Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
AGAP11	119385	genome.wustl.edu	37	10	88769294	88769294	+	Missense_Mutation	SNP	C	C	T	rs190063080	by1000genomes	TCGA-BH-A0E1-01A-11W-A071-09	TCGA-BH-A0E1-10A-01W-A071-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48706085-54be-4ea7-922e-46757a0b2979	e1bc14b6-02fc-4f82-89c6-c08d7482449f	10	88769294	88769294	C	T	SNP	AGAP11	NM_133447.1	human	genbank	58_37c	+1	validated	missense	c.1285	p.R429W	1.000	HMMPfam_ArfGap,HMMSmart_ArfGap,superfamily_ArfGAP,superfamily_ANK	HMMPfam_ArfGap,HMMSmart_ArfGap,superfamily_ArfGAP,HMMPfam_PH,HMMSmart_PH,HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK,superfamily_SSF50729	-	no_errors
ALK	238	genome.wustl.edu	37	2	29917810	29917810	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0E1-01A-11W-A071-09	TCGA-BH-A0E1-10A-01W-A071-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48706085-54be-4ea7-922e-46757a0b2979	e1bc14b6-02fc-4f82-89c6-c08d7482449f	2	29917810	29917810	C	T	SNP	ALK	NM_004304.3	human	genbank	58_37c	-1	reviewed	silent	c.858	p.Q286	1.000	NULL	HMMPfam_MAM,HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,PatternScan_RECEPTOR_TYR_KIN_II,HMMSmart_SM00192,superfamily_LDL receptor-like module,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_TYR,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP	-	no_errors
APOB	338	genome.wustl.edu	37	2	21236250	21236250	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0E1-01A-11W-A071-09	TCGA-BH-A0E1-10A-01W-A071-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48706085-54be-4ea7-922e-46757a0b2979	e1bc14b6-02fc-4f82-89c6-c08d7482449f	2	21236250	21236250	C	T	SNP	APOB	NM_000384.2	human	genbank	58_37c	-1	reviewed	missense	c.3998	p.R1333Q	0.007	NULL	HMMPfam_Vitellogenin_N,HMMSmart_SM00638,HMMPfam_DUF1081,HMMPfam_DUF1943,superfamily_Lipovitellin-phosvitin complex beta-sheet shell regions,superfamily_Lipovitellin-phosvitin complex superhelical domain	-	no_errors
CHD4	1108	genome.wustl.edu	37	12	6702280	6702280	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0E1-01A-11W-A071-09	TCGA-BH-A0E1-10A-01W-A071-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48706085-54be-4ea7-922e-46757a0b2979	e1bc14b6-02fc-4f82-89c6-c08d7482449f	12	6702280	6702280	G	A	SNP	CHD4	NM_001273.2	human	genbank	58_37c	-1	reviewed	missense	c.2629	p.R877W	0.999	HMMPfam_SNF2_N,PatternScan_DEAH_ATP_HELICASE,HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_SNF2_N,HMMPfam_Chromo,HMMSmart_SM00298,PatternScan_CHROMO_1,HMMPfam_Helicase_C,HMMSmart_SM00490,HMMSmart_SM00249,PatternScan_DEAH_ATP_HELICASE,HMMPfam_DUF1086,HMMPfam_DUF1087,superfamily_FYVE/PHD zinc finger,HMMPfam_CHDCT2,HMMPfam_CHDNT,HMMSmart_SM00487,superfamily_Chromo domain-like,PatternScan_ZF_PHD_1,HMMPfam_PHD,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
