Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ABCA13	0	genome.wustl.edu	37	7	48314170	48314170	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	7	48314170	48314170	G	C	SNP	ABCA13	NM_152701.3	human	genbank	58_37c	+1	reviewed	missense	c.4907	p.R1636T	0.341	NULL	HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
ACACB	0	genome.wustl.edu	37	12	109654462	109654462	+	Silent	SNP	G	G	T	novel	unknown	TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	12	109654462	109654462	G	T	SNP	ACACB	NM_001093.3	human	genbank	58_37c	+1	reviewed	silent	c.3390	p.V1130	0.985	HMMPfam_ACC_central	HMMPfam_Carboxyl_trans,HMMPfam_Biotin_lipoyl,HMMPfam_CPSase_L_D2,PatternScan_CPSASE_1,PatternScan_CPSASE_2,HMMPfam_CPSase_L_chain,HMMPfam_Biotin_carb_C,superfamily_Single hybrid motif,superfamily_Rudiment single hybrid motif,HMMPfam_ACC_central,superfamily_PreATP-grasp domain,superfamily_ClpP/crotonase,superfamily_Glutathione synthetase ATP-binding domain-like	-	no_errors
ACAD11	0	genome.wustl.edu	37	3	132277850	132277850	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	3	132277850	132277850	G	A	SNP	ACAD11	NM_032169.4	human	genbank	58_37c	-1	validated	missense	c.2308	p.R770W	0.037	superfamily_Acyl-CoA dehydrogenase C-terminal domain-like	HMMPfam_APH,HMMPfam_Acyl-CoA_dh_1,HMMPfam_Acyl-CoA_dh_M,HMMPfam_Acyl-CoA_dh_N,PatternScan_PROTEIN_KINASE_TYR,superfamily_Acyl-CoA dehydrogenase C-terminal domain-like,superfamily_Acyl-CoA dehydrogenase NM domain-like,superfamily_Protein kinase-like (PK-like)	-	no_errors
ANK2	0	genome.wustl.edu	37	4	114203939	114203939	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	4	114203939	114203939	A	C	SNP	ANK2	NM_001148.4	human	genbank	58_37c	+1	reviewed	missense	c.1990	p.T664P	0.363	HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK	HMMPfam_Death,HMMSmart_DEATH,HMMPfam_ZU5,HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK,superfamily_DEATH_like,PatternScan_ALDEHYDE_DEHYDR_GLU	-	no_errors
AOAH	0	genome.wustl.edu	37	7	36552787	36552788	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	7	36552787	36552788	-	G	INS	AOAH	ENST00000431169	human	ensembl	58_37c	-1	known	frame_shift_ins	c.1918_1917	p.Y639fs	0.000:0.000	NULL	HMMPfam_Lipase_GDSL,HMMPfam_SapB_2,HMMSmart_SM00741,superfamily_Saposin,PatternScan_EGF_1	-	no_errors
ARRDC3	0	genome.wustl.edu	37	5	90670780	90670780	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	5	90670780	90670780	T	C	SNP	ARRDC3	NM_020801.2	human	genbank	58_37c	-1	validated	missense	c.829	p.I277V	1.000	HMMPfam_Arrestin_C,superfamily_Ig_E-set	HMMPfam_Arrestin_N,HMMPfam_Arrestin_C,superfamily_Ig_E-set	-	no_errors
BTF3L4	0	genome.wustl.edu	37	1	52530570	52530571	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	1	52530570	52530571	-	A	INS	BTF3L4	NM_152265.3	human	genbank	58_37c	+1	validated	frame_shift_ins	c.128_129	p.L46fs	0.999:0.252	HMMPfam_NAC	HMMPfam_NAC	-	no_errors
C12orf35	0	genome.wustl.edu	37	12	32137328	32137328	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	12	32137328	32137328	T	C	SNP	C12orf35	NM_018169.3	human	genbank	58_37c	+1	validated	missense	c.3439	p.C1147R	0.000	NULL	NULL	-	no_errors
C1orf161	0	genome.wustl.edu	37	1	116663694	116663694	+	Splice_Site	SNP	G	G	T	novel	unknown	TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	1	116663694	116663694	G	T	SNP	C1orf161	NM_152367.2	human	genbank	58_37c	+1	validated	splice_site	c.189+1	e2+1	1.000	-	-	-	no_errors
C7orf26	0	genome.wustl.edu	37	7	6634119	6634119	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	7	6634119	6634119	C	A	SNP	C7orf26	NM_024067.2	human	genbank	58_37c	+1	predicted	nonsense	c.468	p.Y156*	1.000	NULL	NULL	-	no_errors
