Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	dataset	type	classification	start	end	gene	chr	ref_allele	tum_allele1	tum_allele2	context
PDE6B	5158	genome.wustl.edu	36	4	637931	637931	+	Silent	SNP	G	A	A	novel	Unknown	TCGA-24-1413-01	TCGA-24-1413-10	G	G	A	A	G	A	Unknown	Valid	LOH	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	637931	637931	PDE6B	4	G	A	A	38
CNTN4	152330	genome.wustl.edu	36	3	3053974	3053974	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-24-1413-01	TCGA-24-1413-10	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	3053974	3053974	CNTN4	3	C	C	A	22
LOC100131257		genome.wustl.edu	36	7	7085167	7085167	+	Nonsense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-24-1413-01	TCGA-24-1413-10	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Nonsense_Mutation	SNP	7085167	7085167	LOC100131257	7	C	C	A	29
TP53	7157	genome.wustl.edu	36	17	7518982	7518982	+	Nonsense_Mutation	SNP	C	A	A	novel	Unknown	TCGA-24-1413-01	TCGA-24-1413-10	C	C	A	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Nonsense_Mutation	SNP	7518982	7518982	TP53	17	C	A	A	30
MYH10	4628	genome.wustl.edu	36	17	8362699	8362699	+	Missense_Mutation	SNP	C	T	T	novel	Unknown	TCGA-24-1413-01	TCGA-24-1413-10	C	C	T	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	8362699	8362699	MYH10	17	C	T	T	19
TPTE	7179	genome.wustl.edu	36	21	9963816	9963816	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-24-1413-01	TCGA-24-1413-10	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	9963816	9963816	TPTE	21	G	G	T	33
DNAH5	1767	genome.wustl.edu	36	5	13917743	13917743	+	Nonsense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-24-1413-01	TCGA-24-1413-10	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Nonsense_Mutation	SNP	13917743	13917743	DNAH5	5	A	A	T	10
DNAH5	1767	genome.wustl.edu	36	5	13947789	13947789	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-24-1413-01	TCGA-24-1413-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	13947789	13947789	DNAH5	5	C	C	T	26
MKL2	57496	genome.wustl.edu	36	16	14247013	14247013	+	Missense_Mutation	SNP	T	T	G	novel	Unknown	TCGA-24-1413-01	TCGA-24-1413-10	T	T	T	G	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	14247013	14247013	MKL2	16	T	T	G	56
PADI4	23569	genome.wustl.edu	36	1	17558442	17558442	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-24-1413-01	TCGA-24-1413-10	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	17558442	17558442	PADI4	1	C	C	T	32
OR4N4	283694	genome.wustl.edu	36	15	19884684	19884684	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-24-1413-01	TCGA-24-1413-10	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	19884684	19884684	OR4N4	15	A	A	T	4
KCNJ12	3768	genome.wustl.edu	36	17	21259375	21259375	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-1413-01	TCGA-24-1413-10	G	G	G	A	G	A	Unknown	Valid	Germline	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	21259375	21259375	KCNJ12	17	G	G	A	38
IFNA1	3439	genome.wustl.edu	36	9	21430580	21430580	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-24-1413-01	TCGA-24-1413-10	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	21430580	21430580	IFNA1	9	A	A	G	12
ATAD5	79915	genome.wustl.edu	36	17	26186388	26186388	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-24-1413-01	TCGA-24-1413-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	26186388	26186388	ATAD5	17	C	C	T	32
BAZ1A	11177	genome.wustl.edu	36	14	34401181	34401181	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-24-1413-01	TCGA-24-1413-10	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	34401181	34401181	BAZ1A	14	T	T	A	62
LOC728448	728448	genome.wustl.edu	36	1	39792607	39792607	+	Splice_Site_SNP	SNP	C	C	A	novel	Unknown	TCGA-24-1413-01	TCGA-24-1413-10	C	C	C	A	C	A	Unknown	Valid	Germline	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Splice_Site_SNP	SNP	39792607	39792607	LOC728448	1	C	C	A	18
CCR9	10803	genome.wustl.edu	36	3	45918252	45918252	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-24-1413-01	TCGA-24-1413-10	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	45918252	45918252	CCR9	3	G	G	T	33
PKHD1	5314	genome.wustl.edu	36	6	51998297	51998297	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-24-1413-01	TCGA-24-1413-10	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	51998297	51998297	PKHD1	6	C	C	G	29
TCF12	6938	genome.wustl.edu	36	15	55362041	55362041	+	Silent	SNP	G	G	C	novel	Unknown	TCGA-24-1413-01	TCGA-24-1413-10	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	55362041	55362041	TCF12	15	G	G	C	42
PPM1H	57460	genome.wustl.edu	36	12	61374034	61374034	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-24-1413-01	TCGA-24-1413-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	61374034	61374034	PPM1H	12	G	G	A	47
SLC22A25	387601	genome.wustl.edu	36	11	62688035	62688035	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-24-1413-01	TCGA-24-1413-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	62688035	62688035	SLC22A25	11	C	C	T	31
GPHB5	122876	genome.wustl.edu	36	14	62849570	62849570	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-24-1413-01	TCGA-24-1413-10	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	62849570	62849570	GPHB5	14	T	T	C	62
