Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ADORA3	140	genome.wustl.edu	37	1	112031583	112031583	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A143-01A-11D-A10Y-09	TCGA-D8-A143-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db1763d1-fcae-4a01-a0cb-3019e292aa10	a8bb9607-a942-4e01-a4e3-faeeff223d0d	1	112031583	112031583	C	T	SNP	ADORA3	NM_020683.6	human	genbank	58_37c	-1	reviewed	missense	c.521	p.C174Y	0.991	HMMPfam_7tm_1,superfamily_SSF48726	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF48726,superfamily_SSF81321	-	no_errors
AKAP4	8852	genome.wustl.edu	37	X	49958079	49958079	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A143-01A-11D-A10Y-09	TCGA-D8-A143-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db1763d1-fcae-4a01-a0cb-3019e292aa10	a8bb9607-a942-4e01-a4e3-faeeff223d0d	X	49958079	49958079	G	A	SNP	AKAP4	NM_003886.2	human	genbank	58_37c	-1	reviewed	missense	c.1285	p.R429C	0.950	HMMPfam_AKAP_110,HMMSmart_SM00807	HMMPfam_AKAP_110,HMMPfam_RII_binding_1,HMMSmart_SM00807	-	no_errors
APOB	338	genome.wustl.edu	37	2	21228741	21228743	+	In_Frame_Del	DEL	CTT	CTT	-	novel	unknown	TCGA-D8-A143-01A-11D-A10Y-09	TCGA-D8-A143-10A-01D-A110-09	CTT	CTT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db1763d1-fcae-4a01-a0cb-3019e292aa10	a8bb9607-a942-4e01-a4e3-faeeff223d0d	2	21228741	21228743	CTT	-	DEL	APOB	NM_000384.2	human	genbank	58_37c	-1	reviewed	in_frame_del	c.10999_10997	p.E3666in_frame_del	1.000:0.999:1.000	NULL	HMMPfam_Vitellogenin_N,HMMSmart_SM00638,HMMPfam_DUF1081,HMMPfam_DUF1943,superfamily_Lipovitellin-phosvitin complex beta-sheet shell regions,superfamily_Lipovitellin-phosvitin complex superhelical domain	-	no_errors
ATP13A1	57130	genome.wustl.edu	37	19	19766177	19766177	+	Silent	SNP	G	G	T	novel	unknown	TCGA-D8-A143-01A-11D-A10Y-09	TCGA-D8-A143-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db1763d1-fcae-4a01-a0cb-3019e292aa10	a8bb9607-a942-4e01-a4e3-faeeff223d0d	19	19766177	19766177	G	T	SNP	ATP13A1	NM_020410.2	human	genbank	58_37c	-1	validated	silent	c.1482	p.P494	1.000	NULL	HMMPfam_Hydrolase,HMMPfam_E1-E2_ATPase,PatternScan_ATPASE_E1_E2,superfamily_HAD-like,superfamily_Calcium ATPase transduction domain A,superfamily_Metal cation-transporting ATPase ATP-binding domain N	-	no_errors
BICC1	80114	genome.wustl.edu	37	10	60560727	60560727	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-D8-A143-01A-11D-A10Y-09	TCGA-D8-A143-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db1763d1-fcae-4a01-a0cb-3019e292aa10	a8bb9607-a942-4e01-a4e3-faeeff223d0d	10	60560727	60560727	A	T	SNP	BICC1	NM_001080512.1	human	genbank	58_37c	+1	reviewed	missense	c.1936	p.M646L	1.000	NULL	HMMPfam_SAM_1,HMMSmart_SM00454,HMMSmart_SM00322,superfamily_SAM/Pointed domain,HMMPfam_KH_1,superfamily_Eukaryotic type KH-domain (KH-domain type I)	-	no_errors
