Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ABCA4	24	genome.wustl.edu	37	1	94543428	94543428	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	1	94543428	94543428	G	T	SNP	ABCA4	NM_000350.2	human	genbank	58_37c	-1	reviewed	missense	c.1372	p.P458T	1.000	NULL	HMMPfam_ABC_tran,HMMSmart_AAA,PatternScan_ABC_TRANSPORTER_1,superfamily_SSF52540	-	no_errors
ABCA6	23460	genome.wustl.edu	37	17	67094096	67094096	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	17	67094096	67094096	G	C	SNP	ABCA6	NM_080284.2	human	genbank	58_37c	-1	reviewed	missense	c.3085	p.P1029A	0.981	NULL	HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
ABCC12	94160	genome.wustl.edu	37	16	48167699	48167699	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	16	48167699	48167699	G	T	SNP	ABCC12	NM_033226.2	human	genbank	58_37c	-1	reviewed	missense	c.1027	p.Q343K	1.000	HMMPfam_ABC_membrane,superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain	HMMPfam_ABC_membrane,HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain,PatternScan_ABC_TRANSPORTER_1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
ABCD1	215	genome.wustl.edu	37	X	152991542	152991542	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	X	152991542	152991542	G	A	SNP	ABCD1	NM_000033.3	human	genbank	58_37c	+1	reviewed	missense	c.821	p.R274Q	0.553	HMMPfam_ABC_membrane_2	HMMPfam_ABC_tran,HMMSmart_AAA,HMMPfam_ABC_membrane_2,PatternScan_ABC_TRANSPORTER_1,superfamily_SSF52540	-	no_errors
ABHD11	83451	genome.wustl.edu	37	7	73151593	73151593	+	Silent	SNP	A	A	T	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	7	73151593	73151593	A	T	SNP	ABHD11	NM_148912.2	human	genbank	58_37c	-1	reviewed	silent	c.591	p.R197	0.000	HMMPfam_Abhydrolase_1,superfamily_alpha/beta-Hydrolases	HMMPfam_Abhydrolase_1,superfamily_alpha/beta-Hydrolases	-	no_errors
ACSM5	54988	genome.wustl.edu	37	16	20442397	20442397	+	Splice_Site	SNP	T	T	C	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	16	20442397	20442397	T	C	SNP	ACSM5	NM_017888.2	human	genbank	58_37c	+1	validated	splice_site	c.1206+2	e8+2	1.000	-	-	-	no_errors
ADAMTS19	171019	genome.wustl.edu	37	5	128863507	128863507	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	5	128863507	128863507	C	G	SNP	ADAMTS19	NM_133638.3	human	genbank	58_37c	+1	reviewed	missense	c.1135	p.L379V	1.000	"superfamily_Metalloproteases (""zincins"") catalytic domain"	"HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat,HMMPfam_Reprolysin,HMMPfam_Pep_M12B_propep,PatternScan_ZINC_PROTEASE,HMMSmart_SM00608,PatternScan_ZINC_FINGER_C2H2_1,HMMPfam_ADAM_spacer1,HMMPfam_PLAC,superfamily_Metalloproteases (""zincins"") catalytic domain"	-	no_errors
ADAMTS2	9509	genome.wustl.edu	37	5	178585812	178585812	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	5	178585812	178585812	G	A	SNP	ADAMTS2	NM_014244.2	human	genbank	58_37c	-1	reviewed	silent	c.1044	p.L348	1.000	"HMMPfam_Reprolysin,superfamily_Metalloproteases (""zincins"") catalytic domain"	"HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat,HMMPfam_Reprolysin,HMMPfam_Pep_M12B_propep,HMMPfam_ADAM_spacer1,superfamily_Metalloproteases (""zincins"") catalytic domain"	-	no_errors
ADAMTS6	11174	genome.wustl.edu	37	5	64748724	64748724	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	5	64748724	64748724	G	T	SNP	ADAMTS6	NM_197941.2	human	genbank	58_37c	-1	reviewed	missense	c.653	p.P218H	1.000	NULL	"HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat,HMMPfam_Reprolysin,HMMPfam_Pep_M12B_propep,HMMPfam_ADAM_spacer1,HMMPfam_PLAC,superfamily_Metalloproteases (""zincins"") catalytic domain"	-	no_errors
ADSL	158	genome.wustl.edu	37	22	40746017	40746017	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	22	40746017	40746017	C	A	SNP	ADSL	NM_000026.2	human	genbank	58_37c	+1	reviewed	missense	c.335	p.S112Y	1.000	HMMPfam_Lyase_1,superfamily_L-aspartase-like	HMMPfam_Lyase_1,superfamily_L-aspartase-like,HMMPfam_ADSL_C,PatternScan_FUMARATE_LYASES	-	no_errors
AGL	178	genome.wustl.edu	37	1	100330007	100330007	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	1	100330007	100330007	G	C	SNP	AGL	NM_000028.2	human	genbank	58_37c	+1	reviewed	missense	c.526	p.A176P	1.000	superfamily_(Trans)glycosidases	superfamily_Six-hairpin glycosidases,HMMPfam_GDE_C,superfamily_(Trans)glycosidases	-	no_errors
AHCTF1	25909	genome.wustl.edu	37	1	247067282	247067282	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	1	247067282	247067282	T	A	SNP	AHCTF1	NM_015446.4	human	genbank	58_37c	-1	validated	missense	c.935	p.K312M	1.000	NULL	PatternScan_TUBULIN_B_AUTOREG,HMMPfam_AT_hook,HMMSmart_AT_hook	-	no_errors
AKAP6	9472	genome.wustl.edu	37	14	33293160	33293160	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	14	33293160	33293160	T	A	SNP	AKAP6	NM_004274.4	human	genbank	58_37c	+1	reviewed	missense	c.6141	p.H2047Q	1.000	NULL	PatternScan_PFKB_KINASES_2,HMMSmart_SM00150,superfamily_Spectrin repeat	-	no_errors
ALK	238	genome.wustl.edu	37	2	29432670	29432675	+	In_Frame_Del	DEL	ATCCCG	ATCCCG	-	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	ATCCCG	ATCCCG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	2	29432670	29432675	ATCCCG	-	DEL	ALK	NM_004304.3	human	genbank	58_37c	-1	reviewed	in_frame_del	c.3818_3813	p.FGM1271in_frame_delL	1.000:1.000:0.873:1.000:1.000:0.947	HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like)	HMMPfam_MAM,HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,PatternScan_RECEPTOR_TYR_KIN_II,HMMSmart_SM00192,superfamily_LDL receptor-like module,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_TYR,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP	-	no_errors
ANKRD30B	374860	genome.wustl.edu	37	18	14782552	14782552	+	Silent	SNP	T	T	C	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	18	14782552	14782552	T	C	SNP	ANKRD30B	NM_001145029.1	human	genbank	58_37c	+1	validated	silent	c.1509	p.T503	0.000	NULL	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat	-	no_errors
ANKRD50	57182	genome.wustl.edu	37	4	125631416	125631416	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	4	125631416	125631416	G	C	SNP	ANKRD50	NM_020337.2	human	genbank	58_37c	-1	validated	missense	c.251	p.T84R	1.000	NULL	HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK	-	no_errors
ARHGAP24	83478	genome.wustl.edu	37	4	86863218	86863218	+	Splice_Site	SNP	G	G	T	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	4	86863218	86863218	G	T	SNP	ARHGAP24	NM_001025616.2	human	genbank	58_37c	+1	validated	splice_site	c.392-1	e4-1	1.000	-	-	-	no_errors
ARMC8	25852	genome.wustl.edu	37	3	137983034	137983034	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	3	137983034	137983034	G	C	SNP	ARMC8	NM_015396.3	human	genbank	58_37c	+1	validated	missense	c.1237	p.V413L	0.999	superfamily_ARM-type_fold	HMMPfam_Arm,HMMSmart_ARM,superfamily_ARM-type_fold	-	no_errors
ARMCX1	51309	genome.wustl.edu	37	X	100807921	100807921	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	X	100807921	100807921	G	A	SNP	ARMCX1	NM_016608.1	human	genbank	58_37c	+1	reviewed	missense	c.8	p.R3H	0.998	NULL	HMMPfam_DUF634,superfamily_ARM-type_fold	-	no_errors
ASPH	444	genome.wustl.edu	37	8	62563641	62563641	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	8	62563641	62563641	G	C	SNP	ASPH	NM_004318.3	human	genbank	58_37c	-1	reviewed	missense	c.458	p.S153C	0.329	HMMPfam_Asp-B-Hydro_N,superfamily_SSF48452	HMMPfam_Asp_Arg_Hydrox,HMMPfam_Asp-B-Hydro_N,superfamily_SSF48452,superfamily_SSF51197	-	no_errors
ATP8B2	57198	genome.wustl.edu	37	1	154300293	154300293	+	Silent	SNP	T	T	G	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	T	T	T	G	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	1	154300293	154300293	T	G	SNP	ATP8B2	NM_020452.3	human	genbank	58_37c	+1	reviewed	silent	c.18	p.A6	0.000	NULL	HMMPfam_E1-E2_ATPase,HMMPfam_Hydrolase_3,PatternScan_ATPASE_E1_E2,superfamily_SSF56784,superfamily_SSF81653,superfamily_SSF81660,superfamily_SSF81665	-	no_errors
