Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ACCN3	0	genome.wustl.edu	37	7	150749825	150749825	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	7	150749825	150749825	A	G	SNP	ACCN3	NM_020322.2	human	genbank	58_37c	+1	reviewed	missense	c.1623	p.I541M	1.000	NULL	HMMPfam_ASC,PatternScan_ASC	-	no_errors
ADAMTSL3	0	genome.wustl.edu	37	15	84657563	84657563	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	15	84657563	84657563	G	A	SNP	ADAMTSL3	NM_207517.2	human	genbank	58_37c	+1	validated	silent	c.3837	p.L1279	0.094	HMMSmart_SM00409,superfamily_Immunoglobulin	HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_PLAC,HMMPfam_I-set,HMMPfam_ig,superfamily_Immunoglobulin	-	no_errors
AHNAK2	0	genome.wustl.edu	37	14	105416842	105416842	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	14	105416842	105416842	T	A	SNP	AHNAK2	NM_138420.2	human	genbank	58_37c	-1	validated	missense	c.4946	p.K1649M	0.025	NULL	HMMPfam_Involucrin,HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like	-	no_errors
AHRR	0	genome.wustl.edu	37	5	427993	427993	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	5	427993	427993	C	T	SNP	AHRR	NM_020731.3	human	genbank	58_37c	+1	reviewed	silent	c.846	p.L282	1.000	NULL	HMMSmart_SM00091,HMMPfam_HLH,HMMSmart_SM00353,HMMPfam_PAS,superfamily_PYP-like sensor domain (PAS domain)	-	no_errors
AIM2	0	genome.wustl.edu	37	1	159043162	159043162	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	1	159043162	159043162	G	A	SNP	AIM2	NM_004833.1	human	genbank	58_37c	-1	reviewed	missense	c.128	p.A43V	0.000	HMMPfam_PAAD_DAPIN,superfamily_DEATH_like	HMMPfam_PAAD_DAPIN,HMMPfam_HIN,superfamily_DEATH_like	-	no_errors
ALPK3	0	genome.wustl.edu	37	15	85382269	85382269	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	15	85382269	85382269	T	C	SNP	ALPK3	NM_020778.4	human	genbank	58_37c	+1	validated	silent	c.969	p.C323	1.000	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_Alpha_kinase,HMMSmart_SM00811,superfamily_Protein kinase-like (PK-like),HMMPfam_I-set,superfamily_Immunoglobulin	-	no_errors
ANGPTL5	0	genome.wustl.edu	37	11	101777841	101777841	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	11	101777841	101777841	G	A	SNP	ANGPTL5	NM_178127.4	human	genbank	58_37c	-1	validated	silent	c.234	p.F78	0.998	NULL	HMMPfam_Fibrinogen_C,HMMSmart_SM00186,PatternScan_FIBRIN_AG_C_DOMAIN,superfamily_Fibrinogen C-terminal domain-like	-	no_errors
ANKRD36	0	genome.wustl.edu	37	2	97864218	97864218	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	2	97864218	97864218	C	T	SNP	ANKRD36	ENST00000461153	human	ensembl	58_37c	+1	known	missense	c.2366	p.P789L	0.003	NULL	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat	-	no_errors
AOAH	0	genome.wustl.edu	37	7	36552787	36552788	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	7	36552787	36552788	-	G	INS	AOAH	ENST00000431169	human	ensembl	58_37c	-1	known	frame_shift_ins	c.1918_1917	p.Y639fs	0.000:0.000	NULL	HMMPfam_Lipase_GDSL,HMMPfam_SapB_2,HMMSmart_SM00741,superfamily_Saposin,PatternScan_EGF_1	-	no_errors
ATP1A4	0	genome.wustl.edu	37	1	160124840	160124840	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	1	160124840	160124840	T	C	SNP	ATP1A4	NM_144699.3	human	genbank	58_37c	+1	reviewed	silent	c.213	p.H71	0.002	HMMPfam_Cation_ATPase_N,superfamily_Calcium ATPase transmembrane domain M	HMMPfam_Cation_ATPase_N,HMMPfam_Hydrolase,HMMPfam_Cation_ATPase_C,HMMPfam_E1-E2_ATPase,PatternScan_ATPASE_E1_E2,superfamily_HAD-like,superfamily_Calcium ATPase transduction domain A,superfamily_Metal cation-transporting ATPase ATP-binding domain N,superfamily_Calcium ATPase transmembrane domain M	-	no_errors
BCS1L	0	genome.wustl.edu	37	2	219527298	219527298	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	2	219527298	219527298	C	T	SNP	BCS1L	NM_001079866.1	human	genbank	58_37c	+1	reviewed	missense	c.785	p.S262F	1.000	HMMSmart_SM00382,HMMPfam_AAA,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMSmart_SM00382,HMMPfam_AAA,PatternScan_AAA,HMMPfam_BCS1_N,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
C16orf63	0	genome.wustl.edu	37	16	15961319	15961319	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	16	15961319	15961319	A	C	SNP	C16orf63	NM_144600.2	human	genbank	58_37c	-1	provisional	missense	c.503	p.V168G	0.005	NULL	HMMSmart_LisH	-	no_errors
CAD	0	genome.wustl.edu	37	2	27447691	27447691	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	2	27447691	27447691	G	T	SNP	CAD	NM_004341.3	human	genbank	58_37c	+1	reviewed	missense	c.1333	p.G445W	1.000	HMMPfam_CPSase_L_chain,superfamily_PreATP-grasp-like	HMMPfam_GATase,PatternScan_DIHYDROOROTASE_1,PatternScan_DIHYDROOROTASE_2,HMMPfam_CPSase_sm_chain,superfamily_CP_synthsmall,HMMPfam_CPSase_L_D2,PatternScan_CPSASE_1,PatternScan_CPSASE_2,HMMPfam_CPSase_L_D3,superfamily_CarbamoylP_synth_lsu_oligo,HMMPfam_CPSase_L_chain,PatternScan_CARBAMOYLTRANSFERASE,superfamily_Asp/Orn_carbamoyltranf,HMMPfam_OTCace,HMMPfam_OTCace_N,HMMPfam_Amidohydro_1,superfamily_Metalo_hydrolase,HMMPfam_MGS,superfamily_PreATP-grasp-like,superfamily_SSF51556,superfamily_SSF52317,superfamily_SSF52335,superfamily_SSF56059	-	no_errors