BMP2K	55589	genome.wustl.edu	37	4	79832817	79832817	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D8-A143-01A-11D-A10Y-09	TCGA-D8-A143-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db1763d1-fcae-4a01-a0cb-3019e292aa10	a8bb9607-a942-4e01-a4e3-faeeff223d0d	4	79832817	79832817	C	A	SNP	BMP2K	NM_198892.1	human	genbank	58_37c	+1	reviewed	nonsense	c.3116	p.S1039*	1.000	NULL	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase	-	no_errors
BMS1	9790	genome.wustl.edu	37	10	43326387	43326387	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-D8-A143-01A-11D-A10Y-09	TCGA-D8-A143-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db1763d1-fcae-4a01-a0cb-3019e292aa10	a8bb9607-a942-4e01-a4e3-faeeff223d0d	10	43326387	43326387	T	A	SNP	BMS1	NM_014753.3	human	genbank	58_37c	+1	reviewed	missense	c.3692	p.L1231Q	0.956	NULL	HMMPfam_DUF663,HMMPfam_AARP2CN,HMMSmart_SM00785,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
C17orf64	124773	genome.wustl.edu	37	17	58503620	58503620	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-D8-A143-01A-11D-A10Y-09	TCGA-D8-A143-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db1763d1-fcae-4a01-a0cb-3019e292aa10	a8bb9607-a942-4e01-a4e3-faeeff223d0d	17	58503620	58503620	C	A	SNP	C17orf64	NM_181707.2	human	genbank	58_37c	+1	validated	missense	c.252	p.S84R	1.000	NULL	NULL	-	no_errors
C1orf114	57821	genome.wustl.edu	37	1	169364427	169364427	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A143-01A-11D-A10Y-09	TCGA-D8-A143-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db1763d1-fcae-4a01-a0cb-3019e292aa10	a8bb9607-a942-4e01-a4e3-faeeff223d0d	1	169364427	169364427	C	T	SNP	C1orf114	NM_021179.1	human	genbank	58_37c	-1	predicted	missense	c.1385	p.R462Q	0.891	NULL	NULL	-	no_errors
C3orf52	79669	genome.wustl.edu	37	3	111831902	111831902	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D8-A143-01A-11D-A10Y-09	TCGA-D8-A143-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db1763d1-fcae-4a01-a0cb-3019e292aa10	a8bb9607-a942-4e01-a4e3-faeeff223d0d	3	111831902	111831902	G	T	SNP	C3orf52	NM_024616.2	human	genbank	58_37c	+1	validated	missense	c.559	p.V187L	1.000	NULL	NULL	-	no_errors
CALB2	794	genome.wustl.edu	37	16	71408680	71408682	+	In_Frame_Del	DEL	GAA	GAA	-	novel	unknown	TCGA-D8-A143-01A-11D-A10Y-09	TCGA-D8-A143-10A-01D-A110-09	GAA	GAA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db1763d1-fcae-4a01-a0cb-3019e292aa10	a8bb9607-a942-4e01-a4e3-faeeff223d0d	16	71408680	71408682	GAA	-	DEL	CALB2	NM_001740.3	human	genbank	58_37c	+1	reviewed	in_frame_del	c.204_206	p.K69in_frame_del	1.000:1.000:1.000	HMMSmart_EFh,HMMPfam_efhand,superfamily_SSF47473	HMMSmart_EFh,PatternScan_EF_HAND_1,HMMPfam_efhand,superfamily_SSF47473	-	no_errors
CAP1	10487	genome.wustl.edu	37	1	40530205	40530205	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-D8-A143-01A-11D-A10Y-09	TCGA-D8-A143-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db1763d1-fcae-4a01-a0cb-3019e292aa10	a8bb9607-a942-4e01-a4e3-faeeff223d0d	1	40530205	40530205	C	G	SNP	CAP1	NM_001105530.1	human	genbank	58_37c	+1	reviewed	missense	c.498	p.N166K	1.000	HMMPfam_CAP_N,superfamily_N-terminal domain of adenylylcyclase associated protein CAP	HMMSmart_SM00673,HMMPfam_CAP_C,superfamily_C-terminal domain of adenylylcyclase associated protein,HMMPfam_CAP_N,superfamily_N-terminal domain of adenylylcyclase associated protein CAP,PatternScan_CAP_1,PatternScan_CAP_2	-	no_errors