CARM1	0	genome.wustl.edu	37	19	11027383	11027383	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	19	11027383	11027383	C	T	SNP	CARM1	NM_199141.1	human	genbank	58_37c	+1	validated	missense	c.950	p.S317F	1.000	superfamily_SSF53335	HMMPfam_PrmA,superfamily_SSF53335	-	no_errors
CCDC73	0	genome.wustl.edu	37	11	32675581	32675581	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	11	32675581	32675581	T	G	SNP	CCDC73	NM_001008391.2	human	genbank	58_37c	-1	validated	missense	c.777	p.E259D	0.987	NULL	NULL	-	no_errors
CKMT2	0	genome.wustl.edu	37	5	80553653	80553653	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	5	80553653	80553653	G	A	SNP	CKMT2	NM_001099735.1	human	genbank	58_37c	+1	reviewed	missense	c.857	p.R286Q	1.000	HMMPfam_ATP-gua_Ptrans,superfamily_SSF55931	HMMPfam_ATP-gua_Ptrans,HMMPfam_ATP-gua_PtransN,PatternScan_GUANIDO_KINASE,superfamily_ATP-gua_Ptrans,superfamily_SSF55931	-	no_errors
DCHS1	0	genome.wustl.edu	37	11	6662745	6662746	+	In_Frame_Ins	INS	-	-	CAG	novel	unknown	TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	11	6662745	6662746	-	CAG	INS	DCHS1	NM_003737.2	human	genbank	58_37c	-1	reviewed	in_frame_ins	c.100_99	p.33in_frame_insL	1.000:1.000	NULL	HMMPfam_Cadherin,HMMSmart_CA,PatternScan_CADHERIN_1,superfamily_Cadherin	-	no_errors
DHX30	0	genome.wustl.edu	37	3	47882665	47882665	+	Nonsense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	3	47882665	47882665	C	G	SNP	DHX30	NM_138615.2	human	genbank	58_37c	+1	reviewed	nonsense	c.665	p.S222*	0.972	NULL	HMMPfam_Helicase_C,HMMSmart_SM00490,PatternScan_DEAH_ATP_HELICASE,HMMPfam_HA2,HMMPfam_DUF1605,HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases,superfamily_dsRNA-binding domain-like	-	no_errors
ENSG00000198804	0	genome.wustl.edu	37	MT	6951	6951	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	MT	6951	6951	G	A	SNP	ENSG00000198804	ENST00000361624	human	ensembl	58_37c	+1	known	missense	c.1048	p.V350M	NULL	HMMPfam_COX1,superfamily_Cytochrome c oxidase subunit I-like	HMMPfam_COX1,PatternScan_COX1_CUB,superfamily_Cytochrome c oxidase subunit I-like	-	mismatch_between_exon_seq_and_reference
ENSG00000198899	0	genome.wustl.edu	37	MT	9047	9047	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	MT	9047	9047	T	C	SNP	ENSG00000198899	ENST00000361899	human	ensembl	58_37c	+1	known	missense	c.521	p.I174T	NULL	HMMPfam_ATP-synt_A,superfamily_F1F0 ATP synthase subunit A	HMMPfam_ATP-synt_A,PatternScan_ATPASE_A,superfamily_F1F0 ATP synthase subunit A	-	mismatch_between_exon_seq_and_reference
FRG1	0	genome.wustl.edu	37	4	190878608	190878608	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	4	190878608	190878608	G	A	SNP	FRG1	NM_004477.2	human	genbank	58_37c	+1	reviewed	missense	c.488	p.G163E	1.000	superfamily_Actin-crosslinking proteins,HMMPfam_FRG1	PatternScan_LIPOCALIN,superfamily_Actin-crosslinking proteins,HMMPfam_FRG1	-	no_errors
FRG1B	0	genome.wustl.edu	37	20	29625971	29625971	+	Missense_Mutation	SNP	C	C	A	rs145033899	unknown	TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	20	29625971	29625971	C	A	SNP	FRG1B	ENST00000278882	human	ensembl	58_37c	+1	known	missense	c.215	p.P72Q	1.000	superfamily_Actin_crosslink,HMMPfam_FRG1	superfamily_Actin_crosslink,HMMPfam_FRG1	-	no_errors
FSTL5	0	genome.wustl.edu	37	4	162680584	162680584	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	4	162680584	162680584	C	T	SNP	FSTL5	NM_020116.3	human	genbank	58_37c	-1	validated	missense	c.706	p.E236K	1.000	PatternScan_EF_HAND_1,superfamily_SSF47473	HMMPfam_Kazal_1,HMMSmart_KAZAL,PatternScan_KAZAL,HMMSmart_IGc2,superfamily_Amine_DH_B_like,HMMPfam_I-set,HMMPfam_ig,PatternScan_EF_HAND_1,HMMPfam_efhand,superfamily_SSF100895,superfamily_SSF47473,superfamily_SSF48726	-	no_errors