CADM2	0	genome.wustl.edu	37	3	85984959	85984959	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	3	85984959	85984959	A	C	SNP	CADM2	NM_153184.3	human	genbank	58_37c	+1	validated	missense	c.722	p.Q241P	1.000	HMMSmart_IGc2,superfamily_SSF48726	HMMSmart_4.1m,HMMSmart_IGc2,HMMSmart_IG,HMMPfam_V-set,HMMPfam_ig,HMMPfam_C2-set_2,superfamily_SSF48726	-	no_errors
CDK14	0	genome.wustl.edu	37	7	90355956	90355956	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	7	90355956	90355956	G	A	SNP	CDK14	NM_012395.2	human	genbank	58_37c	+1	validated	missense	c.145	p.E49K	1.000	NULL	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,PatternScan_CYTOCHROME_B5_1	-	no_errors
CENPF	0	genome.wustl.edu	37	1	214816025	214816025	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	1	214816025	214816025	C	A	SNP	CENPF	NM_016343.3	human	genbank	58_37c	+1	reviewed	silent	c.4344	p.V1448	0.151	NULL	superfamily_Prefoldin,HMMPfam_Rb-bdg_C_Cenp-F,HMMPfam_Cenp-F_N,HMMPfam_Cenp-F_leu_zip,superfamily_Spectrin repeat	-	no_errors
CHD6	0	genome.wustl.edu	37	20	40049605	40049605	+	Silent	SNP	T	T	G	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	20	40049605	40049605	T	G	SNP	CHD6	NM_032221.3	human	genbank	58_37c	-1	reviewed	silent	c.5670	p.V1890	0.000	NULL	HMMPfam_SNF2_N,HMMPfam_Chromo,HMMSmart_SM00298,HMMPfam_Helicase_C,HMMSmart_SM00490,PatternScan_DEAH_ATP_HELICASE,HMMPfam_BRK,HMMSmart_SM00592,HMMSmart_SM00487,superfamily_Chromo domain-like,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
CLSTN2	0	genome.wustl.edu	37	3	140275475	140275475	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	3	140275475	140275475	C	T	SNP	CLSTN2	NM_022131.2	human	genbank	58_37c	+1	validated	missense	c.1795	p.R599W	0.943	NULL	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Concanavalin A-like lectins/glucanases,superfamily_Cadherin-like	-	no_errors
COL6A6	0	genome.wustl.edu	37	3	130318623	130318623	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	3	130318623	130318623	C	A	SNP	COL6A6	NM_001102608.1	human	genbank	58_37c	+1	provisional	missense	c.4622	p.P1541H	0.013	NULL	HMMPfam_VWA,HMMSmart_SM00327,HMMPfam_Collagen,superfamily_vWA-like	-	no_errors
DCUN1D1	0	genome.wustl.edu	37	3	182683349	182683349	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	3	182683349	182683349	C	A	SNP	DCUN1D1	NM_020640.2	human	genbank	58_37c	-1	validated	nonsense	c.196	p.E66*	1.000	NULL	HMMPfam_DUF298,superfamily_UBA-like	-	no_errors
DGKQ	0	genome.wustl.edu	37	4	961414	961414	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	4	961414	961414	C	G	SNP	DGKQ	NM_001347.2	human	genbank	58_37c	-1	reviewed	missense	c.910	p.D304H	1.000	HMMPfam_RA	HMMPfam_RA,HMMSmart_SM00314,HMMPfam_DAGK_acc,HMMSmart_SM00045,HMMPfam_DAGK_cat,HMMSmart_SM00046,HMMPfam_C1_1,HMMSmart_SM00109,PatternScan_ZF_DAG_PE_1,HMMPfam_C1_3,superfamily_Cysteine-rich domain	-	no_errors
DNAH10	0	genome.wustl.edu	37	12	124356102	124356102	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	12	124356102	124356102	A	C	SNP	DNAH10	NM_207437.3	human	genbank	58_37c	+1	validated	missense	c.7384	p.T2462P	1.000	HMMSmart_SM00382,HMMPfam_AAA_5,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMSmart_SM00382,HMMPfam_Dynein_heavy,HMMPfam_AAA_5,HMMPfam_DHC_N1,HMMPfam_DHC_N2,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
DNAJC14	0	genome.wustl.edu	37	12	56222324	56222325	+	Frame_Shift_Del	DEL	CT	CT	-	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	CT	CT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	12	56222324	56222325	CT	-	DEL	DNAJC14	NM_032364.5	human	genbank	58_37c	-1	validated	frame_shift_del	c.119_118	p.R40fs	1.000:1.000	NULL	HMMPfam_DnaJ,HMMSmart_SM00271,superfamily_Chaperone J-domain	-	no_errors
DNMBP	0	genome.wustl.edu	37	10	101715245	101715245	+	Silent	SNP	G	G	C	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	10	101715245	101715245	G	C	SNP	DNMBP	NM_015221.2	human	genbank	58_37c	-1	validated	silent	c.1986	p.L662	0.000	NULL	HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_DBL homology domain (DH-domain),PatternScan_DH_1,HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain,HMMPfam_BAR,HMMSmart_SM00721,HMMPfam_SH3_2	-	no_errors
DOCK2	0	genome.wustl.edu	37	5	169141180	169141180	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	5	169141180	169141180	C	T	SNP	DOCK2	NM_004946.2	human	genbank	58_37c	+1	validated	missense	c.1808	p.S603F	1.000	NULL	HMMSmart_SM00326,superfamily_SH3-domain,superfamily_Cytochrome c,HMMPfam_SH3_2	-	no_errors