DSCAM	1826	genome.wustl.edu	37	21	41559154	41559154	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-D8-A143-01A-11D-A10Y-09	TCGA-D8-A143-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db1763d1-fcae-4a01-a0cb-3019e292aa10	a8bb9607-a942-4e01-a4e3-faeeff223d0d	21	41559154	41559154	C	G	SNP	DSCAM	NM_001389.3	human	genbank	58_37c	-1	validated	missense	c.2683	p.D895H	1.000	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III	HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,HMMPfam_I-set,HMMPfam_ig,superfamily_Immunoglobulin	-	no_errors
FAM40A	85369	genome.wustl.edu	37	1	110590491	110590492	+	Frame_Shift_Ins	INS	-	-	GTGA	novel	unknown	TCGA-D8-A143-01A-11D-A10Y-09	TCGA-D8-A143-10A-01D-A110-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db1763d1-fcae-4a01-a0cb-3019e292aa10	a8bb9607-a942-4e01-a4e3-faeeff223d0d	1	110590491	110590492	-	GTGA	INS	FAM40A	NM_033088.2	human	genbank	58_37c	+1	validated	frame_shift_ins	c.1661_1662	p.T555fs	1.000:1.000	NULL	HMMPfam_N1221	-	no_errors
FDXR	2232	genome.wustl.edu	37	17	72860220	72860220	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D8-A143-01A-11D-A10Y-09	TCGA-D8-A143-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db1763d1-fcae-4a01-a0cb-3019e292aa10	a8bb9607-a942-4e01-a4e3-faeeff223d0d	17	72860220	72860220	G	C	SNP	FDXR	ENST00000455107	human	ensembl	58_37c	-1	known	missense	c.920	p.P307R	0.000	NULL	superfamily_FAD/NAD(P)-binding domain	-	no_errors
FGD5	152273	genome.wustl.edu	37	3	14860967	14860967	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A143-01A-11D-A10Y-09	TCGA-D8-A143-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db1763d1-fcae-4a01-a0cb-3019e292aa10	a8bb9607-a942-4e01-a4e3-faeeff223d0d	3	14860967	14860967	C	T	SNP	FGD5	NM_152536.3	human	genbank	58_37c	+1	validated	missense	c.389	p.A130V	0.000	NULL	HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_DBL homology domain (DH-domain),HMMPfam_FYVE,HMMSmart_SM00064,HMMPfam_PH,HMMSmart_SM00233,superfamily_FYVE/PHD zinc finger,PatternScan_C_TYPE_LECTIN_1,superfamily_PH domain-like	-	no_errors
GPR133	283383	genome.wustl.edu	37	12	131488811	131488811	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A143-01A-11D-A10Y-09	TCGA-D8-A143-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db1763d1-fcae-4a01-a0cb-3019e292aa10	a8bb9607-a942-4e01-a4e3-faeeff223d0d	12	131488811	131488811	C	T	SNP	GPR133	NM_198827.3	human	genbank	58_37c	+1	validated	nonsense	c.1225	p.Q409*	0.106	NULL	HMMPfam_GPS,HMMSmart_SM00303,HMMPfam_7tm_2,superfamily_Concanavalin A-like lectins/glucanases,PatternScan_G_PROTEIN_RECEP_F2_2	-	no_errors