BAI1	575	genome.wustl.edu	37	8	143562899	143562901	+	In_Frame_Del	DEL	GCT	GCT	-	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	GCT	GCT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	8	143562899	143562901	GCT	-	DEL	BAI1	NM_001702.2	human	genbank	58_37c	+1	reviewed	in_frame_del	c.1957_1959	p.A653in_frame_del	1.000:1.000:0.440	NULL	HMMPfam_GPS,HMMSmart_SM00303,HMMPfam_7tm_2,HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat,HMMPfam_HRM,HMMSmart_SM00008	-	no_errors
BAI1	575	genome.wustl.edu	37	8	143562904	143562904	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	G	G	G	-	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	8	143562904	143562904	G	-	DEL	BAI1	NM_001702.2	human	genbank	58_37c	+1	reviewed	frame_shift_del	c.1962	p.Q654fs	1.000	NULL	HMMPfam_GPS,HMMSmart_SM00303,HMMPfam_7tm_2,HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat,HMMPfam_HRM,HMMSmart_SM00008	-	no_errors
BPIL3	128859	genome.wustl.edu	37	20	31627293	31627293	+	Silent	SNP	C	C	T	rs139555218	byFrequency	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	20	31627293	31627293	C	T	SNP	BPIL3	NM_174897.2	human	genbank	58_37c	+1	validated	silent	c.1041	p.S347	0.014	HMMPfam_LBP_BPI_CETP_C,HMMSmart_BPI2,superfamily_Bactericidal_perm-incr_a/b_dom	HMMPfam_LBP_BPI_CETP_C,HMMSmart_BPI2,HMMPfam_LBP_BPI_CETP,HMMSmart_BPI1,superfamily_Bactericidal_perm-incr_a/b_dom,PatternScan_LBP_BPI_CETP	-	no_errors
BRCA2	675	genome.wustl.edu	37	13	32953476	32953476	+	Nonsense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	T	T	T	G	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	13	32953476	32953476	T	G	SNP	BRCA2	NM_000059.3	human	genbank	58_37c	+1	reviewed	nonsense	c.8777	p.L2926*	0.941	superfamily_Nucleic_acid_OB,superfamily_SSF81878	HMMPfam_BRCA2,HMMPfam_BRCA-2_OB1,HMMPfam_BRCA-2_OB3,HMMPfam_Tower,HMMPfam_BRCA-2_helical,superfamily_BRCA2_helical,superfamily_Nucleic_acid_OB,superfamily_SSF81878	-	no_errors
C10orf110	55853	genome.wustl.edu	37	10	1089851	1089869	+	RNA	DEL	TGCACTTCCTTGAACAGAG	TGCACTTCCTTGAACAGAG	-	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	TGCACTTCCTTGAACAGAG	TGCACTTCCTTGAACAGAG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	10	1089851	1089869	TGCACTTCCTTGAACAGAG	-	DEL	C10orf110	NR_024628.1	human	genbank	58_37c	+1	validated	rna	NULL	NULL	0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.010:0.009:0.000:0.000:0.000	-	-	-	no_errors
C1QTNF2	114898	genome.wustl.edu	37	5	159781785	159781785	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	5	159781785	159781785	G	T	SNP	C1QTNF2	NM_031908.4	human	genbank	58_37c	-1	validated	missense	c.369	p.S123R	0.082	HMMPfam_Collagen	HMMPfam_C1q,HMMSmart_SM00110,HMMPfam_Collagen,superfamily_TNF-like	-	no_errors
C1orf175	374977	genome.wustl.edu	37	1	55175761	55175761	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	1	55175761	55175761	C	A	SNP	C1orf175	NM_001039464.2	human	genbank	58_37c	+1	validated	missense	c.3873	p.H1291Q	0.998	NULL	superfamily_ARM repeat	-	no_errors
C1orf65	164127	genome.wustl.edu	37	1	223567939	223567939	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	1	223567939	223567939	C	G	SNP	C1orf65	NM_152610.2	human	genbank	58_37c	+1	validated	missense	c.1122	p.C374W	0.424	NULL	NULL	-	no_errors
C5orf36	285600	genome.wustl.edu	37	5	93752964	93752964	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	5	93752964	93752964	G	C	SNP	C5orf36	NM_001145678.1	human	genbank	58_37c	-1	validated	missense	c.2604	p.N868K	1.000	NULL	NULL	-	no_errors
CASR	846	genome.wustl.edu	37	3	121980913	121980913	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	3	121980913	121980913	A	T	SNP	CASR	NM_000388.3	human	genbank	58_37c	+1	reviewed	missense	c.1031	p.H344L	1.000	HMMPfam_ANF_receptor,superfamily_Periplasmic binding protein-like I	HMMPfam_ANF_receptor,HMMPfam_NCD3G,HMMPfam_7tm_3,PatternScan_G_PROTEIN_RECEP_F3_1,PatternScan_G_PROTEIN_RECEP_F3_2,PatternScan_G_PROTEIN_RECEP_F3_3,superfamily_Periplasmic binding protein-like I	-	no_errors
CDR1	1038	genome.wustl.edu	37	X	139866173	139866173	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	T	T	T	G	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	X	139866173	139866173	T	G	SNP	CDR1	NM_004065.2	human	genbank	58_37c	-1	reviewed	missense	c.359	p.D120A	0.017	NULL	NULL	-	no_errors
CELSR2	1952	genome.wustl.edu	37	1	109815559	109815559	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	1	109815559	109815559	G	A	SNP	CELSR2	NM_001408.2	human	genbank	58_37c	+1	reviewed	missense	c.8248	p.E2750K	0.993	NULL	PatternScan_ASX_HYDROXYL,HMMPfam_GPS,HMMSmart_GPS,HMMPfam_7tm_2,HMMSmart_TNFR,HMMSmart_LamG,HMMPfam_HRM,HMMSmart_HormR,HMMSmart_EGF_CA,HMMPfam_Laminin_EGF,HMMSmart_EGF_Lam,PatternScan_EGF_LAM_1,HMMPfam_Cadherin,HMMSmart_CA,PatternScan_CADHERIN_1,HMMPfam_EGF,HMMSmart_EGF,superfamily_ConA_like_lec_gl,HMMPfam_Laminin_G_2,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_Cadherin,PatternScan_G_PROTEIN_RECEP_F2_1,PatternScan_G_PROTEIN_RECEP_F2_2,superfamily_SSF57196	-	no_errors
CEP70	80321	genome.wustl.edu	37	3	138216888	138216888	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	3	138216888	138216888	G	C	SNP	CEP70	NM_024491.2	human	genbank	58_37c	-1	validated	missense	c.1717	p.L573V	1.000	NULL	NULL	-	no_errors
CLIP1	6249	genome.wustl.edu	37	12	122812589	122812589	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	12	122812589	122812589	G	A	SNP	CLIP1	NM_002956.2	human	genbank	58_37c	-1	validated	silent	c.3121	p.L1041	0.000	NULL	HMMPfam_CAP_GLY,PatternScan_CAP_GLY_1,superfamily_Cap-Gly domain	-	no_errors
CLSTN2	64084	genome.wustl.edu	37	3	140123537	140123537	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	3	140123537	140123537	C	A	SNP	CLSTN2	NM_022131.2	human	genbank	58_37c	+1	validated	missense	c.566	p.S189Y	1.000	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Concanavalin A-like lectins/glucanases,superfamily_Cadherin-like	-	no_errors
COL12A1	1303	genome.wustl.edu	37	6	75899454	75899454	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	6	75899454	75899454	A	T	SNP	COL12A1	NM_004370.5	human	genbank	58_37c	-1	reviewed	missense	c.472	p.Y158N	1.000	HMMPfam_VWA,HMMSmart_SM00327,superfamily_vWA-like	HMMPfam_VWA,HMMSmart_SM00327,HMMSmart_SM00210,HMMPfam_fn3,HMMSmart_SM00060,HMMPfam_Collagen,superfamily_Fibronectin type III,superfamily_Concanavalin A-like lectins/glucanases,superfamily_vWA-like	-	no_errors
COL4A4	1286	genome.wustl.edu	37	2	227886853	227886853	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	2	227886853	227886853	G	C	SNP	COL4A4	NM_000092.4	human	genbank	58_37c	-1	reviewed	missense	c.4127	p.P1376R	1.000	NULL	HMMPfam_C4,HMMSmart_SM00111,HMMPfam_Collagen,superfamily_C-type lectin-like	-	no_errors
COL6A6	131873	genome.wustl.edu	37	3	130284028	130284028	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	3	130284028	130284028	C	A	SNP	COL6A6	NM_001102608.1	human	genbank	58_37c	+1	provisional	missense	c.852	p.S284R	0.971	HMMPfam_VWA,HMMSmart_SM00327,superfamily_vWA-like	HMMPfam_VWA,HMMSmart_SM00327,HMMPfam_Collagen,superfamily_vWA-like	-	no_errors
CPSF2	53981	genome.wustl.edu	37	14	92628064	92628064	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	14	92628064	92628064	A	G	SNP	CPSF2	NM_017437.1	human	genbank	58_37c	+1	validated	silent	c.2325	p.L775	1.000	NULL	HMMPfam_Lactamase_B,HMMPfam_RMMBL,superfamily_Metallo-hydrolase/oxidoreductase	-	no_errors
CSMD2	114784	genome.wustl.edu	37	1	34191097	34191097	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	1	34191097	34191097	C	T	SNP	CSMD2	NM_052896.3	human	genbank	58_37c	-1	validated	missense	c.2428	p.D810N	1.000	HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain	HMMPfam_Sushi,HMMSmart_SM00032,HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain,PatternScan_GLYCOSYL_HYDROL_F10,PatternScan_IG_MHC,superfamily_Complement control module/SCR domain	-	no_errors
CSPP1	79848	genome.wustl.edu	37	8	68089921	68089921	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	8	68089921	68089921	T	C	SNP	CSPP1	NM_001077204.1	human	genbank	58_37c	+1	validated	missense	c.3206	p.L1069S	0.757	NULL	NULL	-	no_errors
CXorf22	170063	genome.wustl.edu	37	X	35985882	35985882	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	X	35985882	35985882	A	G	SNP	CXorf22	NM_152632.3	human	genbank	58_37c	+1	validated	missense	c.1747	p.M583V	0.001	NULL	NULL	-	no_errors