DOCK4	0	genome.wustl.edu	37	7	111398727	111398727	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	7	111398727	111398727	C	T	SNP	DOCK4	NM_014705.3	human	genbank	58_37c	-1	reviewed	missense	c.4255	p.D1419N	1.000	NULL	HMMSmart_SM00326,superfamily_SH3-domain,HMMPfam_SH3_2	-	no_errors
EDA2R	0	genome.wustl.edu	37	X	65824309	65824309	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	X	65824309	65824309	T	C	SNP	EDA2R	NM_021783.2	human	genbank	58_37c	-1	reviewed	silent	c.306	p.Q102	1.000	NULL	HMMPfam_TNFR_c6,HMMSmart_SM00208,PatternScan_TNFR_NGFR_1,superfamily_TNF receptor-like	-	no_errors
ENSG00000186301	0	genome.wustl.edu	37	1	16975289	16975289	+	Splice_Site	SNP	T	T	A	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	1	16975289	16975289	T	A	SNP	ENSG00000186301	ENST00000334429	human	ensembl	58_37c	+1	known	splice_site	c.NULL	NULL	0.906	-	-	-	no_coding_region:pseudogene
ENSG00000198886	0	genome.wustl.edu	37	MT	11126	11126	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	MT	11126	11126	G	A	SNP	ENSG00000198886	ENST00000361381	human	ensembl	58_37c	+1	known	missense	c.367	p.E123K	NULL	HMMPfam_Oxidored_q1	HMMPfam_Oxidored_q5_N,HMMPfam_Oxidored_q1	-	no_stop_codon:bad_bp_length_for_coding_region:mismatch_between_exon_seq_and_reference
ENSG00000227561	0	genome.wustl.edu	37	17	44363394	44363394	+	Missense_Mutation	SNP	C	C	G	rs2907472	byHapMap	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	17	44363394	44363394	C	G	SNP	ENSG00000227561	ENST00000451529	human	ensembl	58_37c	-1	known	missense	c.243	p.Q81H	0.989	HMMSmart_SM00249,superfamily_FYVE/PHD zinc finger,HMMPfam_PHD	HMMPfam_Bromodomain,superfamily_Bromodomain,HMMSmart_SM00249,superfamily_FYVE/PHD zinc finger,HMMPfam_PHD	-	no_start_codon:no_stop_codon
EP400	0	genome.wustl.edu	37	12	132475210	132475212	+	In_Frame_Del	DEL	AGA	AGA	-	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	AGA	AGA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	12	132475210	132475212	AGA	-	DEL	EP400	NM_015409.3	human	genbank	58_37c	+1	validated	in_frame_del	c.2577_2579	p.E861in_frame_del	0.995:0.999:1.000	NULL	HMMPfam_SNF2_N,HMMPfam_Helicase_C,HMMSmart_HELICc,HMMPfam_HSA,superfamily_Homeodomain_like,HMMSmart_HSA,HMMSmart_DEXDc,superfamily_SSF52540	-	no_errors
ETS1	0	genome.wustl.edu	37	11	128426192	128426192	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	11	128426192	128426192	C	A	SNP	ETS1	NM_001143820.1	human	genbank	58_37c	-1	validated	missense	c.208	p.V70F	0.998	NULL	HMMPfam_Ets,HMMSmart_ETS,PatternScan_ETS_DOMAIN_1,PatternScan_ETS_DOMAIN_2,HMMPfam_SAM_PNT,HMMSmart_SAM_PNT,superfamily_SAM_homology,superfamily_SSF46785	-	no_errors
FAM47A	0	genome.wustl.edu	37	X	34149096	34149096	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	X	34149096	34149096	A	G	SNP	FAM47A	NM_203408.3	human	genbank	58_37c	-1	validated	missense	c.1300	p.S434P	0.005	NULL	NULL	-	no_errors
FER1L6	0	genome.wustl.edu	37	8	125029949	125029949	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	8	125029949	125029949	G	C	SNP	FER1L6	NM_001039112.2	human	genbank	58_37c	+1	validated	missense	c.2004	p.W668C	1.000	NULL	HMMPfam_C2,HMMSmart_SM00239,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMPfam_FerB,HMMPfam_FerI	-	no_errors
FMR1	0	genome.wustl.edu	37	X	147007128	147007128	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	X	147007128	147007128	A	C	SNP	FMR1	NM_002024.5	human	genbank	58_37c	+1	reviewed	missense	c.175	p.I59L	1.000	HMMPfam_Agenet	HMMSmart_SM00322,HMMPfam_Agenet,HMMPfam_KH_1,superfamily_Eukaryotic type KH-domain (KH-domain type I)	-	no_errors
GLG1	0	genome.wustl.edu	37	16	74501683	74501684	+	Frame_Shift_Del	DEL	AG	AG	-	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	AG	AG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	16	74501683	74501684	AG	-	DEL	GLG1	NM_012201.5	human	genbank	58_37c	-1	validated	frame_shift_del	c.2500_2499	p.F833fs	1.000:1.000	HMMPfam_Cys_rich_FGFR	HMMPfam_Cys_rich_FGFR	-	no_errors
GOLGB1	0	genome.wustl.edu	37	3	121410623	121410623	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	3	121410623	121410623	C	G	SNP	GOLGB1	NM_004487.3	human	genbank	58_37c	-1	validated	missense	c.7573	p.E2525Q	1.000	NULL	HMMSmart_SM00340,superfamily_Prefoldin,superfamily_Spectrin repeat	-	no_errors
GPAM	0	genome.wustl.edu	37	10	113920522	113920522	+	Silent	SNP	T	T	G	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	10	113920522	113920522	T	G	SNP	GPAM	NM_020918.4	human	genbank	58_37c	-1	validated	silent	c.1599	p.V533	1.000	NULL	HMMPfam_Acyltransferase,HMMSmart_PlsC,superfamily_SSF69593	-	no_errors
HDHD2	0	genome.wustl.edu	37	18	44660972	44660972	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	18	44660972	44660972	C	G	SNP	HDHD2	NM_032124.4	human	genbank	58_37c	-1	validated	missense	c.205	p.E69Q	1.000	HMMPfam_Hydrolase,superfamily_HAD-like	HMMPfam_Hydrolase,superfamily_HAD-like	-	no_errors