IREB2	3658	genome.wustl.edu	37	15	78768612	78768612	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-D8-A143-01A-11D-A10Y-09	TCGA-D8-A143-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db1763d1-fcae-4a01-a0cb-3019e292aa10	a8bb9607-a942-4e01-a4e3-faeeff223d0d	15	78768612	78768612	C	G	SNP	IREB2	NM_004136.2	human	genbank	58_37c	+1	validated	missense	c.1106	p.T369S	1.000	HMMPfam_Aconitase,superfamily_Aconitase iron-sulfur domain	HMMPfam_Aconitase_C,HMMPfam_Aconitase,superfamily_Aconitase iron-sulfur domain,superfamily_Aconitase,PatternScan_ACONITASE_1,PatternScan_ACONITASE_2	-	no_errors
KIF26B	55083	genome.wustl.edu	37	1	245772787	245772787	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A143-01A-11D-A10Y-09	TCGA-D8-A143-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db1763d1-fcae-4a01-a0cb-3019e292aa10	a8bb9607-a942-4e01-a4e3-faeeff223d0d	1	245772787	245772787	C	T	SNP	KIF26B	NM_018012.3	human	genbank	58_37c	+1	provisional	missense	c.1871	p.S624F	1.000	HMMPfam_Kinesin,HMMSmart_SM00129,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_Kinesin,HMMSmart_SM00129,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
LOC100289119	0	genome.wustl.edu	37	19	36297501	36297501	+	Silent	SNP	A	A	G	novel	unknown	TCGA-D8-A143-01A-11D-A10Y-09	TCGA-D8-A143-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db1763d1-fcae-4a01-a0cb-3019e292aa10	a8bb9607-a942-4e01-a4e3-faeeff223d0d	19	36297501	36297501	A	G	SNP	LOC100289119	XM_002343676.1	human	genbank	58_37c	+1	model	silent	c.597	p.L199	0.746	NULL	NULL	-	no_errors
LOC729866	729866	genome.wustl.edu	37	1	157894853	157894853	+	RNA	SNP	G	G	A	novel	unknown	TCGA-D8-A143-01A-11D-A10Y-09	TCGA-D8-A143-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db1763d1-fcae-4a01-a0cb-3019e292aa10	a8bb9607-a942-4e01-a4e3-faeeff223d0d	1	157894853	157894853	G	A	SNP	LOC729866	XR_078238.1	human	genbank	58_37c	-1	model	rna	NULL	NULL	0.016	-	-	-	no_errors
LRP1B	53353	genome.wustl.edu	37	2	141130589	141130589	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-D8-A143-01A-11D-A10Y-09	TCGA-D8-A143-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db1763d1-fcae-4a01-a0cb-3019e292aa10	a8bb9607-a942-4e01-a4e3-faeeff223d0d	2	141130589	141130589	T	G	SNP	LRP1B	NM_018557.2	human	genbank	58_37c	-1	validated	missense	c.10756	p.S3586R	1.000	HMMPfam_Ldl_recept_a,HMMSmart_LDLa,PatternScan_LDLRA_1,superfamily_LDL_rcpt_classA_cys-rich	HMMPfam_Ldl_recept_b,HMMSmart_LY,PatternScan_ASX_HYDROXYL,HMMPfam_NHL,HMMSmart_EGF_CA,HMMPfam_Ldl_recept_a,HMMSmart_LDLa,PatternScan_LDLRA_1,superfamily_LDL_rcpt_classA_cys-rich,HMMPfam_EGF,HMMSmart_EGF,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF_CA,HMMPfam_EGF_2,PatternScan_EGF_CA,superfamily_SSF57196,superfamily_SSF63825	-	no_errors
MAST1	22983	genome.wustl.edu	37	19	12980054	12980054	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D8-A143-01A-11D-A10Y-09	TCGA-D8-A143-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db1763d1-fcae-4a01-a0cb-3019e292aa10	a8bb9607-a942-4e01-a4e3-faeeff223d0d	19	12980054	12980054	C	A	SNP	MAST1	NM_014975.2	human	genbank	58_37c	+1	validated	missense	c.2948	p.A983D	1.000	HMMSmart_PDZ,superfamily_PDZ	HMMSmart_S_TK_X,HMMPfam_PDZ,HMMSmart_PDZ,superfamily_PDZ,HMMSmart_S_TKc,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,HMMPfam_DUF1908,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,HMMPfam_Pkinase_C	-	no_errors
