	37	1	212534110	212534110	+	Frame_Shift_Del	DEL	T	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP4R2	151987	broad.mit.edu	37	3	73096425	73096425	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP4R2	151987	broad.mit.edu	37	3	73113183	73113183	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP4R4	57718	broad.mit.edu	37	14	94665973	94665973	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRCD	768206	broad.mit.edu	37	17	74538504	74538504	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM11	56981	broad.mit.edu	37	11	45117410	45117410	+	Silent	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM16	63976	broad.mit.edu	37	1	3348615	3348615	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM9	56979	broad.mit.edu	37	5	23523168	23523168	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM9	56979	broad.mit.edu	37	5	23524340	23524340	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRELP	5549	broad.mit.edu	37	1	203455829	203455829	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PREP	5550	broad.mit.edu	37	6	105736529	105736529	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PREX1	57580	broad.mit.edu	37	20	47268150	47268150	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PREX1	57580	broad.mit.edu	37	20	47270134	47270134	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PREX1	57580	broad.mit.edu	37	20	47309363	47309363	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PREX1	57580	broad.mit.edu	37	20	47346134	47346134	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PREX2	80243	broad.mit.edu	37	8	69002967	69002967	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PREX2	80243	broad.mit.edu	37	8	69095552	69095552	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRG2	5553	broad.mit.edu	37	11	57155006	57155006	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRH1	5554	broad.mit.edu	37	12	11035042	11035042	+	Frame_Shift_Del	DEL	C	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRH1	5554	broad.mit.edu	37	12	11036788	11036788	+	Missense_Mutation	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRH2	5555	broad.mit.edu	37	12	11083451	11083451	+	Frame_Shift_Del	DEL	G	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRIM2	5558	broad.mit.edu	37	6	57512374	57512374	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRIMA1	145270	broad.mit.edu	37	14	94227766	94227766	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKAA2	5563	broad.mit.edu	37	1	57139961	57139961	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKCB	5579	broad.mit.edu	37	16	23969383	23969383	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKCB	5579	broad.mit.edu	37	16	24124200	24124200	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKCB	5579	broad.mit.edu	37	16	24212062	24212062	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKCE	5581	broad.mit.edu	37	2	46075912	46075912	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKCE	5581	broad.mit.edu	37	2	46098940	46098940	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKCE	5581	broad.mit.edu	37	2	46246077	46246077	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKCI	5584	broad.mit.edu	37	3	169953299	169953299	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKCI	5584	broad.mit.edu	37	3	170002268	170002268	+	Missense_Mutation	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKCQ	5588	broad.mit.edu	37	10	6592607	6592607	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKD3	23683	broad.mit.edu	37	2	37496827	37496827	+	Missense_Mutation	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKDC	5591	broad.mit.edu	37	8	48713330	48713330	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKG1	5592	broad.mit.edu	37	10	53200611	53200611	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKG1	5592	broad.mit.edu	37	10	53723655	53723655	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRLHR	2834	broad.mit.edu	37	10	120353677	120353678	+	Frame_Shift_Ins	INS	-	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRLR	5618	broad.mit.edu	37	5	35092455	35092455	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PROC	5624	broad.mit.edu	37	2	128186270	128186270	+	Silent	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PROX2	283571	broad.mit.edu	37	14	75333133	75333133	+	5'Flank	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRPF40A	55660	broad.mit.edu	37	2	153572544	153572545	+	Missense_Mutation	DNP	TC	AA	AA			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRR16	51334	broad.mit.edu	37	5	119970401	119970401	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRRG1	5638	broad.mit.edu	37	X	37265416	37265416	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRRX2	51450	broad.mit.edu	37	9	132484547	132484547	+	Silent	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRSS23	11098	broad.mit.edu	37	11	86533798	86533798	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRSS23	11098	broad.mit.edu	37	11	86568132	86568132	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRSS38	339501	broad.mit.edu	37	1	228004852	228004852	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRSS53	339105	broad.mit.edu	37	16	31096568	31096568	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSD3	23362	broad.mit.edu	37	8	18551468	18551468	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSD4	23550	broad.mit.edu	37	2	113951400	113951400	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG1	5669	broad.mit.edu	37	19	43359903	43359903	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG1	5669	broad.mit.edu	37	19	43362240	43362240	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG1	5669	broad.mit.edu	37	19	43383224	43383224	+	Intron	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG1	5669	broad.mit.edu	37	19	43383545	43383545	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG6	5675	broad.mit.edu	37	19	43519727	43519727	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG6	5675	broad.mit.edu	37	19	43571276	43571276	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG6	5675	broad.mit.edu	37	19	43601001	43601001	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG8	440533	broad.mit.edu	37	19	43310255	43310255	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMD11	5717	broad.mit.edu	37	17	30807572	30807572	+	Nonsense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMD14	10213	broad.mit.edu	37	2	162258003	162258003	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMD3	5709	broad.mit.edu	37	17	38137775	38137775	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSTPIP2	9050	broad.mit.edu	37	18	43616660	43616660	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTCD1	26024	broad.mit.edu	37	7	99058103	99058103	+	Intron	SNP	T	C	C	rs73711284	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTCHD1	139411	broad.mit.edu	37	X	23353297	23353297	+	Missense_Mutation	SNP	A	T	T	rs138264321		TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTENP1	11191	broad.mit.edu	37	9	33676092	33676092	+	Silent	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTEN	5728	broad.mit.edu	37	10	89720851	89720851	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTER	9317	broad.mit.edu	37	10	16528292	16528293	+	Intron	DNP	GG	AT	AT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTGER3	5733	broad.mit.edu	37	1	71331519	71331519	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTGER3	5733	broad.mit.edu	37	1	71440183	71440183	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTGER3	5733	broad.mit.edu	37	1	71478259	71478259	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTGIS	5740	broad.mit.edu	37	20	48127626	48127626	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTH2R	5746	broad.mit.edu	37	2	209302174	209302174	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTK2	5747	broad.mit.edu	37	8	141851093	141851093	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN13	5783	broad.mit.edu	37	4	87703391	87703391	+	Silent	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN4	5775	broad.mit.edu	37	2	120567726	120567726	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN5	84867	broad.mit.edu	37	11	18762430	18762430	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRB	5787	broad.mit.edu	37	12	70938257	70938257	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRB	5787	broad.mit.edu	37	12	70970307	70970307	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRC	5788	broad.mit.edu	37	1	198687625	198687625	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	10155375	10155375	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	10554942	10554942	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	8317810	8317810	+	3'UTR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	8395558	8395558	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	8465578	8465578	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	8484291	8484291	+	Missense_Mutation	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	8493144	8493144	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	8517911	8517911	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	8525182	8525182	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	8636689	8636689	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	8951384	8951384	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	9196947	9196947	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	9262924	9262924	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	9369534	9369534	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	9889817	9889817	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	9913714	9913714	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	9918773	9918773	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRF	5792	broad.mit.edu	37	1	44069259	44069259	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRH	5794	broad.mit.edu	37	19	55713710	55713710	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRK	5796	broad.mit.edu	37	6	128718590	128718590	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRM	5797	broad.mit.edu	37	18	7712977	7712977	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRN2	5799	broad.mit.edu	37	7	157907563	157907563	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRN2	5799	broad.mit.edu	37	7	158038115	158038115	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRN	5798	broad.mit.edu	37	2	220162805	220162805	+	Silent	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRN	5798	broad.mit.edu	37	2	220162839	220162839	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRN	5798	broad.mit.edu	37	2	220167629	220167629	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRN	5798	broad.mit.edu	37	2	220168430	220168430	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRR	5801	broad.mit.edu	37	12	71056431	71056431	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRR	5801	broad.mit.edu	37	12	71191690	71191690	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRR	5801	broad.mit.edu	37	12	71213050	71213050	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRT	11122	broad.mit.edu	37	20	40838758	40838758	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRT	11122	broad.mit.edu	37	20	41407549	41407549	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRT	11122	broad.mit.edu	37	20	41680948	41680948	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRT	11122	broad.mit.edu	37	20	41741182	41741182	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRZ1	5803	broad.mit.edu	37	7	121548830	121548830	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRZ1	5803	broad.mit.edu	37	7	121659297	121659297	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRZ1	5803	broad.mit.edu	37	7	121679453	121679453	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRZ1	5803	broad.mit.edu	37	7	121682766	121682766	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRZ1	5803	broad.mit.edu	37	7	121691543	121691543	+	Frame_Shift_Del	DEL	G	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PWWP2B	170394	broad.mit.edu	37	10	134230548	134230548	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PXDNL	137902	broad.mit.edu	37	8	52258450	52258450	+	Nonsense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PXDNL	137902	broad.mit.edu	37	8	52433092	52433092	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PXDNL	137902	broad.mit.edu	37	8	52438836	52438837	+	Intron	DNP	GC	AA	AA			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PXDN	7837	broad.mit.edu	37	2	1677191	1677191	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PYGL	5836	broad.mit.edu	37	14	51376465	51376465	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PYHIN1	149628	broad.mit.edu	37	1	158906733	158906733	+	Silent	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PZP	5858	broad.mit.edu	37	12	9302230	9302230	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PZP	5858	broad.mit.edu	37	12	9304978	9304978	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PZP	5858	broad.mit.edu	37	12	9316561	9316561	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
QDPR	5860	broad.mit.edu	37	4	17510895	17510895	+	Missense_Mutation	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
QPRT	23475	broad.mit.edu	37	16	29706293	29706293	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
QRFPR	84109	broad.mit.edu	37	4	122251665	122251665	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
QRICH1	54870	broad.mit.edu	37	3	49095211	49095211	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
R3HDM1	23518	broad.mit.edu	37	2	136393668	136393668	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
R3HDM1	23518	broad.mit.edu	37	2	136393711	136393711	+	Silent	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB19	401409	broad.mit.edu	37	7	140110929	140110929	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB27B	5874	broad.mit.edu	37	18	52548898	52548898	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB28	9364	broad.mit.edu	37	4	13383066	13383066	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB31	11031	broad.mit.edu	37	18	9842272	9842272	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB36	9609	broad.mit.edu	37	22	23488968	23488968	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB39B	116442	broad.mit.edu	37	X	154489808	154489808	+	3'UTR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB3B	5865	broad.mit.edu	37	1	52398829	52398829	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB3C	115827	broad.mit.edu	37	5	58126224	58126225	+	Intron	DNP	GG	TT	TT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB4A	5867	broad.mit.edu	37	1	229424455	229424455	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB4A	5867	broad.mit.edu	37	1	229439419	229439419	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB5C	5878	broad.mit.edu	37	17	40283203	40283203	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB6B	51560	broad.mit.edu	37	3	133558307	133558307	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB9BP1	9366	broad.mit.edu	37	5	104434952	104434953	+	5'Flank	DNP	CG	GC	GC			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB9B	51209	broad.mit.edu	37	X	103068155	103068155	+	Intron	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RABGAP1L	9910	broad.mit.edu	37	1	174593864	174593864	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RABGAP1L	9910	broad.mit.edu	37	1	174616586	174616586	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RACGAP1	29127	broad.mit.edu	37	12	50390783	50390784	+	Intron	DEL	AA	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAD51AP1	10635	broad.mit.edu	37	12	4655170	4655170	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAD51L1	5890	broad.mit.edu	37	14	68739955	68739955	+	Intron	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAD51L1	5890	broad.mit.edu	37	14	68837898	68837898	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAD51L1	5890	broad.mit.edu	37	14	68841569	68841569	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAD51L1	5890	broad.mit.edu	37	14	68841906	68841906	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RALGPS1	9649	broad.mit.edu	37	9	129819367	129819367	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RALGPS1	9649	broad.mit.edu	37	9	129853180	129853180	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RALYL	138046	broad.mit.edu	37	8	85731311	85731311	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAMP2	10266	broad.mit.edu	37	17	40914582	40914582	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RANBP17	64901	broad.mit.edu	37	5	170678789	170678789	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RANBP3L	202151	broad.mit.edu	37	5	36269349	36269349	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RANBP3L	202151	broad.mit.edu	37	5	36270228	36270228	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAP1A	5906	broad.mit.edu	37	1	112191257	112191257	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAP1GAP2	23108	broad.mit.edu	37	17	2868963	2868963	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAP1GAP	5909	broad.mit.edu	37	1	21924210	21924210	+	3'UTR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAPGEF5	9771	broad.mit.edu	37	7	22233810	22233810	+	5'Flank	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RARB	5915	broad.mit.edu	37	3	25246002	25246002	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RARB	5915	broad.mit.edu	37	3	25578292	25578292	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RARB	5915	broad.mit.edu	37	3	25602716	25602716	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RARB	5915	broad.mit.edu	37	3	25637962	25637962	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASAL2	9462	broad.mit.edu	37	1	178163661	178163662	+	Intron	DNP	GG	TT	TT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASEF	158158	broad.mit.edu	37	9	85605391	85605391	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASGEF1C	255426	broad.mit.edu	37	5	179546459	179546459	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASGRF2	5924	broad.mit.edu	37	5	80289787	80289787	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASGRF2	5924	broad.mit.edu	37	5	80381625	80381625	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASGRP3	25780	broad.mit.edu	37	2	33733029	33733030	+	Intron	DNP	AG	TT	TT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASGRP3	25780	broad.mit.edu	37	2	33745848	33745848	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASGRP4	115727	broad.mit.edu	37	19	38911481	38911481	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RB1	5925	broad.mit.edu	37	13	48956147	48956147	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBBP5	5929	broad.mit.edu	37	1	205066366	205066366	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBL2	5934	broad.mit.edu	37	16	53524047	53524047	+	Silent	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM28	55131	broad.mit.edu	37	7	127973497	127973497	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM47	54502	broad.mit.edu	37	4	40440684	40440684	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM9	23543	broad.mit.edu	37	22	36279435	36279435	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBPJL	11317	broad.mit.edu	37	20	43941996	43941996	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBPJL	11317	broad.mit.edu	37	20	43942153	43942153	+	Missense_Mutation	SNP	G	T	T	rs146643791		TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBPJ	3516	broad.mit.edu	37	4	26400297	26400297	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBPJ	3516	broad.mit.edu	37	4	26432487	26432487	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RC3H1	149041	broad.mit.edu	37	1	173921288	173921288	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RCHY1	25898	broad.mit.edu	37	4	76415855	76415855	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RCN1	5954	broad.mit.edu	37	11	31896150	31896150	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RECK	8434	broad.mit.edu	37	9	36105139	36105139	+	Splice_Site	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REG1P	5969	broad.mit.edu	37	2	79364477	79364477	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RELN	5649	broad.mit.edu	37	7	103230224	103230224	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RELN	5649	broad.mit.edu	37	7	103251085	103251085	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RELN	5649	broad.mit.edu	37	7	103292412	103292412	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RELN	5649	broad.mit.edu	37	7	103383713	103383713	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RELN	5649	broad.mit.edu	37	7	103389733	103389733	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RELN	5649	broad.mit.edu	37	7	103488947	103488947	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REL	5966	broad.mit.edu	37	2	61128171	61128171	+	Missense_Mutation	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REPS1	85021	broad.mit.edu	37	6	139233926	139233926	+	Silent	SNP	G	A	A	rs140617448		TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RER1	11079	broad.mit.edu	37	1	2328561	2328561	+	Nonsense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RERE	473	broad.mit.edu	37	1	8674868	8674868	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RETSAT	54884	broad.mit.edu	37	2	85570899	85570899	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFTN2	130132	broad.mit.edu	37	2	198460720	198460720	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFX3	5991	broad.mit.edu	37	9	3228777	3228777	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFX4	5992	broad.mit.edu	37	12	107002541	107002541	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFX4	5992	broad.mit.edu	37	12	107071411	107071411	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFX4	5992	broad.mit.edu	37	12	107075848	107075848	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGL1	23179	broad.mit.edu	37	1	183836625	183836625	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGL1	23179	broad.mit.edu	37	1	183853077	183853077	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGNEF	64283	broad.mit.edu	37	5	73155442	73155442	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS18	64407	broad.mit.edu	37	1	192153462	192153462	+	Silent	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS5	8490	broad.mit.edu	37	1	163122206	163122206	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS6	9628	broad.mit.edu	37	14	72541357	72541357	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS7BP	401190	broad.mit.edu	37	5	63840522	63840522	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS7	6000	broad.mit.edu	37	1	240934326	240934326	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS7	6000	broad.mit.edu	37	1	240990496	240990496	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS7	6000	broad.mit.edu	37	1	241249265	241249265	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGSL1	353299	broad.mit.edu	37	1	182443128	182443129	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHBDD1	84236	broad.mit.edu	37	2	227819887	227819887	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHBDL3	162494	broad.mit.edu	37	17	30632417	30632417	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHOJ	57381	broad.mit.edu	37	14	63712785	63712785	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHOJ	57381	broad.mit.edu	37	14	63724400	63724400	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHOT1	55288	broad.mit.edu	37	17	30538198	30538198	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHPN2	85415	broad.mit.edu	37	19	33503470	33503470	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHPN2	85415	broad.mit.edu	37	19	33535116	33535116	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIBC1	158787	broad.mit.edu	37	X	53456805	53456805	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIC3	79608	broad.mit.edu	37	11	8158779	8158779	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RICH2	9912	broad.mit.edu	37	17	12757516	12757516	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMBP2	23504	broad.mit.edu	37	12	130963622	130963622	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMBP3C	150221	broad.mit.edu	37	22	21742777	21742777	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS2	9699	broad.mit.edu	37	8	104764621	104764621	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS2	9699	broad.mit.edu	37	8	104959731	104959731	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS2	9699	broad.mit.edu	37	8	105260458	105260458	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS4	140730	broad.mit.edu	37	20	43394307	43394307	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIT2	6014	broad.mit.edu	37	18	40572320	40572320	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RMND5A	64795	broad.mit.edu	37	2	87056588	87056588	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RMST	196475	broad.mit.edu	37	12	97872354	97872354	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RMST	196475	broad.mit.edu	37	12	97951099	97951099	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNASE3	6037	broad.mit.edu	37	14	21359610	21359610	+	5'UTR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNASEH2B	79621	broad.mit.edu	37	13	51501614	51501614	+	Nonsense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNASEL	6041	broad.mit.edu	37	1	182555602	182555602	+	Missense_Mutation	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF128	79589	broad.mit.edu	37	X	105937328	105937328	+	Frame_Shift_Del	DEL	G	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF182	221687	broad.mit.edu	37	6	13977247	13977247	+	5'UTR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF214	257160	broad.mit.edu	37	11	117109212	117109212	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF214	257160	broad.mit.edu	37	11	117109467	117109468	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF216	54476	broad.mit.edu	37	7	5675877	5675877	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF25	64320	broad.mit.edu	37	2	219529630	219529630	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF31	55072	broad.mit.edu	37	14	24629542	24629542	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF4	6047	broad.mit.edu	37	4	2515395	2515395	+	Splice_Site	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNGTT	8732	broad.mit.edu	37	6	89479548	89479548	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNMTL1	55178	broad.mit.edu	37	17	685883	685883	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROBO1	6091	broad.mit.edu	37	3	79293191	79293191	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROBO1	6091	broad.mit.edu	37	3	79384756	79384756	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROBO2	6092	broad.mit.edu	37	3	77542422	77542422	+	Missense_Mutation	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROBO2	6092	broad.mit.edu	37	3	77623727	77623727	+	Silent	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROBO2	6092	broad.mit.edu	37	3	77651201	77651201	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROBO2	6092	broad.mit.edu	37	3	77666736	77666736	+	Silent	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROBO2	6092	broad.mit.edu	37	3	77683990	77683990	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROR2	4920	broad.mit.edu	37	9	94426305	94426305	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RORA	6095	broad.mit.edu	37	15	60803725	60803725	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RORA	6095	broad.mit.edu	37	15	60948265	60948265	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROS1	6098	broad.mit.edu	37	6	117708171	117708171	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RP1L1	94137	broad.mit.edu	37	8	10465673	10465673	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RP1L1	94137	broad.mit.edu	37	8	10467204	10467204	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RP9	6100	broad.mit.edu	37	7	33136018	33136018	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPH3A	22895	broad.mit.edu	37	12	113285674	113285674	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPL13AP3	645683	broad.mit.edu	37	14	56233135	56233135	+	RNA	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPL31P11	641311	broad.mit.edu	37	1	161655029	161655029	+	RNA	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPL3L	6123	broad.mit.edu	37	16	2001034	2001034	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPP40	10799	broad.mit.edu	37	6	5000982	5000982	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPRD1B	58490	broad.mit.edu	37	20	36676823	36676823	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPS6KB1	6198	broad.mit.edu	37	17	58024239	58024239	+	3'UTR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPTOR	57521	broad.mit.edu	37	17	78831510	78831510	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RRH	10692	broad.mit.edu	37	4	110754370	110754370	+	Missense_Mutation	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RRP12	23223	broad.mit.edu	37	10	99161075	99161075	+	5'UTR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RRP1B	23076	broad.mit.edu	37	21	45107289	45107289	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSBN1L	222194	broad.mit.edu	37	7	77398052	77398052	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSF1	51773	broad.mit.edu	37	11	77524757	77524757	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSPO1	284654	broad.mit.edu	37	1	38090056	38090056	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSRC1	51319	broad.mit.edu	37	3	158092708	158092708	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTN1	6252	broad.mit.edu	37	14	60298192	60298192	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUNDC2A	84127	broad.mit.edu	37	16	12140140	12140140	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUNDC3B	154661	broad.mit.edu	37	7	87370884	87370884	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUNDC3B	154661	broad.mit.edu	37	7	87445641	87445641	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUNX1T1	862	broad.mit.edu	37	8	92972768	92972768	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUNX1T1	862	broad.mit.edu	37	8	93017350	93017350	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUNX2	860	broad.mit.edu	37	6	45454355	45454355	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RXRG	6258	broad.mit.edu	37	1	165374873	165374873	+	Intron	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR1	6261	broad.mit.edu	37	19	38993141	38993141	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR1	6261	broad.mit.edu	37	19	38995653	38995653	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR1	6261	broad.mit.edu	37	19	39013886	39013886	+	Silent	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237390212	237390212	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237670075	237670075	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237675162	237675162	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237741473	237741473	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237766466	237766466	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237770982	237770982	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237780952	237780952	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237796814	237796814	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237806495	237806495	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237947501	237947501	+	Silent	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237993894	237993894	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR3	6263	broad.mit.edu	37	15	33673227	33673227	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR3	6263	broad.mit.edu	37	15	33945072	33945072	+	Silent	SNP	C	A	A	rs61749016		TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR3	6263	broad.mit.edu	37	15	33961613	33961613	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR3	6263	broad.mit.edu	37	15	33962620	33962620	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR3	6263	broad.mit.edu	37	15	34018521	34018521	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR3	6263	broad.mit.edu	37	15	34030922	34030922	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR3	6263	broad.mit.edu	37	15	34038351	34038351	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
S100A7A	338324	broad.mit.edu	37	1	153390471	153390472	+	Intron	DNP	CC	AA	AA			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
S100A7L2	645922	broad.mit.edu	37	1	153411414	153411414	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAGE1	55511	broad.mit.edu	37	X	134975685	134975685	+	5'Flank	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAGE1	55511	broad.mit.edu	37	X	134990452	134990452	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SALL1	6299	broad.mit.edu	37	16	51175296	51175296	+	Silent	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMD12	401474	broad.mit.edu	37	8	119278459	119278459	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMD12	401474	broad.mit.edu	37	8	119545433	119545433	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMD4A	23034	broad.mit.edu	37	14	55104701	55104701	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAP130	79595	broad.mit.edu	37	2	128747113	128747113	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCAI	286205	broad.mit.edu	37	9	127733894	127733894	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCFD1	23256	broad.mit.edu	37	14	31103313	31103313	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCFD2	152579	broad.mit.edu	37	4	53745032	53745032	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCG2	7857	broad.mit.edu	37	2	224464089	224464089	+	Intron	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCHIP1	29970	broad.mit.edu	37	3	159164889	159164889	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCHIP1	29970	broad.mit.edu	37	3	159289070	159289070	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCIN	85477	broad.mit.edu	37	7	12631984	12631984	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCML2	10389	broad.mit.edu	37	X	18265065	18265065	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCML4	256380	broad.mit.edu	37	6	108041816	108041816	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN10A	6336	broad.mit.edu	37	3	38763741	38763741	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN11A	11280	broad.mit.edu	37	3	38945445	38945445	+	Missense_Mutation	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN1A	6323	broad.mit.edu	37	2	166850735	166850735	+	Silent	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN1B	6324	broad.mit.edu	37	19	35523499	35523499	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN2A	6326	broad.mit.edu	37	2	166166888	166166888	+	Silent	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN2A	6326	broad.mit.edu	37	2	166179875	166179875	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN2A	6326	broad.mit.edu	37	2	166245669	166245669	+	Nonsense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN5A	6331	broad.mit.edu	37	3	38592978	38592978	+	Silent	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN7A	6332	broad.mit.edu	37	2	167330312	167330312	+	Nonsense_Mutation	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCNM1	79005	broad.mit.edu	37	1	151140399	151140399	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCPEP1	59342	broad.mit.edu	37	17	55062582	55062582	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDC2	6383	broad.mit.edu	37	8	97614353	97614353	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDCBP2	27111	broad.mit.edu	37	20	1290951	1290951	+	3'UTR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDF2	6388	broad.mit.edu	37	17	26988675	26988675	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDK1	221935	broad.mit.edu	37	7	3490775	3490775	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDK1	221935	broad.mit.edu	37	7	3638166	3638166	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDK2	54549	broad.mit.edu	37	17	71574829	71574829	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDR16C5	195814	broad.mit.edu	37	8	57228789	57228789	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDR9C7	121214	broad.mit.edu	37	12	57327883	57327883	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC16B	89866	broad.mit.edu	37	1	177913917	177913917	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC22A	26984	broad.mit.edu	37	3	122959691	122959691	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC24B	10427	broad.mit.edu	37	4	110370769	110370769	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC24D	9871	broad.mit.edu	37	4	119659576	119659576	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SECISBP2L	9728	broad.mit.edu	37	15	49296924	49296924	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SELP	6403	broad.mit.edu	37	1	169558606	169558606	+	3'UTR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SELP	6403	broad.mit.edu	37	1	169580662	169580662	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA3D	223117	broad.mit.edu	37	7	84628850	84628850	+	Frame_Shift_Del	DEL	C	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA3D	223117	broad.mit.edu	37	7	84671400	84671400	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA3D	223117	broad.mit.edu	37	7	84727060	84727060	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA5A	9037	broad.mit.edu	37	5	9280606	9280606	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA5A	9037	broad.mit.edu	37	5	9318535	9318535	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA5A	9037	broad.mit.edu	37	5	9408197	9408197	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA5A	9037	broad.mit.edu	37	5	9444011	9444011	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA5B	54437	broad.mit.edu	37	3	122629027	122629027	+	Missense_Mutation	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA6A	57556	broad.mit.edu	37	5	115815594	115815594	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA6A	57556	broad.mit.edu	37	5	115823880	115823880	+	Missense_Mutation	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA6A	57556	broad.mit.edu	37	5	115824042	115824042	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA6A	57556	broad.mit.edu	37	5	115898690	115898690	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA6D	80031	broad.mit.edu	37	15	47778996	47778996	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SENP5	205564	broad.mit.edu	37	3	196613016	196613016	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SENP5	205564	broad.mit.edu	37	3	196626786	196626786	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SENP7	57337	broad.mit.edu	37	3	101046534	101046534	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SENP7	57337	broad.mit.edu	37	3	101076390	101076390	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINA12	145264	broad.mit.edu	37	14	94961950	94961950	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINA5	5104	broad.mit.edu	37	14	95056465	95056465	+	Missense_Mutation	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINA9	327657	broad.mit.edu	37	14	94940514	94940514	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINE2	5270	broad.mit.edu	37	2	224847442	224847442	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINH1	871	broad.mit.edu	37	11	75283547	75283547	+	3'UTR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETBP1	26040	broad.mit.edu	37	18	42313902	42313902	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETBP1	26040	broad.mit.edu	37	18	42390263	42390263	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETBP1	26040	broad.mit.edu	37	18	42643106	42643106	+	Silent	SNP	C	A	A	rs145996171	byFrequency	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETD2	29072	broad.mit.edu	37	3	47084172	47084172	+	Missense_Mutation	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETDB1	9869	broad.mit.edu	37	1	150914936	150914936	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETDB1	9869	broad.mit.edu	37	1	150923357	150923357	+	Silent	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETX	23064	broad.mit.edu	37	9	135139986	135139986	+	Silent	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETX	23064	broad.mit.edu	37	9	135175952	135175952	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEZ6L	23544	broad.mit.edu	37	22	26708048	26708048	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFMBT2	57713	broad.mit.edu	37	10	7239435	7239435	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFMBT2	57713	broad.mit.edu	37	10	7242325	7242325	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFMBT2	57713	broad.mit.edu	37	10	7372812	7372812	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFRS2IP	9169	broad.mit.edu	37	12	46316032	46316032	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFXN4	119559	broad.mit.edu	37	10	120900553	120900553	+	3'UTR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGCD	6444	broad.mit.edu	37	5	155407980	155407980	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGCD	6444	broad.mit.edu	37	5	155571122	155571122	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGCD	6444	broad.mit.edu	37	5	155998091	155998091	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGCZ	137868	broad.mit.edu	37	8	14157929	14157929	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGCZ	137868	broad.mit.edu	37	8	14167209	14167209	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGIP1	84251	broad.mit.edu	37	1	67124545	67124545	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGIP1	84251	broad.mit.edu	37	1	67153131	67153131	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGIP1	84251	broad.mit.edu	37	1	67185075	67185075	+	Frame_Shift_Del	DEL	G	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGIP1	84251	broad.mit.edu	37	1	67196097	67196097	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGTA	6449	broad.mit.edu	37	19	2757423	2757423	+	Missense_Mutation	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH2D1A	4068	broad.mit.edu	37	X	123496226	123496226	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH2D4A	63898	broad.mit.edu	37	8	19221630	19221630	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH2D4B	387694	broad.mit.edu	37	10	82330201	82330201	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH2D4B	387694	broad.mit.edu	37	10	82331308	82331308	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3GL2	6456	broad.mit.edu	37	9	17619533	17619533	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3GL2	6456	broad.mit.edu	37	9	17738076	17738076	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3GL2	6456	broad.mit.edu	37	9	17778907	17778907	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3GL2	6456	broad.mit.edu	37	9	17779173	17779173	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3GLB1	51100	broad.mit.edu	37	1	87212179	87212179	+	3'UTR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3KBP1	30011	broad.mit.edu	37	X	19563889	19563889	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3KBP1	30011	broad.mit.edu	37	X	19816686	19816686	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3KBP1	30011	broad.mit.edu	37	X	19817751	19817751	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3RF3	344558	broad.mit.edu	37	2	109867961	109867961	+	Intron	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3RF3	344558	broad.mit.edu	37	2	110057158	110057158	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3TC2	79628	broad.mit.edu	37	5	148290497	148290497	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHANK2	22941	broad.mit.edu	37	11	70507701	70507701	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHBG	6462	broad.mit.edu	37	17	7530221	7530221	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHC3	53358	broad.mit.edu	37	9	91654538	91654538	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHH	6469	broad.mit.edu	37	7	155604608	155604608	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHISA6	388336	broad.mit.edu	37	17	11292619	11292620	+	Intron	INS	-	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHISA6	388336	broad.mit.edu	37	17	11354618	11354618	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHISA6	388336	broad.mit.edu	37	17	11413213	11413213	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHISA9	729993	broad.mit.edu	37	16	13313815	13313815	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHROOM2	357	broad.mit.edu	37	X	9864437	9864437	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIDT1	54847	broad.mit.edu	37	3	113320534	113320534	+	Intron	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC10	89790	broad.mit.edu	37	19	51919746	51919746	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC6	946	broad.mit.edu	37	19	52033844	52033844	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIPA1L1	26037	broad.mit.edu	37	14	72055073	72055073	+	Missense_Mutation	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIPA1L2	57568	broad.mit.edu	37	1	232619670	232619670	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIPA1L3	23094	broad.mit.edu	37	19	38665132	38665132	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIRPB1	10326	broad.mit.edu	37	20	1551840	1551840	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIRT5	23408	broad.mit.edu	37	6	13612256	13612256	+	3'UTR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SI	6476	broad.mit.edu	37	3	164709182	164709182	+	Silent	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SI	6476	broad.mit.edu	37	3	164712060	164712060	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SI	6476	broad.mit.edu	37	3	164758956	164758956	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SKAP1	8631	broad.mit.edu	37	17	46217311	46217311	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SKP2	6502	broad.mit.edu	37	5	36168681	36168681	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLA2	84174	broad.mit.edu	37	20	35261997	35261997	+	Nonsense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLAMF6	114836	broad.mit.edu	37	1	160460599	160460599	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLAMF6	114836	broad.mit.edu	37	1	160477402	160477402	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC11A2	4891	broad.mit.edu	37	12	51389662	51389662	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A1	6557	broad.mit.edu	37	15	48541794	48541794	+	Silent	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A2	6558	broad.mit.edu	37	5	127503588	127503588	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC13A1	6561	broad.mit.edu	37	7	122809236	122809236	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC13A4	26266	broad.mit.edu	37	7	135384184	135384184	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC14A2	8170	broad.mit.edu	37	18	43028610	43028610	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC14A2	8170	broad.mit.edu	37	18	43051677	43051677	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC14A2	8170	broad.mit.edu	37	18	43108987	43108987	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC14A2	8170	broad.mit.edu	37	18	43207393	43207393	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC15A1	6564	broad.mit.edu	37	13	99340886	99340886	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC15A3	51296	broad.mit.edu	37	11	60709176	60709176	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC16A1	6566	broad.mit.edu	37	1	113456553	113456554	+	Frame_Shift_Del	DEL	TC	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC16A2	6567	broad.mit.edu	37	X	73664381	73664382	+	Intron	DNP	CC	AA	AA			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC17A3	10786	broad.mit.edu	37	6	25845597	25845597	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC17A4	10050	broad.mit.edu	37	6	25756237	25756237	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC18A2	6571	broad.mit.edu	37	10	119003683	119003684	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC18A2	6571	broad.mit.edu	37	10	119027183	119027183	+	Splice_Site	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC18A3	6572	broad.mit.edu	37	10	50819863	50819863	+	Nonsense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC1A2	6506	broad.mit.edu	37	11	35411923	35411923	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A10	387775	broad.mit.edu	37	11	63080833	63080833	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A11	55867	broad.mit.edu	37	11	64326572	64326572	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A16	85413	broad.mit.edu	37	6	110752467	110752467	+	Silent	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A25	387601	broad.mit.edu	37	11	62965730	62965730	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A7	10864	broad.mit.edu	37	6	43266951	43266951	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A7	10864	broad.mit.edu	37	6	43267842	43267842	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC23A2	9962	broad.mit.edu	37	20	4843540	4843540	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC24A2	25769	broad.mit.edu	37	9	19561697	19561697	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC24A2	25769	broad.mit.edu	37	9	19666876	19666876	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC24A2	25769	broad.mit.edu	37	9	19705077	19705077	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC24A4	123041	broad.mit.edu	37	14	92846735	92846735	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A13	10165	broad.mit.edu	37	7	95942838	95942838	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A20	788	broad.mit.edu	37	3	48899903	48899903	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A21	89874	broad.mit.edu	37	14	37286419	37286419	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A24	29957	broad.mit.edu	37	1	108697721	108697721	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A24	29957	broad.mit.edu	37	1	108700237	108700237	+	Frame_Shift_Del	DEL	A	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A39	51629	broad.mit.edu	37	17	42398096	42398096	+	Missense_Mutation	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A45	283130	broad.mit.edu	37	11	65149314	65149315	+	Intron	INS	-	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A10	65012	broad.mit.edu	37	12	58018324	58018324	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A4	5172	broad.mit.edu	37	7	107314550	107314550	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A5	375611	broad.mit.edu	37	7	103021548	103021548	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A7	115111	broad.mit.edu	37	8	92289581	92289581	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A7	115111	broad.mit.edu	37	8	92382506	92382506	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A7	115111	broad.mit.edu	37	8	92401582	92401582	+	Silent	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC27A6	28965	broad.mit.edu	37	5	128317191	128317191	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC27A6	28965	broad.mit.edu	37	5	128362870	128362870	+	Missense_Mutation	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC29A1	2030	broad.mit.edu	37	6	44194486	44194486	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC2A9	56606	broad.mit.edu	37	4	9982958	9982958	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC30A10	55532	broad.mit.edu	37	1	220100370	220100370	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC30A6	55676	broad.mit.edu	37	2	32422592	32422592	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC30A8	169026	broad.mit.edu	37	8	118111182	118111182	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC35B3	51000	broad.mit.edu	37	6	8420861	8420861	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC35D1	23169	broad.mit.edu	37	1	67470088	67470088	+	Nonsense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC35F1	222553	broad.mit.edu	37	6	118598583	118598583	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC35F3	148641	broad.mit.edu	37	1	234076774	234076774	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC35F3	148641	broad.mit.edu	37	1	234076776	234076776	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC35F3	148641	broad.mit.edu	37	1	234323842	234323842	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC36A3	285641	broad.mit.edu	37	5	150682854	150682854	+	Nonsense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC37A2	219855	broad.mit.edu	37	11	124955343	124955343	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC38A4	55089	broad.mit.edu	37	12	47168833	47168833	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC38A5	92745	broad.mit.edu	37	X	48319074	48319074	+	Silent	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC38A6	145389	broad.mit.edu	37	14	61449210	61449210	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC38A6	145389	broad.mit.edu	37	14	61464328	61464328	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC39A11	201266	broad.mit.edu	37	17	70845750	70845750	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC39A11	201266	broad.mit.edu	37	17	70845913	70845913	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC39A12	221074	broad.mit.edu	37	10	18282325	18282325	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC39A12	221074	broad.mit.edu	37	10	18282327	18282327	+	Intron	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC39A2	29986	broad.mit.edu	37	14	21467411	21467411	+	5'Flank	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC45A2	51151	broad.mit.edu	37	5	33964154	33964154	+	Intron	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A10	57282	broad.mit.edu	37	2	162497330	162497330	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A10	57282	broad.mit.edu	37	2	162666921	162666921	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A10	57282	broad.mit.edu	37	2	162711524	162711524	+	Nonsense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A4	8671	broad.mit.edu	37	4	72143112	72143112	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A4	8671	broad.mit.edu	37	4	72413458	72413458	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A4	8671	broad.mit.edu	37	4	72423424	72423424	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A7	9497	broad.mit.edu	37	3	27465745	27465745	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A8	9498	broad.mit.edu	37	12	51857509	51857509	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A12	159963	broad.mit.edu	37	11	26732956	26732956	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A1	6523	broad.mit.edu	37	22	32480277	32480277	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A4	6527	broad.mit.edu	37	22	32646507	32646507	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A8	160728	broad.mit.edu	37	12	101584172	101584172	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A10P	386757	broad.mit.edu	37	16	32891943	32891943	+	5'Flank	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A10P	386757	broad.mit.edu	37	16	32893820	32893820	+	5'Flank	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A11	6538	broad.mit.edu	37	3	10966640	10966640	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A12	6539	broad.mit.edu	37	12	308150	308150	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A13	6540	broad.mit.edu	37	12	358936	358936	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A13	6540	broad.mit.edu	37	12	361041	361041	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A14	11254	broad.mit.edu	37	X	115577880	115577880	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A2	6530	broad.mit.edu	37	16	55735968	55735968	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A4	6532	broad.mit.edu	37	17	28537564	28537564	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A5	9152	broad.mit.edu	37	11	20629214	20629214	+	Intron	SNP	C	T	T	rs141671283	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A5	9152	broad.mit.edu	37	11	20652351	20652351	+	Silent	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A8	6535	broad.mit.edu	37	X	152959807	152959807	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A9	6536	broad.mit.edu	37	1	44466308	44466308	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC7A14	57709	broad.mit.edu	37	3	170198536	170198536	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC7A2	6542	broad.mit.edu	37	8	17419520	17419520	+	Silent	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC8A1	6546	broad.mit.edu	37	2	40449543	40449543	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC8A1	6546	broad.mit.edu	37	2	40666583	40666583	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A10	285335	broad.mit.edu	37	3	111888063	111888063	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A10	285335	broad.mit.edu	37	3	111921060	111921060	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A10	285335	broad.mit.edu	37	3	111921336	111921336	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A10	285335	broad.mit.edu	37	3	111927182	111927182	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A4	389015	broad.mit.edu	37	2	103095305	103095305	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A7	84679	broad.mit.edu	37	X	46494906	46494906	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A9	285195	broad.mit.edu	37	3	143001212	143001212	+	Intron	SNP	C	T	T	rs77440652	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A9	285195	broad.mit.edu	37	3	143031321	143031321	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A9	285195	broad.mit.edu	37	3	143066245	143066245	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A9	285195	broad.mit.edu	37	3	143090312	143090312	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A9	285195	broad.mit.edu	37	3	143244883	143244883	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A9	285195	broad.mit.edu	37	3	143251553	143251553	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A9	285195	broad.mit.edu	37	3	143297289	143297289	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A9	285195	broad.mit.edu	37	3	143551139	143551139	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO1B1	10599	broad.mit.edu	37	12	21281914	21281914	+	5'Flank	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO1C1	53919	broad.mit.edu	37	12	20874971	20874971	+	