Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ANK2	0	genome.wustl.edu	37	4	114153390	114153390	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E9-A22A-01A-11D-A159-09	TCGA-E9-A22A-10A-01D-A159-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	25bf7831-6878-4bac-b23d-e94a555b2232	8ecfa244-c94c-4b57-8b3b-a1035c270042	4	114153390	114153390	G	C	SNP	ANK2	NM_001148.4	human	genbank	58_37c	+1	reviewed	missense	c.458	p.G153A	1.000	HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK	HMMPfam_Death,HMMSmart_DEATH,HMMPfam_ZU5,HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK,superfamily_DEATH_like,PatternScan_ALDEHYDE_DEHYDR_GLU	-	no_errors
AVL9	0	genome.wustl.edu	37	7	32590994	32590994	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-E9-A22A-01A-11D-A159-09	TCGA-E9-A22A-10A-01D-A159-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	25bf7831-6878-4bac-b23d-e94a555b2232	8ecfa244-c94c-4b57-8b3b-a1035c270042	7	32590994	32590994	T	G	SNP	AVL9	NM_015060.1	human	genbank	58_37c	+1	provisional	missense	c.421	p.Y141D	1.000	HMMPfam_Avl9	HMMPfam_Avl9	-	no_errors
BHLHB9	0	genome.wustl.edu	37	X	102004787	102004787	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E9-A22A-01A-11D-A159-09	TCGA-E9-A22A-10A-01D-A159-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	25bf7831-6878-4bac-b23d-e94a555b2232	8ecfa244-c94c-4b57-8b3b-a1035c270042	X	102004787	102004787	C	T	SNP	BHLHB9	NM_001142524.1	human	genbank	58_37c	+1	validated	silent	c.864	p.C288	0.567	NULL	HMMPfam_DUF634,superfamily_ARM-type_fold	-	no_errors
C1orf116	0	genome.wustl.edu	37	1	207195445	207195445	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E9-A22A-01A-11D-A159-09	TCGA-E9-A22A-10A-01D-A159-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	25bf7831-6878-4bac-b23d-e94a555b2232	8ecfa244-c94c-4b57-8b3b-a1035c270042	1	207195445	207195445	C	A	SNP	C1orf116	NM_023938.5	human	genbank	58_37c	-1	validated	missense	c.1664	p.S555I	0.000	NULL	NULL	-	no_errors
CCDC144NL	0	genome.wustl.edu	37	17	20768762	20768763	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-E9-A22A-01A-11D-A159-09	TCGA-E9-A22A-10A-01D-A159-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	25bf7831-6878-4bac-b23d-e94a555b2232	8ecfa244-c94c-4b57-8b3b-a1035c270042	17	20768762	20768763	-	C	INS	CCDC144NL	NM_001004306.1	human	genbank	58_37c	-1	provisional	frame_shift_ins	c.632_631	p.K211fs	0.020:0.028	NULL	NULL	-	no_errors
CCDC82	0	genome.wustl.edu	37	11	96117385	96117387	+	In_Frame_Del	DEL	TCT	TCT	-	novel	unknown	TCGA-E9-A22A-01A-11D-A159-09	TCGA-E9-A22A-10A-01D-A159-09	TCT	TCT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	25bf7831-6878-4bac-b23d-e94a555b2232	8ecfa244-c94c-4b57-8b3b-a1035c270042	11	96117385	96117387	TCT	-	DEL	CCDC82	NM_024725.3	human	genbank	58_37c	-1	validated	in_frame_del	c.527_525	p.E175in_frame_del	0.005:0.012:0.029	NULL	NULL	-	no_errors
CTAGE4	0	genome.wustl.edu	37	7	143882673	143882673	+	Missense_Mutation	SNP	C	C	T	rs62484795	unknown	TCGA-E9-A22A-01A-11D-A159-09	TCGA-E9-A22A-10A-01D-A159-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	25bf7831-6878-4bac-b23d-e94a555b2232	8ecfa244-c94c-4b57-8b3b-a1035c270042	7	143882673	143882673	C	T	SNP	CTAGE4	NM_198495.2	human	genbank	58_37c	+1	validated	missense	c.2077	p.L693F	0.003	NULL	NULL	-	no_errors
