Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	NormalRefReads_WU	NormalVarReads_WU	NormalVAF_WU	TumorRefReads_WU	TumorVarReads_WU	TumorVAF_WU	RNARefReads_WU	RNAVarReads_WU	RNAVAF_WU
ZBTB33	0	genome.wustl.edu	36	X	119271528	119271528	+	Missense_Mutation	SNP	T	T	A			TCGA-AB-2959-03A-01W-0733-08	TCGA-AB-2959-11A-01W-0732-08	T	T			T	T	Verified	Valid	Somatic	Phase_IV	Capture		1	dbGAP	Illumina HiSeq	8c783e8d-d1d7-41cc-9b4d-e651f11d8fea	5f663626-659e-41d2-a1f5-934bb2c3ad8e	X	119271528	119271528	T	A	SNP	ZBTB33	NM_006777.3	human	genbank	54_36p	+1	validated	missense	c.230	p.I77N	1.000	HMMSmart_SM00225,superfamily_POZ domain,HMMPfam_BTB	HMMSmart_SM00225,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,superfamily_POZ domain,HMMPfam_BTB,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors	83	3	3.45	6	27	81.82	6	28	82.35
PHF6	0	genome.wustl.edu	36	X	133375518	133375518	+	Splice_Site	SNP	G	G	T			TCGA-AB-2959-03A-01W-0733-08	TCGA-AB-2959-11A-01W-0732-08	G	G			G	G	Verified	Valid	Somatic	Phase_IV	Capture		1	dbGAP	Illumina HiSeq	8c783e8d-d1d7-41cc-9b4d-e651f11d8fea	5f663626-659e-41d2-a1f5-934bb2c3ad8e	X	133375518	133375518	G	T	SNP	PHF6	NM_001015877.1	human	genbank	54_36p	+1	reviewed	splice_site	c.586-1	e6-1	1.000	-	-	-	no_errors	64	0	0.00	12	22	64.71	0	0	0.00
MYOM3	0	genome.wustl.edu	36	1	24305101	24305101	+	Silent	SNP	G	G	A			TCGA-AB-2959-03A-01W-0733-08	TCGA-AB-2959-11A-01W-0732-08	G	G			G	G	Verified	Valid	Somatic	Phase_IV	Capture		1	dbGAP	Illumina HiSeq	8c783e8d-d1d7-41cc-9b4d-e651f11d8fea	5f663626-659e-41d2-a1f5-934bb2c3ad8e	1	24305101	24305101	G	A	SNP	MYOM3	NM_152372.3	human	genbank	54_36p	-1	validated	silent	c.456	p.R152	0.929	superfamily_Immunoglobulin	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,HMMPfam_I-set,HMMPfam_ig,PatternScan_EF_HAND_1,superfamily_Immunoglobulin	-	no_errors	46	0	0.00	22	10	31.25	NA	NA	NA
CCDC24	0	genome.wustl.edu	36	1	44233906	44233906	+	Missense_Mutation	SNP	C	C	A			TCGA-AB-2959-03A-01W-0733-08	TCGA-AB-2959-11A-01W-0732-08	C	C			C	C	Verified	Valid	Somatic	Phase_IV	Capture		1	dbGAP	Illumina HiSeq	8c783e8d-d1d7-41cc-9b4d-e651f11d8fea	5f663626-659e-41d2-a1f5-934bb2c3ad8e	1	44233906	44233906	C	A	SNP	CCDC24	NM_152499.1	human	genbank	54_36p	+1	provisional	missense	c.599	p.A200E	0.002	NULL	NULL	-	no_errors	43	0	0.00	16	8	33.33	0	1	100.00