DCAF8L2	347442	genome.wustl.edu	37	X	27765579	27765579	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0E1-01A-11W-A071-09	TCGA-BH-A0E1-10A-01W-A071-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48706085-54be-4ea7-922e-46757a0b2979	e1bc14b6-02fc-4f82-89c6-c08d7482449f	X	27765579	27765579	C	T	SNP	DCAF8L2	NM_001136533.1	human	genbank	58_37c	+1	provisional	silent	c.567	p.V189	0.007	superfamily_WD40 repeat-like	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40	-	no_errors
DDR2	4921	genome.wustl.edu	37	1	162731228	162731228	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0E1-01A-11W-A071-09	TCGA-BH-A0E1-10A-01W-A071-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48706085-54be-4ea7-922e-46757a0b2979	e1bc14b6-02fc-4f82-89c6-c08d7482449f	1	162731228	162731228	G	C	SNP	DDR2	NM_001014796.1	human	genbank	58_37c	+1	reviewed	missense	c.1083	p.E361D	1.000	NULL	HMMPfam_F5_F8_type_C,HMMSmart_FA58C,PatternScan_FA58C_1,PatternScan_FA58C_2,HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,PatternScan_RECEPTOR_TYR_KIN_II,PatternScan_PROTEIN_KINASE_TYR,superfamily_Gal_bind_like,superfamily_Kinase_like	-	no_errors
DDX49	54555	genome.wustl.edu	37	19	19031392	19031392	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0E1-01A-11W-A071-09	TCGA-BH-A0E1-10A-01W-A071-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48706085-54be-4ea7-922e-46757a0b2979	e1bc14b6-02fc-4f82-89c6-c08d7482449f	19	19031392	19031392	G	A	SNP	DDX49	NM_019070.4	human	genbank	58_37c	+1	validated	missense	c.119	p.R40Q	1.000	HMMPfam_DEAD,HMMSmart_DEXDc,superfamily_SSF52540	PatternScan_DEAD_ATP_HELICASE,HMMPfam_Helicase_C,HMMSmart_HELICc,HMMPfam_DEAD,HMMSmart_DEXDc,superfamily_SSF52540	-	no_errors
DGKG	1608	genome.wustl.edu	37	3	185985540	185985540	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0E1-01A-11W-A071-09	TCGA-BH-A0E1-10A-01W-A071-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48706085-54be-4ea7-922e-46757a0b2979	e1bc14b6-02fc-4f82-89c6-c08d7482449f	3	185985540	185985540	C	T	SNP	DGKG	NM_001346.2	human	genbank	58_37c	-1	reviewed	silent	c.1143	p.T381	0.005	HMMPfam_C1_1,HMMSmart_SM00109,PatternScan_ZF_DAG_PE_1,superfamily_Cysteine-rich domain	HMMPfam_DAGK_acc,HMMSmart_SM00045,HMMPfam_DAGK_cat,HMMSmart_SM00046,HMMSmart_SM00054,HMMPfam_C1_1,HMMSmart_SM00109,PatternScan_ZF_DAG_PE_1,PatternScan_EF_HAND_1,superfamily_EF-hand,superfamily_Cysteine-rich domain	-	no_errors
ESYT2	57488	genome.wustl.edu	37	7	158552764	158552764	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0E1-01A-11W-A071-09	TCGA-BH-A0E1-10A-01W-A071-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48706085-54be-4ea7-922e-46757a0b2979	e1bc14b6-02fc-4f82-89c6-c08d7482449f	7	158552764	158552764	C	T	SNP	ESYT2	NM_020728.2	human	genbank	58_37c	-1	validated	silent	c.1452	p.A484	0.000	superfamily_C2_CaLB	HMMPfam_C2,HMMSmart_C2,superfamily_C2_CaLB	-	no_errors
ISM2	145501	genome.wustl.edu	37	14	77948868	77948868	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-BH-A0E1-01A-11W-A071-09	TCGA-BH-A0E1-10A-01W-A071-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48706085-54be-4ea7-922e-46757a0b2979	e1bc14b6-02fc-4f82-89c6-c08d7482449f	14	77948868	77948868	T	C	SNP	ISM2	NM_199296.2	human	genbank	58_37c	-1	reviewed	missense	c.770	p.E257G	0.964	NULL	HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat,HMMPfam_AMOP,HMMSmart_SM00723	-	no_errors
