Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ABR	29	genome.wustl.edu	37	17	995066	995066	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	17	995066	995066	C	T	SNP	ABR	NM_021962.2	human	genbank	58_37c	-1	reviewed	missense	c.370	p.A124T	1.000	HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_DBL homology domain (DH-domain)	HMMPfam_C2,HMMSmart_SM00239,HMMPfam_RhoGAP,HMMSmart_SM00324,HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_DBL homology domain (DH-domain),PatternScan_DH_1,HMMPfam_PH,HMMSmart_SM00233,superfamily_GTPase activation domain GAP,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),superfamily_PH domain-like	-	no_errors
ALAS2	212	genome.wustl.edu	37	X	55046896	55046896	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	X	55046896	55046896	C	T	SNP	ALAS2	NM_000032.4	human	genbank	58_37c	-1	reviewed	missense	c.680	p.R227H	1.000	HMMPfam_Aminotran_1_2,superfamily_PLP-dependent transferases	PatternScan_AA_TRANSFER_CLASS_2,HMMPfam_Aminotran_1_2,HMMPfam_Preseq_ALAS,superfamily_PLP-dependent transferases	-	no_errors
ALDH8A1	64577	genome.wustl.edu	37	6	135263550	135263550	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	6	135263550	135263550	C	A	SNP	ALDH8A1	NM_022568.2	human	genbank	58_37c	-1	reviewed	missense	c.439	p.V147F	0.998	HMMPfam_Aldedh,superfamily_ALDH-like	HMMPfam_Aldedh,PatternScan_ALDEHYDE_DEHYDR_CYS,PatternScan_ALDEHYDE_DEHYDR_GLU,superfamily_ALDH-like	-	no_errors
ANGPT1	284	genome.wustl.edu	37	8	108509559	108509559	+	Silent	SNP	C	C	A	rs147086219	byCluster;byFrequency;by1000genomes	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	8	108509559	108509559	C	A	SNP	ANGPT1	NM_001146.3	human	genbank	58_37c	-1	reviewed	silent	c.228	p.P76	0.997	NULL	HMMPfam_Fibrinogen_C,HMMSmart_SM00186,PatternScan_FIBRIN_AG_C_DOMAIN,superfamily_Fibrinogen C-terminal domain-like	-	no_errors
ATCAY	85300	genome.wustl.edu	37	19	3905527	3905527	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	19	3905527	3905527	T	G	SNP	ATCAY	NM_033064.4	human	genbank	58_37c	+1	reviewed	missense	c.232	p.S78A	1.000	NULL	HMMSmart_SM00516,superfamily_CRAL/TRIO domain	-	no_errors
B9D1	27077	genome.wustl.edu	37	17	19246827	19246827	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	17	19246827	19246827	C	A	SNP	B9D1	ENST00000395616	human	ensembl	58_37c	-1	known	missense	c.509	p.W170L	0.000	NULL	HMMPfam_B9	-	no_errors
BZRAP1	9256	genome.wustl.edu	37	17	56395674	56395674	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	17	56395674	56395674	G	A	SNP	BZRAP1	NM_004758.2	human	genbank	58_37c	-1	validated	silent	c.1839	p.I613	0.940	NULL	HMMSmart_SM00326,superfamily_SH3-domain,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,HMMPfam_SH3_2	-	no_errors
C2orf44	80304	genome.wustl.edu	37	2	24261104	24261104	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	2	24261104	24261104	G	A	SNP	C2orf44	NM_025203.2	human	genbank	58_37c	-1	validated	nonsense	c.1261	p.Q421*	1.000	NULL	NULL	-	no_errors
C3orf71	646450	genome.wustl.edu	37	3	48956003	48956003	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	3	48956003	48956003	C	T	SNP	C3orf71	NM_001123040.1	human	genbank	58_37c	-1	predicted	missense	c.580	p.D194N	0.000	NULL	NULL	-	no_errors
C6orf221	154288	genome.wustl.edu	37	6	74072594	74072594	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	6	74072594	74072594	G	A	SNP	C6orf221	NM_001017361.2	human	genbank	58_37c	+1	validated	missense	c.142	p.E48K	0.528	NULL	NULL	-	no_errors
CACNA1G	8913	genome.wustl.edu	37	17	48695611	48695611	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	17	48695611	48695611	C	T	SNP	CACNA1G	ENST00000506406	human	ensembl	58_37c	+1	known	missense	c.5285	p.A1762V	1.000	NULL	HMMPfam_Ion_trans,superfamily_SSF81324	-	no_errors
CASKIN2	57513	genome.wustl.edu	37	17	73499334	73499334	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	17	73499334	73499334	C	T	SNP	CASKIN2	NM_020753.3	human	genbank	58_37c	-1	validated	silent	c.1821	p.G607	0.961	HMMPfam_SAM_1,HMMSmart_SM00454,superfamily_SAM/Pointed domain	HMMSmart_SM00326,superfamily_SH3-domain,HMMPfam_SAM_1,HMMSmart_SM00454,HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat,superfamily_SAM/Pointed domain,HMMPfam_SH3_2	-	no_errors