HEATR1	0	genome.wustl.edu	37	1	236766623	236766623	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	1	236766623	236766623	C	G	SNP	HEATR1	NM_018072.4	human	genbank	58_37c	-1	validated	missense	c.196	p.E66Q	1.000	NULL	HMMPfam_HEAT,HMMPfam_BP28CT,superfamily_ARM-type_fold	-	no_errors
HIST1H2BN	0	genome.wustl.edu	37	6	27806523	27806523	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	6	27806523	27806523	G	A	SNP	HIST1H2BN	NM_003520.3	human	genbank	58_37c	+1	reviewed	silent	c.84	p.K28	1.000	HMMSmart_SM00427,superfamily_Histone-fold	HMMSmart_SM00427,PatternScan_HISTONE_H2B,HMMPfam_Histone,superfamily_Histone-fold	-	no_errors
INPPL1	0	genome.wustl.edu	37	11	71942144	71942144	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	11	71942144	71942144	G	C	SNP	INPPL1	NM_001567.3	human	genbank	58_37c	+1	reviewed	missense	c.1408	p.G470R	1.000	HMMSmart_IPPc,HMMPfam_Exo_endo_phos,superfamily_Exo_endo_phos	HMMSmart_IPPc,HMMPfam_SH2,HMMSmart_SH2,HMMPfam_SAM_1,HMMSmart_SAM,HMMPfam_Exo_endo_phos,superfamily_Exo_endo_phos,superfamily_SAM_homology,superfamily_SSF55550	-	no_errors
KCNS3	0	genome.wustl.edu	37	2	18112363	18112363	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	2	18112363	18112363	C	G	SNP	KCNS3	NM_002252.3	human	genbank	58_37c	+1	reviewed	missense	c.88	p.Q30E	1.000	HMMSmart_BTB,HMMPfam_K_tetra,superfamily_BTB/POZ_fold	HMMSmart_BTB,HMMPfam_K_tetra,HMMPfam_Ion_trans,superfamily_BTB/POZ_fold,superfamily_SSF81324	-	no_errors
KCNT2	0	genome.wustl.edu	37	1	196394988	196394988	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	1	196394988	196394988	C	T	SNP	KCNT2	NM_198503.2	human	genbank	58_37c	-1	validated	missense	c.1115	p.R372K	1.000	superfamily_NAD(P)-binding Rossmann-fold domains	HMMPfam_BK_channel_a,HMMPfam_Ion_trans_2,superfamily_NAD(P)-binding Rossmann-fold domains,superfamily_Voltage-gated potassium channels	-	no_errors
KIAA1009	0	genome.wustl.edu	37	6	84881431	84881431	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	6	84881431	84881431	C	T	SNP	KIAA1009	NM_014895.2	human	genbank	58_37c	-1	validated	missense	c.2173	p.E725K	1.000	NULL	NULL	-	no_errors
KIAA1467	0	genome.wustl.edu	37	12	13208573	13208573	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	12	13208573	13208573	G	A	SNP	KIAA1467	NM_020853.1	human	genbank	58_37c	+1	validated	silent	c.126	p.Q42	1.000	NULL	NULL	-	no_errors
LNX1	0	genome.wustl.edu	37	4	54343119	54343119	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	4	54343119	54343119	C	T	SNP	LNX1	NM_001126328.1	human	genbank	58_37c	-1	reviewed	missense	c.1693	p.E565K	0.975	HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like	HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like,HMMSmart_SM00184,PatternScan_ZF_RING_1,HMMPfam_zf-C3HC4,superfamily_RING/U-box	-	no_errors
LOC283685	0	genome.wustl.edu	37	15	23685144	23685144	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	15	23685144	23685144	T	C	SNP	LOC283685	XM_002343322.1	human	genbank	58_37c	-1	model	missense	c.2033	p.E678G	0.003	NULL	NULL	-	no_errors
LRRIQ4	0	genome.wustl.edu	37	3	169550895	169550895	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	3	169550895	169550895	A	G	SNP	LRRIQ4	NM_001080460.1	human	genbank	58_37c	+1	provisional	missense	c.1454	p.E485G	0.039	superfamily_SSF52058	HMMPfam_IQ,HMMSmart_IQ,HMMPfam_LRR_1,superfamily_SSF52058	-	no_errors
LYZL2	0	genome.wustl.edu	37	10	30915760	30915760	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	10	30915760	30915760	T	C	SNP	LYZL2	NM_183058.2	human	genbank	58_37c	-1	validated	missense	c.223	p.K75E	1.000	HMMPfam_Lys,HMMSmart_LYZ1,superfamily_SSF53955	HMMPfam_Lys,HMMSmart_LYZ1,PatternScan_LACTALBUMIN_LYSOZYME_1,superfamily_SSF53955	-	no_errors
MAGI1	0	genome.wustl.edu	37	3	65372850	65372851	+	Frame_Shift_Del	DEL	TC	TC	-	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	TC	TC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	3	65372850	65372851	TC	-	DEL	MAGI1	NM_015520.1	human	genbank	58_37c	-1	reviewed	frame_shift_del	c.2468_2467	p.E823fs	1.000:1.000	superfamily_PDZ domain-like	HMMPfam_WW,HMMSmart_SM00456,PatternScan_WW_DOMAIN_1,superfamily_WW domain,HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like,HMMPfam_Guanylate_kin,HMMSmart_SM00072,PatternScan_GUANYLATE_KINASE_1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
MED12	0	genome.wustl.edu	37	X	70351944	70351944	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	X	70351944	70351944	A	T	SNP	MED12	NM_005120.2	human	genbank	58_37c	+1	reviewed	missense	c.4141	p.N1381Y	1.000	NULL	HMMPfam_Med12	-	no_errors
