Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ANGPT4	51378	genome.wustl.edu	37	20	865878	865878	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0H7-01A-13W-A071-09	TCGA-BH-A0H7-10A-01W-A071-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8623830e-3fdd-4707-83e9-5f528105aa55	bd560d56-fd13-4213-8e29-2a99fee0a055	20	865878	865878	C	T	SNP	ANGPT4	NM_015985.2	human	genbank	58_37c	-1	reviewed	silent	c.678	p.T226	0.971	NULL	HMMPfam_Fibrinogen_C,HMMSmart_FBG,PatternScan_FIBRIN_AG_C_DOMAIN,superfamily_Fibrinogen_a/b/g_C	-	no_errors
BAT2L1	0	genome.wustl.edu	37	9	134312031	134312031	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0H7-01A-13W-A071-09	TCGA-BH-A0H7-10A-01W-A071-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8623830e-3fdd-4707-83e9-5f528105aa55	bd560d56-fd13-4213-8e29-2a99fee0a055	9	134312031	134312031	G	A	SNP	BAT2L1	NM_013318.3	human	genbank	58_37c	+1	validated	silent	c.318	p.P106	1.000	HMMPfam_BAT2_N	HMMPfam_BAT2_N	-	no_errors
C8orf34	116328	genome.wustl.edu	37	8	69434116	69434116	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0H7-01A-13W-A071-09	TCGA-BH-A0H7-10A-01W-A071-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8623830e-3fdd-4707-83e9-5f528105aa55	bd560d56-fd13-4213-8e29-2a99fee0a055	8	69434116	69434116	C	T	SNP	C8orf34	NM_052958.1	human	genbank	58_37c	+1	predicted	missense	c.515	p.P172L	0.998	NULL	NULL	-	no_errors
CCDC146	57639	genome.wustl.edu	37	7	76871096	76871096	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0H7-01A-13W-A071-09	TCGA-BH-A0H7-10A-01W-A071-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8623830e-3fdd-4707-83e9-5f528105aa55	bd560d56-fd13-4213-8e29-2a99fee0a055	7	76871096	76871096	G	C	SNP	CCDC146	NM_020879.2	human	genbank	58_37c	+1	validated	missense	c.328	p.D110H	0.951	NULL	NULL	-	no_errors
CCL4L2	388372	genome.wustl.edu	37	17	34641454	34641454	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0H7-01A-13W-A071-09	TCGA-BH-A0H7-10A-01W-A071-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8623830e-3fdd-4707-83e9-5f528105aa55	bd560d56-fd13-4213-8e29-2a99fee0a055	17	34641454	34641454	C	T	SNP	CCL4L2	NM_207007.2	human	genbank	58_37c	+1	reviewed	nonsense	c.196	p.Q66*	0.873	PatternScan_SMALL_CYTOKINES_CC,HMMPfam_IL8,HMMSmart_SM00199,superfamily_Interleukin 8-like chemokines	PatternScan_SMALL_CYTOKINES_CC,HMMPfam_IL8,HMMSmart_SM00199,superfamily_Interleukin 8-like chemokines	-	no_errors
CD22	933	genome.wustl.edu	37	19	35827245	35827245	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-BH-A0H7-01A-13W-A071-09	TCGA-BH-A0H7-10A-01W-A071-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8623830e-3fdd-4707-83e9-5f528105aa55	bd560d56-fd13-4213-8e29-2a99fee0a055	19	35827245	35827245	G	A	SNP	CD22	NM_001771.3	human	genbank	58_37c	+1	validated	splice_site	c.718+1	e3+1	1.000	-	-	-	no_errors
CDC45L	8318	genome.wustl.edu	37	22	19504407	19504407	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0H7-01A-13W-A071-09	TCGA-BH-A0H7-10A-01W-A071-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8623830e-3fdd-4707-83e9-5f528105aa55	bd560d56-fd13-4213-8e29-2a99fee0a055	22	19504407	19504407	G	A	SNP	CDC45	NM_003504.3	human	genbank	58_37c	+1	reviewed	missense	c.1627	p.D543N	1.000	HMMPfam_CDC45	HMMPfam_CDC45	-	no_errors