Nonsense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO2A1	6578	broad.mit.edu	37	3	133740285	133740285	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO2B1	11309	broad.mit.edu	37	11	74880372	74880372	+	Silent	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO4C1	353189	broad.mit.edu	37	5	101585309	101585309	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLFN12L	342615	broad.mit.edu	37	17	33831686	33831686	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLFN5	162394	broad.mit.edu	37	17	33592869	33592869	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT2	9353	broad.mit.edu	37	4	20525756	20525756	+	Missense_Mutation	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT3	6586	broad.mit.edu	37	5	168093815	168093815	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT3	6586	broad.mit.edu	37	5	168119492	168119492	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT3	6586	broad.mit.edu	37	5	168180884	168180884	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT3	6586	broad.mit.edu	37	5	168244285	168244285	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT3	6586	broad.mit.edu	37	5	168271693	168271693	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT3	6586	broad.mit.edu	37	5	168271710	168271710	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT3	6586	broad.mit.edu	37	5	168364599	168364599	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT3	6586	broad.mit.edu	37	5	168719649	168719649	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLITRK2	84631	broad.mit.edu	37	X	144904349	144904349	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLITRK2	84631	broad.mit.edu	37	X	144905649	144905649	+	Missense_Mutation	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLITRK4	139065	broad.mit.edu	37	X	142716771	142716771	+	Missense_Mutation	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLITRK4	139065	broad.mit.edu	37	X	142718751	142718751	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLK	9748	broad.mit.edu	37	10	105765313	105765313	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMAD4	4089	broad.mit.edu	37	18	48604750	48604750	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMAP2	64744	broad.mit.edu	37	1	40878891	40878891	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCC2	6601	broad.mit.edu	37	12	56578915	56578915	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCC2	6601	broad.mit.edu	37	12	56579949	56579949	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCC2	6601	broad.mit.edu	37	12	56580009	56580009	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCC2	6601	broad.mit.edu	37	12	56580928	56580928	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCD1	6602	broad.mit.edu	37	12	50480065	50480065	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMC1A	8243	broad.mit.edu	37	X	53423251	53423251	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMCHD1	23347	broad.mit.edu	37	18	2673367	2673367	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMG1	23049	broad.mit.edu	37	16	18861461	18861461	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMG7	9887	broad.mit.edu	37	1	183521246	183521246	+	3'UTR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMOC1	64093	broad.mit.edu	37	14	70460992	70460992	+	Intron	DEL	G	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMOC2	64094	broad.mit.edu	37	6	169019395	169019395	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMPDL3A	10924	broad.mit.edu	37	6	123126143	123126143	+	Silent	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNAI2	6591	broad.mit.edu	37	8	49833119	49833119	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNAP25	6616	broad.mit.edu	37	20	10265249	10265249	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNAP25	6616	broad.mit.edu	37	20	10286971	10286971	+	3'UTR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNAR-B2	100170217	broad.mit.edu	37	19	50638506	50638506	+	5'Flank	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD113-6	767566	broad.mit.edu	37	14	101404604	101404604	+	5'Flank	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD115-20	100033460	broad.mit.edu	37	15	25470464	25470464	+	Intron	SNP	G	T	T	rs72546360	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNRNP200	23020	broad.mit.edu	37	2	96963959	96963959	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNRNP200	23020	broad.mit.edu	37	2	96964878	96964878	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNRNP200	23020	broad.mit.edu	37	2	96967162	96967162	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNRNP200	23020	broad.mit.edu	37	2	96967309	96967309	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNRNP200	23020	broad.mit.edu	37	2	96971183	96971183	+	5'UTR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNTB1	6641	broad.mit.edu	37	8	121757592	121757592	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNTG2	54221	broad.mit.edu	37	2	1020896	1020896	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNTG2	54221	broad.mit.edu	37	2	1023060	1023060	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNUPN	10073	broad.mit.edu	37	15	75902891	75902891	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX33	257364	broad.mit.edu	37	15	75942361	75942361	+	Silent	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX8	29886	broad.mit.edu	37	7	2314980	2314980	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOAT2	8435	broad.mit.edu	37	12	53514577	53514577	+	Silent	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOBP	55084	broad.mit.edu	37	6	107864128	107864128	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOHLH2	54937	broad.mit.edu	37	13	36747898	36747898	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS1	114815	broad.mit.edu	37	10	108378051	108378051	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS1	114815	broad.mit.edu	37	10	108434828	108434828	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS1	114815	broad.mit.edu	37	10	108896201	108896201	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS2	57537	broad.mit.edu	37	4	7650574	7650574	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS2	57537	broad.mit.edu	37	4	7669159	7669159	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS3	22986	broad.mit.edu	37	10	106486200	106486200	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS3	22986	broad.mit.edu	37	10	106635017	106635017	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS3	22986	broad.mit.edu	37	10	106679598	106679598	+	Intron	SNP	C	A	A	rs116767399	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS3	22986	broad.mit.edu	37	10	106976530	106976530	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS3	22986	broad.mit.edu	37	10	106983098	106983098	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORL1	6653	broad.mit.edu	37	11	121383919	121383919	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOS1	6654	broad.mit.edu	37	2	39222289	39222290	+	Missense_Mutation	DNP	GG	AT	AT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOX13	9580	broad.mit.edu	37	1	204092359	204092359	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOX4	6659	broad.mit.edu	37	6	21596142	21596142	+	Silent	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOX5	6660	broad.mit.edu	37	12	23728812	23728812	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOX5	6660	broad.mit.edu	37	12	24180138	24180138	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOX6	55553	broad.mit.edu	37	11	16398355	16398355	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOX6	55553	broad.mit.edu	37	11	16407940	16407940	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SP100	6672	broad.mit.edu	37	2	231359138	231359138	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SP140	11262	broad.mit.edu	37	2	231109664	231109664	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SP7	121340	broad.mit.edu	37	12	53732307	53732307	+	5'Flank	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG16	79582	broad.mit.edu	37	2	214215364	214215364	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG16	79582	broad.mit.edu	37	2	214332180	214332180	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG16	79582	broad.mit.edu	37	2	214740079	214740079	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPANXN1	494118	broad.mit.edu	37	X	144337245	144337245	+	Missense_Mutation	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPANXN3	139067	broad.mit.edu	37	X	142597155	142597155	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPANXN3	139067	broad.mit.edu	37	X	142597256	142597256	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATA16	83893	broad.mit.edu	37	3	172714606	172714606	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATA18	132671	broad.mit.edu	37	4	52940643	52940643	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATA18	132671	broad.mit.edu	37	4	52948456	52948456	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATA4	132851	broad.mit.edu	37	4	177114567	177114567	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATC1	375686	broad.mit.edu	37	8	145101742	145101742	+	Missense_Mutation	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPC25	57405	broad.mit.edu	37	2	169733935	169733935	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEF2	79925	broad.mit.edu	37	5	35759755	35759755	+	Missense_Mutation	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEF2	79925	broad.mit.edu	37	5	35779064	35779064	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEF2	79925	broad.mit.edu	37	5	35806854	35806854	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEG	10290	broad.mit.edu	37	2	220336962	220336962	+	Silent	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPG7	6687	broad.mit.edu	37	16	89611126	89611126	+	Silent	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPINK2	6691	broad.mit.edu	37	4	57686702	57686702	+	Silent	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPIRE1	56907	broad.mit.edu	37	18	12479594	12479594	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPOCK1	6695	broad.mit.edu	37	5	136372140	136372140	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPOCK3	50859	broad.mit.edu	37	4	167833963	167833963	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPON1	10418	broad.mit.edu	37	11	13984196	13984196	+	5'UTR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPON1	10418	broad.mit.edu	37	11	14063673	14063673	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPOPL	339745	broad.mit.edu	37	2	139307870	139307870	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPRR3	6707	broad.mit.edu	37	1	152975813	152975836	+	In_Frame_Del	DEL	ACACCAAGGTCCCTGAACCAGGCA	-	-	rs1970328	byFrequency;by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPRY3	10251	broad.mit.edu	37	X	155004223	155004223	+	Silent	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPRYD5	84767	broad.mit.edu	37	11	55653042	55653042	+	Silent	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPSB1	80176	broad.mit.edu	37	1	9415995	9415995	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158588930	158588930	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158596056	158596056	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158606388	158606388	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158617296	158617296	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158624658	158624658	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158636305	158636305	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158641698	158641698	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158644283	158644283	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTB	6710	broad.mit.edu	37	14	65252707	65252707	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTB	6710	broad.mit.edu	37	14	65262078	65262078	+	Missense_Mutation	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTB	6710	broad.mit.edu	37	14	65314564	65314564	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTLC3	55304	broad.mit.edu	37	20	13144887	13144887	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SQRDL	58472	broad.mit.edu	37	15	45962136	45962136	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SQSTM1	8878	broad.mit.edu	37	5	179250038	179250038	+	Nonsense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRCIN1	80725	broad.mit.edu	37	17	36707497	36707497	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRGAP2	23380	broad.mit.edu	37	1	206630303	206630303	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRP54	6729	broad.mit.edu	37	14	35482586	35482586	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRPK2	6733	broad.mit.edu	37	7	104844010	104844010	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRPK3	26576	broad.mit.edu	37	X	153047620	153047620	+	Silent	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRPR	6734	broad.mit.edu	37	11	126135991	126135991	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRPX2	27286	broad.mit.edu	37	X	99919965	99919965	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRPX2	27286	broad.mit.edu	37	X	99920563	99920563	+	Silent	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRPX	8406	broad.mit.edu	37	X	38013853	38013853	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRPX	8406	broad.mit.edu	37	X	38031332	38031332	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRRM4	84530	broad.mit.edu	37	12	119496751	119496751	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRRM4	84530	broad.mit.edu	37	12	119568489	119568489	+	Silent	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSB	6741	broad.mit.edu	37	2	170663663	170663663	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSH2	85464	broad.mit.edu	37	17	28004685	28004685	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSX3	10214	broad.mit.edu	37	X	48206584	48206584	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSX6	280657	broad.mit.edu	37	X	47976934	47976934	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSX8	280659	broad.mit.edu	37	X	52662273	52662273	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST18	9705	broad.mit.edu	37	8	53062520	53062520	+	Silent	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST18	9705	broad.mit.edu	37	8	53181228	53181228	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST6GALNAC3	256435	broad.mit.edu	37	1	76779709	76779709	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST6GALNAC3	256435	broad.mit.edu	37	1	77012311	77012311	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST6GALNAC5	81849	broad.mit.edu	37	1	77378185	77378185	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST7	7982	broad.mit.edu	37	7	116797852	116797852	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST7	7982	broad.mit.edu	37	7	116797862	116797862	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST8SIA1	6489	broad.mit.edu	37	12	22386182	22386182	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAB2	55576	broad.mit.edu	37	12	104071401	104071401	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAB2	55576	broad.mit.edu	37	12	104099529	104099529	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAC2	342667	broad.mit.edu	37	17	37369693	37369693	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STARD8	9754	broad.mit.edu	37	X	67933125	67933125	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAT1	6772	broad.mit.edu	37	2	191862700	191862700	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAT2	6773	broad.mit.edu	37	12	56744319	56744319	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAU2	27067	broad.mit.edu	37	8	74436592	74436592	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK32B	55351	broad.mit.edu	37	4	5378144	5378144	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK39	27347	broad.mit.edu	37	2	168921885	168921885	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK3	6788	broad.mit.edu	37	8	99514066	99514066	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STOML3	161003	broad.mit.edu	37	13	39541096	39541096	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STON2	85439	broad.mit.edu	37	14	81888423	81888423	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STT3A	3703	broad.mit.edu	37	11	125477690	125477690	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STX11	8676	broad.mit.edu	37	6	144468845	144468845	+	5'Flank	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STX8	9482	broad.mit.edu	37	17	9395240	9395240	+	Splice_Site	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STXBP5L	9515	broad.mit.edu	37	3	120889697	120889697	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STXBP6	29091	broad.mit.edu	37	14	25288401	25288401	+	Splice_Site	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUGT1P1	441394	broad.mit.edu	37	9	33402853	33402853	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SULF1	23213	broad.mit.edu	37	8	70515036	70515036	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SULF1	23213	broad.mit.edu	37	8	70515355	70515355	+	Intron	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SULT1B1	27284	broad.mit.edu	37	4	70615386	70615386	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SULT1C3	442038	broad.mit.edu	37	2	108881581	108881581	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUMF1	285362	broad.mit.edu	37	3	4458766	4458766	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUPT16H	11198	broad.mit.edu	37	14	21838358	21838358	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUSD4	55061	broad.mit.edu	37	1	223395462	223395462	+	3'UTR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUSD4	55061	broad.mit.edu	37	1	223396491	223396491	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUV39H2	79723	broad.mit.edu	37	10	14938888	14938888	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SV2A	9900	broad.mit.edu	37	1	149882165	149882165	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SV2A	9900	broad.mit.edu	37	1	149882375	149882375	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SV2C	22987	broad.mit.edu	37	5	75450213	75450213	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYAP1	94056	broad.mit.edu	37	X	16754429	16754429	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYCP1	6847	broad.mit.edu	37	1	115523919	115523919	+	Intron	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYCP2	10388	broad.mit.edu	37	20	58448826	58448826	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYN2	6854	broad.mit.edu	37	3	12195671	12195671	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE1	23345	broad.mit.edu	37	6	152749376	152749376	+	Missense_Mutation	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE2	23224	broad.mit.edu	37	14	64428341	64428341	+	Nonsense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE2	23224	broad.mit.edu	37	14	64669777	64669777	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE2	23224	broad.mit.edu	37	14	64670557	64670557	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE2	23224	broad.mit.edu	37	14	64691777	64691777	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNGR1	9145	broad.mit.edu	37	22	39777783	39777783	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYS1	90196	broad.mit.edu	37	20	43995878	43995878	+	3'UTR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT10	341359	broad.mit.edu	37	12	33579212	33579212	+	Missense_Mutation	SNP	C	T	T	rs143923961		TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT13	57586	broad.mit.edu	37	11	45265684	45265684	+	Silent	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT13	57586	broad.mit.edu	37	11	45274052	45274052	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT16	83851	broad.mit.edu	37	14	62482702	62482702	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT1	6857	broad.mit.edu	37	12	79325089	79325089	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT1	6857	broad.mit.edu	37	12	79366701	79366701	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT1	6857	broad.mit.edu	37	12	79670678	79670678	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT1	6857	broad.mit.edu	37	12	79671385	79671385	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT4	6860	broad.mit.edu	37	18	40853859	40853859	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT9	143425	broad.mit.edu	37	11	7305509	7305509	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT9	143425	broad.mit.edu	37	11	7361775	7361775	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT9	143425	broad.mit.edu	37	11	7390235	7390235	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYTL4	94121	broad.mit.edu	37	X	99943358	99943358	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYTL4	94121	broad.mit.edu	37	X	99945204	99945204	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYTL4	94121	broad.mit.edu	37	X	99956481	99956481	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAB2	23118	broad.mit.edu	37	6	149606640	149606640	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAB3	257397	broad.mit.edu	37	X	30986939	30986939	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TACR3	6870	broad.mit.edu	37	4	104640351	104640351	+	Missense_Mutation	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF1A	9015	broad.mit.edu	37	1	222753119	222753119	+	Silent	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF1L	138474	broad.mit.edu	37	9	32634595	32634595	+	Missense_Mutation	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF1	6872	broad.mit.edu	37	X	70596935	70596935	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF2	6873	broad.mit.edu	37	8	120814113	120814113	+	Missense_Mutation	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF9B	51616	broad.mit.edu	37	X	77394407	77394407	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TANC1	85461	broad.mit.edu	37	2	160051057	160051057	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TANC1	85461	broad.mit.edu	37	2	160053076	160053076	+	Intron	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TANC1	85461	broad.mit.edu	37	2	160076195	160076195	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TARBP1	6894	broad.mit.edu	37	1	234582570	234582570	+	Missense_Mutation	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TARSL2	123283	broad.mit.edu	37	15	102215970	102215970	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAX1BP3	30851	broad.mit.edu	37	17	3568203	3568203	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D1	23216	broad.mit.edu	37	4	38117331	38117331	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D2B	23102	broad.mit.edu	37	15	78352628	78352628	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D3P2	440452	broad.mit.edu	37	17	60351420	60351420	+	Silent	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D5	9779	broad.mit.edu	37	3	17255725	17255725	+	Missense_Mutation	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D8	11138	broad.mit.edu	37	2	101667121	101667121	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D9B	23061	broad.mit.edu	37	5	179320367	179320367	+	Silent	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBCD	6904	broad.mit.edu	37	17	80758865	80758865	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBL1X	6907	broad.mit.edu	37	X	9464598	9464598	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBL2	26608	broad.mit.edu	37	7	72988716	72988716	+	Silent	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX10	347853	broad.mit.edu	37	11	67400440	67400440	+	Silent	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX3	6926	broad.mit.edu	37	12	115120798	115120798	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBXAS1	6916	broad.mit.edu	37	7	139571873	139571873	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBXAS1	6916	broad.mit.edu	37	7	139657308	139657308	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCERG1L	256536	broad.mit.edu	37	10	132964995	132964995	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCERG1	10915	broad.mit.edu	37	5	145851225	145851225	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCF4	6925	broad.mit.edu	37	18	53114525	53114525	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCF4	6925	broad.mit.edu	37	18	53303612	53303612	+	5'Flank	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCF7L1	83439	broad.mit.edu	37	2	85454827	85454827	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCHH	7062	broad.mit.edu	37	1	152109529	152109529	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCL1A	8115	broad.mit.edu	37	14	96180206	96180206	+	Intron	DEL	C	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCL6	27004	broad.mit.edu	37	14	96135841	96135841	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDGF3	6998	broad.mit.edu	37	X	109764926	109764926	+	RNA	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEAD1	7003	broad.mit.edu	37	11	12835807	12835807	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEAD3	7005	broad.mit.edu	37	6	35448254	35448254	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEDDM1	127670	broad.mit.edu	37	1	182369011	182369011	+	Missense_Mutation	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEK	7010	broad.mit.edu	37	9	27124279	27124279	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEP1	7011	broad.mit.edu	37	14	20873432	20873432	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEP1	7011	broad.mit.edu	37	14	20873519	20873519	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEPP	374739	broad.mit.edu	37	16	58010265	58010265	+	5'Flank	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEX10	54881	broad.mit.edu	37	9	103065897	103065897	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEX13B	56156	broad.mit.edu	37	X	107224269	107224269	+	3'UTR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEX13B	56156	broad.mit.edu	37	X	107224968	107224968	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEX13B	56156	broad.mit.edu	37	X	107225336	107225336	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFAP2B	7021	broad.mit.edu	37	6	50810880	50810880	+	Silent	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFDP2	7029	broad.mit.edu	37	3	141712394	141712395	+	Frame_Shift_Del	DEL	AG	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFDP2	7029	broad.mit.edu	37	3	141724189	141724189	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFE3	7030	broad.mit.edu	37	X	48890882	48890882	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFEC	22797	broad.mit.edu	37	7	115610776	115610776	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TF	7018	broad.mit.edu	37	3	133452174	133452174	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGFB2	7042	broad.mit.edu	37	1	218607290	218607290	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGFBR1	7046	broad.mit.edu	37	9	101900582	101900582	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGIF2LX	90316	broad.mit.edu	37	X	89177631	89177631	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGM3	7053	broad.mit.edu	37	20	2320397	2320397	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGM4	7047	broad.mit.edu	37	3	44951712	44951712	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TG	7038	broad.mit.edu	37	8	133898502	133898502	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TG	7038	broad.mit.edu	37	8	133900459	133900459	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TG	7038	broad.mit.edu	37	8	133925541	133925541	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TG	7038	broad.mit.edu	37	8	133929530	133929530	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TG	7038	broad.mit.edu	37	8	133995598	133995598	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TG	7038	broad.mit.edu	37	8	134034470	134034470	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TG	7038	broad.mit.edu	37	8	134068025	134068025	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TG	7038	broad.mit.edu	37	8	134072265	134072265	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TG	7038	broad.mit.edu	37	8	134143939	134143939	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THOC2	57187	broad.mit.edu	37	X	122760646	122760646	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THOC2	57187	broad.mit.edu	37	X	122803900	122803900	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THSD7A	221981	broad.mit.edu	37	7	11468907	11468907	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THSD7A	221981	broad.mit.edu	37	7	11486869	11486869	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THSD7A	221981	broad.mit.edu	37	7	11611365	11611365	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THSD7B	80731	broad.mit.edu	37	2	137755295	137755295	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THSD7B	80731	broad.mit.edu	37	2	137917703	137917703	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THSD7B	80731	broad.mit.edu	37	2	137946638	137946638	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THSD7B	80731	broad.mit.edu	37	2	138003989	138003989	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THTPA	79178	broad.mit.edu	37	14	24013736	24013736	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THTPA	79178	broad.mit.edu	37	14	24015486	24015486	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THYN1	29087	broad.mit.edu	37	11	134118959	134118959	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIFAB	497189	broad.mit.edu	37	5	134785501	134785501	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIGD7	91151	broad.mit.edu	37	16	3350041	3350041	+	Nonsense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIMD4	91937	broad.mit.edu	37	5	156353300	156353300	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TINF2	26277	broad.mit.edu	37	14	24710289	24710289	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIRAP	114609	broad.mit.edu	37	11	126163534	126163534	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TJP2	9414	broad.mit.edu	37	9	71850790	71850790	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TKTL1	8277	broad.mit.edu	37	X	153533561	153533561	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TKTL1	8277	broad.mit.edu	37	X	153543399	153543399	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLE3	7090	broad.mit.edu	37	15	70343637	70343637	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLE4	7091	broad.mit.edu	37	9	82212245	82212245	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLK1	9874	broad.mit.edu	37	2	171863020	171863020	+	Missense_Mutation	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLK1	9874	broad.mit.edu	37	2	171872531	171872531	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLL2	7093	broad.mit.edu	37	10	98136417	98136417	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLN1	7094	broad.mit.edu	37	9	35698594	35698594	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TM6SF2	53345	broad.mit.edu	37	19	19375384	19375384	+	3'UTR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TM7SF3	51768	broad.mit.edu	37	12	27148212	27148212	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TM7SF4	81501	broad.mit.edu	37	8	105351624	105351624	+	5'Flank	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TM7SF4	81501	broad.mit.edu	37	8	105360984	105360984	+	Silent	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TM7SF4	81501	broad.mit.edu	37	8	105362280	105362280	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TM9SF4	9777	broad.mit.edu	37	20	30729761	30729761	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMBIM4	51643	broad.mit.edu	37	12	66539516	66539517	+	Intron	DNP	TT	AA	AA			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMC1	117531	broad.mit.edu	37	9	75369754	75369754	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMC1	117531	broad.mit.edu	37	9	75382853	75382853	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMC2	117532	broad.mit.edu	37	20	2575566	2575566	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMC5	79838	broad.mit.edu	37	16	19477481	19477481	+	Silent	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMCC1	23023	broad.mit.edu	37	3	129389737	129389737	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMCC3	57458	broad.mit.edu	37	12	94975859	94975859	+	Silent	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMCC3	57458	broad.mit.edu	37	12	95008663	95008663	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMED5	50999	broad.mit.edu	37	1	93625730	93625730	+	Silent	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMED6	146456	broad.mit.edu	37	16	69385776	69385776	+	5'Flank	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM108	66000	broad.mit.edu	37	3	132953390	132953390	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM108	66000	broad.mit.edu	37	3	133004877	133004877	+	Intron	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM110	375346	broad.mit.edu	37	3	52894711	52894711	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM117	84216	broad.mit.edu	37	12	44781886	44781886	+	Nonsense_Mutation	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM131	23505	broad.mit.edu	37	2	98413727	98413727	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM132B	114795	broad.mit.edu	37	12	125840455	125840455	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM132B	114795	broad.mit.edu	37	12	125854414	125854414	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM132B	114795	broad.mit.edu	37	12	126051981	126051981	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM132B	114795	broad.mit.edu	37	12	126128558	126128558	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM132B	114795	broad.mit.edu	37	12	126139116	126139116	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM132D	121256	broad.mit.edu	37	12	129569092	129569092	+	Silent	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM132D	121256	broad.mit.edu	37	12	129664640	129664640	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM132D	121256	broad.mit.edu	37	12	129751115	129751115	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM132D	121256	broad.mit.edu	37	12	129927792	129927792	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM132D	121256	broad.mit.edu	37	12	130240747	130240747	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM132E	124842	broad.mit.edu	37	17	32936981	32936981	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM132E	124842	broad.mit.edu	37	17	32963124	32963124	+	Silent	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM135	65084	broad.mit.edu	37	11	86806023	86806023	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM146	257062	broad.mit.edu	37	19	5770981	5770981	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM14A	28978	broad.mit.edu	37	6	52542012	52542013	+	Intron	INS	-	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM164	84187	broad.mit.edu	37	X	109324810	109324810	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM164	84187	broad.mit.edu	37	X	109372497	109372497	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM164	84187	broad.mit.edu	37	X	109383937	109383937	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM169	92691	broad.mit.edu	37	2	216960648	216960648	+	5'UTR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM176B	28959	broad.mit.edu	37	7	150489951	150489951	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM181	57583	broad.mit.edu	37	6	159006389	159006389	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM194A	23306	broad.mit.edu	37	12	57472331	57472331	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM232	642987	broad.mit.edu	37	5	109894757	109894757	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM27	57393	broad.mit.edu	37	X	15652592	15652592	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM27	57393	broad.mit.edu	37	X	15670841	15670841	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM31	203562	broad.mit.edu	37	X	102968620	102968620	+	Silent	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM35	59353	broad.mit.edu	37	X	100349541	100349541	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM38A	79041	broad.mit.edu	37	19	16797243	16797243	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM53	79639	broad.mit.edu	37	1	45125889	45125889	+	Missense_Mutation	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM71	137835	broad.mit.edu	37	8	133745791	133745791	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM71	137835	broad.mit.edu	37	8	133771213	133771213	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM74	157753	broad.mit.edu	37	8	109797348	109797348	+	5'UTR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMIGD2	126259	broad.mit.edu	37	19	4292563	4292563	+	3'UTR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMLHE	55217	broad.mit.edu	37	X	154743473	154743473	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS11B	132724	broad.mit.edu	37	4	69101828	69101828	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS11F	389208	broad.mit.edu	37	4	68928316	68928317	+	Intron	DNP	TC	CA	CA			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS11F	389208	broad.mit.edu	37	4	68974187	68974187	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS15	5651	broad.mit.edu	37	21	19642343	19642343	+	Silent	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS15	5651	broad.mit.edu	37	21	19754741	19754741	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMSB15B	286527	broad.mit.edu	37	X	103216887	103216887	+	5'Flank	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMTC1	83857	broad.mit.edu	37	12	29790070	29790070	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMTC1	83857	broad.mit.edu	37	12	29906108	29906108	+	Intron	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMX3	54495	broad.mit.edu	37	18	66346899	66346899	+	Intron	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNC	3371	broad.mit.edu	37	9	117792633	117792633	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNC	3371	broad.mit.edu	37	9	117838357	117838357	+	Silent	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNFRSF10D	8793	broad.mit.edu	37	8	23002547	23002547	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNFRSF11A	8792	broad.mit.edu	37	18	60036186	60036186	+	Nonsense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNIK	23043	broad.mit.edu	37	3	170828673	170828673	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNIK	23043	broad.mit.edu	37	3	171126785	171126785	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNKS	8658	broad.mit.edu	37	8	9413471	9413471	+	Nonsense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNNC2	7125	broad.mit.edu	37	20	44452837	44452837	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNNI3K	51086	broad.mit.edu	37	1	74808830	74808830	+	Missense_Mutation	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNNI3K	51086	broad.mit.edu	37	1	74833589	74833589	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNNI3K	51086	broad.mit.edu	37	1	75009443	75009443	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNN	63923	broad.mit.edu	37	1	175105210	175105210	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNN	63923	broad.mit.edu	37	1	175108247	175108247	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNRC6A	27327	broad.mit.edu	37	16	24831694	24831694	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNR	7143	broad.mit.edu	37	1	175324275	175324275	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNR	7143	broad.mit.edu	37	1	175325528	175325528	+	Silent	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNR	7143	broad.mit.edu	37	1	175325590	175325590	+	Nonsense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNR	7143	broad.mit.edu	37	1	175325601	175325601	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNR	7143	broad.mit.edu	37	1	175331742	175331742	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNR	7143	broad.mit.edu	37	1	175336425	175336425	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNR	7143	broad.mit.edu	37	1	175355144	175355144	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNR	7143	broad.mit.edu	37	1	175418026	175418026	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNR	7143	broad.mit.edu	37	1	175427501	175427501	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNR	7143	broad.mit.edu	37	1	175579405	175579405	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNR	7143	broad.mit.edu	37	1	175650544	175650544	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNR	7143	broad.mit.edu	37	1	175655191	175655191	+	Intron	SNP	G	T	T	rs142990409	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNR	7143	broad.mit.edu	37	1	175670406	175670406	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNR	7143	broad.mit.edu	37	1	175673583	175673583	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNR	7143	broad.mit.edu	37	1	175680512	175680512	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNR	7143	broad.mit.edu	37	1	175690034	175690034	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNR	7143	broad.mit.edu	37	1	175698211	175698211	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNS1	7145	broad.mit.edu	37	2	218755749	218755749	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNXB	7148	broad.mit.edu	37	6	32023848	32023848	+	Silent	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOM1L1	10040	broad.mit.edu	37	17	53027483	53027483	+	Missense_Mutation	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOMM40L	84134	broad.mit.edu	37	1	161211763	161211763	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOP2B	7155	broad.mit.edu	37	3	25642491	25642491	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOX2	84969	broad.mit.edu	37	20	42635448	42635448	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOX2	84969	broad.mit.edu	37	20	42694773	42694773	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP53I11	9537	broad.mit.edu	37	11	44958879	44958879	+	Silent	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP53	7157	broad.mit.edu	37	17	7577506	7577506	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP53	7157	broad.mit.edu	37	17	7577800	7577800	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP63	8626	broad.mit.edu	37	3	189585695	189585695	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPK1	27010	broad.mit.edu	37	7	144320469	144320469	+	Intron	SNP	T	A	A	rs75366098		TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPRG1	285386	broad.mit.edu	37	3	188954195	188954195	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPR	7175	broad.mit.edu	37	1	186314889	186314889	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE2P3	220115	broad.mit.edu	37	13	53153534	53153534	+	RNA	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE	7179	broad.mit.edu	37	21	10907329	10907329	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE	7179	broad.mit.edu	37	21	10908820	10908820	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE	7179	broad.mit.edu	37	21	10909662	10909662	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE	7179	broad.mit.edu	37	21	10965027	10965027	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPX2	22974	broad.mit.edu	37	20	30366810	30366810	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAPPC10	7109	broad.mit.edu	37	21	45513788	45513788	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRDN	10345	broad.mit.edu	37	6	123600184	123600184	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRDN	10345	broad.mit.edu	37	6	123673597	123673597	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRDN	10345	broad.mit.edu	37	6	123683476	123683476	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TREM2	54209	broad.mit.edu	37	6	41126388	41126388	+	3'UTR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TREML4	285852	broad.mit.edu	37	6	41196296	41196296	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRHR	7201	broad.mit.edu	37	8	110108405	110108405	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM29	23650	broad.mit.edu	37	11	119998058	119998058	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM33	51592	broad.mit.edu	37	1	114940381	114940381	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM42	287015	broad.mit.edu	37	3	140407130	140407130	+	Missense_Mutation	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIML1	339976	broad.mit.edu	37	4	189063402	189063402	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIOBP	11078	broad.mit.edu	37	22	38130882	38130882	+	Silent	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIO	7204	broad.mit.edu	37	5	14203979	14203979	+	Intron	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIP13	9319	broad.mit.edu	37	5	900483	900483	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRMT2B	79979	broad.mit.edu	37	X	100274614	100274614	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TROAP	10024	broad.mit.edu	37	12	49718101	49718101	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPC3	7222	broad.mit.edu	37	4	122828402	122828402	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPC5	7224	broad.mit.edu	37	X	111097379	111097379	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPC5	7224	broad.mit.edu	37	X	111121980	111121980	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPC5	7224	broad.mit.edu	37	X	111155653	111155653	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPC5	7224	broad.mit.edu	37	X	111299235	111299235	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPC5	7224	broad.mit.edu	37	X	111300456	111300456	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPC5	7224	broad.mit.edu	37	X	111309411	111309411	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPC7	57113	broad.mit.edu	37	5	135634082	135634082	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM1	4308	broad.mit.edu	37	15	31319017	31319017	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM3	80036	broad.mit.edu	37	9	73398835	73398835	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM3	80036	broad.mit.edu	37	9	73528289	73528289	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM3	80036	broad.mit.edu	37	9	74036788	74036788	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM6	140803	broad.mit.edu	37	9	77377034	77377034	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM6	140803	broad.mit.edu	37	9	77397219	77397219	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM8	79054	broad.mit.edu	37	2	234891745	234891745	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPV3	162514	broad.mit.edu	37	17	3458210	3458210	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPV5	56302	broad.mit.edu	37	7	142616536	142616536	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRRAP	8295	broad.mit.edu	37	7	98574418	98574418	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSHR	7253	broad.mit.edu	37	14	81422175	81422175	+	Frame_Shift_Del	DEL	C	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSHR	7253	broad.mit.edu	37	14	81449404	81449404	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSHR	7253	broad.mit.edu	37	14	81514492	81514492	+	Intron	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSHR	7253	broad.mit.edu	37	14	81558822	81558822	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSHR	7253	broad.mit.edu	37	14	81609869	81609869	+	Silent	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSHZ2	128553	broad.mit.edu	37	20	51621567	51621567	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSHZ2	128553	broad.mit.edu	37	20	51748087	51748088	+	Intron	DNP	GG	TT	TT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSHZ2	128553	broad.mit.edu	37	20	51790929	51790929	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSHZ2	128553	broad.mit.edu	37	20	51885967	51885967	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSHZ3	57616	broad.mit.edu	37	19	31778493	31778493	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSHZ3	57616	broad.mit.edu	37	19	31782274	31782274	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSKS	60385	broad.mit.edu	37	19	50247792	50247792	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSNAX-DISC1	100303453	broad.mit.edu	37	1	231693158	231693158	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSNAXIP1	55815	broad.mit.edu	37	16	67854914	67854914	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSPAN10	83882	broad.mit.edu	37	17	79612190	79612191	+	Missense_Mutation	DNP	CC	TT	TT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSPAN17	26262	broad.mit.edu	37	5	176083288	176083288	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSPAN6	7105	broad.mit.edu	37	X	99888270	99888270	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSPAN7	7102	broad.mit.edu	37	X	38517957	38517957	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSPAN9	10867	broad.mit.edu	37	12	3306702	3306702	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSPYL1	7259	broad.mit.edu	37	6	116600261	116600261	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTBK2	146057	broad.mit.edu	37	15	43038398	43038398	+	Silent	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC12	54970	broad.mit.edu	37	11	113234784	113234784	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC18	118491	broad.mit.edu	37	10	75059368	75059368	+	Nonsense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC23	64927	broad.mit.edu	37	15	99696448	99696448	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC24	164118	broad.mit.edu	37	1	156553320	156553320	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC37	9652	broad.mit.edu	37	5	94860306	94860306	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC39B	158219	broad.mit.edu	37	9	15279463	15279463	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC7A	57217	broad.mit.edu	37	2	47229731	47229731	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC7B	145567	broad.mit.edu	37	14	91196635	91196635	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTLL3	26140	broad.mit.edu	37	3	9874678	9874678	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTLL5	23093	broad.mit.edu	37	14	76195106	76195106	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179422842	179422842	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179429693	179429693	+	Missense_Mutation	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179437781	179437781	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179454078	179454078	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179457205	179457205	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179457668	179457668	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179469545	179469545	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179499460	179499460	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179538317	179538317	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179579978	179579978	+	Silent	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179580074	179580074	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179580201	179580201	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179605909	179605909	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179615590	179615590	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179632585	179632585	+	Silent	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBA8	51807	broad.mit.edu	37	22	18562489	18562489	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBB3	10381	broad.mit.edu	37	16	90001393	90001393	+	Silent	SNP	G	T	T	rs143029958	byFrequency	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBB4Q	56604	broad.mit.edu	37	4	190903817	190903817	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUB	7275	broad.mit.edu	37	11	8087775	8087775	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TULP1	7287	broad.mit.edu	37	6	35480560	35480560	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUSC3	7991	broad.mit.edu	37	8	15601106	15601106	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TXK	7294	broad.mit.edu	37	4	48095877	48095877	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TXNDC3	51314	broad.mit.edu	37	7	37907506	37907506	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TXNRD2	10587	broad.mit.edu	37	22	19919783	19919783	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TYR	7299	broad.mit.edu	37	11	88924417	88924417	+	Nonsense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TYR	7299	broad.mit.edu	37	11	89008050	89008050	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TYW1B	441250	broad.mit.edu	37	7	72267354	72267354	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
T	6862	broad.mit.edu	37	6	166571813	166571813	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