MTMR10	0	genome.wustl.edu	37	15	31233955	31233955	+	Silent	SNP	G	G	C	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	15	31233955	31233955	G	C	SNP	MTMR10	NM_017762.2	human	genbank	58_37c	-1	validated	silent	c.2052	p.L684	0.024	NULL	HMMPfam_Myotub-related,superfamily_PH domain-like,superfamily_(Phosphotyrosine protein) phosphatases II	-	no_errors
MUC2	0	genome.wustl.edu	37	11	1096456	1096456	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	11	1096456	1096456	G	C	SNP	MUC2	NM_002457.2	human	genbank	58_37c	+1	reviewed	missense	c.6469	p.D2157H	1.000	HMMPfam_VWD,HMMSmart_SM00216	HMMPfam_VWC,HMMSmart_SM00214,PatternScan_VWFC_1,HMMPfam_VWD,HMMSmart_SM00216,superfamily_Serine proterase inhibitors,HMMSmart_SM00041,PatternScan_CTCK_1,HMMPfam_Cys_knot,HMMSmart_SM00215,superfamily_PMP inhibitors,PatternScan_EGF_1,HMMPfam_C8	-	no_errors
N4BP1	0	genome.wustl.edu	37	16	48595832	48595832	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	16	48595832	48595832	C	T	SNP	N4BP1	NM_153029.3	human	genbank	58_37c	-1	validated	missense	c.722	p.G241E	0.999	NULL	NULL	-	no_errors
NCOR1	0	genome.wustl.edu	37	17	15965432	15965432	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	17	15965432	15965432	G	A	SNP	NCOR1	NM_006311.2	human	genbank	58_37c	-1	reviewed	nonsense	c.5374	p.Q1792*	1.000	NULL	HMMSmart_SM00717,superfamily_Homeodomain-like,HMMPfam_Myb_DNA-binding	-	no_errors
NF1	0	genome.wustl.edu	37	17	29553598	29553598	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	17	29553598	29553598	A	T	SNP	NF1	NM_001042492.2	human	genbank	58_37c	+1	reviewed	missense	c.2147	p.E716V	1.000	NULL	HMMSmart_SM00516,HMMPfam_RasGAP,HMMSmart_SM00323,PatternScan_RAS_GTPASE_ACTIV_1,superfamily_GTPase activation domain GAP	-	no_errors
NPY1R	0	genome.wustl.edu	37	4	164247139	164247139	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	4	164247139	164247139	C	T	SNP	NPY1R	NM_000909.4	human	genbank	58_37c	-1	validated	missense	c.568	p.D190N	0.001	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
OR6C76	0	genome.wustl.edu	37	12	55820676	55820676	+	Silent	SNP	C	C	G	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	12	55820676	55820676	C	G	SNP	OR6C76	NM_001005183.1	human	genbank	58_37c	+1	provisional	silent	c.639	p.L213	0.000	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
OSBP2	0	genome.wustl.edu	37	22	31289126	31289126	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	22	31289126	31289126	C	T	SNP	OSBP2	ENST00000431368	human	ensembl	58_37c	+1	known	missense	c.902	p.P301L	0.010	HMMPfam_Oxysterol_BP,PatternScan_OSBP	HMMPfam_Oxysterol_BP,PatternScan_OSBP	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region
PALM2-AKAP2	0	genome.wustl.edu	37	9	112930764	112930764	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	9	112930764	112930764	A	G	SNP	PALM2-AKAP2	NM_007203.4	human	genbank	58_37c	+1	validated	missense	c.3299	p.E1100G	1.000	NULL	HMMPfam_RII_binding_1	-	no_errors
PDE10A	0	genome.wustl.edu	37	6	165756912	165756912	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	6	165756912	165756912	C	T	SNP	PDE10A	NM_001130690.1	human	genbank	58_37c	-1	validated	missense	c.2065	p.A689T	0.765	HMMPfam_PDEase_I,superfamily_SSF109604	HMMPfam_PDEase_I,PatternScan_PDEASE_I,HMMPfam_GAF,HMMSmart_GAF,HMMSmart_HDc,superfamily_SSF109604,superfamily_SSF55781	-	no_errors
PIK3CA	0	genome.wustl.edu	37	3	178936095	178936095	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	3	178936095	178936095	A	G	SNP	PIK3CA	NM_006218.2	human	genbank	58_37c	+1	reviewed	missense	c.1637	p.Q546R	1.000	HMMPfam_PI3Ka,HMMSmart_PI3Ka,superfamily_ARM-type_fold	HMMSmart_C2,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,HMMPfam_PI3Ka,HMMSmart_PI3Ka,HMMPfam_PI3K_C2,HMMSmart_PI3K_C2,HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_C2_CaLB,superfamily_Kinase_like,superfamily_ARM-type_fold,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2,superfamily_SSF54236	-	no_errors
POF1B	0	genome.wustl.edu	37	X	84601036	84601036	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	X	84601036	84601036	G	C	SNP	POF1B	NM_024921.3	human	genbank	58_37c	-1	reviewed	missense	c.553	p.Q185E	0.997	NULL	NULL	-	no_errors
PPM1D	0	genome.wustl.edu	37	17	58740529	58740529	+	Nonsense_Mutation	SNP	C	C	A	rs146477590	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	17	58740529	58740529	C	A	SNP	PPM1D	NM_003620.2	human	genbank	58_37c	+1	reviewed	nonsense	c.1434	p.C478*	0.999	NULL	PatternScan_PP2C,HMMSmart_SM00332,superfamily_Protein serine/threonine phosphatase 2C catalytic domain,HMMPfam_PP2C	-	no_errors
PPP5C	0	genome.wustl.edu	37	19	46893337	46893337	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	19	46893337	46893337	T	C	SNP	PPP5C	NM_006247.2	human	genbank	58_37c	+1	provisional	missense	c.1385	p.I462T	1.000	HMMSmart_SM00156,superfamily_Metallo-dependent phosphatases	HMMPfam_TPR_1,HMMPfam_Metallophos,HMMSmart_SM00156,PatternScan_SER_THR_PHOSPHATASE,HMMPfam_PPP5,HMMSmart_SM00028,superfamily_TPR-like,superfamily_Metallo-dependent phosphatases	-	no_errors