CDH26	60437	genome.wustl.edu	37	20	58571003	58571003	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0H7-01A-13W-A071-09	TCGA-BH-A0H7-10A-01W-A071-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8623830e-3fdd-4707-83e9-5f528105aa55	bd560d56-fd13-4213-8e29-2a99fee0a055	20	58571003	58571003	C	G	SNP	CDH26	NM_177980.2	human	genbank	58_37c	+1	reviewed	missense	c.1782	p.I594M	0.072	HMMPfam_Cadherin,superfamily_Cadherin	HMMPfam_Cadherin,HMMSmart_CA,PatternScan_CADHERIN_1,superfamily_Cadherin	-	no_errors
CHD6	84181	genome.wustl.edu	37	20	40126068	40126068	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0H7-01A-13W-A071-09	TCGA-BH-A0H7-10A-01W-A071-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8623830e-3fdd-4707-83e9-5f528105aa55	bd560d56-fd13-4213-8e29-2a99fee0a055	20	40126068	40126068	G	A	SNP	CHD6	NM_032221.3	human	genbank	58_37c	-1	reviewed	nonsense	c.1048	p.R350*	1.000	HMMPfam_Chromo,HMMSmart_SM00298,superfamily_Chromo domain-like	HMMPfam_SNF2_N,HMMPfam_Chromo,HMMSmart_SM00298,HMMPfam_Helicase_C,HMMSmart_SM00490,PatternScan_DEAH_ATP_HELICASE,HMMPfam_BRK,HMMSmart_SM00592,HMMSmart_SM00487,superfamily_Chromo domain-like,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
CHSY3	337876	genome.wustl.edu	37	5	129520729	129520729	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0H7-01A-13W-A071-09	TCGA-BH-A0H7-10A-01W-A071-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8623830e-3fdd-4707-83e9-5f528105aa55	bd560d56-fd13-4213-8e29-2a99fee0a055	5	129520729	129520729	G	A	SNP	CHSY3	NM_175856.4	human	genbank	58_37c	+1	validated	missense	c.1894	p.D632N	1.000	HMMPfam_CHGN,superfamily_SSF53448	HMMPfam_CHGN,superfamily_SSF53448	-	no_errors
DGKB	1607	genome.wustl.edu	37	7	14216525	14216525	+	Splice_Site	SNP	C	C	T	novel	unknown	TCGA-BH-A0H7-01A-13W-A071-09	TCGA-BH-A0H7-10A-01W-A071-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8623830e-3fdd-4707-83e9-5f528105aa55	bd560d56-fd13-4213-8e29-2a99fee0a055	7	14216525	14216525	C	T	SNP	DGKB	NM_004080.2	human	genbank	58_37c	-1	reviewed	splice_site	c.2247-1	e24-1	1.000	-	-	-	no_errors
DYRK3	8444	genome.wustl.edu	37	1	206820860	206820860	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A0H7-01A-13W-A071-09	TCGA-BH-A0H7-10A-01W-A071-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8623830e-3fdd-4707-83e9-5f528105aa55	bd560d56-fd13-4213-8e29-2a99fee0a055	1	206820860	206820860	G	T	SNP	DYRK3	NM_003582.2	human	genbank	58_37c	+1	reviewed	missense	c.317	p.S106I	0.000	NULL	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
FAM160A2	84067	genome.wustl.edu	37	11	6239359	6239359	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-BH-A0H7-01A-13W-A071-09	TCGA-BH-A0H7-10A-01W-A071-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8623830e-3fdd-4707-83e9-5f528105aa55	bd560d56-fd13-4213-8e29-2a99fee0a055	11	6239359	6239359	T	C	SNP	FAM160A2	NM_032127.3	human	genbank	58_37c	-1	validated	missense	c.1499	p.D500G	1.000	NULL	HMMPfam_RAI16-like	-	no_errors
FAM47B	170062	genome.wustl.edu	37	X	34962578	34962578	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0H7-01A-13W-A071-09	TCGA-BH-A0H7-10A-01W-A071-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8623830e-3fdd-4707-83e9-5f528105aa55	bd560d56-fd13-4213-8e29-2a99fee0a055	X	34962578	34962578	G	A	SNP	FAM47B	NM_152631.2	human	genbank	58_37c	+1	validated	missense	c.1630	p.G544R	0.001	NULL	NULL	-	no_errors