CTNND1	0	genome.wustl.edu	37	11	57569469	57569469	+	Silent	SNP	C	C	G	novel	unknown	TCGA-E9-A22A-01A-11D-A159-09	TCGA-E9-A22A-10A-01D-A159-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	25bf7831-6878-4bac-b23d-e94a555b2232	8ecfa244-c94c-4b57-8b3b-a1035c270042	11	57569469	57569469	C	G	SNP	CTNND1	NM_001085458.1	human	genbank	58_37c	+1	validated	silent	c.1221	p.L407	1.000	HMMPfam_Arm,HMMSmart_SM00185,superfamily_ARM repeat	HMMPfam_Arm,HMMSmart_SM00185,superfamily_ARM repeat	-	no_errors
CUBN	0	genome.wustl.edu	37	10	16967642	16967642	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E9-A22A-01A-11D-A159-09	TCGA-E9-A22A-10A-01D-A159-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	25bf7831-6878-4bac-b23d-e94a555b2232	8ecfa244-c94c-4b57-8b3b-a1035c270042	10	16967642	16967642	C	T	SNP	CUBN	NM_001081.3	human	genbank	58_37c	-1	reviewed	missense	c.6403	p.E2135K	1.000	HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain	PatternScan_ASX_HYDROXYL,HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain,HMMSmart_SM00179,HMMPfam_EGF,HMMSmart_SM00181,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF_CA,PatternScan_EGF_CA,superfamily_EGF/Laminin	-	no_errors
DIP2A	0	genome.wustl.edu	37	21	47931375	47931375	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E9-A22A-01A-11D-A159-09	TCGA-E9-A22A-10A-01D-A159-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	25bf7831-6878-4bac-b23d-e94a555b2232	8ecfa244-c94c-4b57-8b3b-a1035c270042	21	47931375	47931375	C	G	SNP	DIP2A	NM_015151.3	human	genbank	58_37c	+1	reviewed	missense	c.950	p.T317R	0.985	NULL	HMMPfam_AMP-binding,HMMPfam_DMAP_binding,superfamily_Acetyl-CoA synthetase-like	-	no_errors
ENSG00000183458	0	genome.wustl.edu	37	16	15023409	15023409	+	Missense_Mutation	SNP	C	C	T	rs80016501	unknown	TCGA-E9-A22A-01A-11D-A159-09	TCGA-E9-A22A-10A-01D-A159-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	25bf7831-6878-4bac-b23d-e94a555b2232	8ecfa244-c94c-4b57-8b3b-a1035c270042	16	15023409	15023409	C	T	SNP	ENSG00000183458	ENST00000435714	human	ensembl	58_37c	+1	known	missense	c.140	p.T47M	0.696	NULL	HMMPfam_GPS,HMMSmart_SM00303,HMMPfam_PLAT,HMMSmart_SM00308,superfamily_Lipase/lipooxygenase domain (PLAT/LH2 domain)	-	no_start_codon
ENSG00000231008	0	genome.wustl.edu	37	14	106733807	106733808	+	RNA	INS	-	-	ATG	novel	unknown	TCGA-E9-A22A-01A-11D-A159-09	TCGA-E9-A22A-10A-01D-A159-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	25bf7831-6878-4bac-b23d-e94a555b2232	8ecfa244-c94c-4b57-8b3b-a1035c270042	14	106733807	106733808	-	ATG	INS	ENSG00000231008	ENST00000443661	human	ensembl	58_37c	+1	known	rna	NULL	NULL	0.002:0.004	-	-	-	no_errors
F13B	0	genome.wustl.edu	37	1	197009842	197009842	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E9-A22A-01A-11D-A159-09	TCGA-E9-A22A-10A-01D-A159-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	25bf7831-6878-4bac-b23d-e94a555b2232	8ecfa244-c94c-4b57-8b3b-a1035c270042	1	197009842	197009842	C	T	SNP	F13B	NM_001994.2	human	genbank	58_37c	-1	reviewed	missense	c.1762	p.E588K	0.344	superfamily_Complement_control_module	HMMPfam_Sushi,HMMSmart_CCP,superfamily_Complement_control_module	-	no_errors