CYP4F11	57834	genome.wustl.edu	37	19	16034822	16034822	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	19	16034822	16034822	G	C	SNP	CYP4F11	NM_001128932.1	human	genbank	58_37c	-1	reviewed	missense	c.718	p.L240V	0.001	HMMPfam_p450,superfamily_Cytochrome P450	HMMPfam_p450,superfamily_Cytochrome P450,PatternScan_CYTOCHROME_P450	-	no_errors
CYP4F2	8529	genome.wustl.edu	37	19	15990642	15990642	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	19	15990642	15990642	G	C	SNP	CYP4F2	NM_001082.3	human	genbank	58_37c	-1	reviewed	missense	c.1181	p.P394R	0.992	HMMPfam_p450,superfamily_Cytochrome_P450	HMMPfam_p450,superfamily_Cytochrome_P450,PatternScan_CYTOCHROME_P450	-	no_errors
DALRD3	55152	genome.wustl.edu	37	3	49053734	49053734	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	3	49053734	49053734	C	A	SNP	DALRD3	NM_001009996.1	human	genbank	58_37c	-1	validated	missense	c.1186	p.G396C	1.000	NULL	HMMPfam_DALR_1,superfamily_Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	-	no_errors
DEAF1	10522	genome.wustl.edu	37	11	654016	654016	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	11	654016	654016	G	A	SNP	DEAF1	NM_021008.2	human	genbank	58_37c	-1	validated	silent	c.1539	p.S513	0.974	HMMPfam_zf-MYND,PatternScan_ZF_MYND_1	HMMPfam_SAND,HMMSmart_SM00258,HMMPfam_zf-MYND,PatternScan_ZF_MYND_1,superfamily_SAND domain-like	-	no_errors
DNAH11	8701	genome.wustl.edu	37	7	21659621	21659621	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	7	21659621	21659621	C	T	SNP	DNAH11	NM_003777.3	human	genbank	58_37c	+1	reviewed	silent	c.4440	p.Y1480	0.983	HMMPfam_DHC_N2	PatternScan_THIOL_PROTEASE_HIS,HMMSmart_SM00382,HMMPfam_Dynein_heavy,HMMPfam_AAA_5,HMMPfam_DHC_N1,HMMPfam_DHC_N2,PatternScan_WD_REPEATS_1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
DNAH5	1767	genome.wustl.edu	37	5	13841155	13841155	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	5	13841155	13841155	G	A	SNP	DNAH5	NM_001369.2	human	genbank	58_37c	-1	reviewed	nonsense	c.5569	p.Q1857*	1.000	NULL	HMMSmart_AAA,HMMPfam_Dynein_heavy,HMMPfam_AAA_5,HMMPfam_DHC_N1,HMMPfam_DHC_N2,superfamily_Spectrin,superfamily_SSF52540	-	no_errors
DNALI1	7802	genome.wustl.edu	37	1	38030643	38030643	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	1	38030643	38030643	T	C	SNP	DNALI1	NM_003462.3	human	genbank	58_37c	+1	reviewed	missense	c.824	p.I275T	1.000	HMMPfam_Ax_dynein_light	HMMPfam_Ax_dynein_light	-	no_errors
DOCK2	1794	genome.wustl.edu	37	5	169507239	169507239	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	5	169507239	169507239	G	T	SNP	DOCK2	NM_004946.2	human	genbank	58_37c	+1	validated	missense	c.5239	p.V1747F	0.027	NULL	HMMSmart_SM00326,superfamily_SH3-domain,superfamily_Cytochrome c,HMMPfam_SH3_2	-	no_errors
DSCAML1	57453	genome.wustl.edu	37	11	117302417	117302434	+	In_Frame_Del	DEL	GACTTCACATTCTTCCTG	GACTTCACATTCTTCCTG	-	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	GACTTCACATTCTTCCTG	GACTTCACATTCTTCCTG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	11	117302417	117302434	GACTTCACATTCTTCCTG	-	DEL	DSCAML1	NM_020693.2	human	genbank	58_37c	-1	provisional	in_frame_del	c.5387_5370	p.RKNVKS1791in_frame_del	1.000:1.000:1.000:1.000:1.000:0.985:1.000:0.994:0.435:0.992:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000	NULL	HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,HMMPfam_I-set,HMMPfam_ig,superfamily_Immunoglobulin	-	no_errors
EEF1D	1936	genome.wustl.edu	37	8	144669010	144669010	+	Silent	SNP	A	A	T	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	8	144669010	144669010	A	T	SNP	EEF1D	NM_001130053.1	human	genbank	58_37c	-1	reviewed	silent	c.1104	p.A368	0.740	NULL	PatternScan_EF1BD_1,PatternScan_EF1BD_2,HMMPfam_EF1_GNE,superfamily_eEF-1beta-like,HMMPfam_EF-1_beta_acid	-	no_errors
ENSG00000188014	0	genome.wustl.edu	37	4	113483568	113483589	+	Frame_Shift_Del	DEL	AAAGTAGTCCTGAATGTTTTTC	AAAGTAGTCCTGAATGTTTTTC	-	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	AAAGTAGTCCTGAATGTTTTTC	AAAGTAGTCCTGAATGTTTTTC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	4	113483568	113483589	AAAGTAGTCCTGAATGTTTTTC	-	DEL	C4orf21	ENST00000505019	human	ensembl	58_37c	-1	known	frame_shift_del	c.4656_4635	p.K1546fs	0.918:0.997:1.000:1.000:0.999:0.990:0.994:0.998:0.995:0.963:0.988:0.986:0.955:1.000:1.000:0.998:1.000:1.000:0.989:0.994:0.999:0.998	NULL	HMMPfam_zf-GRF,HMMPfam_DUF2439,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
ENSG00000245063	0	genome.wustl.edu	37	1	55534692	55534692	+	RNA	SNP	A	A	C	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	A	A	A	C	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	1	55534692	55534692	A	C	SNP	USP24	NM_015306.2	human	genbank	58_37c	-1	validated	3_prime_untranslated_region	c.*26	NULL	0.000	-	-	-	no_errors
ENSG00000245951	0	genome.wustl.edu	37	2	128473677	128473677	+	RNA	SNP	C	T	T	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	2	128473677	128473677	C	T	SNP	WDR33	NM_018383.3	human	genbank	58_37c	-1	reviewed	intronic	c.2869+1052	e16+1052	0.005	-	-	-	no_errors
ENSG00000246022	0	genome.wustl.edu	37	3	125926184	125926187	+	RNA	DEL	CTGA	CTGA	-	rs3047862	byCluster	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	CTGA	CTGA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	3	125926184	125926187	CTGA	-	DEL	ENSG00000246022	ENST00000500525	human	ensembl	58_37c	+1	known	3_prime_untranslated_region	c.*125926184	NULL	0.000:0.000:0.000:0.000	-	-	-	no_coding_region
ENSG00000247383	0	genome.wustl.edu	37	5	107006330	107006330	+	RNA	SNP	G	G	T	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	5	107006330	107006330	G	T	SNP	EFNA5	NM_001962.2	human	genbank	58_37c	-1	reviewed	5_prime_untranslated_region	c.-16	NULL	1.000	-	-	-	no_errors
EPN2	22905	genome.wustl.edu	37	17	19235190	19235211	+	Frame_Shift_Del	DEL	CCCAAAACAATGGAACTACCAG	CCCAAAACAATGGAACTACCAG	-	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	CCCAAAACAATGGAACTACCAG	CCCAAAACAATGGAACTACCAG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	17	19235190	19235211	CCCAAAACAATGGAACTACCAG	-	DEL	EPN2	NM_014964.4	human	genbank	58_37c	+1	reviewed	frame_shift_del	c.1436_1457	p.Q480fs	1.000:1.000:1.000:0.951:0.625:0.713:0.835:0.990:0.995:0.974:0.954:0.967:0.976:0.947:0.969:0.969:0.080:0.095:0.181:0.002:0.966:1.000	NULL	HMMPfam_ENTH,HMMPfam_UIM,HMMSmart_SM00726,superfamily_ENTH/VHS domain,HMMSmart_SM00273	-	no_errors
EPN3	55040	genome.wustl.edu	37	17	48614030	48614030	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	17	48614030	48614030	C	T	SNP	EPN3	NM_017957.2	human	genbank	58_37c	+1	validated	missense	c.113	p.S38L	1.000	HMMPfam_ENTH,superfamily_ENTH/VHS domain,HMMSmart_SM00273	HMMPfam_ENTH,HMMPfam_UIM,HMMSmart_SM00726,superfamily_ENTH/VHS domain,HMMSmart_SM00273	-	no_errors
ETV6	2120	genome.wustl.edu	37	12	12037502	12037502	+	Missense_Mutation	SNP	G	G	C	rs146280653	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	12	12037502	12037502	G	C	SNP	ETV6	NM_001987.4	human	genbank	58_37c	+1	reviewed	missense	c.1133	p.R378P	1.000	"HMMPfam_Ets,HMMSmart_SM00413,superfamily_""Winged helix"" DNA-binding domain"	"HMMPfam_Ets,HMMSmart_SM00413,PatternScan_ETS_DOMAIN_2,HMMPfam_SAM_PNT,HMMSmart_SM00251,superfamily_SAM/Pointed domain,superfamily_""Winged helix"" DNA-binding domain"	-	no_errors
FCGR1B	2210	genome.wustl.edu	37	1	120927202	120927202	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	1	120927202	120927202	G	A	SNP	FCGR1B	NM_001017986.2	human	genbank	58_37c	-1	validated	nonsense	c.778	p.Q260*	0.003	NULL	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_ig,superfamily_Immunoglobulin	-	no_errors
GP5	2814	genome.wustl.edu	37	3	194118427	194118427	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	3	194118427	194118427	C	T	SNP	GP5	NM_004488.2	human	genbank	58_37c	-1	validated	silent	c.585	p.K195	0.082	superfamily_SSF52058	HMMSmart_LRRNT,HMMPfam_LRRCT,HMMSmart_LRRCT,HMMPfam_LRR_1,HMMSmart_LRR_TYP,superfamily_SSF52058	-	no_errors
GPR108	56927	genome.wustl.edu	37	19	6731281	6731281	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	19	6731281	6731281	C	T	SNP	GPR108	NM_001080452.1	human	genbank	58_37c	-1	provisional	missense	c.1363	p.V455I	0.995	HMMPfam_Lung_7-TM_R	HMMPfam_Lung_7-TM_R	-	no_errors
