Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
AKT1	207	genome.wustl.edu	37	14	105246551	105246551	+	Missense_Mutation	SNP	C	C	T	rs121434592	unknown	TCGA-BH-A0W4-01A-11D-A10G-09	TCGA-BH-A0W4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fdafddde-aff1-42b4-bf94-a95861eacf53	7ec51376-daf4-4268-834b-55766654128e	14	105246551	105246551	C	T	SNP	AKT1	NM_001014431.1	human	genbank	58_37c	-1	reviewed	missense	c.49	p.E17K	1.000	HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like	HMMSmart_SM00133,HMMSmart_SM00219,HMMPfam_PH,HMMSmart_SM00233,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,HMMPfam_Pkinase_C,superfamily_PH domain-like	-	no_errors
ANO7	50636	genome.wustl.edu	37	2	242155637	242155637	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0W4-01A-11D-A10G-09	TCGA-BH-A0W4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fdafddde-aff1-42b4-bf94-a95861eacf53	7ec51376-daf4-4268-834b-55766654128e	2	242155637	242155637	C	T	SNP	ANO7	NM_001001891.3	human	genbank	58_37c	+1	validated	silent	c.2118	p.D706	0.573	HMMPfam_DUF590	HMMPfam_DUF590	-	no_errors
APBB3	10307	genome.wustl.edu	37	5	139939900	139939900	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-BH-A0W4-01A-11D-A10G-09	TCGA-BH-A0W4-10A-01D-A10G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fdafddde-aff1-42b4-bf94-a95861eacf53	7ec51376-daf4-4268-834b-55766654128e	5	139939900	139939900	T	C	SNP	APBB3	NM_006051.3	human	genbank	58_37c	-1	reviewed	missense	c.1243	p.M415V	1.000	HMMPfam_PID,HMMSmart_SM00462,superfamily_PH domain-like	HMMPfam_WW,HMMSmart_SM00456,PatternScan_WW_DOMAIN_1,superfamily_WW domain,HMMPfam_PID,HMMSmart_SM00462,superfamily_PH domain-like	-	no_errors
C11orf40	143501	genome.wustl.edu	37	11	4594539	4594539	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-BH-A0W4-01A-11D-A10G-09	TCGA-BH-A0W4-10A-01D-A10G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fdafddde-aff1-42b4-bf94-a95861eacf53	7ec51376-daf4-4268-834b-55766654128e	11	4594539	4594539	A	G	SNP	C11orf40	NM_144663.1	human	genbank	58_37c	-1	provisional	missense	c.305	p.V102A	0.001	NULL	NULL	-	no_errors
C11orf84	144097	genome.wustl.edu	37	11	63585750	63585750	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0W4-01A-11D-A10G-09	TCGA-BH-A0W4-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fdafddde-aff1-42b4-bf94-a95861eacf53	7ec51376-daf4-4268-834b-55766654128e	11	63585750	63585750	G	A	SNP	C11orf84	NM_138471.1	human	genbank	58_37c	+1	predicted	missense	c.520	p.E174K	0.987	NULL	NULL	-	no_errors
CDK11A	0	genome.wustl.edu	37	1	1653040	1653040	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-BH-A0W4-01A-11D-A10G-09	TCGA-BH-A0W4-10A-01D-A10G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fdafddde-aff1-42b4-bf94-a95861eacf53	7ec51376-daf4-4268-834b-55766654128e	1	1653040	1653040	T	A	SNP	CDK11A	NM_024011.2	human	genbank	58_37c	-1	reviewed	missense	c.222	p.E74D	1.000	NULL	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase	-	no_errors
CDKN1B	1027	genome.wustl.edu	37	12	12870900	12870901	+	Frame_Shift_Del	DEL	CG	CG	-	novel	unknown	TCGA-BH-A0W4-01A-11D-A10G-09	TCGA-BH-A0W4-10A-01D-A10G-09	CG	CG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fdafddde-aff1-42b4-bf94-a95861eacf53	7ec51376-daf4-4268-834b-55766654128e	12	12870900	12870901	CG	-	DEL	CDKN1B	NM_004064.3	human	genbank	58_37c	+1	reviewed	frame_shift_del	c.127_128	p.R43fs	0.998:1.000	HMMPfam_CDI	HMMPfam_CDI	-	no_errors