GANAB	0	genome.wustl.edu	37	11	62394094	62394094	+	Silent	SNP	T	T	G	novel	unknown	TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	11	62394094	62394094	T	G	SNP	GANAB	NM_198335.2	human	genbank	58_37c	-1	validated	silent	c.2526	p.S842	0.969	NULL	HMMPfam_Glyco_hydro_31,PatternScan_GLYCOSYL_HYDROL_F31_1,PatternScan_GLYCOSYL_HYDROL_F31_2	-	no_errors
H2AFY2	0	genome.wustl.edu	37	10	71835425	71835425	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	10	71835425	71835425	G	A	SNP	H2AFY2	NM_018649.2	human	genbank	58_37c	+1	validated	missense	c.11	p.R4Q	1.000	HMMSmart_H2A,superfamily_Histone-fold	HMMSmart_H2A,HMMPfam_Macro,HMMPfam_Histone,superfamily_Histone-fold,superfamily_SSF52949	-	no_errors
HGC6.3	0	genome.wustl.edu	37	6	168377262	168377262	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	6	168377262	168377262	T	G	SNP	HGC6.3	NM_001129895.1	human	genbank	58_37c	-1	predicted	missense	c.71	p.Q24P	0.012	NULL	NULL	-	no_errors
IGSF11	0	genome.wustl.edu	37	3	118647513	118647513	+	Silent	SNP	G	G	A	rs144392693	unknown	TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	3	118647513	118647513	G	A	SNP	IGSF11	NM_001015887.1	human	genbank	58_37c	-1	validated	silent	c.267	p.H89	0.991	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_V-set,HMMPfam_ig,superfamily_Immunoglobulin	-	no_errors
LAMB2	0	genome.wustl.edu	37	3	49163267	49163267	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	3	49163267	49163267	G	A	SNP	LAMB2	NM_002292.3	human	genbank	58_37c	-1	reviewed	nonsense	c.2401	p.Q801*	1.000	HMMPfam_Laminin_EGF,HMMSmart_EGF_Lam,superfamily_SSF57196	HMMPfam_Laminin_EGF,HMMSmart_EGF_Lam,PatternScan_EGF_LAM_1,HMMPfam_Laminin_N,HMMSmart_LamNT,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_SSF57196	-	no_errors
LAMB4	0	genome.wustl.edu	37	7	107684275	107684275	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	7	107684275	107684275	C	G	SNP	LAMB4	NM_007356.2	human	genbank	58_37c	-1	validated	missense	c.4393	p.G1465R	0.000	NULL	HMMPfam_Laminin_EGF,HMMSmart_SM00180,PatternScan_EGF_LAM_1,HMMPfam_Laminin_N,HMMSmart_SM00136,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_EGF/Laminin	-	no_errors
LOC100132562	0	genome.wustl.edu	37	11	47862853	47862853	+	RNA	SNP	T	T	G	novel	unknown	TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	11	47862853	47862853	T	G	SNP	LOC100132562	XR_039386.2	human	genbank	58_37c	+1	model	rna	NULL	NULL	0.032	-	-	-	pseudogene
LOC100287759	0	genome.wustl.edu	37	9	66454765	66454765	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	9	66454765	66454765	C	T	SNP	LOC100287759	XM_002342919.1	human	genbank	58_37c	-1	model	missense	c.190	p.A64T	0.018	NULL	NULL	-	no_errors
LOC642236	0	genome.wustl.edu	37	9	68433564	68433564	+	RNA	SNP	C	C	A	novel	unknown	TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	9	68433564	68433564	C	A	SNP	LOC642236	XR_041085.2	human	genbank	58_37c	-1	model	rna	NULL	NULL	1.000	-	-	-	no_errors
MAT2A	0	genome.wustl.edu	37	2	85769862	85769862	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	2	85769862	85769862	C	G	SNP	MAT2A	NM_005911.4	human	genbank	58_37c	+1	validated	missense	c.943	p.L315V	1.000	HMMPfam_S-AdoMet_synt_C,superfamily_S-adenosylmethionine synthetase	HMMPfam_S-AdoMet_synt_N,HMMPfam_S-AdoMet_synt_M,HMMPfam_S-AdoMet_synt_C,PatternScan_ADOMET_SYNTHETASE_1,PatternScan_ADOMET_SYNTHETASE_2,superfamily_S-adenosylmethionine synthetase	-	no_errors