CRB1	0	genome.wustl.edu	36	1	195657028	195657028	+	Missense_Mutation	SNP	G	G	A			TCGA-AB-2959-03A-01W-0733-08	TCGA-AB-2959-11A-01W-0732-08	G	G			G	G	Verified	Valid	Somatic	Phase_IV	Capture		1	dbGAP	Illumina HiSeq	8c783e8d-d1d7-41cc-9b4d-e651f11d8fea	5f663626-659e-41d2-a1f5-934bb2c3ad8e	1	195657028	195657028	G	A	SNP	CRB1	NM_201253.1	human	genbank	54_36p	+1	reviewed	missense	c.1447	p.A483T	0.005	superfamily_Concanavalin A-like lectins/glucanases	PatternScan_ASX_HYDROXYL,HMMSmart_SM00282,HMMSmart_SM00179,HMMPfam_EGF,HMMSmart_SM00181,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_2,PatternScan_EGF_1,PatternScan_EGF_2,PatternScan_EGF_CA,PatternScan_C_TYPE_LECTIN_1,superfamily_EGF/Laminin	-	no_errors	182	2	1.08	48	17	26.15	NA	NA	NA
TPO	0	genome.wustl.edu	36	2	1436476	1436476	+	Missense_Mutation	SNP	C	C	A			TCGA-AB-2959-03A-01W-0733-08	TCGA-AB-2959-11A-01W-0732-08	C	C			C	C	Verified	Valid	Somatic	Phase_IV	Capture		1	dbGAP	Illumina HiSeq	8c783e8d-d1d7-41cc-9b4d-e651f11d8fea	5f663626-659e-41d2-a1f5-934bb2c3ad8e	2	1436476	1436476	C	A	SNP	TPO	NM_000547.4	human	genbank	54_36p	+1	reviewed	missense	c.486	p.D162E	0.965	HMMPfam_An_peroxidase,superfamily_Heme-dependent peroxidases	PatternScan_ASX_HYDROXYL,HMMPfam_Sushi,HMMSmart_SM00032,HMMSmart_SM00179,HMMPfam_An_peroxidase,HMMSmart_SM00181,superfamily_Heme-dependent peroxidases,PatternScan_EGF_2,HMMPfam_EGF_CA,superfamily_Complement control module/SCR domain,PatternScan_EGF_CA,PatternScan_PEROXIDASE_1,superfamily_EGF/Laminin	-	no_errors	28	0	0.00	10	8	44.44	NA	NA	NA
APOB	0	genome.wustl.edu	36	2	21088903	21088903	+	Missense_Mutation	SNP	C	C	T			TCGA-AB-2959-03A-01W-0733-08	TCGA-AB-2959-11A-01W-0732-08	C	C			C	C	Verified	Valid	Somatic	Phase_IV	Capture		1	dbGAP	Illumina HiSeq	8c783e8d-d1d7-41cc-9b4d-e651f11d8fea	5f663626-659e-41d2-a1f5-934bb2c3ad8e	2	21088903	21088903	C	T	SNP	APOB	NM_000384.2	human	genbank	54_36p	-1	reviewed	missense	c.4342	p.V1448I	0.001	NULL	HMMPfam_Vitellogenin_N,HMMSmart_SM00638,HMMPfam_DUF1081,HMMPfam_DUF1943,superfamily_Lipovitellin-phosvitin complex beta-sheet shell regions,superfamily_Lipovitellin-phosvitin complex superhelical domain	-	no_errors	207	3	1.42	68	49	41.88	NA	NA	NA
UBR3	0	genome.wustl.edu	36	2	170626130	170626130	+	Silent	SNP	C	C	T			TCGA-AB-2959-03A-01W-0733-08	TCGA-AB-2959-11A-01W-0732-08	C	C			C	C	Verified	Valid	Somatic	Phase_IV	Capture		1	dbGAP	Illumina HiSeq	8c783e8d-d1d7-41cc-9b4d-e651f11d8fea	5f663626-659e-41d2-a1f5-934bb2c3ad8e	2	170626130	170626130	C	T	SNP	UBR3	NM_172070.3	human	genbank	54_36p	+1	validated	silent	c.1509	p.C503	1.000	NULL	HMMPfam_zf-C3HC4,superfamily_RING/U-box	-	no_errors	135	2	1.45	26	10	27.78	14	14	50.00