MUC12	10071	genome.wustl.edu	37	7	100642025	100642026	+	Frame_Shift_Del	DEL	CA	CA	-	novel	unknown	TCGA-D8-A143-01A-11D-A10Y-09	TCGA-D8-A143-10A-01D-A110-09	CA	CA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db1763d1-fcae-4a01-a0cb-3019e292aa10	a8bb9607-a942-4e01-a4e3-faeeff223d0d	7	100642025	100642026	CA	-	DEL	MUC12	ENST00000379442	human	ensembl	58_37c	+1	known	frame_shift_del	c.8610_8611	p.T2871fs	0.001:0.002	NULL	HMMPfam_SEA,HMMSmart_SEA,PatternScan_EGF_1,PatternScan_EGF_2	-	no_errors
MYH13	8735	genome.wustl.edu	37	17	10219317	10219317	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-D8-A143-01A-11D-A10Y-09	TCGA-D8-A143-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db1763d1-fcae-4a01-a0cb-3019e292aa10	a8bb9607-a942-4e01-a4e3-faeeff223d0d	17	10219317	10219317	G	A	SNP	MYH13	NM_003802.2	human	genbank	58_37c	-1	validated	missense	c.3764	p.T1255M	0.739	HMMPfam_Myosin_tail_1,superfamily_Prefoldin	HMMPfam_Myosin_head,HMMSmart_SM00242,HMMPfam_Myosin_tail_1,HMMPfam_Myosin_N,superfamily_Prefoldin,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
MYH7B	57644	genome.wustl.edu	37	20	33577577	33577577	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D8-A143-01A-11D-A10Y-09	TCGA-D8-A143-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db1763d1-fcae-4a01-a0cb-3019e292aa10	a8bb9607-a942-4e01-a4e3-faeeff223d0d	20	33577577	33577577	G	T	SNP	MYH7B	NM_020884.3	human	genbank	58_37c	+1	reviewed	missense	c.1748	p.C583F	1.000	HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases	PatternScan_THIOL_PROTEASE_HIS,HMMPfam_Myosin_head,HMMSmart_SM00242,HMMPfam_Myosin_tail_1,HMMPfam_Myosin_N,superfamily_Prefoldin,superfamily_tRNA-binding arm,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
NAA15	0	genome.wustl.edu	37	4	140280938	140280938	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D8-A143-01A-11D-A10Y-09	TCGA-D8-A143-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db1763d1-fcae-4a01-a0cb-3019e292aa10	a8bb9607-a942-4e01-a4e3-faeeff223d0d	4	140280938	140280938	G	A	SNP	NAA15	NM_057175.3	human	genbank	58_37c	+1	validated	silent	c.1299	p.E433	0.997	HMMSmart_SM00028,superfamily_TPR-like	HMMPfam_TPR_2,HMMSmart_SM00028,superfamily_TPR-like	-	no_errors
OBSCN	84033	genome.wustl.edu	37	1	228556454	228556454	+	Missense_Mutation	SNP	G	G	T	rs185398730	by1000genomes	TCGA-D8-A143-01A-11D-A10Y-09	TCGA-D8-A143-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db1763d1-fcae-4a01-a0cb-3019e292aa10	a8bb9607-a942-4e01-a4e3-faeeff223d0d	1	228556454	228556454	G	T	SNP	OBSCN	NM_001098623.1	human	genbank	58_37c	+1	reviewed	missense	c.19799	p.R6600L	0.987	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase	HMMPfam_IQ,HMMSmart_SM00015,HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_DBL homology domain (DH-domain),HMMSmart_SM00219,HMMPfam_PH,HMMSmart_SM00233,HMMSmart_SM00220,HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,PatternScan_PROTEIN_KINASE_TYR,PatternScan_PROTEIN_KINASE_ST,superfamily_Fibronectin type III,superfamily_Protein kinase-like (PK-like),HMMPfam_I-set,HMMPfam_V-set,HMMPfam_ig,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,PatternScan_GLYCOSYL_HYDROL_F5,superfamily_Immunoglobulin,superfamily_PH domain-like	-	no_errors