ITGA11	22801	genome.wustl.edu	37	15	68631959	68631959	+	Silent	SNP	G	G	T	novel	unknown	TCGA-BH-A0E1-01A-11W-A071-09	TCGA-BH-A0E1-10A-01W-A071-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48706085-54be-4ea7-922e-46757a0b2979	e1bc14b6-02fc-4f82-89c6-c08d7482449f	15	68631959	68631959	G	T	SNP	ITGA11	NM_001004439.1	human	genbank	58_37c	-1	reviewed	silent	c.1155	p.V385	0.014	superfamily_Integrin alpha N-terminal domain	HMMPfam_VWA,HMMSmart_SM00327,HMMPfam_FG-GAP,HMMSmart_SM00191,HMMPfam_Integrin_alpha2,superfamily_vWA-like,superfamily_Integrin domains,superfamily_Integrin alpha N-terminal domain	-	no_errors
KRT71	112802	genome.wustl.edu	37	12	52940265	52940265	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0E1-01A-11W-A071-09	TCGA-BH-A0E1-10A-01W-A071-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48706085-54be-4ea7-922e-46757a0b2979	e1bc14b6-02fc-4f82-89c6-c08d7482449f	12	52940265	52940265	G	A	SNP	KRT71	NM_033448.2	human	genbank	58_37c	-1	reviewed	missense	c.1130	p.A377V	0.026	HMMPfam_Filament	HMMPfam_Filament,PatternScan_IF	-	no_errors
KRTAP5-4	387267	genome.wustl.edu	37	11	1643049	1643049	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-BH-A0E1-01A-11W-A071-09	TCGA-BH-A0E1-11A-13W-A100-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	48706085-54be-4ea7-922e-46757a0b2979	11397279-b38a-4ec6-b121-21fda5625386	11	1643049	1643049	A	C	SNP	KRTAP5-4	NM_001012709.1	human	genbank	58_37c	-1	provisional	missense	c.275	p.V92G	0.994	NULL	PatternScan_VWFC_1,PatternScan_TNFR_NGFR_1,PatternScan_MOLYBDOPTERIN_PROK_1	-	no_errors
MAPK3	5595	genome.wustl.edu	37	16	30129759	30129759	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0E1-01A-11W-A071-09	TCGA-BH-A0E1-10A-01W-A071-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48706085-54be-4ea7-922e-46757a0b2979	e1bc14b6-02fc-4f82-89c6-c08d7482449f	16	30129759	30129759	G	A	SNP	MAPK3	NM_002746.2	human	genbank	58_37c	-1	reviewed	missense	c.454	p.R152W	1.000	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_MAPK,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_MAPK,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
MTHFD1L	25902	genome.wustl.edu	37	6	151247259	151247259	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0E1-01A-11W-A071-09	TCGA-BH-A0E1-10A-01W-A071-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48706085-54be-4ea7-922e-46757a0b2979	e1bc14b6-02fc-4f82-89c6-c08d7482449f	6	151247259	151247259	G	A	SNP	MTHFD1L	NM_015440.3	human	genbank	58_37c	+1	validated	missense	c.1084	p.D362N	1.000	HMMPfam_FTHFS,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_FTHFS,PatternScan_FTHFS_1,PatternScan_FTHFS_2,HMMPfam_THF_DHG_CYH,HMMPfam_THF_DHG_CYH_C,superfamily_NAD(P)-binding Rossmann-fold domains,superfamily_P-loop containing nucleoside triphosphate hydrolases,superfamily_Aminoacid dehydrogenase-like N-terminal domain	-	no_errors