FAM75A3	727830	genome.wustl.edu	37	9	40705542	40705542	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0H7-01A-13W-A071-09	TCGA-BH-A0H7-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8623830e-3fdd-4707-83e9-5f528105aa55	bd560d56-fd13-4213-8e29-2a99fee0a055	9	40705542	40705542	C	T	SNP	FAM75A3	NM_001083124.1	human	genbank	58_37c	+1	predicted	missense	c.3199	p.R1067W	0.000	NULL	NULL	-	no_errors
FGL2	10875	genome.wustl.edu	37	7	76826243	76826243	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0H7-01A-13W-A071-09	TCGA-BH-A0H7-10A-01W-A071-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8623830e-3fdd-4707-83e9-5f528105aa55	bd560d56-fd13-4213-8e29-2a99fee0a055	7	76826243	76826243	C	G	SNP	FGL2	NM_006682.2	human	genbank	58_37c	-1	reviewed	missense	c.673	p.E225Q	1.000	HMMPfam_Fibrinogen_C,HMMSmart_SM00186,superfamily_Fibrinogen C-terminal domain-like	HMMPfam_Fibrinogen_C,HMMSmart_SM00186,PatternScan_FIBRIN_AG_C_DOMAIN,superfamily_Fibrinogen C-terminal domain-like	-	no_errors
GIMAP6	474344	genome.wustl.edu	37	7	150324841	150324841	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0H7-01A-13W-A071-09	TCGA-BH-A0H7-10A-01W-A071-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8623830e-3fdd-4707-83e9-5f528105aa55	bd560d56-fd13-4213-8e29-2a99fee0a055	7	150324841	150324841	G	A	SNP	GIMAP6	NM_024711.4	human	genbank	58_37c	-1	reviewed	missense	c.845	p.A282V	0.000	NULL	HMMPfam_AIG1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
GLRA2	2742	genome.wustl.edu	37	X	14627177	14627177	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0H7-01A-13W-A071-09	TCGA-BH-A0H7-10A-01W-A071-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8623830e-3fdd-4707-83e9-5f528105aa55	bd560d56-fd13-4213-8e29-2a99fee0a055	X	14627177	14627177	G	C	SNP	GLRA2	NM_001118885.1	human	genbank	58_37c	+1	reviewed	missense	c.780	p.Q260H	1.000	superfamily_Neurotransmitter-gated ion-channel transmembrane pore	HMMPfam_Neur_chan_memb,superfamily_Neurotransmitter-gated ion-channel transmembrane pore,HMMPfam_Neur_chan_LBD,superfamily_Nicotinic receptor ligand binding domain-like,PatternScan_NEUROTR_ION_CHANNEL	-	no_errors
GPR116	221395	genome.wustl.edu	37	6	46830787	46830787	+	Silent	SNP	C	C	T	rs144652122	byCluster;by1000genomes	TCGA-BH-A0H7-01A-13W-A071-09	TCGA-BH-A0H7-10A-01W-A071-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8623830e-3fdd-4707-83e9-5f528105aa55	bd560d56-fd13-4213-8e29-2a99fee0a055	6	46830787	46830787	C	T	SNP	GPR116	NM_001098518.1	human	genbank	58_37c	-1	validated	silent	c.2037	p.P679	0.211	NULL	HMMPfam_SEA,HMMPfam_GPS,HMMSmart_SM00303,HMMPfam_7tm_2,HMMSmart_SM00408,HMMSmart_SM00409,PatternScan_EGF_2,HMMPfam_ig,PatternScan_G_PROTEIN_RECEP_F2_2,superfamily_Immunoglobulin,superfamily_SEA domain	-	no_errors
GRXCR2	0	genome.wustl.edu	37	5	145239466	145239466	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0H7-01A-13W-A071-09	TCGA-BH-A0H7-10A-01W-A071-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8623830e-3fdd-4707-83e9-5f528105aa55	bd560d56-fd13-4213-8e29-2a99fee0a055	5	145239466	145239466	G	A	SNP	GRXCR2	NM_001080516.1	human	genbank	58_37c	-1	provisional	missense	c.577	p.P193S	0.293	NULL	NULL	-	no_errors