U2AF1	7307	broad.mit.edu	37	21	44515895	44515895	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UACA	55075	broad.mit.edu	37	15	70958577	70958577	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBA6	55236	broad.mit.edu	37	4	68529553	68529553	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBAC2	337867	broad.mit.edu	37	13	99993551	99993551	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBASH3A	53347	broad.mit.edu	37	21	43831300	43831300	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBD	10537	broad.mit.edu	37	6	29524019	29524019	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE2A	7319	broad.mit.edu	37	X	118708964	118708964	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE2I	7329	broad.mit.edu	37	16	1374771	1374771	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE3A	7337	broad.mit.edu	37	15	25589245	25589245	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE3C	9690	broad.mit.edu	37	7	156974947	156974947	+	Missense_Mutation	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBFD1	56061	broad.mit.edu	37	16	23578552	23578552	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBQLN3	50613	broad.mit.edu	37	11	5529428	5529428	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR1	197131	broad.mit.edu	37	15	43244649	43244649	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR2	23304	broad.mit.edu	37	6	42600415	42600415	+	Silent	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR2	23304	broad.mit.edu	37	6	42615820	42615820	+	Intron	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR4	23352	broad.mit.edu	37	1	19437263	19437263	+	Silent	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBXN11	91544	broad.mit.edu	37	1	26629460	26629460	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBXN11	91544	broad.mit.edu	37	1	26629462	26629462	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBXN2B	137886	broad.mit.edu	37	8	59338573	59338573	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGGT1	56886	broad.mit.edu	37	2	128853221	128853221	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGGT1	56886	broad.mit.edu	37	2	128922461	128922461	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2A1	10941	broad.mit.edu	37	4	70505471	70505471	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B4	7363	broad.mit.edu	37	4	70359446	70359446	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT3A1	133688	broad.mit.edu	37	5	35956045	35956045	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT3A1	133688	broad.mit.edu	37	5	35965558	35965558	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT3A1	133688	broad.mit.edu	37	5	35991143	35991143	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ULK2	9706	broad.mit.edu	37	17	19700851	19700851	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ULK4	54986	broad.mit.edu	37	3	41645926	41645926	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ULK4	54986	broad.mit.edu	37	3	41983564	41983564	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC13A	23025	broad.mit.edu	37	19	17720642	17720642	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC13B	10497	broad.mit.edu	37	9	35382331	35382331	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC13B	10497	broad.mit.edu	37	9	35390050	35390051	+	Intron	DEL	TG	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC13C	440279	broad.mit.edu	37	15	54531976	54531976	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC45A	55898	broad.mit.edu	37	15	91492490	91492490	+	Intron	DEL	C	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC45A	55898	broad.mit.edu	37	15	91496492	91496492	+	Silent	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC5B	219699	broad.mit.edu	37	10	73048446	73048446	+	Silent	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC5C	8633	broad.mit.edu	37	4	96128003	96128003	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC5C	8633	broad.mit.edu	37	4	96151787	96151787	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC5D	137970	broad.mit.edu	37	8	35248740	35248740	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UPF0639	400224	broad.mit.edu	37	14	69952490	69952490	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UPF2	26019	broad.mit.edu	37	10	12076967	12076967	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UPF3A	65110	broad.mit.edu	37	13	115048347	115048347	+	Missense_Mutation	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UPP2	151531	broad.mit.edu	37	2	158974392	158974392	+	Silent	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UQCRB	7381	broad.mit.edu	37	8	97243333	97243333	+	Missense_Mutation	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	215959901	215959901	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216015950	216015950	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216074272	216074272	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216241827	216241827	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216246634	216246634	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216318648	216318648	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216338058	216338058	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216390814	216390814	+	Missense_Mutation	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216542671	216542671	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP13	8975	broad.mit.edu	37	3	179399445	179399445	+	Intron	DEL	G	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP13	8975	broad.mit.edu	37	3	179499619	179499619	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP15	9958	broad.mit.edu	37	12	62790400	62790400	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP24	23358	broad.mit.edu	37	1	55589146	55589146	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP27X	389856	broad.mit.edu	37	X	49646012	49646012	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP30	84749	broad.mit.edu	37	12	109510057	109510057	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP34	9736	broad.mit.edu	37	2	61575121	61575121	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP42	84132	broad.mit.edu	37	7	6189873	6189873	+	Silent	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP47	55031	broad.mit.edu	37	11	11959973	11959973	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP50	373509	broad.mit.edu	37	15	50831179	50831179	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP54	159195	broad.mit.edu	37	10	75258979	75258979	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP9X	8239	broad.mit.edu	37	X	41057842	41057842	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USPL1	10208	broad.mit.edu	37	13	31221233	31221233	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTP14A	10813	broad.mit.edu	37	X	129055435	129055435	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTP14A	10813	broad.mit.edu	37	X	129059013	129059013	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTP14A	10813	broad.mit.edu	37	X	129063622	129063622	+	3'UTR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTP6	55813	broad.mit.edu	37	17	30190500	30190500	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTRN	7402	broad.mit.edu	37	6	145021222	145021222	+	Splice_Site	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UVRAG	7405	broad.mit.edu	37	11	75723452	75723452	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	101633612	101633612	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	103040861	103040861	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	103047544	103047544	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	106342715	106342715	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	106382369	106382369	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	107102048	107102048	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	107240031	107240031	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	107302494	107302494	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	107303502	107303502	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	107444968	107444968	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	108177664	108177664	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	109798085	109798085	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	109827907	109827907	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	110222151	110222151	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	110369883	110369883	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	110371303	110371304	+	IGR	DNP	CC	AA	AA			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	110577301	110577301	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	112182822	112182822	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	113551922	113551922	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	113848028	113848028	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	113954896	113954896	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	119360520	119360520	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	119609512	119609512	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	120064307	120064307	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	125078537	125078537	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	126056176	126056176	+	IGR	SNP	C	A	A	rs66599310		TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	128562775	128562775	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	132428444	132428444	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	133306345	133306345	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	15231296	15231296	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	15509091	15509091	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	15546855	15546855	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	16062839	16062839	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	16095156	16095156	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	16189500	16189500	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	16265252	16265252	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	16352038	16352039	+	IGR	DNP	CA	AG	AG			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	17569868	17569868	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	18397166	18397166	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	19024936	19024936	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	19027220	19027220	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	19027365	19027365	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	19296168	19296168	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	19450660	19450660	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	20928620	20928620	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	23145006	23145006	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	23501623	23501623	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	25936861	25936861	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	2660654	2660654	+	IGR	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	2679964	2679964	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	2919027	2919027	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	29534650	29534650	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	30935367	30935367	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	31856387	31856387	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	3356882	3356882	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	33895825	33895825	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	33926095	33926095	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	36327544	36327544	+	IGR	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	37695964	37695964	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	37719390	37719390	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	38539640	38539640	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	38609724	38609724	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	4229914	4229914	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	42396517	42396517	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	42647840	42647840	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	42680934	42680934	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	4373451	4373451	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	44272758	44272758	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	44563099	44563099	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	46174499	46174499	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	46180029	46180029	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	50649063	50649063	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	5377384	5377384	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	54162532	54162532	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	54416029	54416029	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	57581957	57581957	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	57682064	57682064	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	57731976	57731976	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	58274345	58274345	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	59101499	59101499	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	59935711	59935711	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	61297901	61297901	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	65841027	65841027	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	7117856	7117856	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	71542169	71542169	+	IGR	SNP	C	T	T	rs137870444	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	72553932	72553932	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	74413892	74413892	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	75640177	75640178	+	IGR	DNP	AG	GT	GT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	79492466	79492466	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	79930902	79930902	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	82446917	82446917	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	82549886	82549886	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	82559837	82559837	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	83255503	83255503	+	IGR	SNP	C	T	T	rs146329191	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	85067401	85067401	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	8524710	8524710	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	85396866	85396866	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	86468707	86468707	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	86674753	86674753	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	86733920	86733920	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	90545605	90545605	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	9073495	9073495	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	91846237	91846237	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	94428915	94428915	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	96612676	96612676	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	96928809	96928809	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	100398245	100398245	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	101298005	101298005	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	101660081	101660081	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	102834796	102834796	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	104063245	104063245	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	104084379	104084379	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	104198645	104198645	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	104415424	104415424	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	104454886	104454886	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	104487634	104487634	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	104584374	104584374	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	104614864	104614864	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	104647802	104647802	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	104988448	104988448	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	105988877	105988878	+	IGR	DNP	GG	CA	CA			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	106187693	106187693	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	106370432	106370432	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	106531277	106531277	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	109634165	109634165	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	109637510	109637510	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	110796964	110796964	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	112519795	112519795	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	11261198	11261198	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	114656012	114656012	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	114751812	114751812	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	114843367	114843367	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	114877831	114877831	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	114916264	114916264	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	115592491	115592491	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	115616612	115616612	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	115700497	115700497	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	115759161	115759161	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	115826233	115826233	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	115856510	115856510	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	11774074	11774074	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	119400792	119400792	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	119474343	119474343	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	121539432	121539432	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	121629097	121629097	+	IGR	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	123565820	123565820	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	123670327	123670327	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	124330540	124330540	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	124351307	124351307	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	124752486	124752486	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	125377243	125377243	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	127078353	127078353	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	127263368	127263368	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	127543145	127543145	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	127800159	127800159	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	127893165	127893165	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	127972786	127972786	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	131001458	131001458	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	13899808	13899808	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	13899937	13899938	+	IGR	DNP	GG	TT	TT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	15304035	15304035	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	15399778	15399778	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	15456786	15456786	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	15604743	15604743	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	15957668	15957668	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	17579160	17579160	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	18978392	18978392	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	21782262	21782262	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	22992865	22992865	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	23383822	23383822	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	25515343	25515343	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	26928369	26928369	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	27164612	27164612	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	27175576	27175576	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	27977372	27977372	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	28547577	28547577	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	29361165	29361165	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	29523188	29523188	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	29654632	29654632	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	29692425	29692425	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	29747895	29747895	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	29862310	29862310	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	29978037	29978037	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	30077174	30077174	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	30812275	30812275	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	35882596	35882596	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	3617475	3617475	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	36783324	36783324	+	IGR	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	36800549	36800549	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	36965342	36965342	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	37046329	37046329	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	37214788	37214788	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	37459199	37459199	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	38188668	38188668	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	39000390	39000390	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	39835112	39835112	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	40011847	40011847	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	41531938	41531938	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	41555967	41555967	+	IGR	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	41874152	41874152	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	41904135	41904135	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	42132850	42132850	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	42432306	42432306	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	42614065	42614065	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	43121830	43121830	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	4480899	4480899	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	45108101	45108101	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	45542625	45542625	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	45544463	45544463	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	4824454	4824454	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	48970159	48970159	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49053438	49053438	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49078862	49078862	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49329737	49329737	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49852559	49852559	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49920727	49920727	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49941959	49941959	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	50206832	50206832	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	5023247	5023247	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	50234633	50234633	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	5058452	5058452	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	5058454	5058454	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	5058459	5058459	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	51406590	51406590	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55061122	55061122	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55093574	55093574	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55243561	55243561	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55245619	55245619	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55259133	55259133	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55979153	55979153	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	56216977	56216977	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	56972786	56972786	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	58855421	58855421	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	58866885	58866885	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	59089608	59089608	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	60010496	60010496	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	6067493	6067493	+	IGR	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	61933575	61933575	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	67490304	67490304	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	67689636	67689636	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	6943287	6943287	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	71097455	71097455	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	71288083	71288083	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	71361861	71361861	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	7144154	7144154	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	71604571	71604571	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	71961751	71961751	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	72170626	72170626	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	7244893	7244893	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	74736703	74736703	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	79249977	79249977	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	79356297	79356297	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	79452572	79452572	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	79506680	79506680	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	79699117	79699117	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	79782544	79782544	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	79801390	79801390	+	IGR	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	79824677	79824677	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	79829069	79829069	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	79998517	79998517	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	80027359	80027359	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	80142133	80142133	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	80795686	80795686	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	81539067	81539067	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	81569975	81569975	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	82194959	82194959	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	82330224	82330224	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	85950137	85950137	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	86062339	86062339	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	86474456	86474456	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	87457642	87457642	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	87542521	87542521	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	87679450	87679450	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	87828268	87828268	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	89364308	89364308	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	89371353	89371353	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	89486784	89486784	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	89804319	89804319	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	91089965	91089965	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	91169265	91169265	+	IGR	SNP	C	A	A	rs147752178	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	91466511	91466511	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	91557437	91557437	+	IGR	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	91743495	91743495	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	93638920	93638920	+	IGR	SNP	C	G	G	rs112104788	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	94477161	94477161	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	94610140	94610140	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	95109280	95109280	+	IGR	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	96224226	96224226	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	96780971	96780971	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	97094263	97094263	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	97679753	97679753	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	98747332	98747332	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	100405010	100405010	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	100958786	100958786	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	101524353	101524353	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	102632632	102632632	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	102752246	102752246	+	IGR	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	103001947	103001947	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	103011582	103011582	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	103176699	103176699	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	103386096	103386096	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	103527392	103527392	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	103550719	103550719	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	105985370	105985370	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	106124299	106124299	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	106258142	106258142	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	106357429	106357429	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	106357735	106357735	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	10638990	10638990	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	106452117	106452117	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	106591965	106591965	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	10660056	10660056	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	108466230	108466230	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	10903884	10903884	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	109299108	109299109	+	IGR	INS	-	AC	AC	rs145105002	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	110530273	110530273	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	111229628	111229628	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	111367383	111367383	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	111452058	111452058	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	114158933	114158933	+	IGR	SNP	C	A	A	rs145336674	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	114165987	114165987	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	114174366	114174366	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	114682794	114682794	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	115141897	115141897	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	115337595	115337595	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	115528792	115528792	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	115624208	115624208	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	115631108	115631108	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	115730015	115730015	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	115833284	115833284	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	115858375	115858375	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	115861055	115861055	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	115866637	115866637	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	115895258	115895258	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	115940714	115940714	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	116023918	116023918	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	116107550	116107550	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	116276472	116276472	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	11628094	11628094	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	116281972	116281972	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	11666848	11666848	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	117871170	117871170	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	119142423	119142423	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	119222983	119222984	+	IGR	DNP	CA	AG	AG			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	120082608	120082608	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	120722785	120722785	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	124667599	124667599	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	124680785	124680785	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	126200719	126200719	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	126365342	126365342	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	126366074	126366074	+	IGR	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	126569304	126569304	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	126573447	126573447	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	127707438	127707438	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	127804447	127804447	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	128090469	128090469	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	128108833	128108833	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	128120147	128120147	+	IGR	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	128239663	128239663	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	128276002	128276002	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	128301389	128301389	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	128604696	128604696	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	128648948	128648948	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	128674858	128674858	+	IGR	SNP	G	T	T	rs74459409		TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	128712752	128712752	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	128793379	128793379	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	128867726	128867726	+	IGR	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	130704094	130704094	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	13432110	13432110	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	13461721	13461721	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	153718	153718	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	17221438	17221438	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	17537103	17537104	+	IGR	DNP	CC	AT	AT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	17630692	17630692	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	17700673	17700673	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	17962721	17962721	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	18346606	18346606	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	19198897	19198897	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	20308126	20308126	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	20498997	20498997	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	20504838	20504838	+	IGR	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	23004184	23004184	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	23107550	23107551	+	IGR	DNP	GG	TT	TT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	23663730	23663730	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	24846357	24846357	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	24846999	24846999	+	IGR	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	25140165	25140165	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	25956457	25956457	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	25982141	25982141	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	27288037	27288037	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	27317759	27317759	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	27349549	27349549	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	28008629	28008629	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	28064481	28064481	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	28067047	28067047	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	28070573	28070573	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	28073861	28073861	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	28717551	28717551	+	IGR	DEL	G	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	28761139	28761139	+	IGR	DEL	T	-	-	rs35395196		TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	28885008	28885008	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	28926182	28926182	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	29129959	29129959	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	29205821	29205821	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	29240260	29240260	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	29259689	29259689	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	29265870	29265870	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	29557899	29557899	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	30049625	30049625	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	30187563	30187563	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	30335780	30335780	+	IGR	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	30368055	30368055	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	30605662	30605662	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	30624243	30624243	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	30761504	30761504	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	33261129	33261129	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	33686992	33686992	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	33881202	33881202	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	33883808	33883808	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	34287751	34287751	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	34341579	34341579	+	IGR	SNP	C	T	T	rs113819284		TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	34359259	34359259	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	34362141	34362141	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	34460297	34460297	+	IGR	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	34466863	34466864	+	IGR	DNP	CC	AT	AT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	34467102	34467102	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	34467725	34467725	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	34469847	34469847	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	34496034	34496034	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	34759546	34759546	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	38645405	38645405	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	39589247	39589247	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	3991247	3991247	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	40813928	40813928	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	40858334	40858334	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	41474547	41474547	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	41511864	41511864	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	4231126	4231126	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	43067968	43067968	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	43113854	43113854	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	43327916	43327916	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	43375047	43375047	+	IGR	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	43460486	43460486	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	43599469	43599469	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	43984163	43984163	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	44844108	44844108	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	45375545	45375545	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	45403573	45403573	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	45485759	45485759	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	45903477	45903477	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	46480536	46480536	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	46484267	46484267	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	46520274	46520275	+	IGR	DNP	CC	AA	AA			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	46720123	46720123	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	46918896	46918896	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	47005165	47005165	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	47786439	47786439	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	52226460	52226460	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	55083997	55083997	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	55443583	55443583	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	58307108	58307108	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	58360761	58360761	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	58536819	58536819	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	58590952	58590952	+	IGR	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	58671443	58671443	+	IGR	DEL	G	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	59341236	59341236	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	59528739	59528739	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	59724565	59724565	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	59786433	59786433	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	59821966	59821966	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	59835568	59835568	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	60292895	60292895	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	60510743	60510743	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	60510793	60510793	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	61607691	61607691	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	61614172	61614172	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	61974731	61974731	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	61977720	61977720	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	63753785	63753785	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	64078794	64078794	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	66057099	66057099	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	67979087	67979087	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	68651422	68651422	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	68881873	68881873	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	70506126	70506126	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	70543137	70543137	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	71505802	71505802	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	72441322	72441322	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	72470616	72470616	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	72536442	72536442	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	72597576	72597576	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	72597688	72597688	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	74223513	74223513	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	74749414	74749414	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	76173285	76173285	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	7684923	7684923	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	77021366	77021366	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	7719695	7719695	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	77328421	77328421	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	77481330	77481330	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	77657998	77657998	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	77739671	77739671	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	77758214	77758214	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	78130237	78130237	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	78132598	78132598	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	78826464	78826464	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	7936166	7936166	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	80632703	80632703	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	80659004	80659004	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	80665453	80665453	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	81451488	81451488	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	82922487	82922487	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	83704716	83704716	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	84035758	84035758	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	84227243	84227243	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	84259862	84259863	+	IGR	DNP	GG	TT	TT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	85242482	85242482	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	85335210	85335210	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	85795307	85795307	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	86094573	86094573	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	87416977	87416977	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	87807269	87807269	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	87845632	87845632	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	87846879	87846879	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	88108682	88108682	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	88173621	88173621	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	88344180	88344180	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	88371028	88371028	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	88601107	88601107	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	88633863	88633863	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	89484035	89484035	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	89525311	89525311	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	89551392	89551392	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	90216556	90216556	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	90506156	90506156	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	90508625	90508625	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	90523064	90523064	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	90527176	90527176	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	90620887	90620887	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	90719269	90719269	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	90763640	90763640	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	91057554	91057554	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	92295011	92295011	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	92354325	92354325	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	92782543	92782543	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	94399893	94399893	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	9660103	9660103	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	96846138	96846138	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	97388624	97388624	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	97397091	97397091	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	97397531	97397531	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	97659322	97659322	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	98005556	98005556	+	IGR	SNP	G	A	A	rs75422107	byFrequency;by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	98206614	98206615	+	IGR	DNP	TA	CT	CT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	98258633	98258633	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	98353983	98353983	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	98362288	98362288	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	98436460	98436460	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	98543966	98543966	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	98607914	98607914	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	98670533	98670533	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	98757713	98757713	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	103108122	103108122	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	103120128	103120129	+	IGR	DNP	GG	TT	TT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	103377537	103377537	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	103381435	103381435	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	103591055	103591055	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	103977153	103977153	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	104003815	104003815	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	104045440	104045440	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	104057761	104057761	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	104155829	104155829	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	104161858	104161858	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	104224535	104224535	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	104516454	104516454	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	104987974	104987974	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	105216961	105216961	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	105312956	105312956	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	105654632	105654632	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	106295573	106295573	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	106758616	106758617	+	IGR	INS	-	AG	AG	rs141998245	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	107410710	107410710	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	107758798	107758798	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	107782362	107782362	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	108602726	108602726	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	109003127	109003127	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	110278802	110278802	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	110630124	110630124	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	110682810	110682810	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	111624171	111624171	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	19240461	19240461	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	19255907	19255907	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	19457520	19457520	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	19579231	19579231	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	19957003	19957003	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	19985201	19985201	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	20144382	20144382	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	22359328	22359328	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	23282167	23282167	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	23682467	23682467	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	29140702	29140702	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	29174111	29174111	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	29562295	29562295	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	30335856	30335856	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	33507786	33507786	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	33553339	33553339	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	33567578	33567578	+	IGR	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	33666322	33666322	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	34691335	34691335	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	35329473	35329473	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	37290828	37290828	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	37512555	37512555	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	38559683	38559683	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	39784955	39784955	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	40732132	40732132	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	41620509	41620509	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	43385560	43385560	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	45437596	45437596	+	IGR	SNP	C	T	T	rs112290941	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	46480601	46480601	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	48193138	48193139	+	IGR	DNP	GG	TT	TT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	48325505	48325505	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	48358113	48358113	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	51253229	51253229	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	51253231	51253231	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	51735941	51735941	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	51752121	51752121	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	53709687	53709687	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	53719512	53719512	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	53728297	53728297	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	53983848	53983848	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	54085637	54085637	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	55515422	55515422	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	57407497	57407497	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	57889088	57889088	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	57935741	57935741	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	58310517	58310517	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	58330971	58330971	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	59013163	59013163	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	59058591	59058591	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	59661402	59661402	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	59995042	59995042	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	60891725	60891725	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	61781517	61781517	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	61802218	61802218	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	62749822	62749822	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	63102185	63102185	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	63159690	63159690	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	63290942	63290942	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	63590295	63590295	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	63907274	63907274	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	64756438	64756438	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	64814820	64814820	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	65532475	65532475	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	66758883	66758883	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	68290719	68290719	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	68295632	68295632	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	68654260	68654260	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	71498089	71498089	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	71604701	71604701	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	71606892	71606892	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	71925806	71925806	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	72454506	72454506	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	72802503	72802503	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	73674735	73674735	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	73760393	73760393	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	74177411	74177411	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	74920901	74920901	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	74931357	74931357	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	75581499	75581499	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	75721996	75721996	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	75757599	75757599	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	76437298	76437298	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	76655001	76655001	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	76817160	76817160	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	76997020	76997020	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	77077986	77077986	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	77272770	77272770	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	77352699	77352699	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	77524358	77524358	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	79413744	79413744	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	79664696	79664696	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	80731907	80731907	+	IGR	SNP	T	C	C	rs140643046	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	81757247	81757247	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	81943016	81943016	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	82035217	82035217	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	82328796	82328796	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	82332382	82332382	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	82644809	82644809	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	83836395	83836395	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	83938233	83938233	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	84992374	84992374	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	86138842	86138842	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	86927708	86927708	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	86929427	86929427	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	87021648	87021648	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	87245571	87245571	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	87871437	87871437	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	87971797	87971797	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	87971866	87971866	+	IGR	SNP	C	G	G	rs151013689		TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	88357876	88357877	+	IGR	DNP	GA	TT	TT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	88544113	88544113	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	88742653	88742653	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	89466619	89466619	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	89678356	89678356	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	89951495	89951495	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	90470533	90470533	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	90700440	90700440	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	91049119	91049119	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	91096910	91096910	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	93658290	93658290	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	93774941	93774941	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	97525650	97525650	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	101475269	101475269	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	101778514	101778514	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	101894479	101894479	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	104713581	104713581	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	104757048	104757048	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	19114458	19114458	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	19114485	19114485	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	19123555	19123555	+	IGR	DEL	C	-	-	rs147356645	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	19123670	19123670	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	19152338	19152338	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	19413148	19413148	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	19500146	19500146	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	19500188	19500188	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20097251	20097251	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20137120	20137120	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20265077	20265077	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20409411	20409411	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20418302	20418302	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20697623	20697623	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	25159787	25159787	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	25200599	25200600	+	IGR	DNP	GG	CT	CT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	25247596	25247596	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	25635021	25635021	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	25644112	25644112	+	IGR	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	25736335	25736336	+	IGR	INS	-	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	25860860	25860860	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	25899751	25899751	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	26388822	26388822	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	26488815	26488815	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	26566025	26566025	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	26665694	26665694	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	26721480	26721480	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	26752063	26752063	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	26753514	26753514	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	27077567	27077567	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	27314311	27314311	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	28184532	28184532	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	28661293	28661293	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	28680849	28680849	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	28713684	28713684	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	29002181	29002181	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	30487129	30487129	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	30681516	30681516	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	30860782	30860782	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	34278817	34278817	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	38572798	38572798	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	38799472	38799472	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	