NCAPD2	9918	genome.wustl.edu	37	12	6630248	6630248	+	Silent	SNP	C	C	G	novel	unknown	TCGA-BH-A0E1-01A-11W-A071-09	TCGA-BH-A0E1-10A-01W-A071-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48706085-54be-4ea7-922e-46757a0b2979	e1bc14b6-02fc-4f82-89c6-c08d7482449f	12	6630248	6630248	C	G	SNP	NCAPD2	NM_014865.3	human	genbank	58_37c	+1	validated	silent	c.1686	p.L562	0.649	superfamily_ARM repeat	superfamily_ARM repeat	-	no_errors
OR8H2	390151	genome.wustl.edu	37	11	55872938	55872938	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0E1-01A-11W-A071-09	TCGA-BH-A0E1-10A-01W-A071-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48706085-54be-4ea7-922e-46757a0b2979	e1bc14b6-02fc-4f82-89c6-c08d7482449f	11	55872938	55872938	C	T	SNP	OR8H2	NM_001005200.1	human	genbank	58_37c	+1	provisional	silent	c.420	p.L140	0.000	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
OSCP1	127700	genome.wustl.edu	37	1	36915874	36915874	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0E1-01A-11W-A071-09	TCGA-BH-A0E1-10A-01W-A071-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48706085-54be-4ea7-922e-46757a0b2979	e1bc14b6-02fc-4f82-89c6-c08d7482449f	1	36915874	36915874	C	G	SNP	OSCP1	NM_145047.4	human	genbank	58_37c	-1	validated	missense	c.97	p.D33H	1.000	HMMPfam_Oscp1	HMMPfam_Oscp1	-	no_errors
PCNXL2	80003	genome.wustl.edu	37	1	233344363	233344363	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0E1-01A-11W-A071-09	TCGA-BH-A0E1-10A-01W-A071-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48706085-54be-4ea7-922e-46757a0b2979	e1bc14b6-02fc-4f82-89c6-c08d7482449f	1	233344363	233344363	C	G	SNP	PCNXL2	NM_014801.3	human	genbank	58_37c	-1	provisional	missense	c.2764	p.D922H	1.000	NULL	HMMPfam_Pecanex_C,PatternScan_DNAJ_1	-	no_errors
PPARGC1A	10891	genome.wustl.edu	37	4	23814725	23814725	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0E1-01A-11W-A071-09	TCGA-BH-A0E1-10A-01W-A071-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48706085-54be-4ea7-922e-46757a0b2979	e1bc14b6-02fc-4f82-89c6-c08d7482449f	4	23814725	23814725	C	T	SNP	PPARGC1A	NM_013261.3	human	genbank	58_37c	-1	reviewed	missense	c.1817	p.S606N	1.000	NULL	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD	-	no_errors
PRPF40B	25766	genome.wustl.edu	37	12	50025689	50025699	+	Frame_Shift_Del	DEL	CGGTGCCTGTC	CGGTGCCTGTC	-	novel	unknown	TCGA-BH-A0E1-01A-11W-A071-09	TCGA-BH-A0E1-10A-01W-A071-09	CGGTGCCTGTC	CGGTGCCTGTC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	48706085-54be-4ea7-922e-46757a0b2979	e1bc14b6-02fc-4f82-89c6-c08d7482449f	12	50025689	50025699	CGGTGCCTGTC	-	DEL	PRPF40B	NM_001031698.1	human	genbank	58_37c	+1	provisional	frame_shift_del	c.209_219	p.A70fs	0.836:0.210:0.993:1.000:1.000:1.000:0.998:0.876:1.000:1.000:1.000	NULL	HMMPfam_WW,HMMSmart_SM00456,PatternScan_WW_DOMAIN_1,superfamily_WW domain,HMMPfam_FF,HMMSmart_SM00441,superfamily_FF domain	-	no_errors