LOC152845	0	genome.wustl.edu	36	4	85384652	85384652	+	RNA	SNP	G	G	A			TCGA-AB-2959-03A-01W-0733-08	TCGA-AB-2959-11A-01W-0732-08	G	G			G	G	Verified	Valid	Somatic	Phase_IV	Capture		1	dbGAP	Illumina HiSeq	8c783e8d-d1d7-41cc-9b4d-e651f11d8fea	5f663626-659e-41d2-a1f5-934bb2c3ad8e	4	85384652	85384652	G	A	SNP	LOC152845	XR_038721.1	human	genbank	54_36p	+1	model	rna	NULL	NULL	1.000	-	-	-	pseudogene	113	0	0.00	24	20	45.45	1	0	0.00
RIMS1	0	genome.wustl.edu	36	6	73024680	73024680	+	Missense_Mutation	SNP	C	C	T			TCGA-AB-2959-03A-01W-0733-08	TCGA-AB-2959-11A-01W-0732-08	C	C			C	C	Verified	Valid	Somatic	Phase_IV	Capture		1	dbGAP	Illumina HiSeq	8c783e8d-d1d7-41cc-9b4d-e651f11d8fea	5f663626-659e-41d2-a1f5-934bb2c3ad8e	6	73024680	73024680	C	T	SNP	RIMS1	NM_014989.3	human	genbank	54_36p	+1	validated	missense	c.2902	p.R968C	1.000	NULL	HMMPfam_C2,HMMSmart_SM00239,HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),superfamily_FYVE/PHD zinc finger,PatternScan_GLYCOSYL_HYDROL_F1_1	-	no_errors	93	0	0.00	20	7	25.93	NA	NA	NA
DOCK5	0	genome.wustl.edu	36	8	25192027	25192027	+	Missense_Mutation	SNP	G	G	A			TCGA-AB-2959-03A-01W-0733-08	TCGA-AB-2959-11A-01W-0732-08	G	G			G	G	Verified	Valid	Somatic	Phase_IV	Capture		1	dbGAP	Illumina HiSeq	8c783e8d-d1d7-41cc-9b4d-e651f11d8fea	5f663626-659e-41d2-a1f5-934bb2c3ad8e	8	25192027	25192027	G	A	SNP	DOCK5	NM_024940.6	human	genbank	54_36p	+1	validated	missense	c.250	p.E84K	0.981	NULL	HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain	-	no_errors	90	0	0.00	33	22	40.00	8	8	50.00
LOC100133234	0	genome.wustl.edu	36	8	56529812	56529812	+	RNA	SNP	G	G	A			TCGA-AB-2959-03A-01W-0733-08	TCGA-AB-2959-11A-01W-0732-08	G	G			G	G	Verified	Valid	Somatic	Phase_IV	Capture		1	dbGAP	Illumina HiSeq	8c783e8d-d1d7-41cc-9b4d-e651f11d8fea	5f663626-659e-41d2-a1f5-934bb2c3ad8e	8	56529812	56529812	G	A	SNP	LOC100133234	XR_038021.1	human	genbank	54_36p	-1	model	rna	NULL	NULL	1.000	-	-	-	pseudogene	26	0	0.00	12	4	25.00	1	0	0.00
SLCO5A1	0	genome.wustl.edu	36	8	70907326	70907326	+	Missense_Mutation	SNP	C	C	T			TCGA-AB-2959-03A-01W-0733-08	TCGA-AB-2959-11A-01W-0732-08	C	C			C	C	Verified	Valid	Somatic	Phase_IV	Capture		1	dbGAP	Illumina HiSeq	8c783e8d-d1d7-41cc-9b4d-e651f11d8fea	5f663626-659e-41d2-a1f5-934bb2c3ad8e	8	70907326	70907326	C	T	SNP	SLCO5A1	NM_030958.1	human	genbank	54_36p	-1	reviewed	missense	c.137	p.C46Y	0.999	NULL	HMMSmart_KAZAL,HMMPfam_OATP,HMMPfam_Kazal_2,superfamily_MFS_gen_substrate_transporter,superfamily_SSF100895	-	no_errors	45	0	0.00	18	13	41.94	15	12	44.44