39000034	39000034	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	39000602	39000602	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	39003744	39003744	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	39101114	39101114	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	39917035	39917035	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	41681146	41681146	+	IGR	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	41810881	41810881	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	42672507	42672507	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	43744508	43744508	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	44408898	44408898	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	44586740	44586740	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	44682617	44682617	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	44760235	44760235	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	45733411	45733411	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	46301158	46301158	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	46675050	46675050	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	47156143	47156143	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	48149145	48149145	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	48532721	48532721	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	48754321	48754321	+	IGR	DEL	G	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	48754638	48754638	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	48959182	48959182	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	49174249	49174249	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	49253979	49253979	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	49509410	49509410	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	49514211	49514211	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	49527513	49527513	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	49529286	49529286	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	49707461	49707461	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	49803915	49803915	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	51702987	51702987	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	52294944	52294944	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	52581140	52581140	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	52581214	52581214	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	52622504	52622504	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	52622663	52622663	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	52714228	52714228	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	52841085	52841085	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	53711418	53711418	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	54034120	54034120	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	54291070	54291070	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	54303844	54303844	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	54378519	54378519	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	54725106	54725106	+	IGR	DEL	G	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	55278831	55278831	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	57514483	57514483	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	57514492	57514492	+	IGR	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	57560672	57560672	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	57965029	57965029	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	57999476	57999476	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	58114627	58114627	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	58372218	58372218	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	59053472	59053472	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	59539745	59539745	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	59612124	59612124	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	59988248	59988248	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	60383002	60383002	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	60679200	60679200	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	60960746	60960746	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	62127678	62127678	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	62358123	62358123	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	62602798	62602798	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	62924952	62924952	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	63163397	63163397	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	63624203	63624203	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	65746370	65746370	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	66239022	66239022	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	66629569	66629569	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	69649253	69649253	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	70306980	70306980	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	71036846	71036847	+	IGR	DEL	TT	-	-	rs111462504		TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	71659647	71659647	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	74855319	74855319	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	75402550	75402550	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	76775697	76775697	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	77145229	77145229	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	78562209	78562209	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	78590609	78590609	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	78617261	78617261	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	80605005	80605005	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	82163246	82163246	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	82289493	82289493	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	82307409	82307409	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	82309797	82309797	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	82326464	82326464	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	82426634	82426634	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	82431517	82431517	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	82492090	82492090	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	82548223	82548223	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	82792344	82792344	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	82931440	82931440	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	83258011	83258011	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	83393260	83393260	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	83393279	83393279	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	83640564	83640564	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	83760661	83760661	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	83957703	83957703	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	84008135	84008135	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	84425182	84425182	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	84495231	84495231	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	84640081	84640081	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	84700872	84700872	+	IGR	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	84877130	84877130	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	85700752	85700752	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	85831144	85831144	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	86447466	86447466	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	86641152	86641152	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	87130358	87130358	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	87198709	87198709	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	87296800	87296800	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	87308541	87308541	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	87348393	87348393	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	87705556	87705556	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	87901177	87901177	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	88183555	88183555	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	88287858	88287858	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	89387873	89387873	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	89398945	89398945	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	91305025	91305025	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	91549760	91549760	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	92688149	92688149	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	94862882	94862882	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	95267815	95267815	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	96227806	96227806	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	96408668	96408668	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	96565783	96565783	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	97095822	97095822	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	97697196	97697196	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	97748738	97748738	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	97759437	97759437	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	97760094	97760094	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	97866392	97866392	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	97939236	97939236	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	97980134	97980134	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	98022908	98022908	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	98080728	98080728	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	98092321	98092321	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	98190603	98190603	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	98338502	98338502	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	98679064	98679064	+	IGR	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	99233742	99233742	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	102416552	102416552	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	20446057	20446057	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	20468099	20468099	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	20506229	20506229	+	IGR	SNP	G	A	A	rs116894671	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	22435063	22435063	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	22465877	22465877	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	24026675	24026675	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	24277950	24277950	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	24967911	24967911	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	25895548	25895548	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	26410956	26410956	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	26609372	26609372	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	27988914	27988914	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	29883898	29883898	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	32293155	32293155	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	33492871	33492871	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	33577764	33577764	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	34815496	34815496	+	IGR	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	36331748	36331748	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	37955889	37955889	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	39099625	39099625	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	45182940	45182940	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	46023341	46023341	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	47071471	47071471	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	49947673	49947673	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	53304309	53304309	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	53365607	53365607	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	53619492	53619492	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	54977837	54977837	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	55372347	55372347	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	58062539	58062539	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	60400825	60400825	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	60425388	60425388	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	61695390	61695390	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	61740272	61740272	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	62107004	62107004	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	63686441	63686441	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	69359347	69359347	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	69929911	69929911	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	70044131	70044131	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	70672715	70672715	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	71428793	71428793	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	73145221	73145221	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	74134442	74134442	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	74430044	74430044	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	78094701	78094701	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	78985415	78985415	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	80003725	80003725	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	82090325	82090325	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	82100976	82100976	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	82161968	82161968	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	84774453	84774453	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	87807527	87807527	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	88288747	88288747	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	88301527	88301527	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	88841892	88841892	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	88918474	88918474	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	88926631	88926631	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	89034708	89034708	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	92166169	92166169	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	92881311	92881311	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	93055049	93055049	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	93671297	93671297	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	94521100	94521100	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	94758234	94758234	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	95294714	95294714	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	95590075	95590075	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	95752641	95752641	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	96216206	96216206	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	96262335	96262336	+	IGR	DNP	CC	AA	AA			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	96388677	96388677	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	96413968	96413968	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	96989388	96989388	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	97705466	97705466	+	IGR	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	97927859	97927859	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	98107149	98107149	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	98740988	98740988	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	13434667	13434667	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	17841429	17841429	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	17939772	17939772	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	20312058	20312058	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	20521223	20521223	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	22590873	22590873	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	22629722	22629722	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	23279288	23279288	+	IGR	SNP	C	A	A	rs141246369	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	26322447	26322447	+	IGR	SNP	A	C	C	rs3055396		TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	26870650	26870650	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	26871034	26871034	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	26920138	26920138	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	26939544	26939544	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	31612968	31612968	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32004733	32004733	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32403550	32403550	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32616201	32616201	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32621945	32621945	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32926311	32926311	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33044608	33044608	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33453659	33453659	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33480960	33480960	+	IGR	SNP	T	C	C	rs142685387	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33605222	33605222	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33605661	33605661	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33781352	33781352	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33811370	33811370	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33939222	33939222	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33986868	33986868	+	IGR	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	34386545	34386545	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	34480859	34480859	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	34510981	34510981	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	34571136	34571136	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	46464012	46464012	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	46479043	46479043	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	48671655	48671655	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	49251794	49251794	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	52251599	52251599	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	54282089	54282089	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	55048528	55048528	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	55220725	55220725	+	IGR	SNP	G	A	A	rs149808698	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	55451362	55451362	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	5690358	5690358	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	59112839	59112839	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	60906050	60906050	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	61562864	61562864	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	61577150	61577150	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	62929512	62929512	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	63030542	63030542	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	63083186	63083186	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	63214538	63214538	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	63684412	63684412	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	63995109	63995109	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	64051907	64051907	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	65657097	65657097	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	65657171	65657171	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	65670396	65670396	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	65875120	65875120	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	65995233	65995233	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	66003487	66003487	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	66312231	66312231	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	72217091	72217091	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	73456156	73456156	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	73974756	73974756	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	76268994	76268994	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	76269212	76269212	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	78053288	78053288	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	79287364	79287364	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	79725148	79725148	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	79765647	79765647	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	79792724	79792724	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	79857588	79857588	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	79990394	79990394	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	80174600	80174600	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	81428518	81428518	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	82296406	82296406	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	82490613	82490613	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	85545929	85545929	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	86781903	86781903	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	88282486	88282486	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	11123709	11123709	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	12105219	12105219	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	12935101	12935101	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	14506736	14506736	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	14791495	14791495	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	21535271	21535271	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	25277975	25277975	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	25409776	25409776	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	2955288	2955288	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	29992294	29992294	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	30170414	30170414	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	32741413	32741413	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	32791074	32791074	+	IGR	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	33146951	33146951	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	33641121	33641121	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	34292582	34292582	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	39427401	39427401	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	43433156	43433156	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	48283427	48283427	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	49498225	49498225	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	49653556	49653556	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	50254311	50254311	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	50374399	50374399	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	50391262	50391262	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	50406288	50406288	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	50486982	50486982	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	51298107	51298107	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	51437594	51437595	+	IGR	DNP	GG	TT	TT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	51982042	51982042	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	52035234	52035234	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	52245278	52245278	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	53762749	53762749	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	53819930	53819930	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	53877606	53877606	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	54182939	54182939	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	54804187	54804187	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	55230279	55230280	+	IGR	INS	-	A	A	rs150352937	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	55889495	55889495	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	60320460	60320460	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	60361791	60361791	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	61028087	61028087	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	61069170	61069170	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	6169795	6169795	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	63391793	63391793	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	67579733	67579734	+	IGR	INS	-	T	T	rs68146049		TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	67694318	67694318	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	67706717	67706717	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	67713057	67713058	+	IGR	DNP	TT	AG	AG			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	67915773	67915773	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	6825545	6825545	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	68324648	68324648	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	68785303	68785303	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	68879941	68879941	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	68912039	68912039	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	68961421	68961421	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	68975707	68975707	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	69017579	69017579	+	IGR	SNP	C	A	A	rs115331978	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	69224169	69224169	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	69313429	69313429	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	69349654	69349654	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	69502229	69502229	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	69574563	69574563	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	70184345	70184345	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	75112555	75112555	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	8559038	8559038	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	10298922	10298922	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	11519455	11519455	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	11610061	11610061	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	13946926	13946926	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	14226173	14226173	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	14378640	14378640	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	14392821	14392821	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	14968705	14968705	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	15004461	15004461	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	1935442	1935442	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	19853429	19853429	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	19983330	19983330	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	22063801	22063801	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	22976170	22976170	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	23058795	23058795	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	25926717	25926717	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	26799069	26799069	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	28329407	28329407	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	3052355	3052355	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	33004628	33004628	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	33314911	33314911	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	35285940	35285940	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	35646886	35646886	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	35724087	35724087	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	38224318	38224318	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	38817561	38817561	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	39138293	39138293	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	39234881	39234881	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	39380638	39380638	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	40317646	40317646	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	40979626	40979626	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	42728646	42728646	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	44719417	44719417	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	4632879	4632879	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	4700721	4700721	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	47183692	47183692	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	4728441	4728441	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	49626293	49626293	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	49858920	49858920	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	5065732	5065732	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	5122728	5122728	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	51488088	51488088	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	5205383	5205383	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	5214172	5214172	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	52809299	52809299	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	5352035	5352035	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	53858016	53858016	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	53878522	53878522	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	54139067	54139067	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	54148123	54148123	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	54879306	54879306	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	55055285	55055285	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	5651199	5651199	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	56780490	56780490	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	57405119	57405119	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	57438975	57438975	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	57491280	57491280	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	57677529	57677529	+	IGR	SNP	G	T	T	rs61733379	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	57993061	57993061	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	58330433	58330433	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	59285646	59285646	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	59685981	59685981	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	61235832	61235832	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	62943261	62943261	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	64563068	64563068	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	64929699	64929699	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	65703002	65703002	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	67635326	67635326	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	67890287	67890287	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	68662707	68662707	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	68668016	68668016	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	7135560	7135560	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	73047410	73047410	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	73278080	73278080	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	73451229	73451229	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	73590892	73590892	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	75120695	75120695	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	76082207	76082207	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	8886506	8886506	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	15002837	15002837	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	15014463	15014463	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	16100766	16100766	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	20414153	20414153	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	21051288	21051288	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	22868885	22868885	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	23688126	23688126	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	28597328	28597328	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	29310522	29310522	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	29763130	29763130	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	30830343	30830343	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	31223685	31223685	+	IGR	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	31316457	31316457	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	31559974	31559974	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	31585947	31585947	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	31964500	31964500	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	32132627	32132627	+	IGR	SNP	C	A	A	rs150763940	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	32158272	32158272	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	32268690	32268690	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	32316619	32316619	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	32630459	32630459	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	32631465	32631465	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	35873226	35873226	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	35873228	35873228	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	35888955	35888955	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	42686719	42686719	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	44207237	44207237	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	44967434	44967434	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	52008463	52008463	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	55207913	55207913	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	57140531	57140531	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	57687166	57687166	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	101083260	101083260	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	101138838	101138838	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	101797241	101797241	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	102085445	102085445	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	102093606	102093606	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	102996503	102996503	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	104470338	104470338	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	104636134	104636134	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	105548427	105548427	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	105630582	105630582	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	106011899	106011899	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	106216198	106216199	+	IGR	DNP	CA	AG	AG			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	106833877	106833877	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	106891890	106891890	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	107098073	107098073	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	107128845	107128845	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	107540470	107540470	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	107546145	107546145	+	IGR	SNP	G	T	T	rs112639573		TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	108035881	108035881	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	108877187	108877187	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	109045483	109045483	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	110679237	110679237	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	111184391	111184391	+	IGR	SNP	T	A	A	rs2640495		TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	111464929	111464929	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	112696505	112696505	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	112777802	112777802	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	115641440	115641440	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	116092874	116092874	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	116093345	116093345	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	118088832	118088832	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	120111855	120111855	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	120629616	120629616	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	120634934	120634934	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	120690974	120690974	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	121142821	121142821	+	IGR	SNP	G	T	T	rs145152952	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	143516562	143516562	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	143540729	143540729	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	14656283	14656283	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	146572314	146572314	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	146582431	146582431	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	147285841	147285841	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	148848203	148848205	+	IGR	DEL	TCA	-	-	rs144912987		TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	148903072	148903072	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149037893	149037894	+	IGR	DNP	CC	AA	AA			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149096511	149096511	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149096547	149096547	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149099513	149099513	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149099515	149099515	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149101229	149101229	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149103173	149103173	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149341719	149341719	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149362401	149362402	+	IGR	DNP	GG	TT	TT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149726388	149726388	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	151308136	151308136	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	152076293	152076293	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	152157117	152157117	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	152451099	152451099	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	152912553	152912553	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	152930715	152930715	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	152996299	152996299	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	153262812	153262812	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	153359153	153359153	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	156633302	156633302	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	157043639	157043639	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	157202919	157202919	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	157595183	157595183	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	157629610	157629610	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	157815492	157815492	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	157934820	157934820	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	158133422	158133422	+	IGR	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	158411530	158411530	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	158442096	158442096	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	158494412	158494412	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	158494634	158494634	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	158507918	158507918	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	158694128	158694128	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	158694408	158694408	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	158750498	158750498	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	158825816	158825816	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	158836049	158836049	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	159056012	159056012	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	159127008	159127008	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	159554294	159554294	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	159974253	159974253	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	161526872	161526872	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	161570605	161570605	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	162889907	162889907	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	162955998	162955998	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	162967184	162967184	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	162995181	162995181	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	163053546	163053546	+	IGR	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	163226410	163226411	+	IGR	DNP	CC	AA	AA			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	163245056	163245056	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	163415562	163415562	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	163471565	163471565	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	163633893	163633893	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	163635269	163635269	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	163766010	163766010	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	163784356	163784356	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	163904897	163904897	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	163967751	163967751	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	163977506	163977506	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	164237056	164237056	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	164259176	164259176	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	164326863	164326863	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	164355061	164355061	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	164466568	164466568	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	164515780	164515780	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	164909207	164909207	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	165059770	165059770	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	165061959	165061959	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	165157483	165157483	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	165444346	165444346	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	165965361	165965361	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	165967879	165967879	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	165991963	165991963	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	165992189	165992189	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	166005450	166005450	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	166014716	166014716	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	166145684	166145684	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	166245881	166245881	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	166267131	166267131	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	166275944	166275944	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	166513554	166513554	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	166542428	166542428	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	166951644	166951644	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	167005811	167005812	+	IGR	INS	-	C	C	rs144345366	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	168338463	168338463	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	168565347	168565347	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	168617991	168617991	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	170163471	170163471	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	170168827	170168827	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	170397253	170397253	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	172753946	172753946	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	172974070	172974070	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	173190551	173190551	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	173673310	173673310	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	175235044	175235044	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	175239293	175239293	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	175743929	175743929	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	177443745	177443745	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	177610829	177610830	+	IGR	DNP	GG	AT	AT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	177780653	177780653	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	177788559	177788560	+	IGR	DNP	AG	CT	CT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	177849651	177849651	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	180585609	180585609	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	181267959	181267959	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	181886895	181886895	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	18217395	18217395	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	182594632	182594632	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	182743706	182743706	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	18422992	18422992	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	184332703	184332703	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	184350246	184350246	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	185517728	185517728	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	187001075	187001075	+	IGR	DEL	C	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	187114852	187114852	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	187211246	187211246	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	187438989	187438989	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	187566317	187566317	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	189268575	189268575	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	189660266	189660266	+	IGR	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	189971512	189971512	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	190829524	190829524	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	19116883	19116883	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	191332417	191332417	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	191522365	191522365	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	192537024	192537024	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	192563462	192563462	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	192685287	192685287	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	193340329	193340329	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	193379777	193379777	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	193448428	193448428	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	193460231	193460231	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	193767434	193767434	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	194629784	194629784	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	195159542	195159542	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	195358757	195358757	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	196026282	196026282	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	196131945	196131945	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	196177671	196177671	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	196991911	196991911	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	198309883	198309883	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	198531978	198531978	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	198587292	198587292	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	199133574	199133574	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	199488682	199488682	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	199623584	199623584	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	203389204	203389204	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	205298600	205298600	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	205462605	205462605	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	20791270	20791270	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	208488869	208488869	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	208622383	208622383	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	208735521	208735521	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	208773092	208773092	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	209347726	209347726	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	209666236	209666236	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	209851043	209851043	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	212293492	212293492	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	212881362	212881362	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	213532048	213532048	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	214326838	214326838	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	215000398	215000398	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	215427996	215427996	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	216622983	216622983	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	217345925	217345925	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	218724933	218724933	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	219069206	219069206	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	219751605	219751606	+	IGR	DNP	GG	TT	TT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	219765483	219765483	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	220490514	220490514	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	220614742	220614742	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	221307219	221307219	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	221436913	221436913	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	221953614	221953614	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	222427915	222427915	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	222497635	222497635	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	222524171	222524171	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	223085224	223085224	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	223223149	223223150	+	IGR	DNP	GG	TT	TT	rs78253472	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	223714962	223714962	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	224719917	224719917	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	226680769	226680769	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	22670310	22670310	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	229226111	229226111	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	229955923	229955923	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	232302966	232302966	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	232717084	232717084	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	232786996	232786996	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	232967576	232967576	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	233991083	233991083	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	235146123	235146123	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	238001988	238001988	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	238205712	238205712	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	238345526	238345526	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	238351262	238351262	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	238407603	238407603	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	238654851	238654851	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	239248162	239248162	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	240176245	240176245	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	240201193	240201193	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	242195791	242195791	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	242220218	242220218	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	242726866	242726866	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	243104130	243104130	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	247887236	247887236	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	247902345	247902345	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	248293126	248293126	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	248485934	248485934	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	248588726	248588726	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	248609894	248609894	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	248637734	248637734	+	IGR	SNP	G	C	C	rs148188422	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	248637798	248637798	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	29667911	29667911	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	30065644	30065644	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	30568753	30568753	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	30829730	30829730	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	31719770	31719770	+	IGR	SNP	T	C	C	rs143706943	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	33913884	33913884	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	35176697	35176697	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	35588004	35588004	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	37071778	37071778	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	37195682	37195682	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	37568434	37568434	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	38709898	38709898	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	38889866	38889866	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	40293872	40293872	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	41403839	41403839	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	42583082	42583082	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	42590754	42590754	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	4391609	4391609	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	4573402	4573402	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	48141507	48141507	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	48475638	48475638	+	IGR	SNP	A	G	G	rs71666648		TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	48718448	48718448	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	51997766	51997766	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	5219122	5219122	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	5350007	5350007	+	IGR	SNP	G	A	A	rs150470655	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	54487449	54487449	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	56031103	56031103	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	56897016	56897016	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	56956171	56956171	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	59726737	59726737	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	61069615	61069615	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	61075877	61075877	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	61380517	61380517	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	64796791	64796791	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	68113247	68113247	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	69260607	69260607	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	70996794	70996794	+	IGR	DEL	T	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	72753548	72753548	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	73163604	73163604	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	74432346	74432346	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	75028263	75028263	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	75312484	75312484	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	75330666	75330666	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	75640973	75640973	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	76518668	76518668	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	77168691	77168691	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	77190800	77190801	+	IGR	DNP	GG	TT	TT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	78933473	78933473	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	79136350	79136350	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	79336691	79336691	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	79481679	79481679	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	