SERPINC1	462	genome.wustl.edu	37	1	173886366	173886366	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0E1-01A-11W-A071-09	TCGA-BH-A0E1-10A-01W-A071-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48706085-54be-4ea7-922e-46757a0b2979	e1bc14b6-02fc-4f82-89c6-c08d7482449f	1	173886366	173886366	G	A	SNP	SERPINC1	NM_000488.3	human	genbank	58_37c	-1	reviewed	missense	c.32	p.S11F	0.001	NULL	HMMPfam_Serpin,HMMSmart_SERPIN,PatternScan_SERPIN,superfamily_Prot_inh_serpin	-	no_errors
SIM1	6492	genome.wustl.edu	37	6	100897266	100897266	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0E1-01A-11W-A071-09	TCGA-BH-A0E1-10A-01W-A071-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48706085-54be-4ea7-922e-46757a0b2979	e1bc14b6-02fc-4f82-89c6-c08d7482449f	6	100897266	100897266	G	A	SNP	SIM1	NM_005068.2	human	genbank	58_37c	-1	reviewed	silent	c.516	p.N172	0.816	NULL	HMMSmart_PAS,HMMPfam_HLH,HMMSmart_HLH,HMMSmart_PAC,HMMPfam_SIM_C,HMMPfam_PAS_3,HMMPfam_PAS,superfamily_SSF55785	-	no_errors
TAS2R10	50839	genome.wustl.edu	37	12	10978407	10978407	+	Nonsense_Mutation	SNP	A	A	C	novel	unknown	TCGA-BH-A0E1-01A-11W-A071-09	TCGA-BH-A0E1-10A-01W-A071-09	A	A	A	C	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48706085-54be-4ea7-922e-46757a0b2979	e1bc14b6-02fc-4f82-89c6-c08d7482449f	12	10978407	10978407	A	C	SNP	TAS2R10	NM_023921.1	human	genbank	58_37c	-1	reviewed	nonsense	c.462	p.Y154*	0.000	HMMPfam_TAS2R,superfamily_Family A G protein-coupled receptor-like	HMMPfam_TAS2R,superfamily_Family A G protein-coupled receptor-like	-	no_errors
TLR4	7099	genome.wustl.edu	37	9	120476816	120476816	+	Missense_Mutation	SNP	C	C	T	rs55786277	byCluster;byFrequency	TCGA-BH-A0E1-01A-11W-A071-09	TCGA-BH-A0E1-10A-01W-A071-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48706085-54be-4ea7-922e-46757a0b2979	e1bc14b6-02fc-4f82-89c6-c08d7482449f	9	120476816	120476816	C	T	SNP	TLR4	NM_138554.3	human	genbank	58_37c	+1	reviewed	missense	c.2410	p.R804W	0.000	HMMPfam_TIR,HMMSmart_SM00255,superfamily_Toll/Interleukin receptor TIR domain	HMMPfam_TIR,HMMSmart_SM00255,superfamily_Toll/Interleukin receptor TIR domain,HMMPfam_LRRCT,HMMSmart_SM00082,HMMPfam_LRR_1,HMMSmart_SM00369,HMMSmart_SM00365,superfamily_L domain-like	-	no_errors
TLR7	51284	genome.wustl.edu	37	X	12903835	12903835	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0E1-01A-11W-A071-09	TCGA-BH-A0E1-10A-01W-A071-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48706085-54be-4ea7-922e-46757a0b2979	e1bc14b6-02fc-4f82-89c6-c08d7482449f	X	12903835	12903835	C	T	SNP	TLR7	NM_016562.3	human	genbank	58_37c	+1	reviewed	missense	c.208	p.L70F	1.000	superfamily_L domain-like	HMMPfam_TIR,HMMSmart_SM00255,superfamily_Toll/Interleukin receptor TIR domain,HMMPfam_LRRCT,HMMSmart_SM00082,HMMPfam_LRR_1,HMMSmart_SM00369,HMMSmart_SM00365,superfamily_L domain-like	-	no_errors
TMEM106A	113277	genome.wustl.edu	37	17	41368593	41368593	+	Silent	SNP	T	T	C	novel	unknown	TCGA-BH-A0E1-01A-11W-A071-09	TCGA-BH-A0E1-10A-01W-A071-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48706085-54be-4ea7-922e-46757a0b2979	e1bc14b6-02fc-4f82-89c6-c08d7482449f	17	41368593	41368593	T	C	SNP	TMEM106A	NM_145041.1	human	genbank	58_37c	+1	provisional	silent	c.555	p.P185	1.000	HMMPfam_DUF1356	HMMPfam_DUF1356	-	no_errors