CCDC88A	55704	genome.wustl.edu	37	2	55563838	55563839	+	Frame_Shift_Del	DEL	CA	CA	-	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	CA	CA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	2	55563838	55563839	CA	-	DEL	CCDC88A	NM_001135597.1	human	genbank	58_37c	-1	validated	frame_shift_del	c.1635_1634	p.L545fs	0.982:1.000	NULL	superfamily_Prefoldin	-	no_errors
CDK12	0	genome.wustl.edu	37	17	37618634	37618634	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	17	37618634	37618634	C	A	SNP	CDK12	NM_016507.2	human	genbank	58_37c	+1	validated	silent	c.310	p.R104	0.876	NULL	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
CNOT1	23019	genome.wustl.edu	37	16	58617082	58617082	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	16	58617082	58617082	C	G	SNP	CNOT1	NM_016284.3	human	genbank	58_37c	-1	validated	missense	c.811	p.E271Q	1.000	NULL	HMMPfam_Not1,PatternScan_LECTIN_LEGUME_BETA	-	no_errors
COL6A3	1293	genome.wustl.edu	37	2	238275816	238275816	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	2	238275816	238275816	C	G	SNP	COL6A3	NM_004369.3	human	genbank	58_37c	-1	reviewed	missense	c.5014	p.D1672H	0.019	HMMPfam_VWA,HMMSmart_SM00327,superfamily_vWA-like	HMMPfam_VWA,HMMSmart_SM00327,HMMPfam_Kunitz_BPTI,HMMSmart_SM00131,PatternScan_BPTI_KUNITZ_1,superfamily_BPTI-like,HMMPfam_Collagen,superfamily_Fibronectin type III,superfamily_vWA-like	-	no_errors
CR2	1380	genome.wustl.edu	37	1	207651345	207651345	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	1	207651345	207651345	G	A	SNP	CR2	NM_001006658.2	human	genbank	58_37c	+1	reviewed	silent	c.3018	p.L1006	0.971	HMMPfam_Sushi,HMMSmart_CCP,superfamily_Complement_control_module	HMMPfam_Sushi,HMMSmart_CCP,superfamily_Complement_control_module	-	no_errors
DGKI	9162	genome.wustl.edu	37	7	137270022	137270022	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	7	137270022	137270022	C	T	SNP	DGKI	NM_004717.2	human	genbank	58_37c	-1	reviewed	missense	c.1496	p.R499H	1.000	HMMPfam_DAGK_cat,HMMSmart_DAGKc	HMMPfam_DAGK_acc,HMMSmart_DAGKa,HMMPfam_DAGK_cat,HMMSmart_DAGKc,HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK,HMMPfam_C1_1,HMMSmart_C1,PatternScan_ZF_DAG_PE_1	-	no_errors
DHRS11	79154	genome.wustl.edu	37	17	34956183	34956183	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	17	34956183	34956183	G	A	SNP	DHRS11	NM_024308.3	human	genbank	58_37c	+1	validated	silent	c.666	p.E222	0.886	superfamily_NAD(P)-binding Rossmann-fold domains	HMMPfam_adh_short,PatternScan_ADH_SHORT,superfamily_NAD(P)-binding Rossmann-fold domains	-	no_errors
DHRS4L2	317749	genome.wustl.edu	37	14	24470124	24470124	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	14	24470124	24470124	C	T	SNP	DHRS4L2	NM_198083.2	human	genbank	58_37c	+1	validated	missense	c.461	p.P154L	1.000	HMMPfam_adh_short,superfamily_NAD(P)-binding Rossmann-fold domains	HMMPfam_adh_short,PatternScan_ADH_SHORT,superfamily_NAD(P)-binding Rossmann-fold domains	-	no_errors
DHX30	22907	genome.wustl.edu	37	3	47890693	47890693	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	3	47890693	47890693	C	T	SNP	DHX30	NM_138615.2	human	genbank	58_37c	+1	reviewed	nonsense	c.2941	p.Q981*	1.000	HMMPfam_DUF1605	HMMPfam_Helicase_C,HMMSmart_SM00490,PatternScan_DEAH_ATP_HELICASE,HMMPfam_HA2,HMMPfam_DUF1605,HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases,superfamily_dsRNA-binding domain-like	-	no_errors
EGFL6	25975	genome.wustl.edu	37	X	13618176	13618176	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	X	13618176	13618176	C	T	SNP	EGFL6	NM_015507.3	human	genbank	58_37c	+1	reviewed	silent	c.363	p.L121	1.000	HMMSmart_SM00179,HMMSmart_SM00181,superfamily_Growth factor receptor domain,HMMPfam_EGF_CA	PatternScan_ASX_HYDROXYL,HMMPfam_MAM,HMMSmart_SM00137,HMMSmart_SM00179,HMMSmart_SM00181,superfamily_Growth factor receptor domain,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF_CA,HMMPfam_EGF_2,PatternScan_EGF_CA,superfamily_EGF/Laminin	-	no_errors