HOMER1	9456	genome.wustl.edu	37	5	78742884	78742884	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0H7-01A-13W-A071-09	TCGA-BH-A0H7-10A-01W-A071-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8623830e-3fdd-4707-83e9-5f528105aa55	bd560d56-fd13-4213-8e29-2a99fee0a055	5	78742884	78742884	G	C	SNP	HOMER1	NM_004272.3	human	genbank	58_37c	-1	validated	missense	c.379	p.P127A	1.000	superfamily_PH domain-like	HMMPfam_WH1,HMMSmart_SM00461,superfamily_PH domain-like	-	no_errors
HOOK1	51361	genome.wustl.edu	37	1	60328544	60328544	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0H7-01A-13W-A071-09	TCGA-BH-A0H7-10A-01W-A071-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8623830e-3fdd-4707-83e9-5f528105aa55	bd560d56-fd13-4213-8e29-2a99fee0a055	1	60328544	60328544	G	A	SNP	HOOK1	ENST00000371208	human	ensembl	58_37c	+1	known	missense	c.1621	p.E541K	1.000	HMMPfam_HOOK	HMMPfam_HOOK,superfamily_Prefoldin	-	no_errors
HS6ST2	90161	genome.wustl.edu	37	X	131762517	131762517	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0H7-01A-13W-A071-09	TCGA-BH-A0H7-10A-01W-A071-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8623830e-3fdd-4707-83e9-5f528105aa55	bd560d56-fd13-4213-8e29-2a99fee0a055	X	131762517	131762517	G	A	SNP	HS6ST2	NM_001077188.1	human	genbank	58_37c	-1	reviewed	missense	c.1672	p.R558C	1.000	HMMPfam_HS6ST	HMMPfam_HS6ST	-	no_errors
IQSEC2	23096	genome.wustl.edu	37	X	53283878	53283878	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0H7-01A-13W-A071-09	TCGA-BH-A0H7-10A-01W-A071-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8623830e-3fdd-4707-83e9-5f528105aa55	bd560d56-fd13-4213-8e29-2a99fee0a055	X	53283878	53283878	G	A	SNP	IQSEC2	NM_001111125.1	human	genbank	58_37c	-1	validated	missense	c.1235	p.S412L	1.000	NULL	HMMPfam_Sec7,HMMSmart_Sec7,superfamily_Sec7,HMMSmart_PH,superfamily_SSF50729	-	no_errors
KCNA4	3739	genome.wustl.edu	37	11	30033717	30033717	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0H7-01A-13W-A071-09	TCGA-BH-A0H7-10A-01W-A071-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8623830e-3fdd-4707-83e9-5f528105aa55	bd560d56-fd13-4213-8e29-2a99fee0a055	11	30033717	30033717	C	T	SNP	KCNA4	NM_002233.2	human	genbank	58_37c	-1	reviewed	missense	c.509	p.R170H	1.000	NULL	HMMSmart_SM00225,HMMPfam_K_tetra,HMMPfam_Ion_trans,superfamily_POZ domain,HMMPfam_K_channel_TID,superfamily_Voltage-gated potassium channels	-	no_errors
LHX6	26468	genome.wustl.edu	37	9	124971974	124971974	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0H7-01A-13W-A071-09	TCGA-BH-A0H7-10A-01W-A071-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8623830e-3fdd-4707-83e9-5f528105aa55	bd560d56-fd13-4213-8e29-2a99fee0a055	9	124971974	124971974	C	T	SNP	LHX6	NM_014368.3	human	genbank	58_37c	-1	reviewed	silent	c.1077	p.V359	1.000	NULL	HMMPfam_Homeobox,HMMSmart_HOX,HMMPfam_LIM,HMMSmart_LIM,PatternScan_LIM_DOMAIN_1,superfamily_Homeodomain_like,PatternScan_HOMEOBOX_1,superfamily_SSF57716	-	no_errors