GPR37	2861	genome.wustl.edu	37	7	124387321	124387321	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	T	T	T	G	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	7	124387321	124387321	T	G	SNP	GPR37	NM_005302.2	human	genbank	58_37c	-1	provisional	missense	c.1100	p.Q367P	1.000	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
GRIA1	2890	genome.wustl.edu	37	5	153144138	153144138	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	5	153144138	153144138	G	C	SNP	GRIA1	NM_000827.3	human	genbank	58_37c	+1	reviewed	missense	c.1968	p.Q656H	1.000	HMMPfam_Lig_chan,HMMSmart_SM00079,superfamily_Periplasmic binding protein-like II	HMMPfam_Lig_chan,HMMSmart_SM00079,HMMPfam_ANF_receptor,HMMPfam_Lig_chan-Glu_bd,superfamily_Periplasmic binding protein-like I,superfamily_Periplasmic binding protein-like II	-	no_errors
HDAC6	10013	genome.wustl.edu	37	X	48682346	48682346	+	Silent	SNP	T	T	C	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	X	48682346	48682346	T	C	SNP	HDAC6	NM_006044.2	human	genbank	58_37c	+1	reviewed	silent	c.3318	p.A1106	0.885	NULL	HMMPfam_Hist_deacetyl,HMMPfam_zf-UBP,HMMSmart_ZnF_UBP,superfamily_SSF52768	-	no_errors
HEATR1	55127	genome.wustl.edu	37	1	236739603	236739603	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	1	236739603	236739603	C	G	SNP	HEATR1	NM_018072.4	human	genbank	58_37c	-1	validated	missense	c.3000	p.L1000F	0.824	superfamily_ARM-type_fold	HMMPfam_HEAT,HMMPfam_BP28CT,superfamily_ARM-type_fold	-	no_errors
HERC5	51191	genome.wustl.edu	37	4	89388332	89388332	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	4	89388332	89388332	C	A	SNP	HERC5	NM_016323.2	human	genbank	58_37c	+1	reviewed	nonsense	c.1034	p.S345*	0.324	superfamily_RCC1/BLIP-II	HMMPfam_RCC1,PatternScan_RCC1_2,HMMPfam_HECT,HMMSmart_SM00119,superfamily_Hect E3 ligase catalytic domain,superfamily_RCC1/BLIP-II	-	no_errors
HIBCH	26275	genome.wustl.edu	37	2	191117010	191117010	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	2	191117010	191117010	C	G	SNP	HIBCH	NM_014362.3	human	genbank	58_37c	-1	reviewed	missense	c.541	p.G181R	1.000	HMMPfam_ECH,superfamily_ClpP/crotonase	HMMPfam_ECH,superfamily_ClpP/crotonase	-	no_errors
HIST1H2BC	8347	genome.wustl.edu	37	6	26123995	26123995	+	Silent	SNP	C	C	G	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	6	26123995	26123995	C	G	SNP	HIST1H2BC	NM_003526.2	human	genbank	58_37c	-1	reviewed	silent	c.138	p.L46	1.000	HMMSmart_SM00427,HMMPfam_Histone,superfamily_Histone-fold	HMMSmart_SM00427,PatternScan_HISTONE_H2B,HMMPfam_Histone,superfamily_Histone-fold	-	no_errors
HSD17B4	3295	genome.wustl.edu	37	5	118824925	118824925	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	5	118824925	118824925	C	G	SNP	HSD17B4	NM_000414.2	human	genbank	58_37c	+1	reviewed	missense	c.661	p.L221V	0.672	superfamily_NAD(P)-bd	HMMPfam_adh_short,PatternScan_ADH_SHORT,HMMPfam_MaoC_dehydratas,HMMPfam_SCP2,superfamily_NAD(P)-bd,superfamily_SCP2,superfamily_SSF54637	-	no_errors
HSPA4	3308	genome.wustl.edu	37	5	132412489	132412489	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	5	132412489	132412489	G	C	SNP	HSPA4	NM_002154.3	human	genbank	58_37c	+1	validated	missense	c.807	p.E269D	1.000	HMMPfam_HSP70,superfamily_SSF53067	HMMPfam_HSP70,PatternScan_HSP70_1,PatternScan_HSP70_2,PatternScan_HSP70_3,superfamily_SSF100920,superfamily_SSF100934,superfamily_SSF53067	-	no_errors
HSPG2	3339	genome.wustl.edu	37	1	22206964	22206964	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	1	22206964	22206964	G	C	SNP	HSPG2	ENST00000374695	human	ensembl	58_37c	-1	known	missense	c.2087	p.T696S	0.997	HMMPfam_Laminin_B,HMMSmart_SM00281	HMMPfam_Laminin_B,HMMPfam_SEA,HMMSmart_SM00200,HMMSmart_SM00282,HMMSmart_SM00179,HMMPfam_Laminin_EGF,HMMSmart_SM00180,PatternScan_EGF_LAM_1,HMMPfam_Ldl_recept_a,HMMSmart_SM00192,PatternScan_LDLRA_1,superfamily_LDL receptor-like module,HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_EGF,HMMSmart_SM00181,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_1,HMMPfam_Laminin_G_2,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_I-set,HMMPfam_V-set,HMMPfam_ig,HMMSmart_SM00281,superfamily_Immunoglobulin,superfamily_EGF/Laminin	-	no_errors
ITIH1	3697	genome.wustl.edu	37	3	52820422	52820422	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	3	52820422	52820422	C	G	SNP	ITIH1	NM_002215.2	human	genbank	58_37c	+1	reviewed	missense	c.1705	p.L569V	1.000	NULL	HMMPfam_VWA,HMMSmart_SM00327,HMMSmart_SM00609,HMMPfam_ITI_HC_C,HMMPfam_VIT,superfamily_vWA-like	-	no_errors
KAT2A	2648	genome.wustl.edu	37	17	40266620	40266620	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	17	40266620	40266620	G	A	SNP	KAT2A	NM_021078.2	human	genbank	58_37c	-1	validated	silent	c.2022	p.I674	0.998	NULL	HMMPfam_Acetyltransf_1,HMMPfam_Bromodomain,HMMSmart_SM00297,superfamily_Bromodomain,HMMPfam_PCAF_N,superfamily_Acyl-CoA N-acyltransferases (Nat),PatternScan_BROMODOMAIN_1	-	no_errors
KIAA0195	9772	genome.wustl.edu	37	17	73491664	73491664	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	17	73491664	73491664	C	G	SNP	KIAA0195	NM_014738.4	human	genbank	58_37c	+1	validated	missense	c.2884	p.L962V	1.000	NULL	superfamily_Calcium ATPase transmembrane domain M	-	no_errors
KIAA1841	84542	genome.wustl.edu	37	2	61343192	61343192	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	2	61343192	61343192	A	G	SNP	KIAA1841	NM_001129993.1	human	genbank	58_37c	+1	validated	missense	c.1823	p.K608R	0.971	NULL	NULL	-	no_errors
KRT73	319101	genome.wustl.edu	37	12	53002195	53002195	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	12	53002195	53002195	C	T	SNP	KRT73	NM_175068.2	human	genbank	58_37c	-1	reviewed	missense	c.1408	p.A470T	0.000	NULL	HMMPfam_Filament,PatternScan_IF	-	no_errors
KRT85	3891	genome.wustl.edu	37	12	52760852	52760852	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	12	52760852	52760852	T	A	SNP	KRT85	NM_002283.3	human	genbank	58_37c	-1	reviewed	missense	c.338	p.D113V	1.000	NULL	HMMPfam_Filament,PatternScan_IF	-	no_errors
KRTAP20-3	0	genome.wustl.edu	37	21	32015243	32015243	+	Silent	SNP	C	C	A	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	21	32015243	32015243	C	A	SNP	KRTAP20-3	NM_001128077.1	human	genbank	58_37c	+1	validated	silent	c.36	p.G12	0.126	NULL	NULL	-	no_errors
LETM1	3954	genome.wustl.edu	37	4	1838173	1838173	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	4	1838173	1838173	C	T	SNP	LETM1	NM_012318.2	human	genbank	58_37c	-1	reviewed	missense	c.721	p.E241K	1.000	HMMPfam_LETM1	HMMPfam_LETM1,PatternScan_EF_HAND_1	-	no_errors
LMOD1	25802	genome.wustl.edu	37	1	201869266	201869266	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	1	201869266	201869266	T	C	SNP	LMOD1	NM_012134.2	human	genbank	58_37c	-1	reviewed	missense	c.875	p.E292G	0.001	HMMPfam_Tropomodulin	HMMSmart_WH2,HMMPfam_Tropomodulin,superfamily_SSF52047	-	no_errors
LOC100129126	0	genome.wustl.edu	37	7	63441740	63441740	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	7	63441740	63441740	G	C	SNP	LOC100129126	XM_001715328.2	human	genbank	58_37c	-1	model	missense	c.22	p.L8V	0.746	superfamily_KRAB domain (Kruppel-associated box Pfam 01352)	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_V1R	-	no_errors
LOC100289074	0	genome.wustl.edu	37	17	81082678	81082678	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	17	81082678	81082678	G	A	SNP	LOC100289074	XM_002343591.1	human	genbank	58_37c	+1	model	missense	c.575	p.R192H	0.821	NULL	NULL	-	no_errors
LOC400986	400986	genome.wustl.edu	37	2	96546211	96546211	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	2	96546211	96546211	C	T	SNP	LOC400986	XM_001717763.2	human	genbank	58_37c	-1	model	missense	c.2386	p.A796T	0.002	NULL	NULL	-	no_errors
LRRC70	0	genome.wustl.edu	37	5	61875866	61875866	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	5	61875866	61875866	C	T	SNP	LRRC70	NM_181506.4	human	genbank	58_37c	+1	validated	nonsense	c.601	p.Q201*	0.994	HMMPfam_LRR_1,HMMSmart_LRR_TYP,superfamily_SSF52058	HMMSmart_LRRNT,HMMPfam_LRRCT,HMMSmart_LRRCT,HMMPfam_LRR_1,HMMSmart_LRR_TYP,superfamily_SSF52058	-	no_errors