ENSG00000187900	0	genome.wustl.edu	37	3	97958040	97958040	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	3	97958040	97958040	T	A	SNP	OR5H7P	ENST00000341450	human	ensembl	58_37c	+1	known	3_prime_untranslated_region	c.*97958040	NULL	0.961	-	-	-	no_coding_region:pseudogene
ENSG00000203355	0	genome.wustl.edu	37	8	134080159	134080159	+	RNA	DEL	G	G	-	rs35515477	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	8	134080159	134080159	G	-	DEL	TG	NM_003235.4	human	genbank	58_37c	+1	reviewed	intronic	c.7240-27129	e42-27129	0.003	-	-	-	no_errors
ERBB3	2065	genome.wustl.edu	37	12	56495592	56495592	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	12	56495592	56495592	A	C	SNP	ERBB3	NM_001982.2	human	genbank	58_37c	+1	reviewed	missense	c.3782	p.E1261A	1.000	NULL	HMMPfam_Recep_L_domain,HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Furin-like,HMMSmart_SM00261,superfamily_Growth factor receptor domain,superfamily_Protein kinase-like (PK-like),superfamily_L domain-like	-	no_errors
FAT1	2195	genome.wustl.edu	37	4	187532774	187532774	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	4	187532774	187532774	G	C	SNP	FAT1	NM_005245.3	human	genbank	58_37c	-1	reviewed	missense	c.9619	p.P3207A	1.000	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Concanavalin A-like lectins/glucanases,superfamily_Cadherin-like	PatternScan_ASX_HYDROXYL,HMMSmart_SM00282,HMMSmart_SM00179,HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_EGF,HMMSmart_SM00181,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_2,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_Cadherin-like,PatternScan_EGF_CA,superfamily_EGF/Laminin	-	no_errors
FGD3	89846	genome.wustl.edu	37	9	95765284	95765284	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	9	95765284	95765284	C	A	SNP	FGD3	NM_001083536.1	human	genbank	58_37c	+1	validated	missense	c.531	p.H177Q	1.000	HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_DBL homology domain (DH-domain)	HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_DBL homology domain (DH-domain),HMMPfam_FYVE,HMMSmart_SM00064,HMMPfam_PH,HMMSmart_SM00233,superfamily_FYVE/PHD zinc finger,superfamily_PH domain-like	-	no_errors
FN1	2335	genome.wustl.edu	37	2	216271160	216271160	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	2	216271160	216271160	C	T	SNP	FN1	NM_212482.1	human	genbank	58_37c	-1	reviewed	silent	c.2787	p.P929	0.902	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III	HMMPfam_fn1,HMMSmart_SM00058,PatternScan_FN1_1,HMMPfam_fn2,HMMSmart_SM00059,PatternScan_FN2_1,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,PatternScan_EGF_1,superfamily_Kringle-like,PatternScan_ALDEHYDE_DEHYDR_GLU,superfamily_Fibronectin type I module	-	no_errors
FOXN1	8456	genome.wustl.edu	37	17	26861358	26861358	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	17	26861358	26861358	G	A	SNP	FOXN1	NM_003593.2	human	genbank	58_37c	+1	reviewed	missense	c.937	p.D313N	1.000	"HMMPfam_Fork_head,HMMSmart_SM00339,superfamily_""Winged helix"" DNA-binding domain"	"HMMPfam_Fork_head,HMMSmart_SM00339,PatternScan_FORK_HEAD_2,superfamily_""Winged helix"" DNA-binding domain"	-	no_errors
GBP6	163351	genome.wustl.edu	37	1	89850894	89850894	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	1	89850894	89850894	A	G	SNP	GBP6	NM_198460.2	human	genbank	58_37c	+1	validated	missense	c.1768	p.T590A	0.000	NULL	HMMPfam_GBP_C,HMMPfam_GBP,superfamily_Interferon-induced guanylate-binding protein 1 (GBP1) C-terminal domain,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
GCNT3	9245	genome.wustl.edu	37	15	59910998	59910998	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	15	59910998	59910998	C	T	SNP	GCNT3	NM_004751.2	human	genbank	58_37c	+1	reviewed	silent	c.561	p.F187	0.294	HMMPfam_Branch	HMMPfam_Branch	-	no_errors
GEFT	115557	genome.wustl.edu	37	12	58009443	58009443	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	12	58009443	58009443	G	A	SNP	GEFT	NM_001111270.1	human	genbank	58_37c	+1	validated	missense	c.1304	p.G435E	1.000	superfamily_PH domain-like	HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_DBL homology domain (DH-domain),superfamily_PH domain-like	-	no_errors