OR2AG2	338755	genome.wustl.edu	37	11	6789772	6789772	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-D8-A143-01A-11D-A10Y-09	TCGA-D8-A143-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db1763d1-fcae-4a01-a0cb-3019e292aa10	a8bb9607-a942-4e01-a4e3-faeeff223d0d	11	6789772	6789772	T	A	SNP	OR2AG2	NM_001004490.1	human	genbank	58_37c	-1	provisional	missense	c.417	p.R139S	0.004	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
PCDHA13	56136	genome.wustl.edu	37	5	140263636	140263636	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A143-01A-11D-A10Y-09	TCGA-D8-A143-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db1763d1-fcae-4a01-a0cb-3019e292aa10	a8bb9607-a942-4e01-a4e3-faeeff223d0d	5	140263636	140263636	C	T	SNP	PCDHA13	NM_018904.2	human	genbank	58_37c	+1	reviewed	missense	c.1783	p.R595C	0.193	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like	HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin_2,superfamily_Cadherin-like	-	no_errors
PHF16	9767	genome.wustl.edu	37	X	46887478	46887478	+	Silent	SNP	T	T	C	novel	unknown	TCGA-D8-A143-01A-11D-A10Y-09	TCGA-D8-A143-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db1763d1-fcae-4a01-a0cb-3019e292aa10	a8bb9607-a942-4e01-a4e3-faeeff223d0d	X	46887478	46887478	T	C	SNP	PHF16	NM_001077445.1	human	genbank	58_37c	+1	reviewed	silent	c.660	p.C220	1.000	HMMSmart_PHD,superfamily_FYVE_PHD_ZnF,PatternScan_ZF_PHD_1,HMMPfam_PHD	HMMSmart_PHD,superfamily_FYVE_PHD_ZnF,HMMPfam_EPL1,PatternScan_ZF_PHD_1,HMMPfam_PHD	-	no_errors
PIK3CA	0	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	A	G			TCGA-D8-A143-01A-11D-A10Y-09	TCGA-D8-A143-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db1763d1-fcae-4a01-a0cb-3019e292aa10	a8bb9607-a942-4e01-a4e3-faeeff223d0d	3	178952085	178952085	A	G	SNP	PIK3CA	NM_006218.2	human	genbank	58_37c	+1	reviewed	missense	c.3140	p.H1047R	1.000	HMMSmart_PI3Kc,superfamily_Kinase_like	HMMSmart_C2,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,HMMPfam_PI3Ka,HMMSmart_PI3Ka,HMMPfam_PI3K_C2,HMMSmart_PI3K_C2,HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_C2_CaLB,superfamily_Kinase_like,superfamily_ARM-type_fold,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2,superfamily_SSF54236	-	no_errors
PRG4	10216	genome.wustl.edu	37	1	186277245	186277245	+	Silent	SNP	C	C	A	novel	unknown	TCGA-D8-A143-01A-11D-A10Y-09	TCGA-D8-A143-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db1763d1-fcae-4a01-a0cb-3019e292aa10	a8bb9607-a942-4e01-a4e3-faeeff223d0d	1	186277245	186277245	C	A	SNP	PRG4	NM_005807.3	human	genbank	58_37c	+1	reviewed	silent	c.2394	p.A798	0.093	NULL	superfamily_Hemopexin-like domain,HMMPfam_Somatomedin_B,HMMSmart_SM00201,PatternScan_SMB_1,PatternScan_HEMOPEXIN,HMMPfam_Hemopexin,HMMSmart_SM00120,superfamily_Somatomedin B domain	-	no_errors