PLCE1	0	genome.wustl.edu	36	10	95781506	95781506	+	Missense_Mutation	SNP	T	T	C			TCGA-AB-2959-03A-01W-0733-08	TCGA-AB-2959-11A-01W-0732-08	T	T			T	T	Verified	Valid	Somatic	Phase_IV	Capture		1	dbGAP	Illumina HiSeq	8c783e8d-d1d7-41cc-9b4d-e651f11d8fea	5f663626-659e-41d2-a1f5-934bb2c3ad8e	10	95781506	95781506	T	C	SNP	PLCE1	NM_016341.3	human	genbank	54_36p	+1	validated	missense	c.713	p.M238T	0.287	NULL	HMMPfam_C2,HMMSmart_SM00239,HMMPfam_RA,HMMSmart_SM00314,HMMPfam_PI-PLC-X,HMMSmart_SM00148,HMMPfam_PI-PLC-Y,HMMSmart_SM00149,HMMPfam_RasGEF,HMMSmart_SM00147,superfamily_Ras GEF,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMPfam_efhand_like,superfamily_PLC-like phosphodiesterases,superfamily_EF-hand	-	no_errors	187	3	1.56	54	31	36.47	NA	NA	NA
NRAP	0	genome.wustl.edu	36	10	115347805	115347805	+	Missense_Mutation	SNP	G	G	T			TCGA-AB-2959-03A-01W-0733-08	TCGA-AB-2959-11A-01W-0732-08	G	G			G	G	Verified	Valid	Somatic	Phase_IV	Capture		1	dbGAP	Illumina HiSeq	8c783e8d-d1d7-41cc-9b4d-e651f11d8fea	5f663626-659e-41d2-a1f5-934bb2c3ad8e	10	115347805	115347805	G	T	SNP	NRAP	NM_198060.3	human	genbank	54_36p	-1	validated	missense	c.4245	p.D1415E	1.000	HMMSmart_SM00227	HMMPfam_Nebulin,HMMSmart_SM00227,HMMPfam_LIM,HMMSmart_SM00132,PatternScan_LIM_DOMAIN_1,superfamily_Glucocorticoid receptor-like (DNA-binding domain)	-	no_errors	68	2	2.86	32	14	30.43	NA	NA	NA
SCUBE2	0	genome.wustl.edu	36	11	9057523	9057523	+	Silent	SNP	G	G	A			TCGA-AB-2959-03A-01W-0733-08	TCGA-AB-2959-11A-01W-0732-08	G	G			G	G	Verified	Valid	Somatic	Phase_IV	Capture		1	dbGAP	Illumina HiSeq	8c783e8d-d1d7-41cc-9b4d-e651f11d8fea	5f663626-659e-41d2-a1f5-934bb2c3ad8e	11	9057523	9057523	G	A	SNP	SCUBE2	NM_020974.1	human	genbank	54_36p	-1	provisional	silent	c.366	p.D122	1.000	HMMSmart_SM00179,HMMSmart_SM00181,PatternScan_EGF_2,superfamily_EGF/Laminin	PatternScan_ASX_HYDROXYL,HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain,HMMSmart_SM00179,HMMPfam_EGF,HMMSmart_SM00181,superfamily_Growth factor receptor domain,HMMPfam_GCC2_GCC3,PatternScan_EGF_2,HMMPfam_EGF_CA,PatternScan_EGF_CA,superfamily_EGF/Laminin	-	no_errors	153	0	0.00	36	23	38.98	NA	NA	NA