GEFT	115557	genome.wustl.edu	37	12	58010139	58010139	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	12	58010139	58010139	G	C	SNP	GEFT	NM_001111270.1	human	genbank	58_37c	+1	validated	missense	c.1610	p.G537A	0.059	NULL	HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_DBL homology domain (DH-domain),superfamily_PH domain-like	-	no_errors
GNRH2	2797	genome.wustl.edu	37	20	3026345	3026346	+	Frame_Shift_Ins	INS	-	-	GCCCC	rs16996832	byCluster;by1000genomes	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	20	3026345	3026346	-	GCCCC	INS	GNRH2	NM_001501.1	human	genbank	58_37c	+1	reviewed	frame_shift_ins	c.326_327	p.P113fs	0.010:0.024	NULL	HMMPfam_GnRH,PatternScan_GNRH	-	no_errors
GOLGA6L3	0	genome.wustl.edu	37	15	83014132	83014132	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	15	83014132	83014132	C	G	SNP	ENSG00000230135	ENST00000449790	human	ensembl	58_37c	-1	known	missense	c.451	p.E151Q	0.991	NULL	NULL	-	no_errors
GPC6	10082	genome.wustl.edu	37	13	94197641	94197641	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	13	94197641	94197641	A	G	SNP	GPC6	NM_005708.3	human	genbank	58_37c	+1	reviewed	missense	c.286	p.T96A	0.997	HMMPfam_Glypican	HMMPfam_Glypican,PatternScan_GLYPICAN	-	no_errors
H2AFY	9555	genome.wustl.edu	37	5	134705192	134705192	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	5	134705192	134705192	G	A	SNP	H2AFY	NM_138610.2	human	genbank	58_37c	-1	reviewed	silent	c.381	p.I127	1.000	NULL	HMMSmart_SM00414,HMMPfam_Macro,HMMSmart_SM00506,HMMPfam_Histone,superfamily_Histone-fold,superfamily_Macro domain-like	-	no_errors
HMCN1	83872	genome.wustl.edu	37	1	185946924	185946924	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	1	185946924	185946924	C	T	SNP	HMCN1	NM_031935.2	human	genbank	58_37c	+1	reviewed	missense	c.2377	p.P793S	1.000	HMMPfam_I-set,superfamily_Immunoglobulin	PatternScan_ASX_HYDROXYL,PatternScan_CECROPIN,HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat,HMMSmart_SM00179,HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_EGF,HMMSmart_SM00181,HMMPfam_G2F,HMMSmart_SM00682,superfamily_GFP-like,PatternScan_EGF_2,HMMPfam_EGF_CA,HMMPfam_I-set,HMMPfam_ig,PatternScan_EGF_CA,superfamily_Immunoglobulin,superfamily_vWA-like,superfamily_EGF/Laminin	-	no_errors
IKBKE	9641	genome.wustl.edu	37	1	206658371	206658371	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	1	206658371	206658371	C	T	SNP	IKBKE	NM_014002.2	human	genbank	58_37c	+1	validated	silent	c.1465	p.L489	0.114	NULL	PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
KRTCAP2	200185	genome.wustl.edu	37	1	155145340	155145340	+	Silent	SNP	G	G	C	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	1	155145340	155145340	G	C	SNP	KRTCAP2	NM_173852.3	human	genbank	58_37c	-1	validated	silent	c.111	p.L37	0.469	HMMPfam_Keratin_assoc	HMMPfam_Keratin_assoc	-	no_errors
LHX9	56956	genome.wustl.edu	37	1	197889297	197889297	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	1	197889297	197889297	T	C	SNP	LHX9	NM_020204.2	human	genbank	58_37c	+1	reviewed	missense	c.370	p.Y124H	1.000	HMMPfam_LIM,superfamily_Glucocorticoid receptor-like (DNA-binding domain)	HMMPfam_Homeobox,HMMSmart_SM00389,HMMPfam_LIM,HMMSmart_SM00132,PatternScan_LIM_DOMAIN_1,superfamily_Homeodomain-like,PatternScan_HOMEOBOX_1,superfamily_Glucocorticoid receptor-like (DNA-binding domain)	-	no_errors
LMTK2	22853	genome.wustl.edu	37	7	97821026	97821026	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	7	97821026	97821026	G	A	SNP	LMTK2	NM_014916.3	human	genbank	58_37c	+1	reviewed	missense	c.1249	p.D417N	1.000	superfamily_Protein kinase-like (PK-like)	HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_TYR,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP	-	no_errors
LOC100288921	0	genome.wustl.edu	37	1	17197929	17197929	+	Missense_Mutation	SNP	G	G	A	rs2779471	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	1	17197929	17197929	G	A	SNP	LOC100288921	XM_002342042.1	human	genbank	58_37c	-1	model	missense	c.100	p.R34C	0.838	NULL	NULL	-	no_errors