79520858	79520858	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	79820330	79820330	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	79903262	79903262	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	80917230	80917231	+	IGR	DNP	CA	AT	AT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	82732290	82732290	+	IGR	SNP	C	A	A	rs118081666	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	82754897	82754897	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	82857473	82857473	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	82857475	82857475	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	82958318	82958318	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	83147267	83147267	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	83944382	83944382	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	87642459	87642459	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	87937677	87937677	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	87960880	87960880	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	88425377	88425377	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	88447478	88447478	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	88590981	88590981	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	88627155	88627155	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	88702236	88702236	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	88709398	88709398	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	88744176	88744176	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	88888118	88888118	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	88925196	88925196	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	89797926	89797926	+	IGR	SNP	C	T	T	rs34497922		TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	90953189	90953189	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	91026220	91026220	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	95855596	95855596	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	95953142	95953142	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	96051378	96051379	+	IGR	DNP	GG	TT	TT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	96669997	96669997	+	IGR	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	96873090	96873090	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	98663646	98663646	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	99055172	99055172	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	99331124	99331124	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	10315449	10315450	+	IGR	DNP	GA	TT	TT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	11326229	11326229	+	IGR	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	11515010	11515010	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	11515300	11515300	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	11772760	11772760	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	11939950	11939950	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	11965275	11965275	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	12103084	12103084	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	12151366	12151366	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	12225089	12225089	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	12246627	12246627	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	12325744	12325744	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	12384179	12384179	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	12391012	12391012	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	12405603	12405603	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	12635854	12635854	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	12730326	12730326	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	12803761	12803761	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	12871880	12871881	+	IGR	DNP	CC	AA	AA			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	13661988	13661988	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	16771079	16771079	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	17168903	17168903	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	1771865	1771865	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	1798584	1798584	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	18846977	18846977	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	18944142	18944142	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	18962984	18962984	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	19117283	19117283	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	20950430	20950430	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	21095320	21095320	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	21401246	21401246	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	21782110	21782111	+	IGR	DNP	GG	CT	CT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	21792684	21792684	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	21845557	21845557	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	22029819	22029819	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	22503178	22503178	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	22710760	22710760	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	23255102	23255102	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	23269563	23269563	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	23766564	23766564	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	23791146	23791146	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	23813121	23813121	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	23813123	23813123	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	2437357	2437357	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	29432604	29432604	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	31799809	31799809	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	36055196	36055196	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	36231243	36231243	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	36268634	36268634	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	37824251	37824251	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	37944855	37944855	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	38064508	38064508	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	38089977	38089977	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	38090034	38090034	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	38167099	38167099	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	38226329	38226329	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	38236509	38236509	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	38547425	38547425	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	38868164	38868164	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	38987226	38987226	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	39381988	39381988	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	40567423	40567423	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	40624005	40624005	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	40673926	40673926	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	41859430	41859430	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	41871625	41871625	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	42475390	42475390	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	4262237	4262237	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	43488715	43488715	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	43888788	43888788	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	4389400	4389400	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	46636739	46636740	+	IGR	DNP	GG	CT	CT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	46788550	46788550	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	47060339	47060339	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	47096966	47096966	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	51122264	51122264	+	IGR	SNP	C	G	G	rs146134139	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	51447351	51447351	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	53059965	53059965	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	54048307	54048307	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	54384493	54384493	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	54647510	54647510	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	54701314	54701314	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	54707878	54707878	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	55375673	55375673	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	55469528	55469528	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	56308834	56308834	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	57753809	57753809	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	57840766	57840766	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	59470783	59470783	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	59524807	59524807	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	59564381	59564381	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	6476771	6476771	+	IGR	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	6899431	6899431	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	7015244	7015244	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	7475703	7475703	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	7695629	7695629	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	7849030	7849030	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	8998981	8998981	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	9028310	9028310	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	9473779	9473779	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	9836260	9836260	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	10085894	10085894	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	10420024	10420024	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	10429229	10429229	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	10614475	10614475	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	10743974	10743974	+	IGR	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	10862577	10862577	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	10887969	10887969	+	IGR	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	11111243	11111243	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	11122970	11122970	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	11180878	11180878	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	11181349	11181349	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	11181442	11181442	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	11181617	11181617	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	14367035	14367035	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	14803878	14803878	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	14939843	14939843	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	15851251	15851251	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	16472358	16472358	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	16724709	16724709	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	18157396	18157396	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	19009003	19009003	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	21878285	21878285	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	24475561	24475561	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	26291356	26291356	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	26614473	26614473	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	26821080	26821080	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	27228185	27228185	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	27951190	27951190	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	28266493	28266493	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	28639471	28639471	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	29380859	29380859	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	29971405	29971405	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	31318618	31318618	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	31403924	31403924	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	31720699	31720699	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	32289719	32289719	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	33433150	33433150	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	34289140	34289140	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	34353700	34353700	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	34359859	34359859	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	35570832	35570832	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	35600763	35600763	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	35603089	35603089	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	38023394	38023394	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	39330647	39330647	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	40064522	40064522	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	40097190	40097190	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	40294721	40294721	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	40901041	40901041	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	43606051	43606051	+	IGR	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	43892589	43892589	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	9420040	9420040	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	9576587	9576587	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	9668514	9668514	+	IGR	SNP	T	C	C	rs142494812	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	16349402	16349402	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	16388317	16388317	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	16413988	16413988	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	16487836	16487836	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	17358228	17358228	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	17708138	17708138	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	23702007	23702007	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	26482443	26482443	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	27302946	27302946	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	27474545	27474545	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	27808450	27808450	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	28093536	28093536	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	32396697	32396697	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	34884123	34884123	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	34985935	34985935	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	35539916	35539916	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	37245781	37245781	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	48392509	48392509	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	48516038	48516038	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	49508556	49508556	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	101042061	101042061	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	101308064	101308064	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	103866087	103866087	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	103885530	103885530	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	104026578	104026578	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	104034221	104034221	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	105141295	105141296	+	IGR	DNP	TT	AA	AA			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	105294969	105294969	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	105362573	105362574	+	IGR	DNP	GA	AT	AT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	105391225	105391225	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	105793334	105793334	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	106308366	106308366	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	106310382	106310382	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	106654381	106654381	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	107175637	107175638	+	IGR	DNP	TG	AT	AT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	107241037	107241037	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	107241122	107241122	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	107614730	107614730	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	112514705	112514705	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	113696713	113696713	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	113709900	113709900	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	114769792	114769792	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	11504637	11504637	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	115101926	115101926	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	116682128	116682128	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	116721158	116721158	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	116938376	116938376	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	117013373	117013373	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	117191019	117191019	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	117245087	117245087	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	117257136	117257136	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	117525631	117525631	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	117584220	117584221	+	IGR	DNP	CC	AA	AA			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	117639414	117639414	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	117696233	117696233	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	117718365	117718365	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	117745701	117745701	+	IGR	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	117991701	117991701	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	117994337	117994337	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	118354851	118354851	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	118422789	118422789	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	118909872	118909872	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	118954066	118954066	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	119047650	119047650	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	119086474	119086474	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	119456393	119456393	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	119566117	119566117	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	119848173	119848173	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	121817636	121817636	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	122916389	122916389	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	122922010	122922010	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	122998352	122998352	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	123162177	123162177	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	123394720	123394720	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	123450891	123450891	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	124453508	124453508	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	124520190	124520190	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	124558748	124558748	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	125696051	125696051	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	125813548	125813548	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	125813970	125813970	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	125878488	125878488	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	125933251	125933251	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	125962072	125962072	+	IGR	SNP	C	T	T	rs144640642	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	126070247	126070247	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	126246247	126246247	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	126505882	126505882	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	126664006	126664006	+	IGR	DEL	A	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	126932954	126932954	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	127180218	127180218	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	127181772	127181772	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	127339890	127339890	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	127393564	127393564	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	127395550	127395550	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	127397003	127397003	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	127588997	127588997	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	127697945	127697945	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	129207258	129207258	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	129558080	129558080	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	130052984	130052984	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	130261493	130261493	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	130987491	130987491	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	130988181	130988181	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	130988970	130988970	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	131220756	131220756	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	132181356	132181356	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	132859926	132859926	+	IGR	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	133045360	133045360	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	133046355	133046355	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	13308966	13308966	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	13315573	13315573	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	134488262	134488262	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	136957010	136957010	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	137155589	137155589	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	137481998	137481998	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	139686771	139686771	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	140566435	140566435	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	143095530	143095530	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	143258242	143258242	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	14562734	14562734	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	146074597	146074597	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	146840510	146840510	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	146840512	146840512	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	147275516	147275516	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	148361623	148361623	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	149130	149130	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	149621287	149621287	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	150608040	150608040	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	150635633	150635633	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	150969380	150969380	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	151565168	151565168	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	151569859	151569859	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	15266332	15266332	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	153079367	153079367	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	154007112	154007112	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	154227603	154227603	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	154253407	154253407	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	154277311	154277311	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	154496959	154496959	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	154512500	154512501	+	IGR	DNP	AG	TT	TT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	155923940	155923940	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	156051179	156051179	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	157165799	157165799	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	157743270	157743270	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	158236681	158236681	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	161911445	161911445	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	162359143	162359143	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	162360925	162360925	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	162363352	162363352	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	162982881	162982881	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	163720339	163720339	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	164820944	164820944	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	164869219	164869219	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	165097277	165097277	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	165150080	165150080	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	166572262	166572262	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	168288405	168288405	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	168664242	168664242	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	173528585	173528585	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	17465556	17465556	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	175174993	175174993	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	176528726	176528726	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	176531642	176531642	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	177896535	177896535	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	181531943	181531943	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	181577177	181577177	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	182275787	182275787	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	18229145	18229145	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	183394004	183394004	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	18357235	18357235	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	184240475	184240475	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	184988365	184988365	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	185412074	185412074	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	185854343	185854343	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	185987508	185987508	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	186108502	186108502	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	18668317	18668317	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	186829064	186829064	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	18709416	18709416	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	187689705	187689705	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	188095428	188095428	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	188859625	188859625	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	189753742	189753742	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	193770419	193770419	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	193781848	193781848	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	193893104	193893104	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	194575603	194575603	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	195706824	195706824	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	195839530	195839530	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	19799962	19799962	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	19830846	19830846	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	199257990	199257990	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	200127166	200127166	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	201153645	201153645	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	202769208	202769208	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	204628946	204628946	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	204890010	204890010	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	206695596	206695596	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	207873340	207873340	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	208950369	208950369	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	210132172	210132172	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	210611749	210611749	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	21215514	21215514	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	217453268	217453268	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	217631136	217631136	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	217690580	217690580	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	217833268	217833268	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	21967854	21967854	+	IGR	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	21967865	21967865	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	22032592	22032592	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	220947775	220947775	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	221301681	221301681	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	221423441	221423441	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	222210659	222210659	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	22250125	22250125	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	22312610	22312610	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	22374735	22374735	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	224237485	224237485	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	224247933	224247934	+	IGR	DNP	CC	TA	TA			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	22594006	22594006	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	226113977	226113977	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	22663407	22663407	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	226858614	226858614	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	226998421	226998421	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	22713526	22713526	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	227250053	227250053	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	22738649	22738649	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	22745793	22745793	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	23202051	23202051	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	23250647	23250647	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	23508880	23508880	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	235372280	235372280	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	235498830	235498830	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	237759280	237759280	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	239919850	239919850	+	IGR	SNP	T	A	A	rs71953313		TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	240401033	240401033	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	240855256	240855256	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	2515903	2515903	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	2647152	2647152	+	IGR	SNP	G	T	T	rs148539943	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	2727793	2727793	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	2854560	2854560	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	3142197	3142197	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	34010774	34010774	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	34011180	34011180	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	340420	340420	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	34213418	34213418	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	34503230	34503230	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	34657839	34657840	+	IGR	DNP	GG	TT	TT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	34790929	34790929	+	IGR	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	34895822	34895822	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	34956610	34956610	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	35013702	35013702	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	36145136	36145136	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	36527900	36527900	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	37653146	37653146	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	37759488	37759488	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	37928244	37928244	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	38513127	38513127	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	40038033	40038033	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	4135679	4135679	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	41601972	41601972	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	41721638	41721638	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	41786943	41786943	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	4402419	4402419	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	44254249	44254249	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	44321138	44321138	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	4562427	4562427	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	49162102	49162102	+	IGR	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	4947417	4947417	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	4951495	4951495	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	49564003	49564003	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	49686563	49686563	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	49790626	49790626	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	4992900	4992900	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	51621174	51621174	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	52946010	52946010	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	53228467	53228467	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	53737200	53737200	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	54635296	54635296	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	5586721	5586721	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	5660679	5660679	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	56708813	56708813	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	57017607	57017607	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	57023067	57023067	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	57624426	57624426	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	57935545	57935545	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	5811497	5811497	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	58492549	58492549	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	59514535	59514535	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	59530627	59530627	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	59750862	59750862	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	59842050	59842050	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	5985313	5985313	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	5992030	5992030	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	59957036	59957036	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	60017352	60017352	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	60020962	60020962	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	60057010	60057010	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	60494476	60494476	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	60576735	60576735	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	6058159	6058159	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	6062432	6062432	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	61069807	61069807	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	61826613	61826613	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	63317276	63317276	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	63317284	63317284	+	IGR	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	63911809	63911809	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	64482011	64482011	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	64482014	64482014	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	64636415	64636415	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	6553276	6553276	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	6692029	6692029	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	67806177	67806177	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	67871271	67871271	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	67902534	67902534	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	6805721	6805721	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	68133640	68133640	+	IGR	SNP	C	A	A	rs145749442	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	6920693	6920693	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	69893918	69893918	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	72040602	72040602	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	72118600	72118600	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	72340910	72340910	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	7354835	7354835	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	73981130	73981130	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	7414794	7414794	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	7443893	7443893	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	75267549	75267549	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	76186994	76186994	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	76252008	76252008	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	76325353	76325353	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	76573709	76573709	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	76700494	76700494	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	76899303	76899303	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	78188774	78188774	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	7830888	7830888	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	78615612	78615612	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	7866107	7866107	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	78817615	78817615	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	7884344	7884344	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	78875190	78875190	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	78955896	78955896	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	79326013	79326013	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	7940736	7940736	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	80885682	80885683	+	IGR	DNP	TG	CT	CT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	81640965	81640965	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	81691218	81691218	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	82707851	82707851	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	82968988	82968988	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	83030122	83030122	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	83961751	83961751	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	84106226	84106226	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	84112379	84112379	+	IGR	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	84268938	84268938	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	84630934	84630934	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	88509258	88509258	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91760180	91760180	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91773651	91773651	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91933195	91933195	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91953606	91953606	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	92084939	92084939	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	92090363	92090363	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	95619127	95619127	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	95619281	95619281	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	96726276	96726277	+	IGR	DNP	GG	TT	TT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	100319976	100319976	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	100909937	100909937	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	1022682	1022682	+	IGR	SNP	C	A	A	rs146210842	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	102362642	102362642	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	102666793	102666793	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	102700924	102700924	+	IGR	DEL	C	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	103620406	103620406	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	103913729	103913729	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	105314509	105314509	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	105724963	105724963	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	106019888	106019888	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	106073268	106073268	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	108486638	108486638	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	108953732	108953732	+	IGR	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	109464861	109464861	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	109635050	109635050	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	109641441	109641441	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	109693875	109693875	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	110327347	110327347	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	111029238	111029238	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	112807624	112807624	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	112854267	112854267	+	IGR	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	115108319	115108319	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	115241832	115241832	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	115517334	115517334	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	116304672	116304672	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	116339022	116339022	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	116365592	116365592	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	116500933	116500933	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	117102218	117102218	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	117470926	117470926	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	117508280	117508280	+	IGR	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	117517714	117517714	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	117863743	117863743	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	118074826	118074826	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	118217974	118217974	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	122766739	122766739	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	12308284	12308284	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	123741856	123741856	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	124794023	124794023	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	125496727	125496727	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	126954397	126954397	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	130017908	130017908	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	131233376	131233376	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	13203948	13203948	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	134400187	134400187	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	135300891	135300891	+	IGR	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	135356711	135356711	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	135479910	135479910	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	137157741	137157741	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	137201946	137201946	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	137285412	137285412	+	IGR	SNP	C	A	A	rs140909914	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	137329115	137329115	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	137368437	137368437	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	137368450	137368450	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	138985634	138985634	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	139123817	139123817	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	139456947	139456947	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	139515478	139515478	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	139620741	139620741	+	IGR	SNP	G	T	T	rs74604578	byFrequency;by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	139633999	139633999	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	140294770	140294770	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	140309106	140309106	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	140329550	140329550	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	140490134	140490134	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	140547164	140547164	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	140926454	140926454	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	142715679	142715679	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	142904186	142904186	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	142905084	142905084	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	144028564	144028564	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	144599573	144599573	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	144601102	144601102	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	144830085	144830085	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	145043552	145043552	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	145273876	145273876	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	145402830	145402830	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	145680107	145680107	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	145694286	145694286	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	146081437	146081437	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	146130128	146130128	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	146593872	146593872	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	146693630	146693630	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	146783039	146783039	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	147102900	147102900	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	147102902	147102902	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	147159891	147159891	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	147972981	147972981	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	148065235	148065235	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	148081782	148081782	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	148232091	148232091	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	149476216	149476216	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	151202124	151202124	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	151204603	151204603	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	152536214	152536214	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	152619606	152619606	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	153508083	153508083	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	153697655	153697655	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	153709878	153709878	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	15393840	15393840	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	154204488	154204488	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	154314337	154314337	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	154340217	154340217	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	157464440	157464440	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	157499713	157499713	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	160413873	160413873	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	161357411	161357411	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	161453099	161453099	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	161476973	161476973	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	161561630	161561630	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	161658153	161658153	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	162332002	162332002	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	163248126	163248127	+	IGR	DNP	GG	TT	TT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	163407262	163407262	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	163788199	163788199	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	164165197	164165197	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	164616540	164616540	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	164919464	164919465	+	IGR	DNP	CC	AG	AG			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	165621914	165621914	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	166207127	166207127	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	166207533	166207533	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	166225355	166225355	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	166783879	166783879	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	166941856	166941857	+	IGR	INS	-	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	167993521	167993521	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	168012458	168012458	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	168019789	168019789	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	168726241	168726241	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	171686601	171686601	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	172994687	172994687	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	172995907	172995907	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	173014468	173014468	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	173021645	173021645	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	174019927	174019927	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	175776364	175776364	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	175837631	175837631	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	177926931	177926931	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	178211167	178211168	+	IGR	DNP	CC	AT	AT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	178222983	178222983	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	17831488	17831488	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	179246731	179246731	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	17994717	17994717	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	179950268	179950268	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	180042942	180042942	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	180117734	180117734	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	180915179	180915179	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	182410066	182410066	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	18340864	18340864	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	183744538	183744538	+	IGR	DEL	T	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	184394767	184394767	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	18580673	18580673	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	186377027	186377027	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	187475429	187475429	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	18758141	18758141	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	187796296	187796296	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	189862440	189862440	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	19062961	19062961	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	191261838	191261838	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	19141603	19141603	+	IGR	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	192493467	192493467	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	192874263	192874263	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	192923938	192923938	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	1947619	1947619	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	195667345	195667345	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	195670637	195670637	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	22718114	22718114	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	22718236	22718236	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	22767091	22767091	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	22937370	22937370	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	24614807	24614807	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	25728468	25728468	+	IGR	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	26074081	26074082	+	IGR	DNP	CC	AG	AG			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	26155172	26155172	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	27014354	27014354	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	27105321	27105321	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	30950946	30950946	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	31481660	31481660	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	31527009	31527009	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	34122319	34122319	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	34340071	34340071	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	35384461	35384461	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	3639475	3639475	+	IGR	SNP	G	A	A	rs112804298		TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	36914320	36914320	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	39024233	39024233	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	46172189	46172189	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	472993	472993	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	54050188	54050188	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	54057253	54057253	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	55191919	55191919	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	5719909	5719909	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	6168677	6168677	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	6322880	6322880	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	65261022	65261022	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	68620407	68620407	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	70575675	70575675	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	71700459	71700459	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	72010975	72010975	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	72646664	72646664	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	73757726	73757726	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	73760483	73760483	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	73875035	73875035	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	73887672	73887672	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	74185492	74185492	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	74247885	74247885	+	IGR	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	74906286	74906286	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	74922467	74922467	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	75105458	75105458	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	75378985	75378985	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	76484327	76484327	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	78368663	78368663	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	80007161	80007161	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	80194341	80194341	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	80411571	80411571	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	81289926	81289926	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	82526879	82526879	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	82661928	82661928	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	83187758	83187758	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	83205052	83205052	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	83943226	83943226	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	84245994	84245994	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	84264542	84264542	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	85001112	85001112	+	IGR	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	87867605	87867605	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	88221935	88221935	