MADD	8567	genome.wustl.edu	37	11	47296330	47296330	+	Silent	SNP	C	C	A	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	11	47296330	47296330	C	A	SNP	MADD	NM_003682.3	human	genbank	58_37c	+1	reviewed	silent	c.279	p.I93	1.000	HMMPfam_uDENN,HMMSmart_SM00800	HMMPfam_DENN,HMMSmart_SM00799,HMMPfam_dDENN,HMMSmart_SM00801,HMMPfam_uDENN,HMMSmart_SM00800	-	no_errors
MAP3K2	10746	genome.wustl.edu	37	2	128084359	128084359	+	Silent	SNP	T	T	A	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	2	128084359	128084359	T	A	SNP	MAP3K2	NM_006609.3	human	genbank	58_37c	-1	reviewed	silent	c.501	p.P167	0.625	NULL	HMMPfam_PB1,HMMSmart_SM00666,HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
MAPK6	5597	genome.wustl.edu	37	15	52356303	52356303	+	Silent	SNP	T	T	C	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	15	52356303	52356303	T	C	SNP	MAPK6	NM_002748.3	human	genbank	58_37c	+1	reviewed	silent	c.1272	p.C424	0.998	NULL	HMMSmart_S_TKc,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
METTL11B	149281	genome.wustl.edu	37	1	170129793	170129793	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	1	170129793	170129793	G	T	SNP	METTL11B	NM_001136107.1	human	genbank	58_37c	+1	validated	missense	c.289	p.D97Y	1.000	HMMPfam_DUF858,superfamily_SSF53335	HMMPfam_DUF858,superfamily_SSF53335	-	no_errors
MS4A15	219995	genome.wustl.edu	37	11	60540906	60540906	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	11	60540906	60540906	G	A	SNP	MS4A15	NM_001098835.1	human	genbank	58_37c	+1	validated	silent	c.447	p.A149	0.717	HMMPfam_CD20	PatternScan_IG_MHC,HMMPfam_CD20	-	no_errors
MUC16	94025	genome.wustl.edu	37	19	9086543	9086543	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	19	9086543	9086543	G	T	SNP	MUC16	NM_024690.2	human	genbank	58_37c	-1	validated	missense	c.5272	p.P1758T	0.000	NULL	HMMPfam_SEA,HMMSmart_SM00200,PatternScan_ATPASE_ALPHA_BETA,superfamily_SEA domain	-	no_errors
MX1	4599	genome.wustl.edu	37	21	42824598	42824598	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	21	42824598	42824598	G	A	SNP	MX1	NM_001144925.1	human	genbank	58_37c	+1	reviewed	silent	c.1560	p.L520	0.000	HMMPfam_Dynamin_M	HMMPfam_Dynamin_M,HMMPfam_Dynamin_N,HMMSmart_DYNc,HMMPfam_GED,HMMSmart_GED,PatternScan_DYNAMIN,superfamily_SSF52540	-	no_errors
MYCBP2	23077	genome.wustl.edu	37	13	77754280	77754280	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	13	77754280	77754280	C	T	SNP	MYCBP2	NM_015057.4	human	genbank	58_37c	-1	validated	silent	c.5001	p.A1667	0.323	NULL	HMMPfam_RCC1,PatternScan_RCC1_2,HMMSmart_SM00184,superfamily_Galactose-binding domain-like,superfamily_RCC1/BLIP-II,HMMPfam_PHR,superfamily_E set domains,superfamily_RING/U-box	-	no_errors
MYH11	4629	genome.wustl.edu	37	16	15833955	15833955	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	16	15833955	15833955	C	G	SNP	MYH11	NM_001040114.1	human	genbank	58_37c	-1	reviewed	missense	c.2971	p.E991Q	1.000	NULL	HMMPfam_IQ,HMMSmart_IQ,HMMPfam_Myosin_head,HMMSmart_MYSc,HMMPfam_Myosin_tail_1,HMMPfam_Myosin_N,superfamily_SSF52540	-	no_errors
MYH11	4629	genome.wustl.edu	37	16	15850316	15850316	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	16	15850316	15850316	G	T	SNP	MYH11	NM_001040114.1	human	genbank	58_37c	-1	reviewed	missense	c.1652	p.A551D	1.000	HMMPfam_Myosin_head,HMMSmart_MYSc,superfamily_SSF52540	HMMPfam_IQ,HMMSmart_IQ,HMMPfam_Myosin_head,HMMSmart_MYSc,HMMPfam_Myosin_tail_1,HMMPfam_Myosin_N,superfamily_SSF52540	-	no_errors
MYO7B	4648	genome.wustl.edu	37	2	128366364	128366364	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	2	128366364	128366364	G	A	SNP	MYO7B	NM_001080527.1	human	genbank	58_37c	+1	provisional	missense	c.2725	p.V909I	0.002	NULL	HMMPfam_IQ,HMMSmart_SM00015,HMMPfam_MyTH4,HMMSmart_SM00139,HMMSmart_SM00326,superfamily_SH3-domain,HMMPfam_Myosin_head,HMMSmart_SM00242,HMMPfam_SH3_2,HMMPfam_FERM_M,superfamily_Second domain of FERM,HMMSmart_SM00295,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
NBAS	51594	genome.wustl.edu	37	2	15378705	15378705	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	2	15378705	15378705	C	T	SNP	NBAS	NM_015909.2	human	genbank	58_37c	-1	validated	missense	c.5830	p.A1944T	0.000	NULL	superfamily_WD40 repeat-like,HMMPfam_Sec39,PatternScan_RIBOSOMAL_S14	-	no_errors
NCRNA00152	0	genome.wustl.edu	37	2	87820957	87820964	+	RNA	DEL	TCGGTTTC	TCGGTTTC	-	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	TCGGTTTC	TCGGTTTC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	2	87820957	87820964	TCGGTTTC	-	DEL	NCRNA00152	NR_024204.1	human	genbank	58_37c	+1	validated	rna	NULL	NULL	0.000:0.000:0.000:0.001:0.000:0.000:0.000:0.000	-	-	-	no_errors
NPAT	4863	genome.wustl.edu	37	11	108040720	108040720	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	11	108040720	108040720	C	T	SNP	NPAT	NM_002519.2	human	genbank	58_37c	-1	validated	missense	c.2836	p.V946I	1.000	NULL	HMMSmart_SM00667	-	no_errors
NTNG1	22854	genome.wustl.edu	37	1	107963749	107963749	+	Silent	SNP	T	T	C	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	1	107963749	107963749	T	C	SNP	NTNG1	NM_001113228.1	human	genbank	58_37c	+1	validated	silent	c.1197	p.V399	1.000	NULL	HMMPfam_Laminin_EGF,HMMSmart_EGF_Lam,HMMSmart_EGF,HMMPfam_Laminin_N,HMMSmart_LamNT,PatternScan_EGF_1,HMMPfam_EGF_2,superfamily_SSF57196	-	no_errors
NUDT21	11051	genome.wustl.edu	37	16	56481707	56481707	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	A	A	A	C	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	16	56481707	56481707	A	C	SNP	NUDT21	NM_007006.2	human	genbank	58_37c	-1	reviewed	missense	c.311	p.F104C	1.000	HMMPfam_NUDIX	HMMPfam_NUDIX	-	no_errors
NUP98	4928	genome.wustl.edu	37	11	3752719	3752725	+	Frame_Shift_Del	DEL	CCGGACT	CCGGACT	-	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	CCGGACT	CCGGACT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	11	3752719	3752725	CCGGACT	-	DEL	NUP98	NM_016320.4	human	genbank	58_37c	-1	reviewed	frame_shift_del	c.1632_1626	p.R542fs	0.695:0.999:0.998:0.666:1.000:1.000:1.000	NULL	HMMPfam_Nucleoporin2,superfamily_Peptidase_S59,superfamily_SSF88633	-	no_errors
OR2G3	81469	genome.wustl.edu	37	1	247768964	247768964	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	1	247768964	247768964	T	C	SNP	OR2G3	NM_001001914.1	human	genbank	58_37c	+1	provisional	missense	c.77	p.V26A	0.001	superfamily_Family A G protein-coupled receptor-like	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
OR2T10	127069	genome.wustl.edu	37	1	248756246	248756246	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	1	248756246	248756246	G	T	SNP	OR2T10	NM_001004693.1	human	genbank	58_37c	-1	provisional	missense	c.824	p.S275Y	0.039	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
OR2T34	127068	genome.wustl.edu	37	1	248737771	248737771	+	Silent	SNP	G	G	T	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	1	248737771	248737771	G	T	SNP	OR2T34	NM_001001821.1	human	genbank	58_37c	-1	provisional	silent	c.288	p.T96	0.000	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
OR4M1	441670	genome.wustl.edu	37	14	20249295	20249295	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	14	20249295	20249295	G	A	SNP	OR4M1	NM_001005500.1	human	genbank	58_37c	+1	provisional	missense	c.814	p.V272M	0.349	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
OR7D2	162998	genome.wustl.edu	37	19	9297338	9297338	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	19	9297338	9297338	A	G	SNP	OR7D2	NM_175883.1	human	genbank	58_37c	+1	provisional	missense	c.881	p.N294S	0.878	superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
P4HB	5034	genome.wustl.edu	37	17	79803027	79803027	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	17	79803027	79803027	T	A	SNP	P4HB	NM_000918.3	human	genbank	58_37c	-1	reviewed	missense	c.1439	p.D480V	0.966	NULL	superfamily_Thioredoxin-like,HMMPfam_Thioredoxin,PatternScan_THIOREDOXIN_1	-	no_errors
PCDHB16	57717	genome.wustl.edu	37	5	140562836	140562836	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	5	140562836	140562836	C	T	SNP	PCDHB16	NM_020957.1	human	genbank	58_37c	+1	reviewed	silent	c.702	p.D234	0.381	HMMSmart_CA,PatternScan_CADHERIN_1,superfamily_Cadherin	HMMPfam_Cadherin,HMMSmart_CA,PatternScan_CADHERIN_1,HMMPfam_Cadherin_2,superfamily_Cadherin	-	no_errors