LOC100289043	0	genome.wustl.edu	37	11	6411966	6411966	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	11	6411966	6411966	G	T	SNP	LOC100289043	XM_002343048.1	human	genbank	58_37c	-1	model	missense	c.70	p.R24S	0.007	NULL	NULL	-	no_errors
MAGI3	260425	genome.wustl.edu	37	1	114226131	114226131	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	1	114226131	114226131	G	A	SNP	MAGI3	NM_001142782.1	human	genbank	58_37c	+1	validated	missense	c.3941	p.R1314Q	0.002	PatternScan_GLY_RADICAL_1	HMMPfam_WW,HMMSmart_WW,PatternScan_WW_DOMAIN_1,superfamily_WW_Rsp5_WWP,HMMPfam_PDZ,HMMSmart_PDZ,superfamily_PDZ,HMMPfam_Guanylate_kin,HMMSmart_GuKc,PatternScan_GLY_RADICAL_1,PatternScan_GUANYLATE_KINASE_1,superfamily_SSF52540	-	no_errors
MC4R	4160	genome.wustl.edu	37	18	58038781	58038781	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	18	58038781	58038781	A	C	SNP	MC4R	NM_005912.2	human	genbank	58_37c	-1	reviewed	missense	c.802	p.Y268D	1.000	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
MED13L	23389	genome.wustl.edu	37	12	116457650	116457653	+	Frame_Shift_Del	DEL	TTCT	TTCT	-	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	TTCT	TTCT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	12	116457650	116457653	TTCT	-	DEL	MED13L	NM_015335.3	human	genbank	58_37c	-1	validated	frame_shift_del	c.753_750	p.E251fs	0.358:0.998:1.000:0.998	NULL	HMMPfam_TRAP_240kDa	-	no_errors
MGMT	4255	genome.wustl.edu	37	10	131506231	131506231	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	10	131506231	131506231	G	A	SNP	MGMT	NM_002412.3	human	genbank	58_37c	+1	validated	silent	c.291	p.L97	0.946	HMMPfam_Methyltransf_1N,superfamily_SSF53155	PatternScan_THIOL_PROTEASE_HIS,PatternScan_MGMT,HMMPfam_Methyltransf_1N,HMMPfam_DNA_binding_1,superfamily_MethylDNA_cys_mtrans_DNA_bd,superfamily_SSF53155	-	no_errors
N4BP2	55728	genome.wustl.edu	37	4	40104561	40104561	+	Missense_Mutation	SNP	A	A	G	rs146219712	by1000genomes	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	4	40104561	40104561	A	G	SNP	N4BP2	NM_018177.3	human	genbank	58_37c	+1	reviewed	missense	c.1096	p.M366V	0.873	NULL	HMMPfam_Smr,HMMSmart_SM00463,superfamily_UBA-like,HMMPfam_DUF1771,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
NPR3	4883	genome.wustl.edu	37	5	32712623	32712623	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	5	32712623	32712623	C	G	SNP	NPR3	NM_000908.2	human	genbank	58_37c	+1	validated	missense	c.741	p.I247M	1.000	HMMPfam_ANF_receptor,superfamily_Periplasmic binding protein-like I	PatternScan_ANF_RECEPTORS,HMMPfam_ANF_receptor,superfamily_Periplasmic binding protein-like I	-	no_errors
OPCML	4978	genome.wustl.edu	37	11	133402219	133402219	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	11	133402219	133402219	T	C	SNP	OPCML	NM_001012393.1	human	genbank	58_37c	-1	reviewed	missense	c.1	p.M1V	1.000	NULL	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,HMMPfam_V-set,HMMPfam_ig,superfamily_Immunoglobulin	-	no_errors
OR10G7	390265	genome.wustl.edu	37	11	123909455	123909455	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	11	123909455	123909455	G	C	SNP	OR10G7	NM_001004463.1	human	genbank	58_37c	-1	provisional	missense	c.254	p.S85C	0.001	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
OR8K1	390157	genome.wustl.edu	37	11	56114084	56114084	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	11	56114084	56114084	G	A	SNP	OR8K1	NM_001002907.1	human	genbank	58_37c	+1	provisional	silent	c.570	p.L190	0.004	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
OXNAD1	92106	genome.wustl.edu	37	3	16343316	16343316	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	3	16343316	16343316	G	A	SNP	OXNAD1	NM_138381.2	human	genbank	58_37c	+1	validated	missense	c.616	p.E206K	0.002	HMMPfam_NAD_binding_1,superfamily_SSF52343	HMMPfam_NAD_binding_1,superfamily_Riboflavin_synthase_like_b-brl,superfamily_SSF52343	-	no_errors