PRX	57716	genome.wustl.edu	37	19	40901124	40901124	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D8-A143-01A-11D-A10Y-09	TCGA-D8-A143-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db1763d1-fcae-4a01-a0cb-3019e292aa10	a8bb9607-a942-4e01-a4e3-faeeff223d0d	19	40901124	40901124	C	A	SNP	PRX	NM_181882.2	human	genbank	58_37c	-1	reviewed	missense	c.3135	p.L1045F	0.310	NULL	HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like	-	no_errors
RB1	5925	genome.wustl.edu	37	13	49033889	49033890	+	Frame_Shift_Ins	INS	-	-	TAGAACA	novel	unknown	TCGA-D8-A143-01A-11D-A10Y-09	TCGA-D8-A143-10A-01D-A110-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db1763d1-fcae-4a01-a0cb-3019e292aa10	a8bb9607-a942-4e01-a4e3-faeeff223d0d	13	49033889	49033890	-	TAGAACA	INS	RB1	NM_000321.2	human	genbank	58_37c	+1	reviewed	frame_shift_ins	c.2026_2027	p.I679fs	1.000:1.000	HMMPfam_RB_B,HMMSmart_SM00385,superfamily_Cyclin-like	HMMPfam_RB_B,HMMPfam_RB_A,HMMSmart_SM00385,superfamily_Cyclin-like,HMMPfam_Rb_C	-	no_errors
RGSL1	353299	genome.wustl.edu	37	1	182517904	182517904	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A143-01A-11D-A10Y-09	TCGA-D8-A143-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db1763d1-fcae-4a01-a0cb-3019e292aa10	a8bb9607-a942-4e01-a4e3-faeeff223d0d	1	182517904	182517904	G	A	SNP	RGSL1	NM_001137669.1	human	genbank	58_37c	+1	validated	missense	c.2878	p.V960I	0.043	superfamily_Regulator of G-protein signaling RGS	superfamily_Regulator of G-protein signaling RGS	-	no_errors
SARS2	54938	genome.wustl.edu	37	19	39421129	39421129	+	Missense_Mutation	SNP	G	G	A	rs34050897	byCluster;byFrequency;by1000genomes	TCGA-D8-A143-01A-11D-A10Y-09	TCGA-D8-A143-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db1763d1-fcae-4a01-a0cb-3019e292aa10	a8bb9607-a942-4e01-a4e3-faeeff223d0d	19	39421129	39421129	G	A	SNP	SARS2	NM_017827.3	human	genbank	58_37c	-1	reviewed	missense	c.248	p.S83L	0.160	superfamily_tRNA_binding_arm,HMMPfam_Seryl_tRNA_N	HMMPfam_tRNA-synt_2b,superfamily_tRNA_binding_arm,HMMPfam_Seryl_tRNA_N,superfamily_SSF55681	-	no_errors
THSD7A	221981	genome.wustl.edu	37	7	11464427	11464427	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D8-A143-01A-11D-A10Y-09	TCGA-D8-A143-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db1763d1-fcae-4a01-a0cb-3019e292aa10	a8bb9607-a942-4e01-a4e3-faeeff223d0d	7	11464427	11464427	G	T	SNP	THSD7A	NM_015204.2	human	genbank	58_37c	-1	validated	missense	c.3279	p.D1093E	1.000	HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat	HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat	-	no_errors
TINAG	27283	genome.wustl.edu	37	6	54214608	54214608	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A143-01A-11D-A10Y-09	TCGA-D8-A143-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db1763d1-fcae-4a01-a0cb-3019e292aa10	a8bb9607-a942-4e01-a4e3-faeeff223d0d	6	54214608	54214608	C	T	SNP	TINAG	NM_014464.3	human	genbank	58_37c	+1	validated	missense	c.994	p.R332W	1.000	HMMPfam_Peptidase_C1,HMMSmart_SM00645,superfamily_Cysteine proteinases	PatternScan_THIOL_PROTEASE_ASN,HMMPfam_Peptidase_C1,HMMSmart_SM00645,HMMSmart_SM00201,PatternScan_SMB_1,superfamily_Cysteine proteinases	-	no_errors