FAM151A	0	genome.wustl.edu	37	1	55075124	55075124	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-E9-A22A-01A-11D-A159-09	TCGA-E9-A22A-10A-01D-A159-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	25bf7831-6878-4bac-b23d-e94a555b2232	8ecfa244-c94c-4b57-8b3b-a1035c270042	1	55075124	55075124	T	C	SNP	FAM151A	NM_176782.2	human	genbank	58_37c	-1	validated	missense	c.1575	p.I525M	0.961	NULL	HMMPfam_DUF2181	-	no_errors
GALNTL4	0	genome.wustl.edu	37	11	11470443	11470443	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E9-A22A-01A-11D-A159-09	TCGA-E9-A22A-10A-01D-A159-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	25bf7831-6878-4bac-b23d-e94a555b2232	8ecfa244-c94c-4b57-8b3b-a1035c270042	11	11470443	11470443	G	T	SNP	GALNTL4	NM_198516.2	human	genbank	58_37c	-1	validated	missense	c.276	p.F92L	1.000	NULL	HMMPfam_Ricin_B_lectin,HMMSmart_SM00458,HMMPfam_Glycos_transf_2,superfamily_Ricin B-like lectins,superfamily_Nucleotide-diphospho-sugar transferases	-	no_errors
GTF3C1	0	genome.wustl.edu	37	16	27517273	27517273	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-E9-A22A-01A-11D-A159-09	TCGA-E9-A22A-10A-01D-A159-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	25bf7831-6878-4bac-b23d-e94a555b2232	8ecfa244-c94c-4b57-8b3b-a1035c270042	16	27517273	27517273	T	A	SNP	GTF3C1	NM_001520.3	human	genbank	58_37c	-1	validated	missense	c.1717	p.S573C	0.000	NULL	HMMPfam_B-block_TFIIIC	-	no_errors
HDGFRP2	0	genome.wustl.edu	37	19	4499633	4499647	+	In_Frame_Del	DEL	AGCTGGCCGGGGAGG	AGCTGGCCGGGGAGG	-	novel	unknown	TCGA-E9-A22A-01A-11D-A159-09	TCGA-E9-A22A-10A-01D-A159-09	AGCTGGCCGGGGAGG	AGCTGGCCGGGGAGG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	25bf7831-6878-4bac-b23d-e94a555b2232	8ecfa244-c94c-4b57-8b3b-a1035c270042	19	4499633	4499647	AGCTGGCCGGGGAGG	-	DEL	HDGFRP2	NM_001001520.1	human	genbank	58_37c	+1	reviewed	in_frame_del	c.1721_1735	p.EELAG578in_frame_del	0.074:0.085:0.097:0.108:0.119:0.130:0.141:0.151:0.162:0.172:0.183:0.193:0.203:0.213:0.223	NULL	HMMPfam_PWWP,HMMSmart_SM00293,superfamily_Tudor/PWWP/MBT	-	no_errors
KIAA1024	0	genome.wustl.edu	37	15	79748798	79748798	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E9-A22A-01A-11D-A159-09	TCGA-E9-A22A-10A-01D-A159-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	25bf7831-6878-4bac-b23d-e94a555b2232	8ecfa244-c94c-4b57-8b3b-a1035c270042	15	79748798	79748798	G	A	SNP	KIAA1024	NM_015206.2	human	genbank	58_37c	+1	validated	silent	c.309	p.E103	1.000	NULL	HMMPfam_UPF0258	-	no_errors
KSR2	0	genome.wustl.edu	37	12	117962830	117962830	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E9-A22A-01A-11D-A159-09	TCGA-E9-A22A-10A-01D-A159-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	25bf7831-6878-4bac-b23d-e94a555b2232	8ecfa244-c94c-4b57-8b3b-a1035c270042	12	117962830	117962830	G	A	SNP	KSR2	NM_173598.4	human	genbank	58_37c	-1	validated	silent	c.1959	p.H653	0.943	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase	HMMSmart_SM00219,HMMPfam_C1_1,HMMSmart_SM00109,PatternScan_ZF_DAG_PE_1,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase,superfamily_Cysteine-rich domain	-	no_errors
LOC100288755	0	genome.wustl.edu	37	21	9865818	9865818	+	RNA	SNP	G	G	T	novel	unknown	TCGA-E9-A22A-01A-11D-A159-09	TCGA-E9-A22A-10A-01D-A159-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	25bf7831-6878-4bac-b23d-e94a555b2232	8ecfa244-c94c-4b57-8b3b-a1035c270042	21	9865818	9865818	G	T	SNP	LOC100288755	XR_078568.1	human	genbank	58_37c	-1	model	rna	NULL	NULL	0.030	-	-	-	pseudogene