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	88424507	88424507	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	88685201	88685201	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	88951466	88951466	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	88999102	88999102	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	89047923	89047923	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	89749338	89749338	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	90062831	90062832	+	IGR	DNP	CC	GG	GG			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	90306544	90306544	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	93979164	93979164	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	95081861	95081861	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	95430307	95430307	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	95670078	95670078	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	95781718	95781718	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	96268648	96268648	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	976888	976888	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	98113850	98113850	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	98777195	98777195	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	99088062	99088062	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	99099683	99099683	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	100912302	100912302	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	101006295	101006295	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	10412331	10412331	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	104124770	104124770	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	105297159	105297159	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	10731354	10731354	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	107558852	107558852	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	108335867	108335867	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	109228791	109228791	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	109379744	109379744	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	10948599	10948599	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	112737874	112737874	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	112832616	112832616	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	114371253	114371253	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	115155408	115155408	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	116316435	116316435	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	11644908	11644908	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	116902555	116902555	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	11808024	11808024	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	11826334	11826334	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	118366916	118366916	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	118530534	118530534	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	119409521	119409521	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	121373468	121373468	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	122430805	122430805	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	123623616	123623616	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	12462666	12462666	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	12637571	12637571	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	128279865	128279865	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	128333726	128333726	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	12930650	12930650	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	129311284	129311284	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	129452425	129452425	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	129471560	129471560	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	130107473	130107473	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	130176265	130176266	+	IGR	DNP	CC	AA	AA			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	13055081	13055081	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	131373558	131373558	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	13256380	13256380	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	132740908	132740908	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	133434234	133434234	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	133809778	133809778	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	134372483	134372483	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	134454388	134454388	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	134603284	134603284	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	13511819	13511819	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	135835735	135835735	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	136224187	136224187	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	136580344	136580345	+	IGR	DNP	TG	CT	CT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	136675713	136675714	+	IGR	DNP	GG	TT	TT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	137473941	137473941	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	137529851	137529851	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	137772352	137772352	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	137970553	137970553	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	137993480	137993480	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	138253401	138253401	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	138491814	138491814	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	14045465	14045465	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	14185936	14185937	+	IGR	DNP	CC	GA	GA			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	142373958	142373958	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	142486785	142486785	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	14409424	14409424	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	14418696	14418696	+	IGR	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	144618329	144618329	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	145446082	145446082	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	145493685	145493685	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	145518588	145518588	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	146988222	146988222	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	147169798	147169798	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	148380342	148380342	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	14902380	14902380	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	14902684	14902684	+	IGR	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	149527159	149527160	+	IGR	DNP	GG	TT	TT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	152936427	152936427	+	IGR	SNP	C	A	A	rs138663255	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	153141628	153141628	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	154025898	154025898	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	155020663	155020663	+	IGR	SNP	C	A	A	rs143116203	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	155848433	155848433	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	156035173	156035173	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	156741156	156741156	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	15756100	15756100	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	15769604	15769604	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	161960557	161960557	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	161963972	161963973	+	IGR	DNP	CG	AA	AA			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	162130100	162130100	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	163314307	163314307	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	163531663	163531663	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	163629026	163629026	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	165578089	165578089	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	166586785	166586785	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	167423777	167423777	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	167442313	167442313	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	167531796	167531796	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	167603612	167603612	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	168467482	168467482	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	17094629	17094629	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	171535730	171535730	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	171566474	171566474	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	17165273	17165273	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	171910163	171910163	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	172026582	172026583	+	IGR	DNP	GG	TT	TT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	17406687	17406687	+	IGR	SNP	T	C	C	rs140483358	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	174649123	174649123	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	174690770	174690770	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	176211015	176211015	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	176416743	176416743	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	177384797	177384797	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	179026132	179026132	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	179244138	179244138	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	179908260	179908261	+	IGR	DNP	GG	TT	TT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	180160079	180160079	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	180189427	180189427	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	180708496	180708496	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	181904510	181904510	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	181921179	181921179	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	182134210	182134210	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	182141424	182141424	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	18216349	18216349	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	18248069	18248069	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	18264708	18264708	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	18265220	18265221	+	IGR	DNP	GG	TT	TT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	182777177	182777177	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	183028262	183028262	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	18386292	18386292	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	18703385	18703385	+	IGR	SNP	G	T	T	rs62041420		TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	18764681	18764681	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	187779220	187779220	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	18813009	18813009	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	188217509	188217509	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	190202757	190202757	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	190711989	190711990	+	IGR	DNP	TG	CT	CT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	19430536	19430536	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	19725885	19725885	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	19737985	19737985	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	20107783	20107783	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	20146546	20146546	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	20193149	20193149	+	IGR	SNP	T	G	G	rs117998693	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	20645422	20645422	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	22060134	22060134	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	22217838	22217838	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	22871802	22871802	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	23301995	23301995	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	23395451	23395451	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	23423952	23423952	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	23981522	23981522	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	24111762	24111763	+	IGR	DNP	CC	AA	AA			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	24387001	24387001	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	25888283	25888283	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	26481435	26481435	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	27441204	27441204	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	28444104	28444104	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	29137773	29137773	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	29998492	29998492	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	31769163	31769164	+	IGR	INS	-	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	32325284	32325284	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	32406487	32406487	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	34640893	34640893	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	35586905	35586905	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	37034388	37034388	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	38767579	38767579	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	3919614	3919614	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	3921365	3921365	+	IGR	SNP	C	A	A	rs117520089	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	3924071	3924071	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	41754094	41754094	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	41844131	41844131	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	42750365	42750365	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	43477552	43477552	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	45299273	45299273	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	45393045	45393045	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	45837632	45837632	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	46410463	46410463	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	46516900	46516900	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	46573436	46573436	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	47020783	47020783	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	47071	47071	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	49512254	49512254	+	IGR	SNP	T	G	G	rs4350992		TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	52807040	52807040	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	53717785	53717785	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	55613939	55613939	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	55901807	55901807	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	55908442	55908442	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	56050633	56050633	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	58882525	58882525	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	59204146	59204146	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	59884148	59884148	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	60691000	60691000	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	60733371	60733371	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	61468922	61468922	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	61934858	61934858	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	61987704	61987704	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	62971505	62971505	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	63016649	63016649	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	63402903	63402903	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	64141816	64141816	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	64202936	64202936	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	64330815	64330815	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	64735490	64735490	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	64744715	64744715	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	64759473	64759473	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	66677376	66677376	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	67326898	67326898	+	IGR	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	67648827	67648827	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	67744588	67744588	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	67744590	67744590	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	67884009	67884009	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	68162973	68162973	+	IGR	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	69403562	69403562	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	69480350	69480350	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	69894136	69894136	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	70212906	70212906	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	70265389	70265389	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	70283786	70283786	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	82154436	82154436	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	82800007	82800007	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	86291049	86291049	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	90123026	90123026	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	9036310	9036310	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	90888115	90888115	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	93057091	93057091	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	94704148	94704148	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	95012540	95012540	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	96575055	96575055	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	96806558	96806558	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	97851569	97851569	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	98000710	98000710	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	99384493	99384493	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	101181996	101181996	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	101656131	101656131	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	102671992	102671992	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	102674259	102674259	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	103945773	103945773	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	105041634	105041634	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	106425103	106425103	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	106430538	106430538	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	106467816	106467816	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	108573489	108573489	+	IGR	SNP	G	C	C	rs77963149	byFrequency;by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	108625899	108625899	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	109365948	109365948	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	109380051	109380051	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	109604004	109604004	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	110284283	110284283	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	110285610	110285610	+	IGR	SNP	G	C	C	rs145371645	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	114734331	114734331	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	115014874	115014874	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	115387611	115387611	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	116540429	116540429	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	117105017	117105017	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	117114876	117114876	+	IGR	DEL	A	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	117318469	117318469	+	IGR	SNP	T	C	C	rs77107565	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	117909123	117909123	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	119223080	119223080	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	120795084	120795084	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	120982139	120982139	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	121152456	121152456	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	121191297	121191297	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	12139017	12139017	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	121957788	121957788	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	12309165	12309165	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	12339093	12339093	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	123416355	123416355	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	12381072	12381072	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	123819928	123819928	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	124366994	124366994	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	125203351	125203351	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	126496235	126496235	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	127975581	127975581	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	129855274	129855274	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	13175664	13175664	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	13447695	13447695	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	13525510	13525510	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	136247048	136247048	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	13634958	13634958	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	13638240	13638240	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	142645074	142645074	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	144015156	144015156	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	144117387	144117387	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	144547771	144547771	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	144987883	144987883	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	145286500	145286500	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	145962451	145962451	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	146552018	146552018	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	147292787	147292787	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	148455232	148455232	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	148455618	148455618	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	15067866	15067866	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	15071673	15071673	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	15087561	15087561	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	151924694	151924694	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	152421326	152421326	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	153487564	153487564	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	153536271	153536271	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	15450866	15450867	+	IGR	DNP	GG	AT	AT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	15450996	15450996	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	154941307	154941307	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	156214737	156214737	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	157414133	157414133	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	160466975	160466976	+	IGR	DNP	GG	TT	TT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	161178667	161178667	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	161178810	161178810	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	161347298	161347298	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	16245297	16245297	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	16264547	16264547	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	16308323	16308323	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	163105495	163105495	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	163245654	163245654	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	164202276	164202276	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	164679267	164679267	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	164841639	164841639	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	164895217	164895217	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	165210142	165210142	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	165301711	165301711	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	165580859	165580859	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	165727413	165727413	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	165989982	165989982	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	166026209	166026209	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	166272761	166272761	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	168913958	168913958	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	170980719	170980719	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	171111572	171111572	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	172015482	172015482	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	173545073	173545073	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	173614618	173614618	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	173638106	173638106	+	IGR	SNP	G	T	T	rs78651531	byFrequency;by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	173809999	173809999	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	174552772	174552772	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	17462079	17462079	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	17462081	17462081	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	174638069	174638069	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	174686365	174686365	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	174734069	174734069	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	17473947	17473947	+	IGR	DEL	C	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	174888623	174888623	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	175020509	175020509	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	175323116	175323116	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	17648987	17648987	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	17759913	17759913	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	18049972	18049972	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	18307726	18307726	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	18798452	18798452	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	20037167	20037167	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	20372573	20372573	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	20458493	20458493	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	21121307	21121308	+	IGR	INS	-	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	21266053	21266053	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	22968347	22968347	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	23304812	23304812	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	24654249	24654249	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	25017551	25017551	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	25175625	25175625	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	25179100	25179100	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	2545319	2545319	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	25909601	25909601	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	26052917	26052917	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	26052919	26052919	+	IGR	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	26223027	26223027	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	27799093	27799093	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	28046525	28046525	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	28180711	28180711	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	28708523	28708523	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	2897651	2897651	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	29274100	29274100	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	29384216	29384216	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	29391500	29391500	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	29498414	29498414	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	29771195	29771195	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	29771351	29771351	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	29773051	29773051	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	30276259	30276259	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	30362099	30362100	+	IGR	DNP	CC	AA	AA			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	30415999	30415999	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	30621224	30621224	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	30781387	30781387	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	30840283	30840283	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	30840321	30840321	+	IGR	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	30944182	30944182	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	3094559	3094559	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	31092511	31092511	+	IGR	DEL	G	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	3212476	3212476	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	32523601	32523601	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	32797742	32797742	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	32806447	32806447	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	32821467	32821467	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	32913833	32913833	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	33090280	33090280	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	33104981	33104981	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	33216280	33216280	+	IGR	DEL	T	-	-	rs11303391		TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	33216449	33216449	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	33305409	33305409	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	3368962	3368962	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	34277034	34277034	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	35300925	35300925	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	35301638	35301638	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	35430505	35430505	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	3623343	3623343	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	36725576	36725576	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	37890161	37890161	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	37902883	37902883	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	37990124	37990124	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	38006779	38006779	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	38011741	38011741	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	38046579	38046579	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	38069642	38069642	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	38680358	38680358	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	39433831	39433831	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	39543768	39543768	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	39741164	39741164	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	39815932	39815932	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	39850779	39850779	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	40023325	40023325	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	40143019	40143019	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	40452662	40452662	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	4076779	4076779	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	41280810	41280810	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	41524010	41524010	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	41587592	41587592	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	41685991	41685991	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	41697868	41697868	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	41951517	41951517	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	42047705	42047705	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	42151326	42151326	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	42281282	42281282	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	42349176	42349176	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	43748461	43748461	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	44114023	44114023	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	44264664	44264664	+	IGR	SNP	C	A	A	rs75845477	byFrequency;by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	44468270	44468270	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	44468428	44468428	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	44679717	44679717	+	IGR	DEL	C	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	45018905	45018905	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	45117144	45117144	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	45140332	45140332	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	45236011	45236011	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	45247451	45247451	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	45838679	45838679	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	45852421	45852421	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	46133179	46133179	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	4659324	4659324	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	4893451	4893451	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	49833547	49833547	+	IGR	SNP	G	T	T	rs144821492	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	49837536	49837536	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	50168939	50168939	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	50789942	50789942	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	50855936	50855936	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	50949370	50949370	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	5117686	5117686	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	52265272	52265272	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	52563665	52563665	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	5503399	5503399	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	5514735	5514735	+	IGR	SNP	C	G	G	rs144442468	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	56665045	56665045	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	56718971	56718971	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	5678187	5678187	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	57029264	57029264	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	57128973	57128973	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	5754015	5754015	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	57592578	57592578	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	5793267	5793267	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	5864745	5864745	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	5977890	5977890	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	6038451	6038451	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	6062067	6062068	+	IGR	DNP	CC	AG	AG			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	6119288	6119288	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	6178219	6178219	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	62278410	62278410	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	62434226	62434226	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	62924607	62924607	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	63124993	63124993	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	63712101	63712101	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	65541481	65541481	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	66887000	66887000	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	67892789	67892789	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	68055344	68055344	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	6952184	6952184	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	6957068	6957068	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	6978013	6978013	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	6990575	6990575	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	7012464	7012464	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	7043066	7043066	+	IGR	DEL	C	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	7067284	7067284	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	7096273	7096273	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	71258448	71258448	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	72559382	72559383	+	IGR	DNP	CC	AG	AG			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	72739052	72739052	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	7348234	7348234	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	73846665	73846665	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	74240201	74240201	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	74286286	74286286	+	IGR	SNP	G	A	A	rs111479137	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	75019111	75019111	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	75120111	75120111	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	75245677	75245677	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	75373800	75373800	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	76841939	76841939	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	77227970	77227970	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	7991515	7991515	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	80198799	80198799	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	8089002	8089002	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	81072431	81072431	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	8162105	8162105	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	8166788	8166788	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	81759972	81759972	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	81817932	81817932	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	82085666	82085666	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	8212132	8212132	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	8212590	8212590	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	82131327	82131327	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	83855153	83855153	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	84760656	84760656	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	84760733	84760733	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	85220197	85220197	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	85383462	85383462	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	8571476	8571476	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	86023401	86023401	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	87044609	87044609	+	IGR	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	87456400	87456400	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	8775767	8775767	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	87761427	87761427	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	87988873	87988873	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	88436338	88436338	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	88686151	88686151	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	8897594	8897594	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	8903631	8903631	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	8981819	8981819	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	90621085	90621085	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	92654873	92654873	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	93472697	93472697	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	9571338	9571338	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	97361982	97361982	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	97674935	97674935	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	97675503	97675503	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	97692311	97692311	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	97897965	97897965	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	98080992	98080992	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	98523828	98523828	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	98702322	98702322	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	98869608	98869608	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	99284593	99284593	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	9978021	9978021	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	10217598	10217598	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	102755701	102755701	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	103283565	103283565	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	104308979	104308979	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	104496208	104496208	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	104702445	104702445	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	106022620	106022620	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	106338730	106338730	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	109012481	109012481	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	112329236	112329236	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	112931673	112931673	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	113688393	113688393	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	11413254	11413254	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	114217516	114217516	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	114714790	114714790	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	115571819	115571819	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	115717172	115717172	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	116018160	116018160	+	IGR	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	116074280	116074280	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	116221279	116221279	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	117542745	117542745	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	118131980	118131980	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	118195092	118195092	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	120122875	120122876	+	IGR	DNP	TG	AT	AT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	121247581	121247581	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	122004608	122004608	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	122232535	122232535	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	122644135	122644135	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	125755797	125755797	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	125842747	125842747	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	131041472	131041472	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	132283187	132283187	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	132401746	132401746	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	132607041	132607041	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	132743452	132743452	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	132744990	132744990	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	132931530	132931530	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	1402556	1402556	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	140642023	140642023	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	144534722	144534722	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	14507848	14507848	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	146821543	146821543	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	146886756	146886756	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	14732200	14732200	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	14748013	14748013	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	149459645	149459645	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	153202085	153202085	+	IGR	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	153202104	153202104	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	156527332	156527332	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	156792799	156792799	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	156854699	156854699	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	156973715	156973715	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	1591828	1591828	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	164059719	164059719	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	164937415	164937415	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	165521196	165521196	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	165583734	165583734	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	165685665	165685665	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	168155509	168155509	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	17587416	17587416	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	18367789	18367789	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	18509073	18509073	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	18761287	18761287	+	IGR	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	18792302	18792302	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	19349049	19349049	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	20001901	20001901	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	22626445	22626445	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	23012565	23012565	+	IGR	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	23402244	23402244	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	23584682	23584682	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	2370256	2370256	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	24798212	24798212	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	26031808	26031808	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	26688045	26688045	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	27276801	27276801	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	27491461	27491461	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	27979558	27979558	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	28659453	28659453	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	29148053	29148053	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	29218890	29218890	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	29230486	29230486	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	30735453	30735453	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	30933314	30933314	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	30991897	30991897	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	32675870	32675870	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	33298589	33298589	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	33977386	33977386	+	IGR	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	34549799	34549799	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	3611120	3611120	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	3878458	3878458	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	40754445	40754445	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	40923985	40923985	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	41265214	41265214	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	4373747	4373747	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	44570421	44570421	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	4471243	4471243	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	4593763	4593763	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	46173114	46173114	+	IGR	DEL	G	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	466754	466754	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	47383889	47383889	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	48236392	48236392	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	48458924	48458924	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	49174287	49174287	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	49289073	49289073	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	51183637	51183637	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	51400613	51400613	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	54285925	54285925	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	54326538	54326538	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	55298287	55298287	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	57545857	57545857	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	57565346	57565346	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	57975235	57975235	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	57975469	57975469	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	5846030	5846030	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	58572713	58572713	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	58573659	58573659	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	58583183	58583183	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	58641298	58641298	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	6037787	6037787	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	6044936	6044936	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	6133923	6133923	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	62310871	62310871	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	63503166	63503166	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	66791786	66791786	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	66795331	66795331	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	66835972	66835972	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	67817242	67817242	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	70351352	70351352	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	71075010	71075010	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	71874887	71874888	+	IGR	DNP	TG	AT	AT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	72271668	72271668	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	7482886	7482886	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	75771025	75771025	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	77553217	77553217	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	78248620	78248620	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	78400743	78400743	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	78497265	78497265	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	78788884	78788884	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	79094297	79094297	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	79845404	79845404	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	80036722	80036722	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	81197495	81197495	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	8207784	8207784	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	8208782	8208782	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	82229156	82229156	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	8286583	8286583	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	83039316	83039316	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	83350921	83350921	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	8362389	8362389	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	84990681	84990681	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	84997860	84997860	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	85053727	85053727	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	85091550	85091550	+	IGR	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	85139544	85139544	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	85186911	85186911	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	85386754	85386754	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	85551073	85551073	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	85621437	85621437	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	85669758	85669758	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	85698670	85698670	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	85712206	85712206	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	86380439	86380439	+	IGR	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	86834997	86834997	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	87219790	87219790	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	88646910	88646910	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	91388062	91388062	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	91401461	91401461	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	9332228	9332228	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	93334483	93334483	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	93736389	93736389	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	94325095	94325095	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	94748507	94748507	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	95652008	95652008	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	96887640	96887640	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	98375771	98375771	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	98375779	98375779	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	99251969	99251969	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	100531349	100531349	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	10604199	10604199	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	106451195	106451195	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	108389842	108389842	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	108635010	108635010	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	109673708	109673708	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	109831698	109831698	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	110053744	110053744	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	110069536	110069537	+	IGR	INS	-	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	111243655	111243655	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	111268504	111268504	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	11259582	11259582	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	113159882	113159882	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	113578423	113578424	+	IGR	DNP	CC	AA	AA			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	114800956	114800956	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	117748891	117748891	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	118440647	118440647	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	119067898	119067898	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	119699330	119699330	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	120956151	120956151	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	121469587	121469587	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	122870447	122870447	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	122984967	122984967	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	123043682	123043682	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	124274700	124274700	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	125410580	125410580	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	12757100	12757100	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	130620667	130620667	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	131540737	131540737	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	132431052	132431052	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	132854300	132854300	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	134116666	134116666	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	13529368	13529368	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	135452913	135452913	+	IGR	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	135691011	135691011	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	135693532	135693532	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	135711450	135711450	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	135711875	135711875	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	135875817	135875817	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	136483766	136483766	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	13764828	13764828	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	137809176	137809176	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	140952600	140952600	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	