PGBD5	79605	genome.wustl.edu	37	1	230492905	230492905	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	1	230492905	230492905	G	A	SNP	PGBD5	NM_024554.3	human	genbank	58_37c	-1	reviewed	missense	c.584	p.T195M	0.046	NULL	NULL	-	no_errors
PLCL1	5334	genome.wustl.edu	37	2	198948973	198948973	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	2	198948973	198948973	G	A	SNP	PLCL1	NM_006226.3	human	genbank	58_37c	+1	validated	silent	c.438	p.L146	0.996	NULL	HMMPfam_C2,HMMSmart_C2,HMMPfam_PI-PLC-X,HMMSmart_PLCXc,HMMPfam_PI-PLC-Y,HMMSmart_PLCYc,HMMPfam_PH,HMMSmart_PH,superfamily_C2_CaLB,HMMPfam_efhand_like,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_SSF47473,superfamily_SSF50729	-	no_errors
PPDPF	79144	genome.wustl.edu	37	20	62152893	62152893	+	Silent	SNP	C	T	T	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	20	62152893	62152893	C	T	SNP	PPDPF	NM_024299.2	human	genbank	58_37c	+1	provisional	silent	c.84	p.S28	1.000	NULL	NULL	-	no_errors
PSMD3	5709	genome.wustl.edu	37	17	38140650	38140650	+	Silent	SNP	C	C	G	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	17	38140650	38140650	C	G	SNP	PSMD3	NM_002809.2	human	genbank	58_37c	+1	reviewed	silent	c.324	p.L108	1.000	superfamily_TPR-like	"HMMPfam_PCI,HMMSmart_SM00088,HMMSmart_SM00753,HMMPfam_Rpn3_C,superfamily_""Winged helix"" DNA-binding domain,superfamily_TPR-like"	-	no_errors
PTPRT	11122	genome.wustl.edu	37	20	41420103	41420103	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	20	41420103	41420103	G	C	SNP	PTPRT	NM_133170.3	human	genbank	58_37c	-1	reviewed	missense	c.218	p.S73C	1.000	HMMPfam_MAM,HMMSmart_SM00137,PatternScan_MAM_1	HMMPfam_Y_phosphatase,HMMSmart_SM00194,HMMPfam_MAM,HMMSmart_SM00137,PatternScan_MAM_1,HMMSmart_SM00404,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,PatternScan_TYR_PHOSPHATASE_1,superfamily_Immunoglobulin,superfamily_(Phosphotyrosine protein) phosphatases II	-	no_errors
RAPGEF1	2889	genome.wustl.edu	37	9	134501378	134501378	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	9	134501378	134501378	A	C	SNP	RAPGEF1	NM_198679.1	human	genbank	58_37c	-1	reviewed	missense	c.1636	p.F546V	1.000	NULL	HMMPfam_RasGEF_N,HMMSmart_RasGEFN,HMMPfam_RasGEF,HMMSmart_RasGEF,superfamily_Ras_GEF,PatternScan_RASGEF	-	no_errors
RBBP6	5930	genome.wustl.edu	37	16	24567161	24567161	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	16	24567161	24567161	G	C	SNP	RBBP6	NM_006910.4	human	genbank	58_37c	+1	reviewed	missense	c.457	p.G153R	1.000	superfamily_Retrovirus zinc finger-like domains	HMMSmart_SM00184,HMMPfam_zf-CCHC,HMMSmart_SM00343,HMMPfam_U-box,HMMPfam_DWNN,superfamily_Retrovirus zinc finger-like domains,superfamily_RING/U-box	-	no_errors
RFX7	64864	genome.wustl.edu	37	15	56386801	56386801	+	Nonsense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	15	56386801	56386801	G	C	SNP	RFX7	NM_022841.5	human	genbank	58_37c	-1	validated	nonsense	c.3125	p.S1042*	1.000	NULL	"HMMPfam_RFX_DNA_binding,superfamily_""Winged helix"" DNA-binding domain"	-	no_errors
RPL13AP3	0	genome.wustl.edu	37	14	56233310	56233310	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	14	56233310	56233310	C	G	SNP	RPL13AP3	NR_004844.1	human	genbank	58_37c	+1	provisional	rna	NULL	NULL	1.000	-	-	-	pseudogene
RYR2	6262	genome.wustl.edu	37	1	237870517	237870517	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	1	237870517	237870517	C	A	SNP	RYR2	NM_001035.2	human	genbank	58_37c	+1	reviewed	silent	c.9849	p.I3283	1.000	NULL	HMMPfam_RYDR_ITPR,HMMPfam_RyR,HMMPfam_MIR,superfamily_MIR domain (Pfam 02815),HMMPfam_SPRY,HMMPfam_Ion_trans,HMMPfam_RR_TM4-6,HMMPfam_RIH_assoc,HMMPfam_Ins145_P3_rec,HMMSmart_SM00472,HMMSmart_SM00449,superfamily_EF-hand	-	no_errors
RYR2	6262	genome.wustl.edu	37	1	237924301	237924301	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	1	237924301	237924301	C	T	SNP	RYR2	NM_001035.2	human	genbank	58_37c	+1	reviewed	missense	c.11449	p.L3817F	1.000	NULL	HMMPfam_RYDR_ITPR,HMMPfam_RyR,HMMPfam_MIR,superfamily_MIR domain (Pfam 02815),HMMPfam_SPRY,HMMPfam_Ion_trans,HMMPfam_RR_TM4-6,HMMPfam_RIH_assoc,HMMPfam_Ins145_P3_rec,HMMSmart_SM00472,HMMSmart_SM00449,superfamily_EF-hand	-	no_errors