LOC100291746	0	genome.wustl.edu	37	X	299311	299312	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-E9-A22A-01A-11D-A159-09	TCGA-E9-A22A-10A-01D-A159-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	25bf7831-6878-4bac-b23d-e94a555b2232	8ecfa244-c94c-4b57-8b3b-a1035c270042	X	299311	299312	-	T	INS	LOC100291746	XM_002346314.1	human	genbank	58_37c	+1	model	frame_shift_ins	c.129_130	p.P43fs	0.017:0.017	NULL	NULL	-	no_start_codon:no_stop_codon
LPIN1	0	genome.wustl.edu	37	2	11959665	11959665	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-E9-A22A-01A-11D-A159-09	TCGA-E9-A22A-10A-01D-A159-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	25bf7831-6878-4bac-b23d-e94a555b2232	8ecfa244-c94c-4b57-8b3b-a1035c270042	2	11959665	11959665	A	G	SNP	LPIN1	NM_145693.1	human	genbank	58_37c	+1	reviewed	missense	c.2350	p.K784E	1.000	HMMPfam_LNS2,HMMSmart_LNS2,superfamily_SSF56784	HMMPfam_Lipin_N,HMMPfam_LNS2,HMMSmart_LNS2,superfamily_SSF56784	-	no_errors
MST1P9	0	genome.wustl.edu	37	1	17083782	17083782	+	RNA	SNP	A	A	C	novel	unknown	TCGA-E9-A22A-01A-11D-A159-09	TCGA-E9-A22A-10A-01D-A159-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	25bf7831-6878-4bac-b23d-e94a555b2232	8ecfa244-c94c-4b57-8b3b-a1035c270042	1	17083782	17083782	A	C	SNP	MST1P9	NR_002729.2	human	genbank	58_37c	-1	validated	rna	NULL	NULL	1.000	-	-	-	pseudogene
MUC21	0	genome.wustl.edu	37	6	30954439	30954439	+	Missense_Mutation	SNP	A	A	G	rs147266731	unknown	TCGA-E9-A22A-01A-11D-A159-09	TCGA-E9-A22A-10A-01D-A159-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	25bf7831-6878-4bac-b23d-e94a555b2232	8ecfa244-c94c-4b57-8b3b-a1035c270042	6	30954439	30954439	A	G	SNP	MUC21	NM_001010909.2	human	genbank	58_37c	+1	validated	missense	c.487	p.S163G	0.077	NULL	NULL	-	no_errors
MUM1L1	0	genome.wustl.edu	37	X	105450851	105450851	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-E9-A22A-01A-11D-A159-09	TCGA-E9-A22A-10A-01D-A159-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	25bf7831-6878-4bac-b23d-e94a555b2232	8ecfa244-c94c-4b57-8b3b-a1035c270042	X	105450851	105450851	T	G	SNP	MUM1L1	ENST00000337685	human	ensembl	58_37c	+1	known	missense	c.1426	p.Y476D	1.000	superfamily_SSF63748	superfamily_SSF63748	-	no_errors
MYLK3	0	genome.wustl.edu	37	16	46764603	46764603	+	Silent	SNP	A	A	G	novel	unknown	TCGA-E9-A22A-01A-11D-A159-09	TCGA-E9-A22A-10A-01D-A159-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	25bf7831-6878-4bac-b23d-e94a555b2232	8ecfa244-c94c-4b57-8b3b-a1035c270042	16	46764603	46764603	A	G	SNP	MYLK3	NM_182493.2	human	genbank	58_37c	-1	validated	silent	c.1470	p.S490	0.978	superfamily_Kinase_like	HMMSmart_S_TKc,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
NCRNA00183	0	genome.wustl.edu	37	X	73289218	73289218	+	RNA	SNP	C	C	T	novel	unknown	TCGA-E9-A22A-01A-11D-A159-09	TCGA-E9-A22A-10A-01D-A159-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	25bf7831-6878-4bac-b23d-e94a555b2232	8ecfa244-c94c-4b57-8b3b-a1035c270042	X	73289218	73289218	C	T	SNP	NCRNA00183	NR_024582.1	human	genbank	58_37c	+1	validated	rna	NULL	NULL	0.571	-	-	-	no_errors