LOC440419	440419	genome.wustl.edu	37	17	25749251	25749251	+	RNA	SNP	A	A	G	novel	unknown	TCGA-BH-A0H7-01A-13W-A071-09	TCGA-BH-A0H7-10A-01W-A071-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8623830e-3fdd-4707-83e9-5f528105aa55	bd560d56-fd13-4213-8e29-2a99fee0a055	17	25749251	25749251	A	G	SNP	LOC440419	XR_040504.2	human	genbank	58_37c	+1	model	rna	NULL	NULL	0.142	-	-	-	no_errors
METTL9	51108	genome.wustl.edu	37	16	21636383	21636383	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0H7-01A-13W-A071-09	TCGA-BH-A0H7-10A-01W-A071-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8623830e-3fdd-4707-83e9-5f528105aa55	bd560d56-fd13-4213-8e29-2a99fee0a055	16	21636383	21636383	G	C	SNP	METTL9	NM_016025.3	human	genbank	58_37c	+1	validated	missense	c.698	p.R233T	0.996	HMMPfam_DREV,superfamily_S-adenosyl-L-methionine-dependent methyltransferases	HMMPfam_DREV,superfamily_S-adenosyl-L-methionine-dependent methyltransferases	-	no_errors
MIOS	54468	genome.wustl.edu	37	7	7636043	7636043	+	Silent	SNP	A	A	T	novel	unknown	TCGA-BH-A0H7-01A-13W-A071-09	TCGA-BH-A0H7-10A-01W-A071-09	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8623830e-3fdd-4707-83e9-5f528105aa55	bd560d56-fd13-4213-8e29-2a99fee0a055	7	7636043	7636043	A	T	SNP	MIOS	NM_019005.3	human	genbank	58_37c	+1	validated	silent	c.2352	p.R784	1.000	NULL	HMMSmart_SM00320,superfamily_WD40 repeat-like	-	no_errors
MOGAT3	346606	genome.wustl.edu	37	7	100839208	100839208	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0H7-01A-13W-A071-09	TCGA-BH-A0H7-10A-01W-A071-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8623830e-3fdd-4707-83e9-5f528105aa55	bd560d56-fd13-4213-8e29-2a99fee0a055	7	100839208	100839208	C	T	SNP	MOGAT3	ENST00000379423	human	ensembl	58_37c	-1	known	missense	c.842	p.R281H	0.000	NULL	HMMPfam_DAGAT	-	no_errors
MRPS31	10240	genome.wustl.edu	37	13	41333178	41333178	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0H7-01A-13W-A071-09	TCGA-BH-A0H7-10A-01W-A071-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8623830e-3fdd-4707-83e9-5f528105aa55	bd560d56-fd13-4213-8e29-2a99fee0a055	13	41333178	41333178	C	G	SNP	MRPS31	NM_005830.3	human	genbank	58_37c	-1	reviewed	missense	c.505	p.D169H	1.000	NULL	NULL	-	no_errors
OR4A15	81328	genome.wustl.edu	37	11	55135676	55135676	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A0H7-01A-13W-A071-09	TCGA-BH-A0H7-10A-01W-A071-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8623830e-3fdd-4707-83e9-5f528105aa55	bd560d56-fd13-4213-8e29-2a99fee0a055	11	55135676	55135676	C	A	SNP	OR4A15	NM_001005275.1	human	genbank	58_37c	+1	provisional	missense	c.317	p.A106D	0.003	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
PI3	5266	genome.wustl.edu	37	20	43804672	43804672	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0H7-01A-13W-A071-09	TCGA-BH-A0H7-10A-01W-A071-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8623830e-3fdd-4707-83e9-5f528105aa55	bd560d56-fd13-4213-8e29-2a99fee0a055	20	43804672	43804672	G	A	SNP	PI3	NM_002638.3	human	genbank	58_37c	+1	reviewed	missense	c.250	p.A84T	0.001	HMMPfam_WAP,HMMSmart_SM00217,superfamily_Elafin-like	PatternScan_SVP_I,HMMPfam_WAP,HMMSmart_SM00217,superfamily_Elafin-like,PatternScan_4_DISULFIDE_CORE,HMMPfam_Cementoin	-	no_errors