CCDC67	0	genome.wustl.edu	36	11	92729775	92729775	+	Missense_Mutation	SNP	G	G	A			TCGA-AB-2959-03A-01W-0733-08	TCGA-AB-2959-11A-01W-0732-08	G	G			G	G	Verified	Valid	Somatic	Phase_IV	Capture		1	dbGAP	Illumina HiSeq	8c783e8d-d1d7-41cc-9b4d-e651f11d8fea	5f663626-659e-41d2-a1f5-934bb2c3ad8e	11	92729775	92729775	G	A	SNP	CCDC67	NM_181645.3	human	genbank	54_36p	+1	validated	missense	c.215	p.R72Q	0.999	NULL	NULL	-	no_errors	151	1	0.65	24	20	45.45	NA	NA	NA
AQP5	0	genome.wustl.edu	36	12	48643666	48643666	+	Missense_Mutation	SNP	T	T	C			TCGA-AB-2959-03A-01W-0733-08	TCGA-AB-2959-11A-01W-0732-08	T	T			T	T	Verified	Valid	Somatic	Phase_IV	Capture		1	dbGAP	Illumina HiSeq	8c783e8d-d1d7-41cc-9b4d-e651f11d8fea	5f663626-659e-41d2-a1f5-934bb2c3ad8e	12	48643666	48643666	T	C	SNP	AQP5	NM_001651.2	human	genbank	54_36p	+1	reviewed	missense	c.488	p.L163P	0.991	HMMPfam_MIP,superfamily_MIP	HMMPfam_MIP,PatternScan_MIP,superfamily_MIP	-	no_errors	21	1	4.55	4	4	50.00	NA	NA	NA
PABPC3	0	genome.wustl.edu	36	13	24568652	24568652	+	Missense_Mutation	SNP	C	C	G			TCGA-AB-2959-03A-01W-0733-08	TCGA-AB-2959-11A-01W-0732-08	C	C			C	C	Verified	Valid	Somatic	Phase_IV	Capture		1	dbGAP	Illumina HiSeq	8c783e8d-d1d7-41cc-9b4d-e651f11d8fea	5f663626-659e-41d2-a1f5-934bb2c3ad8e	13	24568652	24568652	C	G	SNP	PABPC3	NM_030979.2	human	genbank	54_36p	+1	validated	missense	c.316	p.L106V	0.998	HMMPfam_RRM_1,HMMSmart_SM00360,HMMSmart_SM00361,superfamily_RNA-binding domain RBD	HMMPfam_RRM_1,HMMSmart_SM00360,HMMPfam_PABP,HMMSmart_SM00517,superfamily_PABC (PABP) domain,HMMSmart_SM00361,superfamily_RNA-binding domain RBD	-	no_errors	105	1	0.94	57	10	14.93	NA	NA	NA
FLT1	0	genome.wustl.edu	36	13	27778869	27778869	+	Missense_Mutation	SNP	A	A	G			TCGA-AB-2959-03A-01W-0733-08	TCGA-AB-2959-11A-01W-0732-08	A	A			A	A	Verified	Valid	Somatic	Phase_IV	Capture		1	dbGAP	Illumina HiSeq	8c783e8d-d1d7-41cc-9b4d-e651f11d8fea	5f663626-659e-41d2-a1f5-934bb2c3ad8e	13	27778869	27778869	A	G	SNP	FLT1	NM_002019.3	human	genbank	54_36p	-1	validated	missense	c.3761	p.M1254T	0.733	NULL	HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,PatternScan_RECEPTOR_TYR_KIN_III,HMMSmart_SM00220,HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,PatternScan_PROTEIN_KINASE_TYR,superfamily_Protein kinase-like (PK-like),HMMPfam_I-set,HMMPfam_ig,PatternScan_PROTEIN_KINASE_ATP,superfamily_Immunoglobulin	-	no_errors	113	2	1.74	43	43	50.00	NA	NA	NA