PCNXL2	80003	genome.wustl.edu	37	1	233395012	233395012	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	1	233395012	233395012	G	C	SNP	PCNXL2	NM_014801.3	human	genbank	58_37c	-1	provisional	missense	c.596	p.A199G	0.050	NULL	HMMPfam_Pecanex_C,PatternScan_DNAJ_1	-	no_errors
PDGFRA	5156	genome.wustl.edu	37	4	55156541	55156541	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	4	55156541	55156541	G	C	SNP	PDGFRA	NM_006206.4	human	genbank	58_37c	+1	reviewed	missense	c.2942	p.R981P	0.677	NULL	HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,PatternScan_RECEPTOR_TYR_KIN_III,HMMSmart_SM00220,HMMSmart_SM00408,HMMSmart_SM00409,PatternScan_PROTEIN_KINASE_TYR,superfamily_Protein kinase-like (PK-like),HMMPfam_I-set,HMMPfam_ig,PatternScan_PROTEIN_KINASE_ATP,superfamily_Immunoglobulin	-	no_errors
PELO	53918	genome.wustl.edu	37	5	52096347	52096347	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	5	52096347	52096347	G	T	SNP	PELO	NM_015946.4	human	genbank	58_37c	+1	reviewed	missense	c.119	p.R40L	1.000	HMMPfam_eRF1_1	HMMPfam_eRF1_1,HMMPfam_eRF1_2,HMMPfam_eRF1_3,superfamily_L30e-like	-	no_errors
PGLYRP4	57115	genome.wustl.edu	37	1	153312921	153312921	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	1	153312921	153312921	G	A	SNP	PGLYRP4	NM_020393.2	human	genbank	58_37c	-1	validated	silent	c.760	p.L254	0.021	HMMPfam_Amidase_2,HMMSmart_SM00644,superfamily_N-acetylmuramoyl-L-alanine amidase-like,HMMSmart_SM00701	HMMPfam_Amidase_2,HMMSmart_SM00644,superfamily_N-acetylmuramoyl-L-alanine amidase-like,HMMSmart_SM00701	-	no_errors
PHF21B	112885	genome.wustl.edu	37	22	45312307	45312307	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	22	45312307	45312307	G	A	SNP	PHF21B	NM_138415.3	human	genbank	58_37c	-1	validated	silent	c.417	p.L139	0.028	NULL	HMMSmart_SM00249,superfamily_FYVE/PHD zinc finger,HMMPfam_PHD	-	no_errors
PLBD2	196463	genome.wustl.edu	37	12	113812735	113812735	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	12	113812735	113812735	A	G	SNP	PLBD2	NM_173542.3	human	genbank	58_37c	+1	validated	missense	c.782	p.H261R	1.000	HMMPfam_Phospholip_B	HMMPfam_Phospholip_B	-	no_errors
PLCL2	23228	genome.wustl.edu	37	3	17053574	17053574	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	3	17053574	17053574	G	A	SNP	PLCL2	NM_015184.5	human	genbank	58_37c	+1	validated	nonsense	c.2358	p.W786*	1.000	NULL	HMMPfam_C2,HMMSmart_C2,HMMPfam_PI-PLC-X,HMMSmart_PLCXc,HMMPfam_PI-PLC-Y,HMMSmart_PLCYc,HMMPfam_PH,HMMSmart_PH,superfamily_C2_CaLB,HMMPfam_efhand_like,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_SSF47473,superfamily_SSF50729	-	no_errors
PLCL2	23228	genome.wustl.edu	37	3	17131237	17131249	+	Frame_Shift_Del	DEL	CTTTTGAAATATG	CTTTTGAAATATG	-	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	CTTTTGAAATATG	CTTTTGAAATATG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	3	17131237	17131249	CTTTTGAAATATG	-	DEL	PLCL2	NM_015184.5	human	genbank	58_37c	+1	validated	frame_shift_del	c.2839_2851	p.L948fs	1.000:1.000:0.989:0.991:1.000:1.000:1.000:1.000:1.000:1.000:0.999:0.779:1.000	NULL	HMMPfam_C2,HMMSmart_C2,HMMPfam_PI-PLC-X,HMMSmart_PLCXc,HMMPfam_PI-PLC-Y,HMMSmart_PLCYc,HMMPfam_PH,HMMSmart_PH,superfamily_C2_CaLB,HMMPfam_efhand_like,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_SSF47473,superfamily_SSF50729	-	no_errors
PLEC	0	genome.wustl.edu	37	8	144994265	144994265	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	8	144994265	144994265	G	C	SNP	PLEC	NM_201380.2	human	genbank	58_37c	-1	reviewed	missense	c.10135	p.P3379A	0.671	NULL	HMMPfam_Plectin,HMMSmart_SM00250,PatternScan_ACTININ_1,PatternScan_ACTININ_2,HMMPfam_CH,HMMSmart_SM00033,HMMPfam_S10_plectin,superfamily_Calponin-homology domain CH-domain,HMMSmart_SM00150,superfamily_Spectrin repeat,superfamily_Plakin repeat	-	no_errors
PNLIPRP3	119548	genome.wustl.edu	37	10	118236225	118236225	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	10	118236225	118236225	A	T	SNP	PNLIPRP3	NM_001011709.2	human	genbank	58_37c	+1	validated	missense	c.1234	p.N412Y	0.836	HMMPfam_PLAT,superfamily_Lipase/lipooxygenase domain (PLAT/LH2 domain)	HMMPfam_PLAT,PatternScan_HMG_COA_REDUCTASE_1,PatternScan_LIPASE_SER,superfamily_Lipase/lipooxygenase domain (PLAT/LH2 domain),HMMPfam_Lipase,superfamily_alpha/beta-Hydrolases	-	no_errors
POLR1B	84172	genome.wustl.edu	37	2	113321941	113321941	+	Splice_Site	SNP	A	A	G	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	2	113321941	113321941	A	G	SNP	POLR1B	NM_019014.4	human	genbank	58_37c	+1	validated	splice_site	c.1613-2	e10-2	1.000	-	-	-	no_errors
POLR2A	5430	genome.wustl.edu	37	17	7405859	7405859	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	17	7405859	7405859	C	G	SNP	POLR2A	NM_000937.3	human	genbank	58_37c	+1	validated	missense	c.2595	p.I865M	1.000	HMMPfam_RNA_pol_Rpb1_5,superfamily_SSF64484	HMMPfam_RNA_pol_Rpb1_R,PatternScan_RNA_POL_II_REPEAT,HMMPfam_RNA_pol_Rpb1_2,HMMPfam_RNA_pol_Rpb1_3,HMMPfam_RNA_pol_Rpb1_7,HMMPfam_RNA_pol_Rpb1_6,HMMPfam_RNA_pol_Rpb1_1,HMMPfam_RNA_pol_Rpb1_5,HMMPfam_RNA_pol_Rpb1_4,superfamily_SSF64484	-	no_errors
POPDC2	64091	genome.wustl.edu	37	3	119379073	119379073	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	3	119379073	119379073	C	T	SNP	POPDC2	NM_022135.2	human	genbank	58_37c	-1	reviewed	silent	c.198	p.L66	0.998	NULL	HMMPfam_Popeye,superfamily_cAMP-binding domain-like	-	no_errors
PRB4	5545	genome.wustl.edu	37	12	11461466	11461466	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	12	11461466	11461466	G	C	SNP	PRB4	NM_002723.3	human	genbank	58_37c	-1	reviewed	missense	c.451	p.Q151E	0.001	NULL	NULL	-	no_errors
PREX2	80243	genome.wustl.edu	37	8	69033276	69033276	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	8	69033276	69033276	T	A	SNP	PREX2	NM_024870.2	human	genbank	58_37c	+1	validated	missense	c.3716	p.F1239Y	1.000	NULL	"HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_DBL homology domain (DH-domain),HMMPfam_DEP,HMMSmart_SM00049,PatternScan_DH_1,HMMSmart_SM00228,superfamily_PDZ domain-like,HMMPfam_PH,HMMSmart_SM00233,superfamily_""Winged helix"" DNA-binding domain,superfamily_PH domain-like"	-	no_errors
PTK2	5747	genome.wustl.edu	37	8	141753376	141753376	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	8	141753376	141753376	C	A	SNP	PTK2	NM_005607.3	human	genbank	58_37c	-1	reviewed	missense	c.1754	p.G585V	1.000	HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,superfamily_Kinase_like,PatternScan_FERM_2	HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,HMMPfam_Focal_AT,superfamily_Focal_AT,PatternScan_PROTEIN_KINASE_TYR,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,PatternScan_FERM_2,HMMPfam_FERM_M,superfamily_FERM_3-hlx,HMMSmart_B41	-	no_errors
RELN	5649	genome.wustl.edu	37	7	103216144	103216144	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	7	103216144	103216144	C	A	SNP	RELN	NM_005045.3	human	genbank	58_37c	-1	reviewed	missense	c.4154	p.R1385I	1.000	NULL	HMMPfam_Reeler,HMMSmart_EGF,superfamily_Sialidase,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF_2,superfamily_SSF57196	-	no_errors
RSPO1	284654	genome.wustl.edu	37	1	38078565	38078565	+	Silent	SNP	G	G	T	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	1	38078565	38078565	G	T	SNP	RSPO1	NM_001038633.2	human	genbank	58_37c	-1	reviewed	silent	c.654	p.G218	0.995	NULL	HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat,HMMSmart_SM00261,superfamily_Growth factor receptor domain	-	no_errors
SET	6418	genome.wustl.edu	37	9	131453346	131453351	+	Splice_Site	DEL	GTTTTT	GTTTTT	-	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	GTTTTT	GTTTTT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	9	131453346	131453351	GTTTTT	-	DEL	SET	ENST00000372688	human	ensembl	58_37c	+1	known	splice_site_del	c.43+1_43+1	e2+1	0.000:0.000:0.000:0.000:0.000:0.003	-	-	-	no_errors
SFMBT2	57713	genome.wustl.edu	37	10	7318923	7318923	+	Silent	SNP	T	T	C	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	10	7318923	7318923	T	C	SNP	SFMBT2	NM_001029880.1	human	genbank	58_37c	-1	provisional	silent	c.801	p.E267	0.057	HMMSmart_SM00561	HMMSmart_SM00454,HMMPfam_MBT,HMMSmart_SM00561,superfamily_SAM/Pointed domain,HMMPfam_SAM_2,superfamily_Tudor/PWWP/MBT	-	no_errors