PLEKHF2	79666	genome.wustl.edu	37	8	96166776	96166776	+	Silent	SNP	T	T	C	novel	unknown	TCGA-BH-A0H7-01A-13W-A071-09	TCGA-BH-A0H7-10A-01W-A071-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8623830e-3fdd-4707-83e9-5f528105aa55	bd560d56-fd13-4213-8e29-2a99fee0a055	8	96166776	96166776	T	C	SNP	PLEKHF2	NM_024613.3	human	genbank	58_37c	+1	validated	silent	c.504	p.P168	0.996	HMMPfam_FYVE,HMMSmart_FYVE,superfamily_FYVE_PHD_ZnF	HMMPfam_FYVE,HMMSmart_FYVE,HMMPfam_PH,HMMSmart_PH,superfamily_FYVE_PHD_ZnF,superfamily_SSF50729	-	no_errors
PXDN	7837	genome.wustl.edu	37	2	1652010	1652010	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0H7-01A-13W-A071-09	TCGA-BH-A0H7-10A-01W-A071-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8623830e-3fdd-4707-83e9-5f528105aa55	bd560d56-fd13-4213-8e29-2a99fee0a055	2	1652010	1652010	G	A	SNP	PXDN	NM_012293.1	human	genbank	58_37c	-1	validated	missense	c.3542	p.A1181V	0.736	HMMPfam_An_peroxidase,superfamily_Heme-dependent peroxidases	HMMPfam_LRRCT,HMMSmart_SM00082,HMMPfam_VWC,HMMSmart_SM00214,PatternScan_VWFC_1,HMMPfam_LRR_1,HMMPfam_An_peroxidase,HMMSmart_SM00369,HMMSmart_SM00408,HMMSmart_SM00409,superfamily_Heme-dependent peroxidases,HMMPfam_I-set,superfamily_Immunoglobulin,superfamily_L domain-like	-	no_errors
SEC24B	10427	genome.wustl.edu	37	4	110394171	110394171	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-BH-A0H7-01A-13W-A071-09	TCGA-BH-A0H7-10A-01W-A071-09	T	T	T	G	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8623830e-3fdd-4707-83e9-5f528105aa55	bd560d56-fd13-4213-8e29-2a99fee0a055	4	110394171	110394171	T	G	SNP	SEC24B	NM_006323.2	human	genbank	58_37c	+1	reviewed	missense	c.889	p.L297V	0.697	NULL	PatternScan_MIP,HMMPfam_zf-Sec23_Sec24,superfamily_Zn-finger domain of Sec23/24,HMMPfam_Sec23_trunk,HMMPfam_Sec23_helical,superfamily_Helical domain of Sec23/24,HMMPfam_Gelsolin,HMMPfam_Sec23_BS,superfamily_vWA-like,superfamily_beta-sandwich domain of Sec23/24,superfamily_C-terminal gelsolin-like domain of Sec23/24	-	no_errors
SKIL	6498	genome.wustl.edu	37	3	170078760	170078760	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-BH-A0H7-01A-13W-A071-09	TCGA-BH-A0H7-10A-01W-A071-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8623830e-3fdd-4707-83e9-5f528105aa55	bd560d56-fd13-4213-8e29-2a99fee0a055	3	170078760	170078760	A	G	SNP	SKIL	NM_005414.3	human	genbank	58_37c	+1	validated	missense	c.641	p.N214S	1.000	HMMPfam_Ski_Sno,superfamily_Putative DNA-binding domain	HMMPfam_Ski_Sno,superfamily_Putative DNA-binding domain,superfamily_SAND domain-like,HMMPfam_c-SKI_SMAD_bind	-	no_errors
SPAG16	79582	genome.wustl.edu	37	2	214215282	214215282	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0H7-01A-13W-A071-09	TCGA-BH-A0H7-10A-01W-A071-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8623830e-3fdd-4707-83e9-5f528105aa55	bd560d56-fd13-4213-8e29-2a99fee0a055	2	214215282	214215282	G	A	SNP	SPAG16	NM_024532.3	human	genbank	58_37c	+1	validated	silent	c.675	p.P225	1.000	superfamily_WD40 repeat-like	HMMSmart_SM00320,superfamily_WD40 repeat-like,PatternScan_WD_REPEATS_1,HMMPfam_WD40	-	no_errors
SPR	6697	genome.wustl.edu	37	2	73118645	73118645	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0H7-01A-13W-A071-09	TCGA-BH-A0H7-10A-01W-A071-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8623830e-3fdd-4707-83e9-5f528105aa55	bd560d56-fd13-4213-8e29-2a99fee0a055	2	73118645	73118645	C	T	SNP	SPR	NM_003124.4	human	genbank	58_37c	+1	reviewed	silent	c.765	p.H255	0.713	superfamily_NAD(P)-bd	HMMPfam_adh_short,superfamily_NAD(P)-bd	-	no_errors