MFSD8	0	genome.wustl.edu	37	4	128886286	128886286	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	4	128886286	128886286	C	T	SNP	MFSD8	NM_152778.2	human	genbank	58_37c	-1	reviewed	missense	c.3	p.M1I	0.738	NULL	HMMPfam_MFS_1,superfamily_MFS_gen_substrate_transporter	-	no_errors
MID1	0	genome.wustl.edu	37	X	10491176	10491176	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	X	10491176	10491176	C	G	SNP	MID1	NM_000381.2	human	genbank	58_37c	-1	reviewed	missense	c.712	p.E238Q	1.000	HMMSmart_SM00502	HMMPfam_zf-B_box,HMMSmart_SM00336,HMMSmart_SM00184,HMMSmart_SM00502,HMMPfam_SPRY,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,PatternScan_ZF_RING_1,HMMSmart_SM00449,HMMPfam_zf-C3HC4,superfamily_B-box zinc-binding domain,superfamily_RING/U-box	-	no_errors
NBPF1	0	genome.wustl.edu	37	1	16902844	16902844	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	1	16902844	16902844	G	T	SNP	NBPF1	NM_017940.3	human	genbank	58_37c	-1	predicted	missense	c.2037	p.D679E	0.001	NULL	HMMPfam_DUF1220	-	no_errors
NCRNA00164	0	genome.wustl.edu	37	2	133015485	133015485	+	RNA	SNP	C	C	A	novel	unknown	TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	2	133015485	133015485	C	A	SNP	NCRNA00164	NR_027020.2	human	genbank	58_37c	-1	validated	rna	NULL	NULL	0.001	-	-	-	pseudogene
NDUFS7	0	genome.wustl.edu	37	19	1389151	1389151	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	19	1389151	1389151	C	T	SNP	NDUFS7	ENST00000382445	human	ensembl	58_37c	+1	known	missense	c.442	p.R148C	0.866	NULL	NULL	-	no_errors
ODZ2	0	genome.wustl.edu	37	5	167645851	167645851	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	5	167645851	167645851	C	A	SNP	ODZ2	NM_001122679.1	human	genbank	58_37c	+1	inferred	missense	c.4928	p.P1643H	1.000	superfamily_Concanavalin A-like lectins/glucanases	HMMPfam_NHL,HMMPfam_EGF,HMMSmart_SM00181,HMMPfam_RHS_repeat,superfamily_Carboxypeptidase regulatory domain,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Ten_N,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF_2,superfamily_NHL repeat,superfamily_EGF/Laminin	-	no_errors
OSGEPL1	0	genome.wustl.edu	37	2	190620045	190620045	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	2	190620045	190620045	T	C	SNP	OSGEPL1	NM_022353.2	human	genbank	58_37c	-1	validated	missense	c.463	p.I155V	0.998	HMMPfam_Peptidase_M22,superfamily_Actin-like ATPase domain	HMMPfam_Peptidase_M22,superfamily_Actin-like ATPase domain	-	no_errors
PCDHA2	0	genome.wustl.edu	37	5	140174750	140174750	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	5	140174750	140174750	G	A	SNP	PCDHA2	NM_018905.2	human	genbank	58_37c	+1	reviewed	silent	c.201	p.A67	0.493	HMMSmart_SM00112,HMMPfam_Cadherin_2,superfamily_Cadherin-like	HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin_2,superfamily_Cadherin-like	-	no_errors
PCDHGA1	0	genome.wustl.edu	37	5	140711823	140711823	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	5	140711823	140711823	G	A	SNP	PCDHGA1	NM_018912.2	human	genbank	58_37c	+1	reviewed	silent	c.1572	p.Q524	0.914	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like	HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin_2,superfamily_Cadherin-like	-	no_errors
PCID2	0	genome.wustl.edu	37	13	113838712	113838712	+	Silent	SNP	T	C	C	novel	unknown	TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	13	113838712	113838712	T	C	SNP	PCID2	NM_001127202.1	human	genbank	58_37c	-1	validated	silent	c.633	p.T211	0.012	HMMSmart_SM00753	HMMPfam_PCI,HMMSmart_SM00753	-	no_errors