OR10G7	0	genome.wustl.edu	37	11	123909447	123909447	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E9-A22A-01A-11D-A159-09	TCGA-E9-A22A-10A-01D-A159-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	25bf7831-6878-4bac-b23d-e94a555b2232	8ecfa244-c94c-4b57-8b3b-a1035c270042	11	123909447	123909447	C	T	SNP	OR10G7	NM_001004463.1	human	genbank	58_37c	-1	provisional	missense	c.262	p.G88S	0.000	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
OR2L13	0	genome.wustl.edu	37	1	248263455	248263455	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E9-A22A-01A-11D-A159-09	TCGA-E9-A22A-10A-01D-A159-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	25bf7831-6878-4bac-b23d-e94a555b2232	8ecfa244-c94c-4b57-8b3b-a1035c270042	1	248263455	248263455	C	T	SNP	OR2L13	NM_175911.2	human	genbank	58_37c	+1	provisional	missense	c.778	p.R260W	0.000	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
OR2M7	0	genome.wustl.edu	37	1	248487711	248487711	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E9-A22A-01A-11D-A159-09	TCGA-E9-A22A-10A-01D-A159-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	25bf7831-6878-4bac-b23d-e94a555b2232	8ecfa244-c94c-4b57-8b3b-a1035c270042	1	248487711	248487711	G	A	SNP	OR2M7	NM_001004691.1	human	genbank	58_37c	-1	provisional	nonsense	c.160	p.Q54*	0.003	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
OR51B5	0	genome.wustl.edu	37	11	5364542	5364558	+	Frame_Shift_Del	DEL	CAGCCCCAGGTCTGTGG	CAGCCCCAGGTCTGTGG	-	novel	unknown	TCGA-E9-A22A-01A-11D-A159-09	TCGA-E9-A22A-10A-01D-A159-09	CAGCCCCAGGTCTGTGG	CAGCCCCAGGTCTGTGG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	25bf7831-6878-4bac-b23d-e94a555b2232	8ecfa244-c94c-4b57-8b3b-a1035c270042	11	5364542	5364558	CAGCCCCAGGTCTGTGG	-	DEL	OR51B5	NM_001005567.1	human	genbank	58_37c	-1	provisional	frame_shift_del	c.213_197	p.A66fs	0.016:0.014:0.000:0.000:0.000:0.000:0.000:0.604:0.601:0.984:0.996:0.990:0.276:0.398:0.391:0.086:0.125	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
PKD1L2	0	genome.wustl.edu	37	16	81242149	81242150	+	Frame_Shift_Del	DEL	TT	TT	-	novel	unknown	TCGA-E9-A22A-01A-11D-A159-09	TCGA-E9-A22A-10A-01D-A159-09	TT	TT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	25bf7831-6878-4bac-b23d-e94a555b2232	8ecfa244-c94c-4b57-8b3b-a1035c270042	16	81242149	81242150	TT	-	DEL	PKD1L2	NM_001076780.1	human	genbank	58_37c	-1	reviewed	frame_shift_del	c.707_706	p.N236fs	0.998:0.999	NULL	HMMPfam_Lectin_C,HMMSmart_SM00034,superfamily_C-type lectin-like	-	no_errors
PTGS2	0	genome.wustl.edu	37	1	186648296	186648296	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E9-A22A-01A-11D-A159-09	TCGA-E9-A22A-10A-01D-A159-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	25bf7831-6878-4bac-b23d-e94a555b2232	8ecfa244-c94c-4b57-8b3b-a1035c270042	1	186648296	186648296	G	A	SNP	PTGS2	NM_000963.2	human	genbank	58_37c	-1	reviewed	silent	c.207	p.P69	0.377	superfamily_Heme-dependent peroxidases	HMMPfam_An_peroxidase,HMMPfam_EGF,superfamily_Heme-dependent peroxidases,superfamily_EGF/Laminin	-	no_errors
RERE	0	genome.wustl.edu	37	1	8716322	8716327	+	In_Frame_Del	DEL	TCTTTG	TCTTTG	-	novel	unknown	TCGA-E9-A22A-01A-11D-A159-09	TCGA-E9-A22A-10A-01D-A159-09	TCTTTG	TCTTTG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	25bf7831-6878-4bac-b23d-e94a555b2232	8ecfa244-c94c-4b57-8b3b-a1035c270042	1	8716322	8716327	TCTTTG	-	DEL	RERE	NM_001042681.1	human	genbank	58_37c	-1	reviewed	in_frame_del	c.35_30	p.DK10in_frame_del	1.000:1.000:1.000:1.000:1.000:1.000	NULL	HMMPfam_GATA,HMMSmart_SM00401,HMMPfam_ELM2,HMMSmart_SM00717,HMMPfam_BAH,HMMSmart_SM00439,HMMPfam_Atrophin-1,superfamily_Homeodomain-like,HMMPfam_Myb_DNA-binding,superfamily_Glucocorticoid receptor-like (DNA-binding domain)	-	no_errors