SEC23A	10484	genome.wustl.edu	37	14	39532596	39532596	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	14	39532596	39532596	A	T	SNP	SEC23A	NM_006364.2	human	genbank	58_37c	-1	reviewed	missense	c.1330	p.C444S	0.937	HMMPfam_Sec23_BS,superfamily_SSF81995	HMMPfam_zf-Sec23_Sec24,superfamily_Znf_Sec23_Sec24,HMMPfam_Sec23_trunk,HMMPfam_Sec23_helical,superfamily_Sec23_helical,HMMPfam_Gelsolin,HMMPfam_Sec23_BS,superfamily_SSF53300,superfamily_SSF81995,superfamily_SSF82754	-	no_errors
SERPINC1	462	genome.wustl.edu	37	1	173881074	173881075	+	Frame_Shift_Del	DEL	AG	AG	-	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	AG	AG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	1	173881074	173881075	AG	-	DEL	SERPINC1	NM_000488.3	human	genbank	58_37c	-1	reviewed	frame_shift_del	c.487_486	p.Y163fs	1.000:1.000	HMMPfam_Serpin,HMMSmart_SERPIN,superfamily_Prot_inh_serpin	HMMPfam_Serpin,HMMSmart_SERPIN,PatternScan_SERPIN,superfamily_Prot_inh_serpin	-	no_errors
SLC15A4	121260	genome.wustl.edu	37	12	129293488	129293489	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	12	129293488	129293489	-	A	INS	SLC15A4	NM_145648.3	human	genbank	58_37c	-1	validated	frame_shift_ins	c.1103_1102	p.W368fs	1.000:1.000	HMMPfam_PTR2,superfamily_MFS general substrate transporter	HMMPfam_PTR2,PatternScan_MULTICOPPER_OXIDASE1,superfamily_MFS general substrate transporter,PatternScan_PTR2_2	-	no_errors
SLC6A17	388662	genome.wustl.edu	37	1	110738234	110738234	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	1	110738234	110738234	G	A	SNP	SLC6A17	NM_001010898.2	human	genbank	58_37c	+1	validated	missense	c.1519	p.V507M	0.952	HMMPfam_SNF	HMMPfam_SNF,PatternScan_NA_NEUROTRAN_SYMP_1,PatternScan_NA_NEUROTRAN_SYMP_2	-	no_errors
ST18	9705	genome.wustl.edu	37	8	53084705	53084705	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	8	53084705	53084705	T	G	SNP	ST18	NM_014682.2	human	genbank	58_37c	-1	validated	missense	c.716	p.E239A	0.997	NULL	HMMPfam_zf-C2HC,HMMPfam_MYT1,superfamily_SSF103637	-	no_errors
STAM	8027	genome.wustl.edu	37	10	17702520	17702520	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	10	17702520	17702520	G	A	SNP	STAM	NM_003473.2	human	genbank	58_37c	+1	reviewed	missense	c.98	p.C33Y	1.000	HMMPfam_VHS,superfamily_ENTH/VHS domain,HMMSmart_SM00288	HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain,HMMPfam_VHS,HMMPfam_UIM,superfamily_ENTH/VHS domain,HMMSmart_SM00288	-	no_errors
SYAP1	94056	genome.wustl.edu	37	X	16775411	16775411	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	X	16775411	16775411	G	C	SNP	SYAP1	NM_032796.3	human	genbank	58_37c	+1	validated	missense	c.910	p.E304Q	0.547	NULL	HMMPfam_BSD,HMMSmart_SM00751	-	no_errors
TBC1D22A	25771	genome.wustl.edu	37	22	47393596	47393596	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	22	47393596	47393596	C	T	SNP	TBC1D22A	NM_014346.1	human	genbank	58_37c	+1	provisional	missense	c.1192	p.R398W	1.000	HMMPfam_TBC,HMMSmart_SM00164,superfamily_Ypt/Rab-GAP domain of gyp1p	HMMPfam_TBC,HMMSmart_SM00164,superfamily_Ypt/Rab-GAP domain of gyp1p,PatternScan_AA_TRNA_LIGASE_I	-	no_errors
TDRD6	221400	genome.wustl.edu	37	6	46657944	46657944	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	6	46657944	46657944	G	A	SNP	TDRD6	NM_001010870.2	human	genbank	58_37c	+1	validated	silent	c.2079	p.T693	0.000	NULL	HMMSmart_TUDOR,HMMPfam_TUDOR,superfamily_SSF63748	-	no_errors
TMEM163	81615	genome.wustl.edu	37	2	135470791	135470791	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	2	135470791	135470791	C	G	SNP	TMEM163	NM_030923.4	human	genbank	58_37c	-1	validated	missense	c.301	p.A101P	1.000	NULL	NULL	-	no_errors
TNPO1	3842	genome.wustl.edu	37	5	72144299	72144299	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	5	72144299	72144299	A	-	DEL	TNPO1	NM_002270.3	human	genbank	58_37c	+1	reviewed	frame_shift_del	c.103	p.T35fs	1.000	superfamily_ARM repeat	HMMPfam_HEAT,HMMPfam_IBN_N,superfamily_ARM repeat	-	no_errors
TOMM22	56993	genome.wustl.edu	37	22	39079782	39079782	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	22	39079782	39079782	G	A	SNP	TOMM22	NM_020243.4	human	genbank	58_37c	+1	reviewed	missense	c.365	p.G122E	1.000	HMMPfam_IMS-faced	HMMPfam_IMS-faced	-	no_errors