SFXN5	94097	genome.wustl.edu	37	2	73215386	73215386	+	Splice_Site	SNP	C	C	T	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	2	73215386	73215386	C	T	SNP	SFXN5	NM_144579.2	human	genbank	58_37c	-1	validated	splice_site	c.625+1	e10+1	1.000	-	-	-	no_errors
SLCO4C1	353189	genome.wustl.edu	37	5	101572605	101572605	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	5	101572605	101572605	A	G	SNP	SLCO4C1	NM_180991.4	human	genbank	58_37c	-1	validated	missense	c.2132	p.V711A	0.227	NULL	HMMPfam_OATP,HMMPfam_Kazal_2,superfamily_MFS_gen_substrate_transporter,superfamily_SSF100895	-	no_errors
SLITRK6	84189	genome.wustl.edu	37	13	86368270	86368270	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	13	86368270	86368270	C	A	SNP	SLITRK6	NM_032229.2	human	genbank	58_37c	-1	validated	nonsense	c.2374	p.G792*	0.997	NULL	HMMPfam_LRRCT,HMMSmart_SM00082,HMMPfam_LRR_1,HMMSmart_SM00369,HMMSmart_SM00365,superfamily_L domain-like	-	no_errors
SMARCA4	6597	genome.wustl.edu	37	19	11170528	11170528	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	19	11170528	11170528	G	T	SNP	SMARCA4	NM_001128849.1	human	genbank	58_37c	+1	reviewed	nonsense	c.4831	p.E1611*	1.000	NULL	HMMPfam_SNF2_N,HMMPfam_Bromodomain,HMMSmart_BROMO,superfamily_Bromodomain,HMMPfam_Helicase_C,HMMSmart_HELICc,HMMPfam_HSA,HMMPfam_BRK,HMMSmart_BRK,HMMSmart_HSA,HMMSmart_DEXDc,HMMPfam_QLQ,PatternScan_BROMODOMAIN_1,superfamily_SSF52540	-	no_errors
SMG1	23049	genome.wustl.edu	37	16	18869547	18869547	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	16	18869547	18869547	C	A	SNP	SMG1	NM_015092.4	human	genbank	58_37c	-1	reviewed	missense	c.4179	p.W1393C	1.000	superfamily_ARM repeat	HMMPfam_HEAT,HMMPfam_PI3_PI4_kinase,HMMSmart_SM00146,HMMPfam_FATC,superfamily_Protein kinase-like (PK-like),superfamily_ARM repeat,PatternScan_PI3_4_KINASE_2	-	no_errors
SP4	6671	genome.wustl.edu	37	7	21550872	21550872	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	7	21550872	21550872	C	T	SNP	SP4	NM_003112.3	human	genbank	58_37c	+1	validated	silent	c.2340	p.N780	1.000	NULL	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
STAT3	6774	genome.wustl.edu	37	17	40468877	40468877	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	17	40468877	40468877	G	A	SNP	STAT3	NM_139276.2	human	genbank	58_37c	-1	reviewed	silent	c.2187	p.R729	1.000	NULL	HMMPfam_SH2,superfamily_p53-like transcription factors,HMMPfam_STAT_int,superfamily_Transcription factor STAT-4 N-domain,HMMPfam_STAT_alpha,HMMPfam_STAT_bind,superfamily_STAT,superfamily_SH2 domain	-	no_errors
SYK	6850	genome.wustl.edu	37	9	93607735	93607735	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	9	93607735	93607735	C	G	SNP	SYK	NM_003177.5	human	genbank	58_37c	+1	reviewed	missense	c.437	p.A146G	1.000	superfamily_SH2 domain	HMMPfam_SH2,HMMSmart_SM00252,HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_TYR,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,superfamily_SH2 domain	-	no_errors
TARS	6897	genome.wustl.edu	37	5	33456148	33456148	+	Silent	SNP	T	T	C	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	5	33456148	33456148	T	C	SNP	TARS	NM_152295.3	human	genbank	58_37c	+1	reviewed	silent	c.735	p.N245	1.000	superfamily_ThrRS/AlaRS common domain	HMMPfam_tRNA-synt_2b,HMMPfam_TGS,HMMPfam_HGTP_anticodon,superfamily_Anticodon-binding domain of Class II aaRS,superfamily_TGS-like,HMMPfam_tRNA_SAD,superfamily_ThrRS/AlaRS common domain,superfamily_Class II aaRS and biotin synthetases	-	no_errors
TAS2R16	50833	genome.wustl.edu	37	7	122635007	122635007	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	A	A	A	C	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	7	122635007	122635007	A	C	SNP	TAS2R16	NM_016945.2	human	genbank	58_37c	-1	reviewed	missense	c.682	p.S228A	0.044	HMMPfam_TAS2R	HMMPfam_TAS2R	-	no_errors
TCF12	6938	genome.wustl.edu	37	15	57545524	57545524	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	15	57545524	57545524	C	A	SNP	TCF12	NM_207036.1	human	genbank	58_37c	+1	reviewed	missense	c.1325	p.A442D	1.000	NULL	HMMPfam_HLH,HMMSmart_HLH,superfamily_HLH_basic	-	no_errors
TCHH	7062	genome.wustl.edu	37	1	152083921	152083921	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	1	152083921	152083921	T	C	SNP	TCHH	NM_007113.2	human	genbank	58_37c	-1	provisional	missense	c.1772	p.K591R	0.001	NULL	PatternScan_S100_CABP,HMMPfam_S_100,PatternScan_EF_HAND_1,superfamily_SSF47473	-	no_errors
TCIRG1	10312	genome.wustl.edu	37	11	67818248	67818248	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	A	A	A	C	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	11	67818248	67818248	A	C	SNP	TCIRG1	NM_006019.2	human	genbank	58_37c	+1	reviewed	missense	c.2455	p.K819Q	1.000	HMMPfam_V_ATPase_I	HMMPfam_V_ATPase_I	-	no_errors
TDRKH	11022	genome.wustl.edu	37	1	151747553	151747553	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	1	151747553	151747553	C	G	SNP	TDRKH	NM_001083963.1	human	genbank	58_37c	-1	validated	missense	c.1524	p.M508I	0.002	NULL	HMMSmart_SM00333,HMMSmart_SM00322,HMMPfam_TUDOR,HMMPfam_KH_1,superfamily_Eukaryotic type KH-domain (KH-domain type I),superfamily_Tudor/PWWP/MBT	-	no_errors
TECPR2	9895	genome.wustl.edu	37	14	102901119	102901119	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	14	102901119	102901119	C	G	SNP	TECPR2	NM_014844.3	human	genbank	58_37c	+1	validated	missense	c.1965	p.S655R	0.000	NULL	HMMSmart_WD40,HMMPfam_Hyd_WA,HMMSmart_TECPR,superfamily_WD40_like,PatternScan_WD_REPEATS_1	-	no_errors
TET1	80312	genome.wustl.edu	37	10	70332118	70332118	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	10	70332118	70332118	G	A	SNP	TET1	NM_030625.2	human	genbank	58_37c	+1	validated	missense	c.23	p.R8K	0.980	NULL	HMMPfam_zf-CXXC	-	no_errors
TIGIT	201633	genome.wustl.edu	37	3	114018446	114018446	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	3	114018446	114018446	G	C	SNP	TIGIT	NM_173799.3	human	genbank	58_37c	+1	validated	missense	c.394	p.A132P	0.617	NULL	HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin	-	no_errors
TRABD	80305	genome.wustl.edu	37	22	50632861	50632861	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	22	50632861	50632861	G	T	SNP	TRABD	NM_025204.2	human	genbank	58_37c	+1	provisional	missense	c.205	p.A69S	0.994	NULL	HMMPfam_TraB	-	no_errors
TTC3	7267	genome.wustl.edu	37	21	38567987	38567987	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	21	38567987	38567987	G	C	SNP	TTC3	NM_001001894.1	human	genbank	58_37c	+1	validated	missense	c.5229	p.E1743D	0.000	NULL	HMMPfam_TPR_1,HMMSmart_RING,HMMPfam_zf-C3HC4,HMMSmart_TPR,superfamily_Spectrin,superfamily_SSF48452,superfamily_SSF57850	-	no_errors
TTN	7273	genome.wustl.edu	37	2	179398516	179398516	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	2	179398516	179398516	G	A	SNP	TTN	ENST00000356127	human	ensembl	58_37c	-1	known	missense	c.95116	p.R31706W	1.000	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_IG_MHC,HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,HMMPfam_PPAK,PatternScan_PROTEIN_KINASE_TYR,HMMPfam_I-set,HMMPfam_ig,HMMPfam_Titin_Z,HMMPfam_Pkinase,PatternScan_FGGY_KINASES_1,PatternScan_PEROXIDASE_1	-	no_errors
TTN	7273	genome.wustl.edu	37	2	179437368	179437368	+	Nonsense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	2	179437368	179437368	A	T	SNP	TTN	ENST00000356127	human	ensembl	58_37c	-1	known	nonsense	c.65781	p.Y21927*	0.996	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_IG_MHC,HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,HMMPfam_PPAK,PatternScan_PROTEIN_KINASE_TYR,HMMPfam_I-set,HMMPfam_ig,HMMPfam_Titin_Z,HMMPfam_Pkinase,PatternScan_FGGY_KINASES_1,PatternScan_PEROXIDASE_1	-	no_errors
TTN	7273	genome.wustl.edu	37	2	179441108	179441113	+	In_Frame_Del	DEL	CAGTGA	CAGTGA	-	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	CAGTGA	CAGTGA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	2	179441108	179441113	CAGTGA	-	DEL	TTN	ENST00000356127	human	ensembl	58_37c	-1	known	in_frame_del	c.62041_62036	p.VT20679in_frame_del	1.000:0.504:0.999:1.000:1.000:1.000	HMMPfam_fn3,HMMSmart_SM00060	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_IG_MHC,HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,HMMPfam_PPAK,PatternScan_PROTEIN_KINASE_TYR,HMMPfam_I-set,HMMPfam_ig,HMMPfam_Titin_Z,HMMPfam_Pkinase,PatternScan_FGGY_KINASES_1,PatternScan_PEROXIDASE_1	-	no_errors