PDS5B	0	genome.wustl.edu	36	13	32236670	32236670	+	Missense_Mutation	SNP	A	A	G			TCGA-AB-2959-03A-01W-0733-08	TCGA-AB-2959-11A-01W-0732-08	A	A			A	A	Verified	Valid	Somatic	Phase_IV	Capture		1	dbGAP	Illumina HiSeq	8c783e8d-d1d7-41cc-9b4d-e651f11d8fea	5f663626-659e-41d2-a1f5-934bb2c3ad8e	13	32236670	32236670	A	G	SNP	PDS5B	NM_015032.2	human	genbank	54_36p	+1	validated	missense	c.3562	p.T1188A	0.987	NULL	HMMPfam_HEAT,superfamily_ARM repeat,HMMPfam_AT_hook	-	no_errors	159	1	0.62	52	10	16.13	71	24	25.26
CEBPE	0	genome.wustl.edu	36	14	22656548	22656548	+	Silent	SNP	C	C	A			TCGA-AB-2959-03A-01W-0733-08	TCGA-AB-2959-11A-01W-0732-08	C	C			C	C	Verified	Valid	Somatic	Phase_IV	Capture		1	dbGAP	Illumina HiSeq	8c783e8d-d1d7-41cc-9b4d-e651f11d8fea	5f663626-659e-41d2-a1f5-934bb2c3ad8e	14	22656548	22656548	C	A	SNP	CEBPE	NM_001805.2	human	genbank	54_36p	-1	reviewed	silent	c.834	p.G278	0.996	NULL	HMMSmart_BRLZ,PatternScan_BZIP_BASIC,HMMPfam_bZIP_2	-	no_errors	92	0	0.00	32	36	52.94	NA	NA	NA
GZMB	0	genome.wustl.edu	36	14	24171052	24171052	+	Missense_Mutation	SNP	G	G	A			TCGA-AB-2959-03A-01W-0733-08	TCGA-AB-2959-11A-01W-0732-08	G	G			G	G	Verified	Valid	Somatic	Phase_IV	Capture		1	dbGAP	Illumina HiSeq	8c783e8d-d1d7-41cc-9b4d-e651f11d8fea	5f663626-659e-41d2-a1f5-934bb2c3ad8e	14	24171052	24171052	G	A	SNP	GZMB	NM_004131.4	human	genbank	54_36p	-1	reviewed	missense	c.452	p.A151V	0.000	HMMPfam_Trypsin,HMMSmart_SM00020,superfamily_Trypsin-like serine proteases	HMMPfam_Trypsin,HMMSmart_SM00020,superfamily_Trypsin-like serine proteases,PatternScan_TRYPSIN_HIS,PatternScan_TRYPSIN_SER	-	no_errors	70	0	0.00	17	18	50.00	16	3	15.79
CASC5	0	genome.wustl.edu	36	15	38703884	38703884	+	Missense_Mutation	SNP	G	G	C			TCGA-AB-2959-03A-01W-0733-08	TCGA-AB-2959-11A-01W-0732-08	G	G			G	G	Verified	Valid	Somatic	Phase_IV	Capture		1	dbGAP	Illumina HiSeq	8c783e8d-d1d7-41cc-9b4d-e651f11d8fea	5f663626-659e-41d2-a1f5-934bb2c3ad8e	15	38703884	38703884	G	C	SNP	CASC5	NM_170589.3	human	genbank	54_36p	+1	validated	missense	c.4208	p.G1403A	0.044	NULL	NULL	-	no_errors	99	1	1.00	21	18	46.15	30	12	28.57
IDH2	0	genome.wustl.edu	36	15	88432938	88432938	+	Missense_Mutation	SNP	C	C	T	rs121913502	unknown	TCGA-AB-2959-03A-01W-0733-08	TCGA-AB-2959-11A-01W-0732-08	C	C			C	C	Verified	Valid	Somatic	Phase_IV	Capture		1	dbGAP	Illumina HiSeq	8c783e8d-d1d7-41cc-9b4d-e651f11d8fea	5f663626-659e-41d2-a1f5-934bb2c3ad8e	15	88432938	88432938	C	T	SNP	IDH2	NM_002168.2	human	genbank	54_36p	-1	reviewed	missense	c.419	p.R140Q	1.000	HMMPfam_Iso_dh,superfamily_Isocitrate/Isopropylmalate dehydrogenase-like	HMMPfam_Iso_dh,PatternScan_IDH_IMDH,superfamily_Isocitrate/Isopropylmalate dehydrogenase-like	-	no_errors	75	1	1.32	22	16	42.11	82	80	49.08