TP53	7157	genome.wustl.edu	37	17	7576851	7576851	+	Splice_Site	SNP	A	C	C	novel	unknown	TCGA-D8-A143-01A-11D-A10Y-09	TCGA-D8-A143-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db1763d1-fcae-4a01-a0cb-3019e292aa10	a8bb9607-a942-4e01-a4e3-faeeff223d0d	17	7576851	7576851	A	C	SNP	TP53	NM_000546.4	human	genbank	58_37c	-1	reviewed	splice_site	c.993+2	e8+2	1.000	-	-	-	no_errors
TTC18	118491	genome.wustl.edu	37	10	75114545	75114545	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-D8-A143-01A-11D-A10Y-09	TCGA-D8-A143-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db1763d1-fcae-4a01-a0cb-3019e292aa10	a8bb9607-a942-4e01-a4e3-faeeff223d0d	10	75114545	75114545	C	G	SNP	TTC18	NM_145170.3	human	genbank	58_37c	-1	validated	missense	c.10	p.V4L	0.003	NULL	HMMPfam_TPR_1,HMMSmart_SM00028,superfamily_TPR-like	-	no_errors
UBC	7316	genome.wustl.edu	37	12	125397945	125397945	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D8-A143-01A-11D-A10Y-09	TCGA-D8-A143-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db1763d1-fcae-4a01-a0cb-3019e292aa10	a8bb9607-a942-4e01-a4e3-faeeff223d0d	12	125397945	125397945	G	C	SNP	UBC	NM_021009.4	human	genbank	58_37c	-1	validated	missense	c.373	p.Q125E	1.000	HMMPfam_ubiquitin,HMMSmart_SM00213,PatternScan_UBIQUITIN_1,superfamily_Ubiquitin-like	HMMPfam_ubiquitin,HMMSmart_SM00213,PatternScan_UBIQUITIN_1,superfamily_Ubiquitin-like	-	no_errors
USP27X	389856	genome.wustl.edu	37	X	49645348	49645348	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-D8-A143-01A-11D-A10Y-09	TCGA-D8-A143-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db1763d1-fcae-4a01-a0cb-3019e292aa10	a8bb9607-a942-4e01-a4e3-faeeff223d0d	X	49645348	49645348	A	T	SNP	USP27X	NM_001145073.1	human	genbank	58_37c	+1	provisional	missense	c.438	p.L146F	0.998	HMMPfam_UCH,superfamily_SSF54001	HMMPfam_UCH,PatternScan_UCH_2_1,PatternScan_UCH_2_2,superfamily_SSF54001	-	no_errors
ZC3H4	23211	genome.wustl.edu	37	19	47570199	47570199	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A143-01A-11D-A10Y-09	TCGA-D8-A143-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db1763d1-fcae-4a01-a0cb-3019e292aa10	a8bb9607-a942-4e01-a4e3-faeeff223d0d	19	47570199	47570199	G	A	SNP	ZC3H4	NM_015168.1	human	genbank	58_37c	-1	validated	missense	c.3326	p.P1109L	0.932	NULL	HMMPfam_zf-CCCH,HMMSmart_ZnF_C3H1	-	no_errors
ZNF841	284371	genome.wustl.edu	37	19	52569631	52569631	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A143-01A-11D-A10Y-09	TCGA-D8-A143-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db1763d1-fcae-4a01-a0cb-3019e292aa10	a8bb9607-a942-4e01-a4e3-faeeff223d0d	19	52569631	52569631	C	T	SNP	ZNF841	NM_001136499.1	human	genbank	58_37c	-1	validated	missense	c.1504	p.V502M	0.000	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box,PatternScan_IG_MHC,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