POM121L10P	0	genome.wustl.edu	37	22	25045815	25045815	+	RNA	SNP	G	G	C	novel	unknown	TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	22	25045815	25045815	G	C	SNP	POM121L10P	NR_024593.1	human	genbank	58_37c	-1	validated	rna	NULL	NULL	0.001	-	-	-	pseudogene
PTCHD2	0	genome.wustl.edu	37	1	11594443	11594443	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	1	11594443	11594443	G	A	SNP	PTCHD2	ENST00000304391	human	ensembl	58_37c	+1	known	missense	c.40	p.V14I	0.997	NULL	NULL	-	no_errors
RNF168	0	genome.wustl.edu	37	3	196199594	196199594	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	3	196199594	196199594	A	G	SNP	RNF168	NM_152617.2	human	genbank	58_37c	-1	provisional	missense	c.812	p.I271T	0.000	NULL	HMMSmart_RING,PatternScan_ZF_RING_1,HMMPfam_zf-C3HC4,superfamily_SSF57850	-	no_errors
SUPT16H	0	genome.wustl.edu	37	14	21834653	21834653	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	14	21834653	21834653	C	A	SNP	SUPT16H	NM_007192.3	human	genbank	58_37c	-1	reviewed	missense	c.991	p.D331Y	1.000	HMMPfam_Peptidase_M24,superfamily_Peptidase_M24_cat_core	HMMPfam_Peptidase_M24,superfamily_Peptidase_M24_cat_core,HMMPfam_Rtt106,HMMPfam_SPT16	-	no_errors
SUV420H1	0	genome.wustl.edu	37	11	67925891	67925891	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	11	67925891	67925891	G	A	SNP	SUV420H1	NM_017635.3	human	genbank	58_37c	-1	reviewed	missense	c.1922	p.A641V	0.000	NULL	HMMPfam_SET,HMMSmart_SM00317,superfamily_SET domain	-	no_errors
TRBV5-1	0	genome.wustl.edu	37	7	142021186	142021186	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	7	142021186	142021186	C	G	SNP	TRBV5-1	ENST00000390381	human	ensembl	58_37c	+1	known	missense	c.166	p.Q56E	0.414	HMMPfam_V-set,superfamily_SSF48726	HMMPfam_V-set,superfamily_SSF48726	-	no_stop_codon:bad_bp_length_for_coding_region
TSEN2	0	genome.wustl.edu	37	3	12531481	12531481	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	3	12531481	12531481	A	G	SNP	TSEN2	NM_001145392.1	human	genbank	58_37c	+1	reviewed	missense	c.182	p.Y61C	0.975	NULL	HMMPfam_tRNA_int_endo,superfamily_tRNA-intron endonuclease catalytic domain-like,HMMPfam_tRNA_int_endo_N	-	no_errors
UBR4	0	genome.wustl.edu	37	1	19415470	19415470	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	1	19415470	19415470	A	C	SNP	UBR4	NM_020765.2	human	genbank	58_37c	-1	validated	missense	c.14213	p.V4738G	1.000	superfamily_ARM repeat	HMMPfam_zf-UBR,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00396,superfamily_ARM repeat,PatternScan_ASP_GLU_RACEMASE_1	-	no_errors
VPS13D	0	genome.wustl.edu	37	1	12378344	12378344	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	1	12378344	12378344	C	T	SNP	VPS13D	NM_015378.2	human	genbank	58_37c	+1	reviewed	missense	c.7364	p.S2455F	1.000	NULL	HMMPfam_UBA,superfamily_UBA-like,HMMPfam_DUF1162,HMMSmart_SM00165	-	no_errors
ZNF302	0	genome.wustl.edu	37	19	35173717	35173717	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	19	35173717	35173717	T	A	SNP	ZNF302	NM_001012320.1	human	genbank	58_37c	+1	validated	missense	c.45	p.H15Q	0.996	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
ZNF330	0	genome.wustl.edu	37	4	142150852	142150852	+	Splice_Site	SNP	G	G	T	novel	unknown	TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	4	142150852	142150852	G	T	SNP	ZNF330	NM_014487.4	human	genbank	58_37c	+1	validated	splice_site	c.418+1	e5+1	1.000	-	-	-	no_errors
ZNF671	0	genome.wustl.edu	37	19	58232276	58232276	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	19	58232276	58232276	C	G	SNP	ZNF671	NM_024833.2	human	genbank	58_37c	-1	validated	missense	c.1178	p.G393A	1.000	superfamily_SSF57667	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