PTEN	0	genome.wustl.edu	37	10	89711928	89711929	+	Frame_Shift_Del	DEL	AA	AA	-	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	AA	AA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	10	89711928	89711929	AA	-	DEL	PTEN	ENST00000371953	human	ensembl	58_37c	+1	known	frame_shift_del	c.546_547	p.K183fs	1.000:1.000	HMMSmart_SM00404,superfamily_(Phosphotyrosine protein) phosphatases II	HMMPfam_DSPc,HMMSmart_SM00404,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMPfam_PTEN_C2,PatternScan_TYR_PHOSPHATASE_1,superfamily_(Phosphotyrosine protein) phosphatases II	-	no_errors
PTPRO	0	genome.wustl.edu	37	12	15636960	15636960	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	12	15636960	15636960	C	T	SNP	PTPRO	NM_030667.1	human	genbank	58_37c	+1	reviewed	missense	c.128	p.S43L	0.998	superfamily_Fibronectin type III	HMMPfam_Y_phosphatase,HMMSmart_SM00194,HMMSmart_SM00404,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,PatternScan_TYR_PHOSPHATASE_1,superfamily_(Phosphotyrosine protein) phosphatases II	-	no_errors
RAB3IL1	0	genome.wustl.edu	37	11	61674931	61674931	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	11	61674931	61674931	C	G	SNP	RAB3IL1	NM_013401.2	human	genbank	58_37c	-1	provisional	missense	c.372	p.K124N	1.000	HMMPfam_Sec2p	HMMPfam_Sec2p	-	no_errors
RBBP7	0	genome.wustl.edu	37	X	16863950	16863950	+	Splice_Site	SNP	C	C	A	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	X	16863950	16863950	C	A	SNP	RBBP7	NM_002893.3	human	genbank	58_37c	-1	reviewed	splice_site	c.1209+1	e11+1	1.000	-	-	-	no_errors
RHPN2	0	genome.wustl.edu	37	19	33490566	33490566	+	Missense_Mutation	SNP	T	T	C	rs74582927	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	19	33490566	33490566	T	C	SNP	RHPN2	NM_033103.4	human	genbank	58_37c	-1	reviewed	missense	c.1151	p.Q384R	1.000	HMMPfam_BRO1	HMMPfam_HR1,HMMSmart_PDZ,superfamily_PDZ,HMMPfam_BRO1,HMMSmart_Hr1,superfamily_PKN_effector	-	no_errors
RIN1	0	genome.wustl.edu	37	11	66102191	66102191	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	11	66102191	66102191	G	A	SNP	RIN1	NM_004292.2	human	genbank	58_37c	-1	validated	missense	c.1079	p.P360L	0.976	NULL	HMMPfam_RA,HMMSmart_SM00314,HMMSmart_SM00252,HMMPfam_VPS9,HMMSmart_SM00167,superfamily_VPS9 domain (Pfam 02204),superfamily_SH2 domain	-	no_errors
SIX4	0	genome.wustl.edu	37	14	61180171	61180171	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	14	61180171	61180171	G	A	SNP	SIX4	NM_017420.4	human	genbank	58_37c	-1	reviewed	missense	c.2300	p.A767V	1.000	NULL	HMMPfam_Homeobox,HMMSmart_HOX,superfamily_Homeodomain_like,PatternScan_HOMEOBOX_1	-	no_errors
SLC24A4	0	genome.wustl.edu	37	14	92909751	92909751	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	14	92909751	92909751	G	A	SNP	SLC24A4	NM_153646.2	human	genbank	58_37c	+1	validated	missense	c.539	p.R180H	0.001	HMMPfam_Na_Ca_ex	HMMPfam_Na_Ca_ex	-	no_errors
SLC9A8	0	genome.wustl.edu	37	20	48479578	48479578	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	20	48479578	48479578	A	T	SNP	SLC9A8	NM_015266.1	human	genbank	58_37c	+1	validated	missense	c.826	p.T276S	1.000	HMMPfam_Na_H_Exchanger	HMMPfam_Na_H_Exchanger	-	no_errors
SLFN11	0	genome.wustl.edu	37	17	33679925	33679925	+	Nonsense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	17	33679925	33679925	G	C	SNP	SLFN11	NM_001104587.1	human	genbank	58_37c	-1	validated	nonsense	c.2156	p.S719*	0.000	superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_AAA_4,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
SMC3	0	genome.wustl.edu	37	10	112362317	112362317	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	10	112362317	112362317	G	A	SNP	SMC3	NM_005445.3	human	genbank	58_37c	+1	reviewed	missense	c.3191	p.G1064D	1.000	HMMPfam_SMC_N,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_SMC_N,HMMPfam_SMC_hinge,superfamily_Smc hinge domain,PatternScan_ABC_TRANSPORTER_1,superfamily_P-loop containing nucleoside triphosphate hydrolases,superfamily_BAG domain	-	no_errors
SS18	0	genome.wustl.edu	37	18	23658072	23658072	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	18	23658072	23658072	A	T	SNP	SS18	NM_001007559.1	human	genbank	58_37c	-1	validated	missense	c.199	p.S67T	1.000	HMMPfam_SSXT	HMMPfam_SSXT	-	no_errors
TAB3	0	genome.wustl.edu	37	X	30873374	30873374	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	X	30873374	30873374	G	A	SNP	TAB3	NM_152787.3	human	genbank	58_37c	-1	reviewed	silent	c.408	p.N136	0.999	NULL	HMMPfam_zf-RanBP,HMMSmart_SM00547,PatternScan_ZF_RANBP2_1,HMMPfam_CUE,HMMSmart_SM00546,superfamily_NZF domain	-	no_errors
TACC3	0	genome.wustl.edu	37	4	1742588	1742588	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	4	1742588	1742588	G	T	SNP	TACC3	NM_006342.1	human	genbank	58_37c	+1	reviewed	nonsense	c.2098	p.E700*	0.000	HMMPfam_TACC	HMMPfam_TACC	-	no_errors