140985020	140985020	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	141005588	141005588	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	141092246	141092246	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	141093563	141093563	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	141115957	141115957	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	141126784	141126784	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	141141977	141141977	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	14128104	14128104	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	143712589	143712589	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	143759005	143759005	+	IGR	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	143793183	143793183	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	143815791	143815791	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	143815929	143815929	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	143839651	143839651	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	143906552	143906552	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	144633539	144633539	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	144737506	144737506	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	145028148	145028148	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	145280864	145280864	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	145280875	145280875	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	149039649	149039649	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	152786736	152786736	+	IGR	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	152903349	152903349	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	152936665	152936665	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	152937414	152937414	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	153060948	153060948	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	153117488	153117488	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	153237189	153237189	+	IGR	SNP	C	T	T	rs114350616	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	154942812	154942812	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	155785092	155785092	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	155974520	155974520	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	16625637	16625637	+	IGR	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	17581824	17581824	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	20610398	20610398	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	21215507	21215507	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	22742322	22742322	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	22813303	22813304	+	IGR	INS	-	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	25246547	25246547	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	25474632	25474632	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	25721935	25721935	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	2933920	2933920	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	31514414	31514414	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	3157496	3157496	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	32511292	32511293	+	IGR	INS	-	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	3278791	3278791	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	34200807	34200807	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	35797171	35797171	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	36826566	36826566	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	36886343	36886343	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	38024017	38024017	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	39835585	39835585	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	41448976	41448976	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	41623538	41623538	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	41660853	41660853	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	42713647	42713647	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	46899875	46899875	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	48833375	48833375	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	48986680	48986680	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	49393835	49393835	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	49478107	49478107	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	49671657	49671657	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	50236987	50236987	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	50906925	50906925	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	50949053	50949053	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	51687949	51687949	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	51938649	51938649	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	52089153	52089153	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	52162992	52162992	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	52302080	52302080	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	52406105	52406105	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	52884044	52884044	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	53179076	53179076	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	53255675	53255675	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	53353548	53353548	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	53857141	53857141	+	IGR	SNP	G	T	T	rs149363466	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	54775816	54775816	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	55062370	55062370	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	55327900	55327900	+	IGR	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	56244158	56244158	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	56296595	56296595	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	56358659	56358659	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	56509915	56509915	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	56665779	56665779	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	57245000	57245000	+	IGR	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	57249129	57249129	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	57249221	57249221	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	57392539	57392539	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	57409005	57409005	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	57560267	57560267	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	57662212	57662212	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	57931403	57931403	+	IGR	SNP	A	G	G	rs137916864	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	61816995	61816995	+	IGR	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	62910157	62910157	+	IGR	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63354417	63354417	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	67236667	67236667	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	67575245	67575245	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	68136867	68136867	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	68674358	68674358	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	79669715	79669715	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	81086078	81086078	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	81569986	81569986	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	82377179	82377179	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	82812839	82812839	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	8392770	8392770	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	84439836	84439836	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	8456359	8456359	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	85381802	85381802	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	85500007	85500007	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	85538418	85538418	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	85685201	85685201	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	88151969	88151969	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	88998689	88998689	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	89335387	89335387	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	89508080	89508080	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	91014432	91014432	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	91176423	91176423	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	91377131	91377131	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	92689987	92689987	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	93980195	93980195	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	9502999	9502999	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	9504380	9504380	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	96088793	96088793	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	96108878	96108878	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	96162486	96162486	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	96204207	96204207	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	96391698	96391698	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	96441859	96441859	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	9655471	9655471	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	97222312	97222312	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	97292536	97292536	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	9766072	9766072	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	98127258	98127258	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	99562899	99562899	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	101389757	101389757	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	101915216	101915216	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	105348477	105348477	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	105348504	105348504	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	105894768	105894768	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	105924088	105924088	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	105933383	105933383	+	IGR	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	106208102	106208102	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	106278892	106278892	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	106304818	106304818	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	106859694	106859694	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	106875473	106875473	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	107273975	107273975	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	107934102	107934102	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	108185858	108185858	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	108594665	108594665	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	108685258	108685258	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	108911335	108911335	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	109150735	109150735	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	109585272	109585272	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	110359891	110359891	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	111514407	111514407	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	112273572	112273572	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	112943604	112943604	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	114527051	114527051	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	114670894	114670894	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	11491919	11491919	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	114948305	114948305	+	IGR	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	115423339	115423339	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	115744053	115744053	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	115932372	115932372	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	116396811	116396811	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	117158327	117158327	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	117199598	117199599	+	IGR	DNP	GG	CT	CT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	117283309	117283309	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	117439454	117439454	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	117450475	117450475	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	117452586	117452586	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	117638667	117638667	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	118221582	118221582	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	118707435	118707435	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	119779537	119779537	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	120546304	120546304	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	122036794	122036794	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	123145454	123145454	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	12554658	12554658	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	125925208	125925208	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	126746450	126746450	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	127067133	127067133	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	127122595	127122595	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	127425519	127425519	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	127426510	127426510	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	128260368	128260368	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	128501091	128501091	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	129454342	129454342	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	129617897	129617897	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	129952975	129952975	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	130040374	130040374	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	130125501	130125501	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	130465633	130465633	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	130546899	130546899	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	131626645	131626645	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	131685086	131685086	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	131745376	131745376	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	131765638	131765638	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	131782995	131782995	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	132269879	132269879	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	132472830	132472830	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	132472832	132472832	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	132520091	132520091	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	132546421	132546421	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	132660609	132660609	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	132770328	132770328	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	132896609	132896609	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	133124602	133124602	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	133537699	133537699	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	133691905	133691905	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	134162034	134162034	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	134182129	134182129	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	134186152	134186152	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	135064153	135064153	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	135216356	135216356	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	135267472	135267472	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	135307380	135307380	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	135330487	135330487	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	136198889	136198889	+	IGR	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	136233944	136233944	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	136371214	136371214	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	136837243	136837243	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	137020838	137020838	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	137041076	137041076	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	137155947	137155947	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	137216170	137216170	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	137875005	137875005	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	138281409	138281409	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	138293138	138293138	+	IGR	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	138294099	138294099	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	138399749	138399749	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	138430641	138430641	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	138979890	138979890	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	139530565	139530565	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	139536232	139536232	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	139569763	139569763	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	140005599	140005599	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	140200293	140200293	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	142881360	142881360	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	144214475	144214475	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	1695208	1695208	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	20336465	20336465	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	20968052	20968052	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	21407229	21407229	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	2170158	2170158	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	2228206	2228206	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	2263412	2263412	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	24799515	24799515	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	29311255	29311255	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	29886156	29886156	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	31233098	31233098	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	32935779	32935779	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	33659844	33659844	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	33717702	33717702	+	IGR	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	33977512	33977512	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	34143244	34143244	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	34565837	34565837	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	35727275	35727275	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	36297166	36297166	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	36818661	36818661	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	36955467	36955467	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	38545792	38545792	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	39295500	39295500	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	40798395	40798395	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	40861139	40861139	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	41326402	41326402	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	43308030	43308030	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	43396251	43396251	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	47012007	47012007	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	47012058	47012058	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	47019430	47019430	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	47338991	47338991	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	47353071	47353071	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	47491792	47491792	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	50595552	50595552	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	50787680	50787680	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	51705562	51705562	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	53696910	53696910	+	IGR	SNP	G	A	A	rs144734300	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	5463853	5463853	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	5481890	5481890	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	55846657	55846657	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	56999975	56999975	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	57523536	57523536	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	58824647	58824647	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	59082772	59082772	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	59115283	59115283	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	61923094	61923094	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	62152151	62152151	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	64805059	64805059	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	64808938	64808938	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	65250068	65250068	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	65448174	65448175	+	IGR	DNP	GG	TT	TT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	65467002	65467002	+	IGR	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	66848543	66848543	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	68675557	68675557	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	68716143	68716143	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	7001227	7001227	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	70042178	70042178	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	71926275	71926275	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	72708687	72708687	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	75498287	75498287	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	75720459	75720459	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	75797582	75797582	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	76510177	76510177	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	77484389	77484389	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	77861043	77861043	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	78701905	78701905	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	78944247	78944247	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	79416071	79416071	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	80138594	80138594	+	IGR	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	82263786	82263786	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	82322813	82322813	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	82827303	82827303	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	82863609	82863609	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	84515561	84515561	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	8498532	8498532	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	85972740	85972740	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	87186552	87186553	+	IGR	DNP	CC	AA	AA			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	87187065	87187065	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	87211887	87211887	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	88436103	88436103	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	88666610	88666610	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	88736266	88736266	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	88738879	88738879	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	88743710	88743710	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	89478243	89478243	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	89872766	89872766	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	89911858	89911858	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	90249143	90249143	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	91122237	91122237	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	91376229	91376229	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	91500657	91500657	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	9201943	9201943	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	92442070	92442070	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	92512237	92512237	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	92597433	92597433	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	92620341	92620341	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	92663067	92663067	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	92831625	92831625	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	93231888	93231888	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	93612351	93612351	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	94513400	94513400	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	94892396	94892396	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	96416001	96416001	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	96489433	96489433	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	97210243	97210243	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	97214012	97214012	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	98352415	98352415	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	98444015	98444015	+	IGR	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	98448056	98448056	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	99331530	99331530	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	100799813	100799813	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	101477646	101477646	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	101478225	101478225	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	101855661	101855661	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	102061015	102061015	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	103702260	103702260	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	104579347	104579347	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	105615079	105615079	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	105699757	105699757	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	10617608	10617608	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	106489643	106489643	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	107010630	107010630	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	107054333	107054333	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	108756913	108756913	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	10888101	10888101	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	10964132	10964132	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	110767611	110767611	+	IGR	SNP	C	A	A	rs112919723	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	11112463	11112463	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	111259313	111259313	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	111422945	111422945	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	116531158	116531158	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	116547922	116547922	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	118176153	118176153	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	118612189	118612189	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	118884330	118884330	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	120446201	120446201	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	120890984	120890984	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	120991952	120991952	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	12101675	12101676	+	IGR	DNP	GG	TT	TT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	121308104	121308104	+	IGR	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	121308108	121308108	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	121834509	121834509	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	122258220	122258220	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	122480640	122480640	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	122670720	122670720	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	122977049	122977049	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	123066184	123066184	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	12312290	12312290	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	12530480	12530480	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	1264996	1264996	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	126831250	126831250	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	12743824	12743824	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	128956858	128956858	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	13021872	13021872	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	132557918	132557918	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	13436909	13436909	+	IGR	DEL	A	-	-	rs112255863		TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	13600644	13600644	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	136360765	136360765	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	136944121	136944121	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	13775608	13775608	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	13813187	13813187	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	13893598	13893598	+	IGR	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	13930777	13930777	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	1499404	1499404	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	16233851	16233851	+	IGR	SNP	G	T	T	rs139047243	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	16400145	16400145	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	17860252	17860252	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	18120016	18120016	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	18911162	18911162	+	IGR	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	18912400	18912400	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	1972196	1972196	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	1973120	1973120	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	1974776	1974776	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	19872093	19872093	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	20011069	20011069	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	20291994	20291994	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	20292961	20292961	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	21179157	21179158	+	IGR	DNP	GG	CT	CT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	21191123	21191123	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	22141675	22141675	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	22178275	22178275	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	22495968	22495968	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	22931942	22931942	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	22935217	22935217	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	23361283	23361283	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	24055116	24055117	+	IGR	DNP	CC	AA	AA			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	24064698	24064698	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	24072737	24072737	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	24086240	24086240	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	24129851	24129851	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	24241895	24241895	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	24370191	24370191	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	24533238	24533238	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	24543699	24543699	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	25107713	25107713	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	25168332	25168332	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	25288255	25288255	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	25289339	25289339	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	25502098	25502098	+	IGR	SNP	G	T	T	rs148217480	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	25757016	25757016	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	25826839	25826839	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	25951000	25951001	+	IGR	DNP	GG	TT	TT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	26252277	26252277	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	26289009	26289009	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	26295098	26295098	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	26632725	26632725	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	27813960	27813960	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	2898937	2898937	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	2920845	2920845	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	29390607	29390607	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	29449291	29449291	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	29588576	29588576	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	29635888	29635888	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	29636849	29636849	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	29682830	29682830	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	29710278	29710278	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	29711905	29711905	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	30594536	30594536	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	30717872	30717872	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	30912099	30912099	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	31415919	31415919	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	31518683	31518683	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	31690238	31690238	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	31773500	31773500	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	32124040	32124040	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	32132542	32132542	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	32253093	32253093	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	32253694	32253694	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	32334586	32334586	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	32336723	32336723	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	32620275	32620275	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	32747997	32747997	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	32809074	32809074	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	32903506	32903506	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	37100506	37100506	+	IGR	SNP	C	G	G	rs146316754	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	3721277	3721277	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	38208732	38208732	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	42186460	42186460	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	43660213	43660213	+	IGR	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	45719619	45719619	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	47197109	47197109	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	5869550	5869550	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	6060463	6060463	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	6302615	6302615	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	66333738	66333738	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	66481591	66481591	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	66513386	66513386	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	68325392	68325392	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	68379524	68379524	+	IGR	SNP	T	C	C	rs146751099	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	68490716	68490716	+	IGR	SNP	T	C	C	rs75403980	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	68509324	68509324	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	69348042	69348042	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	69807205	69807205	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	69831122	69831122	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	71224730	71224730	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	71260028	71260028	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	72025093	72025093	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	7246306	7246306	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	7331722	7331723	+	IGR	DNP	CC	AA	AA			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	7362955	7362955	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	74720649	74720649	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	7619442	7619442	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	7619444	7619444	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	76235159	76235159	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	76264657	76264657	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	7629602	7629602	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	76348259	76348259	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	77814436	77814436	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	78157220	78157220	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	78818364	78818364	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	79164349	79164349	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	80819220	80819220	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	81407799	81407799	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	8146288	8146288	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	8173396	8173396	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	81795603	81795603	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	82559411	82559411	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	8264958	8264958	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	8285780	8285780	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	8293067	8293067	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	83879422	83879422	+	IGR	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	83902032	83902032	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	84135793	84135793	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	85498121	85498121	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	87830093	87830093	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	87911549	87911549	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	88125950	88125950	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	89385196	89385196	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	90356743	90356743	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	91566991	91566991	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	91876099	91876099	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	92699043	92699043	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	92922765	92922765	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	93506501	93506501	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	94935294	94935294	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	96743813	96743813	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	99830054	99830054	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	100047228	100047228	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	100964513	100964513	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	101382697	101382697	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	101450074	101450074	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	102204960	102204961	+	IGR	DNP	GG	TT	TT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	10281862	10281862	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	102858321	102858321	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	105256848	105256848	+	IGR	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	105661230	105661230	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	106516010	106516010	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	106660252	106660252	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	106803516	106803516	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	106952207	106952207	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	107031659	107031659	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	107203111	107203111	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	107254922	107254922	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	108216519	108216519	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	108263023	108263023	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	108389515	108389516	+	IGR	DNP	CC	AA	AA			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	108439357	108439357	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	108481784	108481784	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	109423731	109423731	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	110049747	110049747	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	110058826	110058826	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	110521746	110521746	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	111860031	111860031	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	111862934	111862934	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	111990441	111990441	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	112207897	112207897	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	112257050	112257050	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	112379503	112379503	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	112897463	112897463	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	112906998	112906998	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	112987650	112987650	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	113448210	113448210	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	114635262	114635262	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	115288449	115288449	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	115557475	115557475	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	115951724	115951724	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	115951749	115951749	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	115953147	115953147	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	116403192	116403192	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	116450234	116450234	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	116552257	116552257	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	116676533	116676533	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	116746362	116746362	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	116747345	116747345	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	116921632	116921632	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	117014842	117014842	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	117281528	117281528	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	117452429	117452429	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	118072617	118072617	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	118075271	118075271	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	118155214	118155214	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	118391378	118391378	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	11921194	11921194	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	119336451	119336451	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	119827912	119827912	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	119877418	119877418	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	119961041	119961041	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	120485984	120485984	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	120494207	120494207	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	120734649	120734649	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	1211345	1211345	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	121175113	121175113	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	121204384	121204384	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	121471220	121471220	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	121672695	121672695	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	121915180	121915180	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	122015297	122015297	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	124578621	124578621	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	124579795	124579795	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	124797223	124797223	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	124965507	124965507	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	125229954	125229954	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	125232721	125232721	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	126162447	126162447	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	126215406	126215406	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	126334605	126334605	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	126623760	126623760	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	126811825	126811825	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	127222348	127222348	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	128248718	128248718	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	128324819	128324819	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	128351017	128351017	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	128537448	128537448	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	128736075	128736075	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	128829046	128829046	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	129682163	129682163	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	130164261	130164261	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	130185504	130185504	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	130312464	130312464	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	131298013	131298013	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	131649589	131649589	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	132643602	132643602	+	IGR	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	13367174	13367174	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	134000877	134000877	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	134605404	134605404	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	134645509	134645509	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	134745043	134745043	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	134775483	134775483	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	134828065	134828065	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	135040139	135040139	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	135294857	135294857	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	135516058	135516058	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	135601784	135601784	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	135605947	135605947	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	135682087	135682087	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	13568421	13568421	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	136083877	136083877	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	136421956	136421957	+	IGR	DNP	GA	AG	AG			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	136739115	136739115	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	136896578	136896578	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	136980608	136980608	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	137404338	137404338	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	137455751	137455751	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	137565720	137565720	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	137648702	137648702	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	138341906	138341906	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	138341947	138341947	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	138922808	138922808	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	138929488	138929488	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	138984102	138984102	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	139004878	139004878	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	139114605	139114605	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	139428923	139428923	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	139459457	139459457	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	139568332	139568332	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	139988100	139988100	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	140232794	140232794	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	140747919	140747919	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	140752587	140752587	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	140768567	140768567	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	141257902	141257902	+	IGR	SNP	C	A	A	rs111325699	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	141315358	141315358	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	141386064	141386064	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	141435972	141435972	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	141563881	141563881	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	141585496	141585496	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	142122855	142122855	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	142136854	142136854	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	142182674	142182674	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	142237393	142237393	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	142274359	142274359	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	142438577	142438577	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	142446779	142446779	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	142593920	142593920	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	142643471	142643471	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	142760160	142760160	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	142760765	142760765	+	IGR	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	142779046	142779046	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	143191249	143191249	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	143595995	143595995	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	143618601	143618601	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	143623434	143623434	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	143877028	143877028	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	14404342	14404342	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	144252788	144252788	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	144337764	144337764	+	IGR	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	144426407	144426407	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	144475499	144475499	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	144643094	144643094	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	144712366	144712366	+	IGR	DEL	C	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	144755059	144755059	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	144757465	144757465	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	144922060	144922060	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	144964675	144964675	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	145058414	145058414	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	145059638	145059638	+	IGR	SNP	G	T	T	rs142307389	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	145067726	145067726	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	145103539	145103539	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	145187034	145187034	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	145203102	145203102	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	145295326	145295326	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	145296702	145296702	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	145373460	145373460	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	145452157	145452157	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	145757636	145757636	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	145761511	145761511	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	145768066	145768066	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	145998502	145998502	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	146019270	146019270	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	146027759	146027759	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	146038340	146038340	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	146064076	146064076	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	146178217	146178217	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	146181622	146181622	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	146215342	146215342	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	146311793	146311793	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	146547290	146547290	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	146746305	146746305	+	IGR	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	146775029	146775030	+	IGR	DNP	GG	TT	TT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	146910181	146910181	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	147125071	147125071	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	147162606	147162606	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	147201190	147201190	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	147250852	147250852	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	147280473	147280473	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	147293915	147293915	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	147392295	147392295	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	147432335	147432335	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	147508032	147508032	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	147518042	147518042	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	147520423	147520423	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	147554362	147554362	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	148084659	148084659	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	148185565	148185565	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	148441424	148441424	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	149400346	149400346	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	149494631	149494631	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	150371941	150371941	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	150415576	150415576	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	150421541	150421541	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	150425378	150425378	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	150433843	150433843	+	IGR	DEL	C	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	150449869	150449869	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	150877992	150877992	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	150914695	150914695	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	150927012	150927012	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	151060017	151060017	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	151648559	151648559	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	151726357	151726357	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	151844298	151844298	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	152559533	152559533	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	152568298	152568298	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	154661105	154661105	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	15949712	15949712	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	15974882	15974882	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	16245242	16245242	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	16245330	16245330	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	17371557	17371557	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	17917147	17917147	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	18174110	18174110	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	19258791	19258791	+	IGR	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	20341014	20341014	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	20365888	20365888	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	20700018	20700018	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	20701116	20701116	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	