NUP93	0	genome.wustl.edu	36	16	55389922	55389922	+	Missense_Mutation	SNP	C	C	A			TCGA-AB-2959-03A-01W-0733-08	TCGA-AB-2959-11A-01W-0732-08	C	C			C	C	Verified	Valid	Somatic	Phase_IV	Capture		1	dbGAP	Illumina HiSeq	8c783e8d-d1d7-41cc-9b4d-e651f11d8fea	5f663626-659e-41d2-a1f5-934bb2c3ad8e	16	55389922	55389922	C	A	SNP	NUP93	NM_014669.3	human	genbank	54_36p	+1	validated	missense	c.331	p.L111M	1.000	NULL	HMMPfam_Nic96	-	no_errors	189	0	0.00	68	9	11.69	25	8	24.24
RTN4RL1	0	genome.wustl.edu	36	17	1787436	1787436	+	Missense_Mutation	SNP	C	C	T			TCGA-AB-2959-03A-01W-0733-08	TCGA-AB-2959-11A-01W-0732-08	C	C			C	C	Verified	Valid	Somatic	Phase_IV	Capture		1	dbGAP	Illumina HiSeq	8c783e8d-d1d7-41cc-9b4d-e651f11d8fea	5f663626-659e-41d2-a1f5-934bb2c3ad8e	17	1787436	1787436	C	T	SNP	RTN4RL1	NM_178568.2	human	genbank	54_36p	-1	validated	missense	c.430	p.V144I	1.000	HMMSmart_SM00369,superfamily_L domain-like	HMMPfam_LRRNT,HMMSmart_SM00082,HMMPfam_LRR_1,HMMSmart_SM00369,superfamily_L domain-like	-	no_errors	23	0	0.00	18	10	34.48	NA	NA	NA
ZNF133	0	genome.wustl.edu	36	20	18245128	18245128	+	Missense_Mutation	SNP	T	T	G			TCGA-AB-2959-03A-01W-0733-08	TCGA-AB-2959-11A-01W-0732-08	T	T			T	T	Verified	Valid	Somatic	Phase_IV	Capture		1	dbGAP	Illumina HiSeq	8c783e8d-d1d7-41cc-9b4d-e651f11d8fea	5f663626-659e-41d2-a1f5-934bb2c3ad8e	20	18245128	18245128	T	G	SNP	ZNF133	NM_001083330.1	human	genbank	54_36p	+1	validated	missense	c.1630	p.S544A	0.980	superfamily_SSF57667	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors	125	1	0.79	26	20	43.48	0	1	100.00
RUNX1	0	genome.wustl.edu	36	21	35153652	35153652	+	Missense_Mutation	SNP	C	C	T	rs74315450	unknown	TCGA-AB-2959-03A-01W-0733-08	TCGA-AB-2959-11A-01W-0732-08	C	C			C	C	Verified	Valid	Somatic	Phase_IV	Capture		1	dbGAP	Illumina HiSeq	8c783e8d-d1d7-41cc-9b4d-e651f11d8fea	5f663626-659e-41d2-a1f5-934bb2c3ad8e	21	35153652	35153652	C	T	SNP	RUNX1	NM_001754.2	human	genbank	54_36p	-1	reviewed	missense	c.602	p.R201Q	1.000	superfamily_p53-like transcription factors,HMMPfam_Runt	superfamily_p53-like transcription factors,HMMPfam_Runt,HMMPfam_RunxI	-	no_errors	102	0	0.00	6	40	86.96	9	825	97.40