TAOK1	0	genome.wustl.edu	37	17	27778590	27778590	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	17	27778590	27778590	C	T	SNP	TAOK1	NM_020791.1	human	genbank	58_37c	+1	validated	silent	c.24	p.G8	1.000	NULL	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
TBC1D4	0	genome.wustl.edu	37	13	75900540	75900540	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	13	75900540	75900540	G	A	SNP	TBC1D4	NM_014832.2	human	genbank	58_37c	-1	validated	missense	c.1826	p.S609F	1.000	NULL	HMMPfam_TBC,HMMSmart_SM00164,superfamily_Ypt/Rab-GAP domain of gyp1p,HMMPfam_PID,HMMSmart_SM00462,superfamily_PH domain-like	-	no_errors
TBC1D8	0	genome.wustl.edu	37	2	101638182	101638182	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	2	101638182	101638182	C	G	SNP	TBC1D8	NM_001102426.1	human	genbank	58_37c	-1	validated	missense	c.2743	p.E915Q	1.000	superfamily_EF-hand	HMMPfam_TBC,HMMSmart_SM00164,superfamily_Ypt/Rab-GAP domain of gyp1p,HMMPfam_GRAM,HMMSmart_SM00568,superfamily_EF-hand	-	no_errors
TBX22	0	genome.wustl.edu	37	X	79279656	79279656	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	X	79279656	79279656	C	T	SNP	TBX22	NM_001109878.1	human	genbank	58_37c	+1	reviewed	missense	c.451	p.R151C	1.000	HMMPfam_T-box,HMMSmart_TBOX,superfamily_P53_like_DNA_bnd	HMMPfam_T-box,HMMSmart_TBOX,superfamily_P53_like_DNA_bnd,PatternScan_TBOX_2,PatternScan_TBOX_1	-	no_errors
TCP10	0	genome.wustl.edu	37	6	167796310	167796310	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	6	167796310	167796310	C	T	SNP	TCP10	NM_004610.3	human	genbank	58_37c	-1	validated	missense	c.52	p.G18R	0.000	NULL	HMMPfam_Tcp10_C	-	no_errors
TLN1	0	genome.wustl.edu	37	9	35713277	35713277	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	9	35713277	35713277	C	T	SNP	TLN1	NM_006289.3	human	genbank	58_37c	-1	reviewed	missense	c.3268	p.D1090N	1.000	NULL	HMMPfam_I_LWEQ,HMMSmart_ILWEQ,HMMPfam_VBS,HMMPfam_Talin_middle,superfamily_Talin_cent,HMMPfam_FERM_N,PatternScan_FERM_1,PatternScan_FERM_2,HMMPfam_FERM_M,superfamily_FERM_3-hlx,HMMSmart_B41,superfamily_SSF109885,superfamily_SSF50729,superfamily_SSF54236	-	no_errors
TMCO2	0	genome.wustl.edu	37	1	40713810	40713810	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	1	40713810	40713810	C	G	SNP	TMCO2	NM_001008740.3	human	genbank	58_37c	+1	validated	missense	c.145	p.P49A	0.997	NULL	NULL	-	no_errors
TMPRSS6	0	genome.wustl.edu	37	22	37492106	37492106	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	22	37492106	37492106	G	A	SNP	TMPRSS6	NM_153609.2	human	genbank	58_37c	-1	reviewed	silent	c.456	p.F152	1.000	superfamily_SEA domain	superfamily_Spermadhesin CUB domain,HMMPfam_Trypsin,HMMSmart_SM00020,HMMPfam_Ldl_recept_a,HMMSmart_SM00192,PatternScan_LDLRA_1,superfamily_LDL receptor-like module,superfamily_Trypsin-like serine proteases,PatternScan_TRYPSIN_HIS,PatternScan_TRYPSIN_SER,superfamily_SEA domain	-	no_errors
TRIM23	0	genome.wustl.edu	37	5	64905155	64905155	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	5	64905155	64905155	C	A	SNP	TRIM23	NM_001656.3	human	genbank	58_37c	-1	reviewed	missense	c.959	p.W320L	1.000	HMMSmart_SM00502	HMMPfam_zf-B_box,HMMSmart_SM00336,HMMSmart_SM00184,HMMSmart_SM00175,HMMSmart_SM00502,HMMSmart_SM00178,HMMSmart_SM00177,PatternScan_ARF,HMMPfam_Arf,PatternScan_ZF_RING_1,HMMPfam_zf-C3HC4,superfamily_P-loop containing nucleoside triphosphate hydrolases,superfamily_RING/U-box	-	no_errors
TRIO	0	genome.wustl.edu	37	5	14358362	14358362	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	5	14358362	14358362	G	C	SNP	TRIO	NM_007118.2	human	genbank	58_37c	+1	validated	missense	c.2122	p.D708H	1.000	HMMSmart_SM00150,superfamily_Spectrin repeat	HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_DBL homology domain (DH-domain),HMMSmart_SM00219,HMMSmart_SM00516,superfamily_CRAL/TRIO domain,HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain,HMMPfam_PH,HMMSmart_SM00233,HMMPfam_Spectrin,HMMSmart_SM00220,HMMSmart_SM00408,HMMSmart_SM00409,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),HMMPfam_I-set,HMMPfam_Pkinase,HMMSmart_SM00150,superfamily_Spectrin repeat,superfamily_Immunoglobulin,superfamily_PH domain-like	-	no_errors
TTC37	0	genome.wustl.edu	37	5	94852114	94852114	+	Splice_Site	SNP	C	C	A	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	5	94852114	94852114	C	A	SNP	TTC37	NM_014639.2	human	genbank	58_37c	-1	provisional	splice_site	c.2578-1	e22-1	1.000	-	-	-	no_errors
UHRF1BP1	0	genome.wustl.edu	37	6	34803151	34803151	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	6	34803151	34803151	C	T	SNP	UHRF1BP1	NM_017754.3	human	genbank	58_37c	+1	validated	silent	c.750	p.L250	1.000	NULL	NULL	-	no_errors