TP53	7157	genome.wustl.edu	37	17	7577526	7577526	+	Missense_Mutation	SNP	A	A	G	rs121912653	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	17	7577526	7577526	A	G	SNP	TP53	NM_000546.4	human	genbank	58_37c	-1	reviewed	missense	c.755	p.L252P	1.000	superfamily_p53-like transcription factors,HMMPfam_P53	PatternScan_P53,superfamily_p53-like transcription factors,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain,HMMPfam_P53,HMMPfam_P53_TAD	-	no_errors
TRIM55	84675	genome.wustl.edu	37	8	67064633	67064633	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	8	67064633	67064633	A	C	SNP	TRIM55	NM_184085.1	human	genbank	58_37c	+1	reviewed	missense	c.1007	p.E336A	0.937	NULL	HMMPfam_zf-B_box,HMMSmart_SM00336,HMMSmart_SM00184,PatternScan_ZF_RING_1,HMMPfam_zf-C3HC4,superfamily_RING/U-box	-	no_errors
TTLL11	158135	genome.wustl.edu	37	9	124751816	124751816	+	Silent	SNP	G	G	C	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	9	124751816	124751816	G	C	SNP	TTLL11	NM_001139442.1	human	genbank	58_37c	-1	validated	silent	c.1197	p.P399	0.998	HMMPfam_TTL,superfamily_Glutathione synthetase ATP-binding domain-like	HMMPfam_TTL,superfamily_Glutathione synthetase ATP-binding domain-like	-	no_errors
USP19	10869	genome.wustl.edu	37	3	49148221	49148221	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	3	49148221	49148221	G	T	SNP	USP19	NM_006677.1	human	genbank	58_37c	-1	provisional	silent	c.3312	p.I1104	0.679	HMMPfam_UCH,superfamily_Cysteine proteinases	HMMPfam_UCH,HMMPfam_zf-MYND,PatternScan_ZF_MYND_1,superfamily_HSP20-like chaperones,HMMPfam_DUF1872,HMMPfam_CS,PatternScan_UCH_2_1,PatternScan_UCH_2_2,superfamily_Cysteine proteinases	-	no_errors
USP21	27005	genome.wustl.edu	37	1	161133349	161133349	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	1	161133349	161133349	G	T	SNP	USP21	NM_001014443.2	human	genbank	58_37c	+1	reviewed	missense	c.1054	p.D352Y	1.000	HMMPfam_UCH,superfamily_Cysteine proteinases	HMMPfam_UCH,PatternScan_UCH_2_1,PatternScan_UCH_2_2,superfamily_Cysteine proteinases	-	no_errors
USP54	159195	genome.wustl.edu	37	10	75258501	75258501	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	10	75258501	75258501	A	G	SNP	USP54	NM_152586.3	human	genbank	58_37c	-1	provisional	silent	c.4941	p.Y1647	0.894	NULL	HMMPfam_UCH,superfamily_Cysteine proteinases	-	no_errors
WDR26	80232	genome.wustl.edu	37	1	224592164	224592164	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	1	224592164	224592164	C	G	SNP	WDR26	NM_025160.6	human	genbank	58_37c	-1	reviewed	missense	c.826	p.D276H	1.000	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40	HMMSmart_SM00320,HMMSmart_SM00668,superfamily_WD40 repeat-like,HMMPfam_WD40	-	no_errors
ZBTB41	360023	genome.wustl.edu	37	1	197169214	197169214	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	1	197169214	197169214	G	A	SNP	ZBTB41	NM_194314.2	human	genbank	58_37c	-1	validated	silent	c.390	p.H130	0.991	HMMSmart_SM00225,superfamily_POZ domain,HMMPfam_BTB	HMMSmart_SM00225,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,superfamily_POZ domain,HMMPfam_BTB,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZKSCAN4	387032	genome.wustl.edu	37	6	28213028	28213028	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	6	28213028	28213028	G	C	SNP	ZKSCAN4	NM_019110.3	human	genbank	58_37c	-1	provisional	missense	c.1504	p.L502V	0.355	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box,HMMPfam_SCAN,HMMSmart_SCAN,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
ZNF844	284391	genome.wustl.edu	37	19	12187501	12187501	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AN-A0FV-01A-11W-A019-09	TCGA-AN-A0FV-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c70259c1-f561-43d7-9829-6852815baa87	6cbd9cc2-e405-49d5-b512-cae7c4460f19	19	12187501	12187501	G	C	SNP	ZNF844	NM_001136501.1	human	genbank	58_37c	+1	provisional	missense	c.1566	p.M522I	0.023	NULL	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