ZNF446	55663	genome.wustl.edu	36	19	63680403	63680403	+	Silent	SNP	A	G	G	novel	Unknown	TCGA-24-1413-01	TCGA-24-1413-10	A	A	G	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	63680403	63680403	ZNF446	19	A	G	G	8
GAL3ST3	89792	genome.wustl.edu	36	11	65567676	65567676	+	Silent	SNP	C	T	T	novel	Unknown	TCGA-24-1413-01	TCGA-24-1413-10	C	C	T	T	T	T	Unknown	Valid	Germline	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	65567676	65567676	GAL3ST3	11	C	T	T	27
KBTBD8	84541	genome.wustl.edu	36	3	67141284	67141284	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-24-1413-01	TCGA-24-1413-10	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	67141284	67141284	KBTBD8	3	C	C	G	21
ADHFE1	137872	genome.wustl.edu	36	8	67520078	67520078	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-24-1413-01	TCGA-24-1413-10	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	67520078	67520078	ADHFE1	8	C	C	A	18
UGT2A1	10941	genome.wustl.edu	36	4	70499620	70499620	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-24-1413-01	TCGA-24-1413-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	70499620	70499620	UGT2A1	4	C	C	T	19
TRPA1	8989	genome.wustl.edu	36	8	73112841	73112841	+	Silent	SNP	A	A	G	novel	Unknown	TCGA-24-1413-01	TCGA-24-1413-10	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	73112841	73112841	TRPA1	8	A	A	G	3
ENSG00000179799		genome.wustl.edu	36	3	75489141	75489141	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-24-1413-01	TCGA-24-1413-10	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	75489141	75489141	ENSG00000179799	3	C	C	G	29
NARS2	79731	genome.wustl.edu	36	11	77957396	77957396	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-24-1413-01	TCGA-24-1413-10	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	77957396	77957396	NARS2	11	C	C	G	20
GRID1	2894	genome.wustl.edu	36	10	87956304	87956304	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-1413-01	TCGA-24-1413-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	87956304	87956304	GRID1	10	G	G	A	40
IGKV4-1		genome.wustl.edu	36	2	88966564	88966564	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-24-1413-01	TCGA-24-1413-10	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	88966564	88966564	IGKV4-1	2	G	G	T	36
ENSG00000204456		genome.wustl.edu	36	11	89139788	89139788	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-24-1413-01	TCGA-24-1413-10	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	89139788	89139788	ENSG00000204456	11	A	A	G	12
EPHA3	2042	genome.wustl.edu	36	3	89582187	89582187	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-24-1413-01	TCGA-24-1413-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	89582187	89582187	EPHA3	3	G	G	A	33
TRIM4	89122	genome.wustl.edu	36	7	99327849	99327849	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-24-1413-01	TCGA-24-1413-10	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	99327849	99327849	TRIM4	7	A	A	G	9
ADH1C	126	genome.wustl.edu	36	4	100476955	100476955	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-24-1413-01	TCGA-24-1413-10	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	100476955	100476955	ADH1C	4	T	T	C	49
RHOF	54509	genome.wustl.edu	36	12	120701841	120701841	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-24-1413-01	TCGA-24-1413-10	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	120701841	120701841	RHOF	12	G	G	C	38
ACPP	55	genome.wustl.edu	36	3	133558366	133558366	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-24-1413-01	TCGA-24-1413-10	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	133558366	133558366	ACPP	3	G	G	T	48
SSBP1	6742	genome.wustl.edu	36	7	141089911	141089911	+	Missense_Mutation	SNP	T	T	G	novel	Unknown	TCGA-24-1413-01	TCGA-24-1413-10	T	T	T	G	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	141089911	141089911	SSBP1	7	T	T	G	49
HCN3	57657	genome.wustl.edu	36	1	153520961	153520961	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-24-1413-01	TCGA-24-1413-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	153520961	153520961	HCN3	1	C	C	T	31
ADIPOQ	9370	genome.wustl.edu	36	3	188054895	188054895	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-24-1413-01	TCGA-24-1413-10	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	188054895	188054895	ADIPOQ	3	G	G	T	44
C1orf107	27042	genome.wustl.edu	36	1	208082350	208082351	+	Missense	DNP	GG	GG	CT	novel	Unknown	TCGA-24-1413-01	TCGA-24-1413-10	GG	GG	GG	CT	GG	GG	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense	DNP	208082350	208082351	C1orf107	1	GG	GG	CT	47
ILKAP	80895	genome.wustl.edu	36	2	238767691	238767691	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-24-1413-01	TCGA-24-1413-10	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	238767691	238767691	ILKAP	2	A	A	G	1
EXO1	9156	genome.wustl.edu	36	1	240083293	240083293	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-1413-01	TCGA-24-1413-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	240083293	240083293	EXO1	1	G	G	A	34
CACNA2D4	93589	genome.wustl.edu	36	12	1866479	1866479	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-24-1413-01	TCGA-24-1413-10	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	1866479	1866479	CACNA2D4	12	C	C	A	29