20791520	20791520	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	20796273	20796273	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	20987397	20987397	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	21059170	21059170	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	22308688	22308688	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	22385358	22385358	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	22606537	22606537	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	22698759	22698759	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	23479336	23479336	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	24266533	24266533	+	IGR	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	25355147	25355147	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	25470586	25470586	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	25481316	25481317	+	IGR	DNP	CA	AT	AT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	25482336	25482336	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	25651944	25651944	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	25845699	25845699	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	26128885	26128885	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	26178621	26178621	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	26256212	26256212	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	27535889	27535889	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	27860013	27860013	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	27878079	27878079	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	28098109	28098109	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	30021158	30021158	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	30207730	30207730	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	31116054	31116054	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	3162242	3162242	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	3365319	3365320	+	IGR	DNP	CC	AA	AA			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	3367397	3367397	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	34274681	34274681	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	34564716	34564716	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	34736712	34736712	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	35157087	35157087	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	35199566	35199566	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	35252637	35252637	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	35303009	35303009	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	35386467	35386467	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	35413111	35413111	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	37096337	37096337	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	37165216	37165216	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	37166516	37166516	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	37320183	37320183	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	37327494	37327494	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	37839915	37839915	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	38875139	38875139	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	39008277	39008277	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	3952744	3952744	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	39636630	39636630	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	39817718	39817718	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	40218658	40218658	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	40396891	40396891	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	40750477	40750477	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	4079346	4079346	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	4167739	4167739	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	42181672	42181672	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	42186749	42186749	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	42537762	42537762	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	43235956	43235956	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	43308428	43308428	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	43888656	43888656	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	44287363	44287363	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	44335790	44335790	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	44600431	44600431	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	45481766	45481766	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	45492498	45492498	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	4564122	4564122	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	45658995	45658995	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	45772987	45772987	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	45843660	45843660	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	46043402	46043402	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	46277908	46277908	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	4656674	4656674	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	47637665	47637665	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	4770736	4770736	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	48291768	48291768	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	48314048	48314048	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	4932785	4932785	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	49403188	49403188	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	50099762	50099762	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	50219215	50219215	+	IGR	SNP	G	T	T	rs140936811	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	5141242	5141242	+	IGR	DEL	A	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	51688279	51688279	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	52094851	52094851	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	5349865	5349865	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	53507873	53507873	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	53554240	53554240	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	5386841	5386841	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	5410150	5410150	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	5463869	5463869	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	5466818	5466818	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	54718962	54718962	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	54745937	54745937	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	54957935	54957935	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	55109882	55109882	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	55308843	55308843	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	5563397	5563397	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	55724509	55724509	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	5638386	5638386	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	5693461	5693461	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	5726414	5726414	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	57583914	57583914	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	57705983	57705983	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	57909440	57909440	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	58057286	58057286	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	61823573	61823573	+	IGR	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	63140933	63140933	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	63172280	63172280	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	63350969	63350969	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	63775438	63775438	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	63863028	63863028	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	644558	644558	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	64550050	64550051	+	IGR	DNP	CC	TT	TT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	64868585	64868585	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	64992630	64992630	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	65197221	65197221	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	65220286	65220286	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	65295095	65295095	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	65672179	65672179	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	65718606	65718606	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	65863420	65863420	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	65901364	65901364	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	65908025	65908025	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	66019114	66019114	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	66113068	66113068	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	66173217	66173217	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	6752987	6752987	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	67992102	67992102	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	67998238	67998238	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	68095510	68095510	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	68102520	68102520	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	68102939	68102939	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	68301132	68301132	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	68488790	68488790	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	68516127	68516127	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	68584045	68584045	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	69305222	69305222	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	69728283	69728283	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	728328	728328	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	73095285	73095285	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	730970	730970	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	73596038	73596038	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	74273081	74273081	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	7473210	7473210	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	75556017	75556017	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	76728763	76728763	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	7720807	7720807	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	77792310	77792310	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	77921519	77921519	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	78188699	78188699	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	78567940	78567940	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	78637192	78637192	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	79205696	79205696	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	79404167	79404167	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	79759719	79759719	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	79828220	79828220	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	79829571	79829571	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	79900090	79900090	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	80589446	80589446	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	80856445	80856445	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	81047652	81047652	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	81679550	81679550	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	82072431	82072431	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	82308841	82308841	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	82411252	82411252	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	82483998	82483998	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	82639603	82639603	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	82640238	82640238	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	82825425	82825425	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	83461842	83461842	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	83770763	83770763	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	83995878	83995878	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	84644167	84644167	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	84874340	84874340	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	84897123	84897123	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	85340908	85340908	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	85341320	85341320	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	86408020	86408020	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	86438184	86438184	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	86680292	86680292	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	87420365	87420365	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	88048908	88048908	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	88355896	88355896	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	88972561	88972561	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	89280121	89280121	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	89367949	89367949	+	IGR	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	89417135	89417135	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	89448293	89448293	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	89451205	89451205	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	89992223	89992223	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	90383736	90383736	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	90383745	90383745	+	IGR	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	92127533	92127533	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	92279416	92279416	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	9243995	9243995	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	92479185	92479185	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	92479212	92479212	+	IGR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	92549887	92549887	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	93006077	93006077	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	93406115	93406115	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	93573670	93573670	+	IGR	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	93574924	93574924	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	94661839	94661839	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	94754966	94754967	+	IGR	DEL	CA	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	95285251	95285251	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	95605587	95605587	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	96857723	96857723	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	97158092	97158092	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	97162812	97162812	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	97232464	97232464	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	97359099	97359099	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	97644821	97644821	+	IGR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	97748428	97748428	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	97834757	97834757	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	97977437	97977437	+	IGR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	99204549	99204549	+	IGR	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	99260322	99260322	+	IGR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	99411580	99411580	+	IGR	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	99530034	99530034	+	IGR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	Y	13443477	13443477	+	IGR	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VARS	7407	broad.mit.edu	37	6	31749557	31749557	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAT1L	57687	broad.mit.edu	37	16	77921644	77921644	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAV3	10451	broad.mit.edu	37	1	108366400	108366400	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VCAN	1462	broad.mit.edu	37	5	82794682	82794682	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VCAN	1462	broad.mit.edu	37	5	82818169	82818169	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VCAN	1462	broad.mit.edu	37	5	82833747	82833747	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VCAN	1462	broad.mit.edu	37	5	82834082	82834082	+	Missense_Mutation	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VIPAR	63894	broad.mit.edu	37	14	77908845	77908845	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VIT	5212	broad.mit.edu	37	2	37002618	37002618	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VN1R5	317705	broad.mit.edu	37	1	247419870	247419870	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VNN1	8876	broad.mit.edu	37	6	133020192	133020192	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13B	157680	broad.mit.edu	37	8	100148947	100148947	+	Missense_Mutation	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13B	157680	broad.mit.edu	37	8	100481100	100481100	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13B	157680	broad.mit.edu	37	8	100523447	100523447	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13B	157680	broad.mit.edu	37	8	100729328	100729328	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS33A	65082	broad.mit.edu	37	12	122747958	122747958	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS33B	26276	broad.mit.edu	37	15	91550237	91550237	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS52	6293	broad.mit.edu	37	6	33236340	33236340	+	Missense_Mutation	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VRK2	7444	broad.mit.edu	37	2	58276044	58276044	+	Silent	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VRK2	7444	broad.mit.edu	37	2	58311278	58311278	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VSIG10	54621	broad.mit.edu	37	12	118504445	118504445	+	Nonstop_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VSIG10	54621	broad.mit.edu	37	12	118504493	118504493	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VSIG1	340547	broad.mit.edu	37	X	107320447	107320447	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VSTM2L	128434	broad.mit.edu	37	20	36570855	36570855	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VWA3A	146177	broad.mit.edu	37	16	22134998	22134998	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VWA3A	146177	broad.mit.edu	37	16	22142889	22142889	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VWA3A	146177	broad.mit.edu	37	16	22155822	22155822	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VWA3B	200403	broad.mit.edu	37	2	98784141	98784141	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VWA3B	200403	broad.mit.edu	37	2	98797401	98797401	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VWF	7450	broad.mit.edu	37	12	6122794	6122794	+	Missense_Mutation	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VWF	7450	broad.mit.edu	37	12	6126259	6126259	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WARS	7453	broad.mit.edu	37	14	100820131	100820131	+	Silent	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WBSCR17	64409	broad.mit.edu	37	7	70875666	70875666	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WBSCR17	64409	broad.mit.edu	37	7	71134905	71134905	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WBSCR22	114049	broad.mit.edu	37	7	73100937	73100937	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WBSCR27	155368	broad.mit.edu	37	7	73249192	73249192	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR35	57539	broad.mit.edu	37	2	20180336	20180336	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR37	22884	broad.mit.edu	37	10	1147459	1147459	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR44	54521	broad.mit.edu	37	X	117570608	117570608	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR49	151790	broad.mit.edu	37	3	167259784	167259784	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR49	151790	broad.mit.edu	37	3	167322121	167322121	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR59	79726	broad.mit.edu	37	16	74946198	74946198	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR64	128025	broad.mit.edu	37	1	241876700	241876700	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR64	128025	broad.mit.edu	37	1	241901785	241901785	+	Missense_Mutation	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR64	128025	broad.mit.edu	37	1	241930531	241930532	+	Intron	DNP	GG	TT	TT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR64	128025	broad.mit.edu	37	1	241943427	241943427	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR64	128025	broad.mit.edu	37	1	241947933	241947933	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR65	149465	broad.mit.edu	37	1	43652305	43652305	+	Intron	DEL	G	-	-	rs1976284		TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR65	149465	broad.mit.edu	37	1	43652635	43652635	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR66	144406	broad.mit.edu	37	12	122396773	122396773	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR70	55100	broad.mit.edu	37	5	37657222	37657222	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR72	256764	broad.mit.edu	37	15	53901819	53901819	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR78	79819	broad.mit.edu	37	1	67340311	67340311	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR8	49856	broad.mit.edu	37	1	3551675	3551675	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR93	56964	broad.mit.edu	37	15	90286387	90286387	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WEE2	494551	broad.mit.edu	37	7	141416260	141416260	+	Intron	DEL	C	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WFDC12	128488	broad.mit.edu	37	20	43752415	43752415	+	3'UTR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WIPF1	7456	broad.mit.edu	37	2	175432714	175432714	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WIPF1	7456	broad.mit.edu	37	2	175445906	175445906	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WISP1	8840	broad.mit.edu	37	8	134217387	134217387	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNK1	65125	broad.mit.edu	37	12	1006053	1006053	+	Intron	SNP	C	T	T	rs72348777		TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNT10B	7480	broad.mit.edu	37	12	49361604	49361604	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WRAP53	55135	broad.mit.edu	37	17	7606002	7606002	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WRN	7486	broad.mit.edu	37	8	30974033	30974033	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WSCD1	23302	broad.mit.edu	37	17	6021636	6021636	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WWC1	23286	broad.mit.edu	37	5	167882159	167882159	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WWOX	51741	broad.mit.edu	37	16	78434610	78434610	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WWOX	51741	broad.mit.edu	37	16	79027503	79027503	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WWP1	11059	broad.mit.edu	37	8	87410497	87410497	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XCL1	6375	broad.mit.edu	37	1	168550201	168550201	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XDH	7498	broad.mit.edu	37	2	31589627	31589627	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XG	7499	broad.mit.edu	37	X	2726175	2726175	+	Intron	SNP	G	A	A	rs55840987		TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIRP1	165904	broad.mit.edu	37	3	39228314	39228314	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIRP1	165904	broad.mit.edu	37	3	39230226	39230226	+	Silent	SNP	C	G	G	rs141262169	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIRP1	165904	broad.mit.edu	37	3	39230525	39230525	+	Missense_Mutation	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIRP2	129446	broad.mit.edu	37	2	167892939	167892939	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIRP2	129446	broad.mit.edu	37	2	168096434	168096434	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XKR4	114786	broad.mit.edu	37	8	56079304	56079304	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XKR6	286046	broad.mit.edu	37	8	11005324	11005324	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XKR6	286046	broad.mit.edu	37	8	11007920	11007920	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPNPEP2	7512	broad.mit.edu	37	X	128889425	128889425	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPNPEP2	7512	broad.mit.edu	37	X	128894633	128894633	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPNPEP2	7512	broad.mit.edu	37	X	128901640	128901640	+	Missense_Mutation	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPO6	23214	broad.mit.edu	37	16	28118815	28118815	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPO6	23214	broad.mit.edu	37	16	28133055	28133055	+	Nonsense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPR1	9213	broad.mit.edu	37	1	180780738	180780738	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XRRA1	143570	broad.mit.edu	37	11	74629939	74629939	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XRRA1	143570	broad.mit.edu	37	11	74629944	74629944	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XYLB	9942	broad.mit.edu	37	3	38401944	38401944	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YPEL2	388403	broad.mit.edu	37	17	57477261	57477261	+	3'UTR	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YTHDC2	64848	broad.mit.edu	37	5	112889669	112889669	+	Missense_Mutation	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YY1AP1	55249	broad.mit.edu	37	1	155629350	155629350	+	3'UTR	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YY1AP1	55249	broad.mit.edu	37	1	155629968	155629968	+	Missense_Mutation	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZAK	51776	broad.mit.edu	37	2	173977841	173977841	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZAN	7455	broad.mit.edu	37	7	100336203	100336203	+	Missense_Mutation	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZAN	7455	broad.mit.edu	37	7	100361492	100361492	+	Silent	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBBX	79740	broad.mit.edu	37	3	167048600	167048600	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB20	26137	broad.mit.edu	37	3	114426660	114426660	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB20	26137	broad.mit.edu	37	3	114637326	114637326	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB32	27033	broad.mit.edu	37	19	36205630	36205630	+	Silent	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB34	403341	broad.mit.edu	37	9	129641787	129641787	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB41	360023	broad.mit.edu	37	1	197159122	197159122	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB7C	201501	broad.mit.edu	37	18	45744076	45744076	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB7C	201501	broad.mit.edu	37	18	45895363	45895363	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZCCHC16	340595	broad.mit.edu	37	X	111406675	111406675	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZCCHC16	340595	broad.mit.edu	37	X	111407958	111407958	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZCCHC16	340595	broad.mit.edu	37	X	111424279	111424279	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZCCHC16	340595	broad.mit.edu	37	X	111625531	111625531	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZCCHC5	203430	broad.mit.edu	37	X	77913599	77913599	+	Nonsense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZCWPW1	55063	broad.mit.edu	37	7	100003988	100003988	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZDHHC15	158866	broad.mit.edu	37	X	74670725	74670725	+	Nonsense_Mutation	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZDHHC15	158866	broad.mit.edu	37	X	74698892	74698892	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZDHHC21	340481	broad.mit.edu	37	9	14566744	14566744	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZEB1	6935	broad.mit.edu	37	10	31629519	31629519	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFAT	57623	broad.mit.edu	37	8	135568501	135568501	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFAT	57623	broad.mit.edu	37	8	135614378	135614378	+	Silent	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX4	79776	broad.mit.edu	37	8	77732741	77732741	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX4	79776	broad.mit.edu	37	8	77761891	77761891	+	Silent	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX4	79776	broad.mit.edu	37	8	77766690	77766690	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX4	79776	broad.mit.edu	37	8	77768370	77768370	+	Silent	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFP64	55734	broad.mit.edu	37	20	50701509	50701509	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFP64	55734	broad.mit.edu	37	20	50768638	50768638	+	3'UTR	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFPM2	23414	broad.mit.edu	37	8	106399278	106399278	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFPM2	23414	broad.mit.edu	37	8	106814271	106814271	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZIC3	7547	broad.mit.edu	37	X	136649480	136649480	+	Silent	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZIC4	84107	broad.mit.edu	37	3	147113743	147113743	+	Missense_Mutation	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMAT1	84460	broad.mit.edu	37	X	101167030	101167030	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMAT4	79698	broad.mit.edu	37	8	40696102	40696102	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMAT4	79698	broad.mit.edu	37	8	40721020	40721020	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMYM3	9203	broad.mit.edu	37	X	70466194	70466194	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMYM3	9203	broad.mit.edu	37	X	70467981	70467981	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMYM4	9202	broad.mit.edu	37	1	35817103	35817103	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMYM4	9202	broad.mit.edu	37	1	35862195	35862195	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMYM4	9202	broad.mit.edu	37	1	35870651	35870651	+	Nonsense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF135	7694	broad.mit.edu	37	19	58573180	58573180	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF14	7561	broad.mit.edu	37	19	19822426	19822426	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF187	7741	broad.mit.edu	37	6	28240098	28240098	+	Silent	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF226	7769	broad.mit.edu	37	19	44679334	44679334	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF236	7776	broad.mit.edu	37	18	74622668	74622668	+	Silent	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF236	7776	broad.mit.edu	37	18	74637129	74637129	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF248	57209	broad.mit.edu	37	10	38108689	38108689	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF280A	129025	broad.mit.edu	37	22	22868873	22868873	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF28	7576	broad.mit.edu	37	19	53302006	53302006	+	3'UTR	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF28	7576	broad.mit.edu	37	19	53302291	53302291	+	3'UTR	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF323	64288	broad.mit.edu	37	6	28294414	28294414	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF333	84449	broad.mit.edu	37	19	14806578	14806578	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF335	63925	broad.mit.edu	37	20	44579338	44579338	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF33A	7581	broad.mit.edu	37	10	38343873	38343873	+	Missense_Mutation	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF343	79175	broad.mit.edu	37	20	2464419	2464419	+	Silent	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF365	22891	broad.mit.edu	37	10	64298462	64298462	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF365	22891	broad.mit.edu	37	10	64311704	64311704	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF365	22891	broad.mit.edu	37	10	64415418	64415418	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF385D	79750	broad.mit.edu	37	3	21464191	21464191	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF385D	79750	broad.mit.edu	37	3	21853902	21853902	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF407	55628	broad.mit.edu	37	18	72516059	72516059	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF418	147686	broad.mit.edu	37	19	58441835	58441835	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF423	23090	broad.mit.edu	37	16	49559130	49559130	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF43	7594	broad.mit.edu	37	19	22000712	22000712	+	Silent	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF449	203523	broad.mit.edu	37	X	134484692	134484692	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF451	26036	broad.mit.edu	37	6	57015568	57015571	+	Frame_Shift_Del	DEL	ATAT	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF470	388566	broad.mit.edu	37	19	57089612	57089612	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF498	221785	broad.mit.edu	37	7	99226655	99226655	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF498	221785	broad.mit.edu	37	7	99226890	99226890	+	Silent	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF498	221785	broad.mit.edu	37	7	99230971	99230971	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF521	25925	broad.mit.edu	37	18	22804988	22804988	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF536	9745	broad.mit.edu	37	19	30935770	30935770	+	Missense_Mutation	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF547	284306	broad.mit.edu	37	19	57883090	57883090	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF548	147694	broad.mit.edu	37	19	57911286	57911286	+	3'UTR	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF566	84924	broad.mit.edu	37	19	36964265	36964265	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF578	147660	broad.mit.edu	37	19	53014749	53014749	+	Missense_Mutation	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF585A	199704	broad.mit.edu	37	19	37646123	37646123	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF595	152687	broad.mit.edu	37	4	64929	64929	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF606	80095	broad.mit.edu	37	19	58510765	58510765	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF658	26149	broad.mit.edu	37	9	40772467	40772467	+	Missense_Mutation	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF671	79891	broad.mit.edu	37	19	58233677	58233699	+	Splice_Site	DEL	CACTCACCAGGTCTAAGTCCCCT	-	-			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF673	55634	broad.mit.edu	37	X	46314696	46314696	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF673	55634	broad.mit.edu	37	X	46315484	46315484	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF676	163223	broad.mit.edu	37	19	22363351	22363351	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF679	168417	broad.mit.edu	37	7	63726980	63726980	+	Silent	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF681	148213	broad.mit.edu	37	19	23927544	23927544	+	Missense_Mutation	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF695	57116	broad.mit.edu	37	1	247163260	247163260	+	Silent	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF695	57116	broad.mit.edu	37	1	247163267	247163267	+	Missense_Mutation	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF700	90592	broad.mit.edu	37	19	12059662	12059662	+	Nonsense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF711	7552	broad.mit.edu	37	X	84525120	84525120	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF732	654254	broad.mit.edu	37	4	284311	284311	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF74	7625	broad.mit.edu	37	22	20759683	20759683	+	Silent	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF804B	219578	broad.mit.edu	37	7	88677189	88677189	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF804B	219578	broad.mit.edu	37	7	88963617	88963617	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF827	152485	broad.mit.edu	37	4	146831103	146831103	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF836	162962	broad.mit.edu	37	19	52671122	52671122	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF841	284371	broad.mit.edu	37	19	52570211	52570211	+	Silent	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF880	400713	broad.mit.edu	37	19	52887268	52887268	+	Silent	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZP4	57829	broad.mit.edu	37	1	238045741	238045741	+	Missense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZPBP	11055	broad.mit.edu	37	7	50121488	50121488	+	Silent	SNP	C	A	A	rs144577669		TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZPLD1	131368	broad.mit.edu	37	3	101833822	101833822	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZPLD1	131368	broad.mit.edu	37	3	101941652	101941652	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZPLD1	131368	broad.mit.edu	37	3	102104281	102104281	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZRANB2	9406	broad.mit.edu	37	1	71546703	71546704	+	5'UTR	DNP	CC	AA	AA			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSCAN4	201516	broad.mit.edu	37	19	58189944	58189944	+	Missense_Mutation	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSWIM6	57688	broad.mit.edu	37	5	60835527	60835527	+	Missense_Mutation	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZZEF1	23140	broad.mit.edu	37	17	3974200	3974200	+	Missense_Mutation	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	3389595	3389595	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	44126482	44126482	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	45402844	45402844	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	51816619	51816619	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	87358899	87358899	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	91681159	91681159	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	10397098	10397098	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	104776322	104776322	+	RNA	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	17651822	17651822	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	30908925	30908925	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	30910768	30910768	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	30921220	30921220	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	30953361	30953361	+	Missense_Mutation	SNP	C	A	A	rs150079177		TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	59997585	59997585	+	5'Flank	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	119988185	119988185	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	31280575	31280575	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	31282873	31282873	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	31290888	31290888	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	40963419	40963419	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	59034384	59034384	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	59097755	59097755	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	59106780	59106780	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	59161714	59161714	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	67935	67935	+	RNA	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	74565022	74565022	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	74591652	74591652	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	38111643	38111643	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	46804236	46804236	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	64321194	64321194	+	RNA	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	78633211	78633211	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	79031207	79031207	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	88179379	88179379	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	95410301	95410301	+	5'Flank	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	95410385	95410385	+	5'Flank	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	95413135	95413135	+	5'Flank	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22616569	22616569	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	27975705	27975705	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	38118039	38118039	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	38383200	38383200	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	38496469	38496469	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	80729605	80729605	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	80743550	80743550	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	80782923	80782923	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	88531666	88531666	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	98130672	98130672	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	98150226	98150226	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	101098901	101098901	+	RNA	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	20488869	20488869	+	RNA	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	22473324	22473324	+	RNA	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	31086681	31086681	+	5'Flank	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	35927929	35927929	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	21544379	21544379	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	24682526	24682526	+	5'Flank	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	34981427	34981427	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	80865774	80865774	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	80886879	80886879	+	Intron	SNP	A	T	T	rs139366881	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	69117049	69117049	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	70078241	70078241	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	118504	118504	+	RNA	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	37675628	37675628	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	39972235	39972235	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	40039677	40039677	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	40089034	40089034	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	5234850	5234850	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	22778682	22778682	+	5'Flank	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	36912708	36912708	+	RNA	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	42982935	42982936	+	Intron	DNP	GG	TT	TT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	101545653	101545653	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	119762190	119762190	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	142631898	142631898	+	Intron	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	142654251	142654251	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	142903576	142903576	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	143156683	143156683	+	Intron	SNP	T	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	148887713	148887714	+	Intron	DNP	CC	AG	AG			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	155585561	155585561	+	5'Flank	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	159410599	159410599	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	173257196	173257196	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	179556800	179556800	+	5'Flank	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	185559143	185559143	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	20723182	20723182	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	211381067	211381067	+	Nonsense_Mutation	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	85765264	85765264	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	99581404	99581404	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	1933844	1933844	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	57157505	57157505	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	58797695	58797695	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	58799096	58799096	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	59099084	59099084	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	61699924	61699924	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	19945844	19945844	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	23118622	23118622	+	5'Flank	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	28797027	28797027	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	28812890	28812890	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	139046208	139046208	+	Silent	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	145424606	145424606	+	5'Flank	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	145467380	145467380	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	145516941	145516941	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	145525702	145525702	+	RNA	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	145829303	145829303	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	166940787	166940787	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	182176159	182176159	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	186672891	186672891	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	195211624	195211624	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	2940872	2940872	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	40150368	40150368	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	40219800	40219800	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	56376892	56376892	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	64475412	64475412	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	66221703	66221703	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	6901393	6901393	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	78259521	78259521	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89179518	89179518	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89182208	89182208	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89278062	89278062	+	Splice_Site	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89489522	89489522	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89586756	89586756	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90028056	90028056	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90060902	90060902	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90162070	90162070	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90249441	90249441	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90420084	90420084	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	905890	905890	+	5'Flank	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	96646463	96646463	+	RNA	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	118260419	118260419	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	118260435	118260435	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	118282778	118282778	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	118336242	118336242	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	118338746	118338746	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	118398116	118398116	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	126386168	126386168	+	Missense_Mutation	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	159887394	159887394	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	162800614	162800614	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	165231871	165231871	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	165234491	165234491	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	172310373	172310373	+	RNA	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	180491507	180491507	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	181724681	181724681	+	RNA	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	185680550	185680550	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	22423421	22423421	+	5'Flank	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	644372	644372	+	Intron	SNP	C	G	G	rs113209223		TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	72200256	72200256	+	5'Flank	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	742501	742501	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	82206134	82206134	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	97557414	97557414	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	119547342	119547342	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	120118967	120118967	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	120315389	120315389	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	13740355	13740356	+	Intron	DNP	GG	TT	TT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	13753535	13753536	+	Intron	DNP	CC	TT	TT			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	13887237	13887237	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	13930541	13930541	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	14119642	14119642	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	14550465	14550465	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	14561839	14561839	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	14594741	14594741	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	14656780	14656780	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	14842987	14842987	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	153020622	153020622	+	5'Flank	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	159109896	159109896	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	170890448	170890448	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	182055811	182055811	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	189405670	189405670	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	58292141	58292141	+	RNA	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	69336979	69336979	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	85075853	85075853	+	Intron	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	85200587	85200587	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	88815033	88815033	+	Missense_Mutation	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	113881043	113881043	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	114067924	114067925	+	Intron	DNP	CC	AA	AA			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	122011943	122011943	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	151386021	151386021	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	152306883	152306883	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	152307138	152307138	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	164002652	164002652	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	20902202	20902202	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	24043595	24043595	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	24163288	24163288	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	32958088	32958088	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	34192376	34192376	+	5'Flank	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	3460098	3460098	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	42158600	42158600	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	42164993	42164993	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	43075217	43075217	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	86498909	86498909	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	91545695	91545695	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	10118747	10118747	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	10174889	10174889	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	126805940	126805940	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	138163698	138163698	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	140335421	140335421	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	143344005	143344005	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	2469522	2469522	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	68599130	68599130	+	5'Flank	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	74818543	74818543	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	92374311	92374311	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	97757919	97757919	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	97849942	97849942	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	98109069	98109069	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	9860803	9860803	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	106364170	106364170	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	123780187	123780187	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	123980935	123980935	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	141941152	141941152	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	141968459	141968459	+	RNA	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142032135	142032135	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142045766	142045766	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142104590	142104590	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142149389	142149389	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142152187	142152188	+	Intron	DNP	CC	AA	AA			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142157721	142157721	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142168707	142168707	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142207130	142207130	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142237165	142237165	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142423192	142423192	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142428827	142428827	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	156231168	156231168	+	RNA	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	29601176	29601176	+	Intron	SNP	T	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	30562932	30562932	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	81236676	81236676	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	81287137	81287137	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	104139114	104139114	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	12426270	12426270	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	128321486	128321486	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	128389340	128389340	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	128401881	128401881	+	Intron	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	64321839	64321839	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	72398347	72398347	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	73331978	73331978	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	73343631	73343631	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	93728256	93728256	+	RNA	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	93750588	93750588	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	108875194	108875194	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	109059929	109059929	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	109388679	109388679	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	109778912	109778912	+	Intron	SNP	A	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	109859778	109859778	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	15055022	15055022	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	15060218	15060218	+	Intron	SNP	A	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	22729946	22729946	+	Intron	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	23659216	23659216	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	26638385	26638385	+	5'Flank	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	66458242	66458242	+	5'Flank	SNP	T	C	C	rs141657327	by1000genomes	TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	66517349	66517349	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	M	11453	11453	+	RNA	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	M	14913	14913	+	Silent	SNP	C	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	M	3946	3946	+	RNA	SNP	G	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	11001676	11001676	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	114953276	114953276	+	RNA	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	131390566	131390566	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	135992311	135992311	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	27313331	27313331	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	47581913	47581913	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	47584795	47584795	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	48158638	48158638	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	53165186	53165186	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	64818233	64818233	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	64820179	64820179	+	Intron	SNP	A	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	76002730	76002730	+	Intron	SNP	G	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	76009442	76009442	+	Intron	SNP	C	A	A			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	76172801	76172801	+	Intron	SNP	C	G	G			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	76216781	76216781	+	Intron	SNP	G	T	T			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
psiTPTE22	387590	broad.mit.edu	37	22	17126506	17126506	+	Intron	SNP	T	C	C			TCGA-17-Z022-01A-01W-0746-08	TCGA-17-Z022-11A-01W-0746-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