THUMPD2	80745	genome.wustl.edu	37	2	39983082	39983082	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0H7-01A-13W-A071-09	TCGA-BH-A0H7-10A-01W-A071-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8623830e-3fdd-4707-83e9-5f528105aa55	bd560d56-fd13-4213-8e29-2a99fee0a055	2	39983082	39983082	C	T	SNP	THUMPD2	NM_025264.4	human	genbank	58_37c	-1	validated	missense	c.820	p.D274N	1.000	HMMPfam_UPF0020,superfamily_SSF53335	HMMPfam_UPF0020,HMMPfam_THUMP,superfamily_SSF53335	-	no_errors
TP53	7157	genome.wustl.edu	37	17	7577547	7577547	+	Missense_Mutation	SNP	C	C	T	rs121912656	unknown	TCGA-BH-A0H7-01A-13W-A071-09	TCGA-BH-A0H7-10A-01W-A071-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8623830e-3fdd-4707-83e9-5f528105aa55	bd560d56-fd13-4213-8e29-2a99fee0a055	17	7577547	7577547	C	T	SNP	TP53	NM_000546.4	human	genbank	58_37c	-1	reviewed	missense	c.734	p.G245D	1.000	PatternScan_P53,superfamily_p53-like transcription factors,HMMPfam_P53	PatternScan_P53,superfamily_p53-like transcription factors,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain,HMMPfam_P53,HMMPfam_P53_TAD	-	no_errors
TRAIP	10293	genome.wustl.edu	37	3	49878478	49878478	+	Silent	SNP	C	C	A	novel	unknown	TCGA-BH-A0H7-01A-13W-A071-09	TCGA-BH-A0H7-10A-01W-A071-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8623830e-3fdd-4707-83e9-5f528105aa55	bd560d56-fd13-4213-8e29-2a99fee0a055	3	49878478	49878478	C	A	SNP	TRAIP	NM_005879.2	human	genbank	58_37c	-1	reviewed	silent	c.645	p.R215	1.000	superfamily_Prefoldin	HMMSmart_RING,superfamily_Prefoldin,PatternScan_ZF_RING_1,HMMPfam_zf-C3HC4,superfamily_SSF57850	-	no_errors
USP34	9736	genome.wustl.edu	37	2	61417673	61417673	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-BH-A0H7-01A-13W-A071-09	TCGA-BH-A0H7-10A-01W-A071-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8623830e-3fdd-4707-83e9-5f528105aa55	bd560d56-fd13-4213-8e29-2a99fee0a055	2	61417673	61417673	T	C	SNP	USP34	NM_014709.3	human	genbank	58_37c	-1	validated	missense	c.9709	p.M3237V	1.000	NULL	HMMPfam_UCH,PatternScan_UCH_2_1,PatternScan_UCH_2_2,superfamily_Cysteine proteinases	-	no_errors
ZNF513	130557	genome.wustl.edu	37	2	27600657	27600657	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0H7-01A-13W-A071-09	TCGA-BH-A0H7-10A-01W-A071-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8623830e-3fdd-4707-83e9-5f528105aa55	bd560d56-fd13-4213-8e29-2a99fee0a055	2	27600657	27600657	G	A	SNP	ZNF513	NM_144631.4	human	genbank	58_37c	-1	validated	missense	c.1381	p.R461C	1.000	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZNF536	9745	genome.wustl.edu	37	19	31038893	31038893	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0H7-01A-13W-A071-09	TCGA-BH-A0H7-10A-01W-A071-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	8623830e-3fdd-4707-83e9-5f528105aa55	bd560d56-fd13-4213-8e29-2a99fee0a055	19	31038893	31038893	G	A	SNP	ZNF536	NM_014717.1	human	genbank	58_37c	+1	provisional	silent	c.2367	p.T789	0.999	HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,superfamily_SSF57667	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