SLC38A10	0	genome.wustl.edu	37	17	79219501	79219503	+	In_Frame_Del	DEL	ATG	ATG	-	novel	unknown	TCGA-E9-A22A-01A-11D-A159-09	TCGA-E9-A22A-10A-01D-A159-09	ATG	ATG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	25bf7831-6878-4bac-b23d-e94a555b2232	8ecfa244-c94c-4b57-8b3b-a1035c270042	17	79219501	79219503	ATG	-	DEL	SLC38A10	NM_001037984.1	human	genbank	58_37c	-1	validated	in_frame_del	c.3215_3213	p.I1072in_frame_del	0.113:0.154:0.221	NULL	HMMPfam_Aa_trans	-	no_errors
SLC39A4	0	genome.wustl.edu	37	8	145640174	145640174	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-E9-A22A-01A-11D-A159-09	TCGA-E9-A22A-10A-01D-A159-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	25bf7831-6878-4bac-b23d-e94a555b2232	8ecfa244-c94c-4b57-8b3b-a1035c270042	8	145640174	145640174	T	A	SNP	SLC39A4	NM_130849.2	human	genbank	58_37c	-1	reviewed	missense	c.911	p.Q304L	0.998	NULL	HMMPfam_Zip	-	no_errors
SLC7A14	0	genome.wustl.edu	37	3	170184915	170184915	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E9-A22A-01A-11D-A159-09	TCGA-E9-A22A-10A-01D-A159-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	25bf7831-6878-4bac-b23d-e94a555b2232	8ecfa244-c94c-4b57-8b3b-a1035c270042	3	170184915	170184915	C	G	SNP	SLC7A14	NM_020949.2	human	genbank	58_37c	-1	validated	missense	c.2244	p.K748N	1.000	NULL	HMMPfam_AA_permease	-	no_errors
STAB1	0	genome.wustl.edu	37	3	52544484	52544484	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E9-A22A-01A-11D-A159-09	TCGA-E9-A22A-10A-01D-A159-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	25bf7831-6878-4bac-b23d-e94a555b2232	8ecfa244-c94c-4b57-8b3b-a1035c270042	3	52544484	52544484	C	A	SNP	STAB1	NM_015136.2	human	genbank	58_37c	+1	reviewed	nonsense	c.2748	p.C916*	1.000	HMMSmart_SM00181,superfamily_EGF/Laminin	HMMPfam_Xlink,HMMSmart_SM00445,PatternScan_LINK_1,HMMPfam_Fasciclin,HMMSmart_SM00554,superfamily_FAS1 domain,HMMSmart_SM00179,HMMPfam_Laminin_EGF,HMMSmart_SM00180,PatternScan_EGF_LAM_1,HMMPfam_EGF,HMMSmart_SM00181,superfamily_Growth factor receptor domain,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF_2,superfamily_C-type lectin-like,PatternScan_CYTOCHROME_P450,superfamily_EGF/Laminin	-	no_errors
STIL	0	genome.wustl.edu	37	1	47748020	47748020	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E9-A22A-01A-11D-A159-09	TCGA-E9-A22A-10A-01D-A159-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	25bf7831-6878-4bac-b23d-e94a555b2232	8ecfa244-c94c-4b57-8b3b-a1035c270042	1	47748020	47748020	C	G	SNP	STIL	NM_001048166.1	human	genbank	58_37c	-1	reviewed	missense	c.1245	p.Q415H	0.999	NULL	NULL	-	no_errors
ZNF431	0	genome.wustl.edu	37	19	21365903	21365903	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E9-A22A-01A-11D-A159-09	TCGA-E9-A22A-10A-01D-A159-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	25bf7831-6878-4bac-b23d-e94a555b2232	8ecfa244-c94c-4b57-8b3b-a1035c270042	19	21365903	21365903	G	C	SNP	ZNF431	NM_133473.2	human	genbank	58_37c	+1	validated	missense	c.797	p.G266A	1.000	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