CHCHD6	84303	genome.wustl.edu	37	3	126445927	126445927	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0W4-01A-11D-A10G-09	TCGA-BH-A0W4-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fdafddde-aff1-42b4-bf94-a95861eacf53	7ec51376-daf4-4268-834b-55766654128e	3	126445927	126445927	G	A	SNP	CHCHD6	NM_032343.1	human	genbank	58_37c	+1	provisional	missense	c.94	p.E32K	1.000	HMMPfam_DUF737	HMMPfam_DUF737,HMMPfam_CHCH	-	no_errors
CORO2B	10391	genome.wustl.edu	37	15	69003905	69003905	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A0W4-01A-11D-A10G-09	TCGA-BH-A0W4-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fdafddde-aff1-42b4-bf94-a95861eacf53	7ec51376-daf4-4268-834b-55766654128e	15	69003905	69003905	G	T	SNP	CORO2B	ENST00000261861	human	ensembl	58_37c	+1	known	missense	c.508	p.G170C	1.000	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_DUF1899,HMMPfam_DUF1900,PatternScan_WD_REPEATS_1,HMMPfam_WD40	-	no_errors
CTCF	10664	genome.wustl.edu	37	16	67645919	67645919	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0W4-01A-11D-A10G-09	TCGA-BH-A0W4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fdafddde-aff1-42b4-bf94-a95861eacf53	7ec51376-daf4-4268-834b-55766654128e	16	67645919	67645919	C	T	SNP	CTCF	NM_006565.2	human	genbank	58_37c	+1	reviewed	missense	c.847	p.R283C	1.000	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
DAB2	1601	genome.wustl.edu	37	5	39394418	39394418	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0W4-01A-11D-A10G-09	TCGA-BH-A0W4-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fdafddde-aff1-42b4-bf94-a95861eacf53	7ec51376-daf4-4268-834b-55766654128e	5	39394418	39394418	G	A	SNP	DAB2	NM_001343.2	human	genbank	58_37c	-1	validated	missense	c.5	p.S2F	1.000	NULL	PatternScan_PFKB_KINASES_1,HMMPfam_PID,HMMSmart_SM00462,superfamily_PH domain-like	-	no_errors
EED	8726	genome.wustl.edu	37	11	85977150	85977150	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-BH-A0W4-01A-11D-A10G-09	TCGA-BH-A0W4-10A-01D-A10G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fdafddde-aff1-42b4-bf94-a95861eacf53	7ec51376-daf4-4268-834b-55766654128e	11	85977150	85977150	T	C	SNP	EED	NM_003797.2	human	genbank	58_37c	+1	reviewed	missense	c.752	p.I251T	1.000	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40	HMMSmart_SM00320,superfamily_WD40 repeat-like,PatternScan_WD_REPEATS_1,HMMPfam_WD40	-	no_errors
EFTUD2	9343	genome.wustl.edu	37	17	42964087	42964087	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A0W4-01A-11D-A10G-09	TCGA-BH-A0W4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fdafddde-aff1-42b4-bf94-a95861eacf53	7ec51376-daf4-4268-834b-55766654128e	17	42964087	42964087	C	A	SNP	EFTUD2	NM_004247.3	human	genbank	58_37c	-1	validated	missense	c.137	p.G46V	0.987	NULL	HMMPfam_EFG_C,HMMPfam_GTP_EFTU,PatternScan_EFACTOR_GTP,HMMPfam_GTP_EFTU_D2,HMMPfam_EFG_IV,superfamily_Translat_factor,superfamily_EFG_III_V,superfamily_Ribosomal_S5_D2-typ_fold,superfamily_SSF52540	-	no_errors
GNA15	2769	genome.wustl.edu	37	19	3151786	3151786	+	Silent	SNP	C	C	G	novel	unknown	TCGA-BH-A0W4-01A-11D-A10G-09	TCGA-BH-A0W4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fdafddde-aff1-42b4-bf94-a95861eacf53	7ec51376-daf4-4268-834b-55766654128e	19	3151786	3151786	C	G	SNP	GNA15	NM_002068.2	human	genbank	58_37c	+1	validated	silent	c.567	p.T189	1.000	HMMPfam_G-alpha,superfamily_Transducin (alpha subunit) insertion domain,HMMSmart_SM00275,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_G-alpha,superfamily_Transducin (alpha subunit) insertion domain,HMMSmart_SM00275,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