TMEM167A	153339	genome.wustl.edu	37	5	82352947	82352947	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0E1-01A-11W-A071-09	TCGA-BH-A0E1-10A-01W-A071-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48706085-54be-4ea7-922e-46757a0b2979	e1bc14b6-02fc-4f82-89c6-c08d7482449f	5	82352947	82352947	C	T	SNP	TMEM167A	NM_174909.4	human	genbank	58_37c	-1	validated	missense	c.175	p.V59I	0.023	NULL	HMMPfam_DUF1242	-	no_errors
UBR4	23352	genome.wustl.edu	37	1	19468234	19468234	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0E1-01A-11W-A071-09	TCGA-BH-A0E1-10A-01W-A071-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48706085-54be-4ea7-922e-46757a0b2979	e1bc14b6-02fc-4f82-89c6-c08d7482449f	1	19468234	19468234	C	G	SNP	UBR4	NM_020765.2	human	genbank	58_37c	-1	validated	missense	c.8217	p.E2739D	1.000	NULL	HMMPfam_zf-UBR,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00396,superfamily_ARM repeat,PatternScan_ASP_GLU_RACEMASE_1	-	no_errors
UFC1	51506	genome.wustl.edu	37	1	161127913	161127913	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0E1-01A-11W-A071-09	TCGA-BH-A0E1-10A-01W-A071-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48706085-54be-4ea7-922e-46757a0b2979	e1bc14b6-02fc-4f82-89c6-c08d7482449f	1	161127913	161127913	G	C	SNP	UFC1	NM_016406.3	human	genbank	58_37c	+1	validated	missense	c.335	p.G112A	1.000	HMMPfam_UFC1	HMMPfam_UFC1	-	no_errors
VAMP2	6844	genome.wustl.edu	37	17	8064834	8064834	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0E1-01A-11W-A071-09	TCGA-BH-A0E1-10A-01W-A071-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48706085-54be-4ea7-922e-46757a0b2979	e1bc14b6-02fc-4f82-89c6-c08d7482449f	17	8064834	8064834	G	A	SNP	VAMP2	NM_014232.2	human	genbank	58_37c	-1	reviewed	silent	c.291	p.I97	0.998	HMMPfam_Synaptobrevin	HMMPfam_Synaptobrevin,PatternScan_SYNAPTOBREVIN	-	no_errors
VPS13B	157680	genome.wustl.edu	37	8	100520093	100520093	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-BH-A0E1-01A-11W-A071-09	TCGA-BH-A0E1-10A-01W-A071-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48706085-54be-4ea7-922e-46757a0b2979	e1bc14b6-02fc-4f82-89c6-c08d7482449f	8	100520093	100520093	T	C	SNP	VPS13B	NM_017890.3	human	genbank	58_37c	+1	reviewed	missense	c.4253	p.I1418T	1.000	NULL	PatternScan_ZINC_PROTEASE	-	no_errors
ZBTB22	9278	genome.wustl.edu	37	6	33284027	33284027	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0E1-01A-11W-A071-09	TCGA-BH-A0E1-10A-01W-A071-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48706085-54be-4ea7-922e-46757a0b2979	e1bc14b6-02fc-4f82-89c6-c08d7482449f	6	33284027	33284027	C	T	SNP	ZBTB22	NM_001145338.1	human	genbank	58_37c	-1	validated	missense	c.667	p.E223K	0.990	NULL	HMMSmart_SM00225,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,superfamily_POZ domain,HMMPfam_BTB,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