USP47	0	genome.wustl.edu	37	11	11957978	11957978	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	11	11957978	11957978	C	T	SNP	USP47	NM_017944.3	human	genbank	58_37c	+1	validated	silent	c.1794	p.G598	0.674	NULL	HMMPfam_UCH,PatternScan_UCH_2_1,PatternScan_UCH_2_2,superfamily_Cysteine proteinases	-	no_errors
USP51	0	genome.wustl.edu	37	X	55513916	55513916	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	X	55513916	55513916	T	C	SNP	USP51	NM_201286.3	human	genbank	58_37c	-1	validated	missense	c.1457	p.Q486R	1.000	HMMPfam_UCH,superfamily_SSF54001	HMMPfam_UCH,HMMPfam_zf-UBP,PatternScan_UCH_2_1,PatternScan_UCH_2_2,superfamily_SSF54001	-	no_errors
USP6NL	0	genome.wustl.edu	37	10	11505403	11505403	+	Silent	SNP	A	A	C	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	10	11505403	11505403	A	C	SNP	USP6NL	NM_001080491.2	human	genbank	58_37c	-1	validated	silent	c.1575	p.G525	0.000	NULL	HMMPfam_TBC,HMMSmart_SM00164,superfamily_Ypt/Rab-GAP domain of gyp1p	-	no_errors
VWCE	0	genome.wustl.edu	37	11	61026260	61026260	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	11	61026260	61026260	G	A	SNP	VWCE	NM_152718.2	human	genbank	58_37c	-1	validated	missense	c.2755	p.R919C	0.033	NULL	PatternScan_ASX_HYDROXYL,HMMPfam_VWC,HMMSmart_SM00214,PatternScan_VWFC_1,HMMSmart_SM00179,HMMSmart_SM00181,HMMSmart_SM00215,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF_CA,HMMPfam_EGF_2,PatternScan_EGF_CA,PatternScan_C_TYPE_LECTIN_1,superfamily_EGF/Laminin	-	no_errors
XKR7	0	genome.wustl.edu	37	20	30585069	30585069	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	20	30585069	30585069	C	T	SNP	XKR7	NM_001011718.1	human	genbank	58_37c	+1	provisional	missense	c.1549	p.R517W	1.000	NULL	HMMSmart_IQ,HMMPfam_XK-related	-	no_errors
ZFYVE19	0	genome.wustl.edu	37	15	41100005	41100005	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	15	41100005	41100005	G	C	SNP	ZFYVE19	NM_001077268.1	human	genbank	58_37c	+1	validated	missense	c.218	p.G73A	0.000	HMMSmart_SM00064,superfamily_FYVE/PHD zinc finger	HMMPfam_FYVE,HMMSmart_SM00064,PatternScan_2FE2S_FER_1,superfamily_FYVE/PHD zinc finger	-	no_errors
ZMYM5	0	genome.wustl.edu	37	13	20398780	20398780	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	13	20398780	20398780	G	A	SNP	ZMYM5	NM_001142684.1	human	genbank	58_37c	-1	validated	missense	c.1847	p.S616L	1.000	NULL	HMMPfam_zf-FCS,HMMSmart_SM00746	-	no_errors
ZNF274	0	genome.wustl.edu	37	19	58724135	58724135	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	19	58724135	58724135	A	G	SNP	ZNF274	ENST00000424679	human	ensembl	58_37c	+1	known	missense	c.1585	p.T529A	1.000	superfamily_C2H2 and C2HC zinc fingers	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_SCAN,HMMSmart_SM00431,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZNF462	0	genome.wustl.edu	37	9	109746549	109746552	+	Frame_Shift_Del	DEL	TACC	TACC	-	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	TACC	TACC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	9	109746549	109746552	TACC	-	DEL	ZNF462	NM_021224.4	human	genbank	58_37c	+1	validated	frame_shift_del	c.6915_6918	p.T2306fs	0.998:1.000:1.000:1.000	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers,superfamily_beta-sandwich domain of Sec23/24	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers,superfamily_beta-sandwich domain of Sec23/24	-	no_errors
ZNF544	0	genome.wustl.edu	37	19	58774007	58774007	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	19	58774007	58774007	C	T	SNP	ZNF544	NM_014480.2	human	genbank	58_37c	+1	provisional	missense	c.2035	p.H679Y	0.843	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
ZNF786	0	genome.wustl.edu	37	7	148767947	148767947	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	7	148767947	148767947	G	T	SNP	ZNF786	NM_152411.3	human	genbank	58_37c	-1	validated	missense	c.1917	p.H639Q	1.000	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZNF883	0	genome.wustl.edu	37	9	115760106	115760106	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	9	115760106	115760106	C	G	SNP	ZNF883	NM_001101338.1	human	genbank	58_37c	-1	validated	missense	c.434	p.R145T	0.967	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZPBP2	0	genome.wustl.edu	37	17	38032947	38032947	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	17	38032947	38032947	C	T	SNP	ZPBP2	NM_199321.2	human	genbank	58_37c	+1	validated	missense	c.902	p.P301L	1.000	HMMPfam_Sp38	HMMPfam_Sp38	-	no_errors
ZPBP2	0	genome.wustl.edu	37	17	38033019	38033019	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AC-A23C-01A-12D-A167-09	TCGA-AC-A23C-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	91766158-e175-4270-bc01-8e853fc9f391	8d3b655a-a7d1-4a2d-90e6-a8b6aef059e2	17	38033019	38033019	C	G	SNP	ZPBP2	NM_199321.2	human	genbank	58_37c	+1	validated	missense	c.974	p.S325C	0.740	HMMPfam_Sp38	HMMPfam_Sp38	-	no_errors