HLCS	3141	genome.wustl.edu	37	21	38308910	38308910	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0W4-01A-11D-A10G-09	TCGA-BH-A0W4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fdafddde-aff1-42b4-bf94-a95861eacf53	7ec51376-daf4-4268-834b-55766654128e	21	38308910	38308910	C	T	SNP	HLCS	NM_000411.5	human	genbank	58_37c	-1	reviewed	missense	c.835	p.E279K	0.001	NULL	HMMPfam_BPL_C,HMMPfam_BPL_LipA_LipB,superfamily_SSF55681	-	no_errors
IGHV3-6	0	genome.wustl.edu	37	14	106237898	106237898	+	Missense_Mutation	SNP	C	G	G	rs71424552	unknown	TCGA-BH-A0W4-01A-11D-A10G-09	TCGA-BH-A0W4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fdafddde-aff1-42b4-bf94-a95861eacf53	7ec51376-daf4-4268-834b-55766654128e	14	106237898	106237898	C	G	SNP	ENSG00000211894	ENST00000390546	human	ensembl	58_37c	+1	novel	intronic	c.NULL	NULL	0.028	-	-	-	no_errors
ITPR1	3708	genome.wustl.edu	37	3	4726865	4726865	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-BH-A0W4-01A-11D-A10G-09	TCGA-BH-A0W4-10A-01D-A10G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fdafddde-aff1-42b4-bf94-a95861eacf53	7ec51376-daf4-4268-834b-55766654128e	3	4726865	4726865	A	G	SNP	ITPR1	NM_001099952.2	human	genbank	58_37c	+1	reviewed	missense	c.3650	p.E1217G	1.000	HMMPfam_RYDR_ITPR	HMMPfam_RYDR_ITPR,HMMPfam_MIR,superfamily_MIR domain (Pfam 02815),HMMPfam_Ion_trans,HMMPfam_RIH_assoc,HMMPfam_Ins145_P3_rec,HMMSmart_SM00472,superfamily_IP3 receptor type 1 binding core domain 2	-	no_errors
KIAA1033	23325	genome.wustl.edu	37	12	105543489	105543489	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0W4-01A-11D-A10G-09	TCGA-BH-A0W4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fdafddde-aff1-42b4-bf94-a95861eacf53	7ec51376-daf4-4268-834b-55766654128e	12	105543489	105543489	C	T	SNP	KIAA1033	NM_015275.1	human	genbank	58_37c	+1	validated	nonsense	c.2611	p.R871*	1.000	NULL	NULL	-	no_errors
KRTAP4-5	85289	genome.wustl.edu	37	17	39305785	39305785	+	Missense_Mutation	SNP	A	A	T	rs411367	byCluster;byFrequency;by1000genomes;byHapmap	TCGA-BH-A0W4-01A-11D-A10G-09	TCGA-BH-A0W4-10A-01D-A10G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fdafddde-aff1-42b4-bf94-a95861eacf53	7ec51376-daf4-4268-834b-55766654128e	17	39305785	39305785	A	T	SNP	KRTAP4-5	NM_033188.3	human	genbank	58_37c	-1	reviewed	missense	c.235	p.C79S	0.000	PatternScan_TNFR_NGFR_1,HMMPfam_Keratin_B2	PatternScan_TNFR_NGFR_1,HMMPfam_Keratin_B2	-	no_errors
LEPREL1	55214	genome.wustl.edu	37	3	189692391	189692391	+	Missense_Mutation	SNP	C	C	T	rs143768603	byFrequency	TCGA-BH-A0W4-01A-11D-A10G-09	TCGA-BH-A0W4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fdafddde-aff1-42b4-bf94-a95861eacf53	7ec51376-daf4-4268-834b-55766654128e	3	189692391	189692391	C	T	SNP	LEPREL1	NM_018192.3	human	genbank	58_37c	-1	validated	missense	c.1408	p.V470I	0.999	HMMSmart_SM00702	HMMPfam_2OG-FeII_Oxy,HMMSmart_SM00702,superfamily_TPR-like	-	no_errors
LOC283685	0	genome.wustl.edu	37	15	23685275	23685275	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0W4-01A-11D-A10G-09	TCGA-BH-A0W4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fdafddde-aff1-42b4-bf94-a95861eacf53	7ec51376-daf4-4268-834b-55766654128e	15	23685275	23685275	C	T	SNP	LOC283685	XM_002343322.1	human	genbank	58_37c	-1	model	missense	c.1902	p.M634I	0.042	NULL	NULL	-	no_errors
LOC348926	348926	genome.wustl.edu	37	4	3949077	3949077	+	RNA	SNP	T	T	C	rs13116096	byCluster;byFrequency;by1000genomes	TCGA-BH-A0W4-01A-11D-A10G-09	TCGA-BH-A0W4-10A-01D-A10G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fdafddde-aff1-42b4-bf94-a95861eacf53	7ec51376-daf4-4268-834b-55766654128e	4	3949077	3949077	T	C	SNP	LOC348926	NR_024253.1	human	genbank	58_37c	-1	provisional	rna	NULL	NULL	0.000	-	-	-	pseudogene