UBE2E1	7324	genome.wustl.edu	37	3	23932006	23932006	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	3	23932006	23932006	C	G	SNP	UBE2E1	NM_003341.3	human	genbank	58_37c	+1	reviewed	missense	c.491	p.P164R	1.000	HMMPfam_UQ_con,HMMSmart_SM00212,superfamily_UBC-like	HMMPfam_UQ_con,HMMSmart_SM00212,PatternScan_UBIQUITIN_CONJUGAT_1,superfamily_UBC-like	-	no_errors
UBR4	23352	genome.wustl.edu	37	1	19464664	19464664	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	T	T	T	G	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	1	19464664	19464664	T	G	SNP	UBR4	NM_020765.2	human	genbank	58_37c	-1	validated	missense	c.8743	p.S2915R	1.000	NULL	HMMPfam_zf-UBR,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00396,superfamily_ARM repeat,PatternScan_ASP_GLU_RACEMASE_1	-	no_errors
UBR5	51366	genome.wustl.edu	37	8	103299695	103299695	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	8	103299695	103299695	G	A	SNP	UBR5	NM_015902.4	human	genbank	58_37c	-1	reviewed	silent	c.4923	p.S1641	1.000	NULL	HMMPfam_HECT,HMMSmart_HECTc,superfamily_HECT,HMMPfam_PABP,HMMSmart_PolyA,superfamily_PABP_HYD,HMMPfam_zf-UBR,HMMSmart_ZnF_UBR1	-	no_errors
UCHL5	51377	genome.wustl.edu	37	1	192998533	192998533	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	1	192998533	192998533	T	C	SNP	UCHL5	NM_015984.2	human	genbank	58_37c	-1	validated	missense	c.419	p.H140R	1.000	HMMPfam_Peptidase_C12,superfamily_Cysteine proteinases	HMMPfam_Peptidase_C12,superfamily_Cysteine proteinases	-	no_errors
UGT2B15	7366	genome.wustl.edu	37	4	69519794	69519794	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	4	69519794	69519794	T	C	SNP	UGT2B15	NM_001076.2	human	genbank	58_37c	-1	validated	missense	c.1274	p.D425G	0.980	HMMPfam_UDPGT,superfamily_UDP-Glycosyltransferase/glycogen phosphorylase	HMMPfam_UDPGT,PatternScan_UDPGT,superfamily_UDP-Glycosyltransferase/glycogen phosphorylase	-	no_errors
UNC5D	137970	genome.wustl.edu	37	8	35541224	35541224	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	8	35541224	35541224	T	A	SNP	UNC5D	NM_080872.2	human	genbank	58_37c	+1	validated	missense	c.730	p.S244T	1.000	HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin	PatternScan_SERPIN,HMMPfam_Death,HMMSmart_SM00005,HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat,HMMPfam_ZU5,HMMSmart_SM00218,HMMSmart_SM00408,HMMSmart_SM00409,superfamily_DEATH domain,HMMPfam_I-set,superfamily_Immunoglobulin	-	no_errors
USP25	29761	genome.wustl.edu	37	21	17205712	17205712	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	21	17205712	17205712	C	A	SNP	USP25	NM_013396.3	human	genbank	58_37c	+1	validated	missense	c.2039	p.T680K	1.000	NULL	HMMPfam_UCH,HMMPfam_UIM,HMMSmart_SM00726,superfamily_UBA-like,PatternScan_UCH_2_1,PatternScan_UCH_2_2,superfamily_Cysteine proteinases	-	no_errors
VASN	114990	genome.wustl.edu	37	16	4431912	4431912	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	16	4431912	4431912	C	A	SNP	VASN	NM_138440.2	human	genbank	58_37c	+1	validated	missense	c.1034	p.A345D	0.921	HMMSmart_LRRCT	HMMPfam_LRRNT,HMMSmart_LRRNT,HMMSmart_LRRCT,HMMPfam_LRR_1,HMMSmart_LRR_TYP,HMMPfam_fn3,HMMSmart_FN3,HMMPfam_EGF,HMMSmart_EGF,superfamily_FN_III-like,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_SSF52058,superfamily_SSF57196	-	no_errors
WDR11	55717	genome.wustl.edu	37	10	122646224	122646234	+	Frame_Shift_Del	DEL	AATCTGAACTT	AATCTGAACTT	-	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	AATCTGAACTT	AATCTGAACTT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	10	122646224	122646234	AATCTGAACTT	-	DEL	WDR11	NM_018117.11	human	genbank	58_37c	+1	reviewed	frame_shift_del	c.1997_2007	p.L669fs	1.000:1.000:1.000:1.000:0.751:1.000:1.000:1.000:1.000:1.000:0.996	superfamily_WD40_like	HMMSmart_WD40,superfamily_WD40_like,PatternScan_WD_REPEATS_1,HMMPfam_WD40	-	no_errors
XIRP1	165904	genome.wustl.edu	37	3	39229254	39229254	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	3	39229254	39229254	C	T	SNP	XIRP1	NM_194293.2	human	genbank	58_37c	-1	provisional	missense	c.1683	p.M561I	0.792	NULL	HMMPfam_Xin	-	no_errors
ZFP92	139735	genome.wustl.edu	37	X	152686529	152686529	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	X	152686529	152686529	G	A	SNP	ZFP92	NM_001136273.1	human	genbank	58_37c	+1	validated	missense	c.694	p.G232S	0.022	superfamily_SSF57667	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
ZNF101	94039	genome.wustl.edu	37	19	19790274	19790274	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	19	19790274	19790274	G	A	SNP	ZNF101	NM_033204.2	human	genbank	58_37c	+1	provisional	missense	c.476	p.R159H	0.935	NULL	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
ZNF318	24149	genome.wustl.edu	37	6	43323219	43323219	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	6	43323219	43323219	C	T	SNP	ZNF318	NM_014345.2	human	genbank	58_37c	-1	validated	missense	c.1853	p.R618Q	1.000	NULL	HMMSmart_SM00451,PatternScan_ZINC_FINGER_C2H2_1,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZNF394	84124	genome.wustl.edu	37	7	99097679	99097679	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	7	99097679	99097679	T	C	SNP	ZNF394	NM_032164.2	human	genbank	58_37c	-1	provisional	missense	c.38	p.D13G	0.012	NULL	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_SCAN,HMMSmart_SM00431,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZNF434	54925	genome.wustl.edu	37	16	3433091	3433091	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	16	3433091	3433091	G	C	SNP	ZNF434	NM_017810.2	human	genbank	58_37c	-1	provisional	missense	c.1219	p.Q407E	0.001	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
ZNF438	220929	genome.wustl.edu	37	10	31139084	31139084	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	10	31139084	31139084	G	A	SNP	ZNF438	NM_001143766.1	human	genbank	58_37c	-1	validated	nonsense	c.250	p.Q84*	1.000	NULL	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZNF528	84436	genome.wustl.edu	37	19	52918378	52918378	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	19	52918378	52918378	G	C	SNP	ZNF528	NM_032423.2	human	genbank	58_37c	+1	validated	missense	c.273	p.E91D	0.021	NULL	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZNF560	147741	genome.wustl.edu	37	19	9578743	9578743	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	19	9578743	9578743	C	A	SNP	ZNF560	NM_152476.2	human	genbank	58_37c	-1	validated	missense	c.880	p.G294C	0.048	NULL	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
ZNF81	347344	genome.wustl.edu	37	X	47774342	47774342	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	X	47774342	47774342	G	C	SNP	ZNF81	NM_007137.3	human	genbank	58_37c	+1	reviewed	missense	c.297	p.K99N	0.112	NULL	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
ZNF827	152485	genome.wustl.edu	37	4	146791465	146791465	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	4	146791465	146791465	C	T	SNP	ZNF827	NM_178835.3	human	genbank	58_37c	-1	validated	missense	c.1913	p.G638E	0.999	NULL	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
ZNRF1	84937	genome.wustl.edu	37	16	75138732	75138732	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	16	75138732	75138732	C	G	SNP	ZNRF1	NM_032268.4	human	genbank	58_37c	+1	reviewed	missense	c.571	p.L191V	1.000	HMMSmart_SM00184,HMMPfam_zf-C3HC4,superfamily_RING/U-box	HMMSmart_SM00184,HMMPfam_zf-C3HC4,superfamily_RING/U-box	-	no_errors
ZP2	7783	genome.wustl.edu	37	16	21212763	21212763	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0T0-01A-22D-A099-09	TCGA-A2-A0T0-10A-01D-A099-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	3c107ce4-a6ac-469b-b1c0-cd86674b5766	94629e5b-195d-495b-bfa5-e10c46930a47	16	21212763	21212763	C	G	SNP	ZP2	NM_003460.1	human	genbank	58_37c	-1	reviewed	missense	c.1621	p.V541L	1.000	HMMPfam_Zona_pellucida,HMMSmart_SM00241,PatternScan_ZP_1	HMMPfam_Zona_pellucida,HMMSmart_SM00241,PatternScan_ZP_1	-	no_errors