LOC728064	728064	genome.wustl.edu	37	10	43178874	43178874	+	RNA	SNP	C	C	T	novel	unknown	TCGA-BH-A0W4-01A-11D-A10G-09	TCGA-BH-A0W4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fdafddde-aff1-42b4-bf94-a95861eacf53	7ec51376-daf4-4268-834b-55766654128e	10	43178874	43178874	C	T	SNP	LOC728064	XR_015196.2	human	genbank	58_37c	-1	model	rna	NULL	NULL	0.001	-	-	-	no_errors
MET	4233	genome.wustl.edu	37	7	116371755	116371755	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0W4-01A-11D-A10G-09	TCGA-BH-A0W4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fdafddde-aff1-42b4-bf94-a95861eacf53	7ec51376-daf4-4268-834b-55766654128e	7	116371755	116371755	C	G	SNP	MET	NM_001127500.1	human	genbank	58_37c	+1	reviewed	missense	c.1234	p.R412G	0.601	HMMPfam_Sema,HMMSmart_Sema,superfamily_Sema	HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,HMMPfam_Sema,HMMSmart_Sema,superfamily_Sema,HMMPfam_PSI,HMMPfam_TIG,HMMSmart_IPT,HMMSmart_PSI,PatternScan_PROTEIN_KINASE_TYR,superfamily_Kinase_like,superfamily_Ig_E-set,superfamily_Plexin-like_fold,PatternScan_PROTEIN_KINASE_ATP	-	no_errors
NPY1R	4886	genome.wustl.edu	37	4	164247028	164247028	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-BH-A0W4-01A-11D-A10G-09	TCGA-BH-A0W4-10A-01D-A10G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fdafddde-aff1-42b4-bf94-a95861eacf53	7ec51376-daf4-4268-834b-55766654128e	4	164247028	164247028	T	G	SNP	NPY1R	NM_000909.4	human	genbank	58_37c	-1	validated	missense	c.679	p.I227L	1.000	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
OR7D2	162998	genome.wustl.edu	37	19	9296535	9296535	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0W4-01A-11D-A10G-09	TCGA-BH-A0W4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fdafddde-aff1-42b4-bf94-a95861eacf53	7ec51376-daf4-4268-834b-55766654128e	19	9296535	9296535	C	T	SNP	OR7D2	NM_175883.1	human	genbank	58_37c	+1	provisional	silent	c.78	p.F26	0.000	superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
PCDH15	65217	genome.wustl.edu	37	10	55626527	55626527	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A0W4-01A-11D-A10G-09	TCGA-BH-A0W4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fdafddde-aff1-42b4-bf94-a95861eacf53	7ec51376-daf4-4268-834b-55766654128e	10	55626527	55626527	C	A	SNP	PCDH15	NM_001142763.1	human	genbank	58_37c	-1	reviewed	nonsense	c.3607	p.E1203*	1.000	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like	HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,superfamily_Cadherin-like	-	no_errors
PHLPP1	23239	genome.wustl.edu	37	18	60645818	60645818	+	Silent	SNP	C	C	T	rs62100048	byFrequency;by1000genomes	TCGA-BH-A0W4-01A-11D-A10G-09	TCGA-BH-A0W4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fdafddde-aff1-42b4-bf94-a95861eacf53	7ec51376-daf4-4268-834b-55766654128e	18	60645818	60645818	C	T	SNP	PHLPP1	NM_194449.2	human	genbank	58_37c	+1	validated	silent	c.2772	p.A924	0.001	NULL	HMMPfam_LRR_1,HMMPfam_PH,HMMSmart_SM00332,superfamily_Protein serine/threonine phosphatase 2C catalytic domain,HMMSmart_SM00369,HMMPfam_PP2C,HMMSmart_SM00364,superfamily_L domain-like	-	no_errors
POLE	5426	genome.wustl.edu	37	12	133250202	133250202	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0W4-01A-11D-A10G-09	TCGA-BH-A0W4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fdafddde-aff1-42b4-bf94-a95861eacf53	7ec51376-daf4-4268-834b-55766654128e	12	133250202	133250202	C	T	SNP	POLE	NM_006231.2	human	genbank	58_37c	-1	validated	missense	c.1318	p.D440N	1.000	HMMSmart_POLBc,superfamily_RNaseH_fold	HMMPfam_DNA_pol_B_exo,HMMPfam_DNA_pol_B,HMMSmart_POLBc,superfamily_RNaseH_fold,HMMPfam_DUF1744,superfamily_SSF56672	-	no_errors
PPYR1	5540	genome.wustl.edu	37	10	47087301	47087301	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0W4-01A-11D-A10G-09	TCGA-BH-A0W4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fdafddde-aff1-42b4-bf94-a95861eacf53	7ec51376-daf4-4268-834b-55766654128e	10	47087301	47087301	C	G	SNP	PPYR1	NM_005972.4	human	genbank	58_37c	+1	validated	missense	c.518	p.P173R	1.000	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
PRKAG2	51422	genome.wustl.edu	37	7	151573642	151573642	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0W4-01A-11D-A10G-09	TCGA-BH-A0W4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fdafddde-aff1-42b4-bf94-a95861eacf53	7ec51376-daf4-4268-834b-55766654128e	7	151573642	151573642	C	T	SNP	PRKAG2	NM_016203.3	human	genbank	58_37c	-1	reviewed	missense	c.64	p.G22S	0.997	NULL	HMMPfam_CBS,HMMSmart_SM00116,superfamily_CBS-domain	-	no_errors
TAF1	6872	genome.wustl.edu	37	X	70598836	70598836	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0W4-01A-11D-A10G-09	TCGA-BH-A0W4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fdafddde-aff1-42b4-bf94-a95861eacf53	7ec51376-daf4-4268-834b-55766654128e	X	70598836	70598836	C	T	SNP	TAF1	NM_004606.3	human	genbank	58_37c	+1	reviewed	missense	c.1375	p.P459S	1.000	NULL	HMMPfam_Bromodomain,HMMSmart_BROMO,superfamily_Bromodomain,HMMPfam_TBP-binding,superfamily_TAF_II_230,PatternScan_BROMODOMAIN_1	-	no_errors
TCEB3	6924	genome.wustl.edu	37	1	24077576	24077576	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-BH-A0W4-01A-11D-A10G-09	TCGA-BH-A0W4-10A-01D-A10G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fdafddde-aff1-42b4-bf94-a95861eacf53	7ec51376-daf4-4268-834b-55766654128e	1	24077576	24077576	A	G	SNP	TCEB3	NM_003198.2	human	genbank	58_37c	+1	reviewed	missense	c.559	p.M187V	0.001	NULL	HMMSmart_SM00509,HMMPfam_Elongin_A,HMMPfam_TFIIS,superfamily_Conserved domain common to transcription factors TFIIS elongin A CRSP70	-	no_errors
VCAM1	7412	genome.wustl.edu	37	1	101196752	101196752	+	Splice_Site	SNP	A	A	G	novel	unknown	TCGA-BH-A0W4-01A-11D-A10G-09	TCGA-BH-A0W4-10A-01D-A10G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fdafddde-aff1-42b4-bf94-a95861eacf53	7ec51376-daf4-4268-834b-55766654128e	1	101196752	101196752	A	G	SNP	VCAM1	NM_001078.2	human	genbank	58_37c	+1	reviewed	splice_site	c.1205-2	e6-2	0.991	-	-	-	no_errors
ZNF592	9640	genome.wustl.edu	37	15	85325994	85325994	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-BH-A0W4-01A-11D-A10G-09	TCGA-BH-A0W4-10A-01D-A10G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fdafddde-aff1-42b4-bf94-a95861eacf53	7ec51376-daf4-4268-834b-55766654128e	15	85325994	85325994	A	-	DEL	ZNF592	NM_014630.2	human	genbank	58_37c	+1	validated	frame_shift_del	c.88	p.I30fs	1.000	NULL	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2	-	no_errors
ZRANB1	54764	genome.wustl.edu	37	10	126655277	126655277	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-BH-A0W4-01A-11D-A10G-09	TCGA-BH-A0W4-10A-01D-A10G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fdafddde-aff1-42b4-bf94-a95861eacf53	7ec51376-daf4-4268-834b-55766654128e	10	126655277	126655277	A	T	SNP	ZRANB1	NM_017580.2	human	genbank	58_37c	+1	validated	missense	c.929	p.D310V	1.000	NULL	HMMPfam_zf-RanBP,HMMSmart_ZnF_RBZ,PatternScan_ZF_RANBP2_1,HMMPfam_OTU,superfamily_SSF90209	-	no_errors
