Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
ABCA6	23460	broad.mit.edu	37	17	67080280	67080280	+	Intron	SNP	T	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB7	22	broad.mit.edu	37	X	74295224	74295224	+	Silent	SNP	A	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABRA	137735	broad.mit.edu	37	8	107773333	107773333	+	Missense_Mutation	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACAD9	28976	broad.mit.edu	37	3	128623262	128623262	+	Missense_Mutation	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSS3	79611	broad.mit.edu	37	12	81593168	81593168	+	Silent	SNP	G	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS15	170689	broad.mit.edu	37	11	130332082	130332082	+	Silent	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTSL4	54507	broad.mit.edu	37	1	150532710	150532710	+	3'UTR	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGAP1	116987	broad.mit.edu	37	2	237028796	237028796	+	Intron	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AK5	26289	broad.mit.edu	37	1	77752671	77752671	+	Nonsense_Mutation	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKAP3	10566	broad.mit.edu	37	12	4744749	4744749	+	Intron	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKR1B1	231	broad.mit.edu	37	7	134132119	134132119	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKR1C1	1645	broad.mit.edu	37	10	5014908	5014909	+	Frame_Shift_Ins	INS	-	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALLC	55821	broad.mit.edu	37	2	3730410	3730410	+	Intron	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALPP	250	broad.mit.edu	37	2	233245131	233245131	+	Missense_Mutation	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALX1	8092	broad.mit.edu	37	12	85695254	85695254	+	3'UTR	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK3	288	broad.mit.edu	37	10	61833291	61833291	+	Missense_Mutation	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKFY1	51479	broad.mit.edu	37	17	4098995	4098995	+	Intron	SNP	C	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD30A	91074	broad.mit.edu	37	10	37422904	37422904	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD30A	91074	broad.mit.edu	37	10	37423001	37423001	+	Intron	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD30A	91074	broad.mit.edu	37	10	37430832	37430832	+	Missense_Mutation	SNP	C	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD30A	91074	broad.mit.edu	37	10	37508196	37508196	+	Missense_Mutation	SNP	C	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKS1B	56899	broad.mit.edu	37	12	99640276	99640276	+	Missense_Mutation	SNP	C	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANXA11	311	broad.mit.edu	37	10	81930651	81930651	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APC	324	broad.mit.edu	37	5	112178162	112178162	+	Nonsense_Mutation	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP19	84986	broad.mit.edu	37	10	99024633	99024633	+	Missense_Mutation	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARL15	54622	broad.mit.edu	37	5	53409207	53409207	+	Missense_Mutation	SNP	T	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASPM	259266	broad.mit.edu	37	1	197062239	197062239	+	Missense_Mutation	SNP	A	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATAD3A	55210	broad.mit.edu	37	1	1455541	1455541	+	Nonsense_Mutation	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATF2	1386	broad.mit.edu	37	2	175939623	175939623	+	Intron	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATF6	22926	broad.mit.edu	37	1	161829921	161829921	+	Intron	SNP	A	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATM	472	broad.mit.edu	37	11	108206578	108206578	+	Missense_Mutation	SNP	G	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP13A3	79572	broad.mit.edu	37	3	194181231	194181231	+	Intron	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP5A1	498	broad.mit.edu	37	18	43666068	43666068	+	Intron	SNP	G	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6AP1	537	broad.mit.edu	37	X	153663860	153663860	+	Intron	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP8A1	10396	broad.mit.edu	37	4	42524130	42524130	+	Intron	SNP	A	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATRN	8455	broad.mit.edu	37	20	3529977	3529977	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AVL9	23080	broad.mit.edu	37	7	32801177	32801177	+	Intron	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
B3GNT3	10331	broad.mit.edu	37	19	17922725	17922725	+	Missense_Mutation	SNP	G	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
B4GALNT2	124872	broad.mit.edu	37	17	47247054	47247054	+	Silent	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAIAP2L1	55971	broad.mit.edu	37	7	97922811	97922811	+	3'UTR	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAZ2A	11176	broad.mit.edu	37	12	56992465	56992465	+	Silent	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCR	613	broad.mit.edu	37	22	23616074	23616074	+	Intron	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BLOC1S2	282991	broad.mit.edu	37	10	102035226	102035226	+	Missense_Mutation	SNP	T	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BLZF1	8548	broad.mit.edu	37	1	169356319	169356319	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BOC	91653	broad.mit.edu	37	3	112991383	112991383	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf107	219621	broad.mit.edu	37	10	63450314	63450314	+	Missense_Mutation	SNP	C	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf12	26148	broad.mit.edu	37	10	98741603	98741603	+	Silent	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf183	196913	broad.mit.edu	37	14	50559428	50559428	+	5'Flank	SNP	T	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf51	196968	broad.mit.edu	37	15	100340131	100340131	+	RNA	SNP	A	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C16orf48	84080	broad.mit.edu	37	16	67698894	67698894	+	Intron	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf48	56985	broad.mit.edu	37	17	10614103	10614103	+	Intron	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C19orf18	147685	broad.mit.edu	37	19	58472678	58472678	+	Intron	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf116	79098	broad.mit.edu	37	1	207196009	207196010	+	Frame_Shift_Ins	INS	-	AC	AC			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf157	284573	broad.mit.edu	37	1	204006616	204006616	+	RNA	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf117	140710	broad.mit.edu	37	20	35433300	35433300	+	Silent	SNP	A	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf94	128710	broad.mit.edu	37	20	10536848	10536849	+	Intron	DNP	AG	TT	TT			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf51	200523	broad.mit.edu	37	2	88828513	88828513	+	Intron	SNP	G	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf40	401137	broad.mit.edu	37	4	71024672	71024672	+	Intron	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf167	253714	broad.mit.edu	37	6	97679434	97679434	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf58	79974	broad.mit.edu	37	7	120629802	120629802	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf65	401335	broad.mit.edu	37	7	47698471	47698471	+	Intron	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf117	286207	broad.mit.edu	37	9	130473488	130473488	+	Intron	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf91	203197	broad.mit.edu	37	9	117396045	117396045	+	Intron	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf93	203238	broad.mit.edu	37	9	15727767	15727767	+	Intron	SNP	T	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1F	778	broad.mit.edu	37	X	49071487	49071487	+	Intron	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAP1	10487	broad.mit.edu	37	1	40527403	40527403	+	Intron	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CARD8	22900	broad.mit.edu	37	19	48737602	48737602	+	Intron	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASD1	64921	broad.mit.edu	37	7	94162433	94162433	+	Intron	SNP	T	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASP8	841	broad.mit.edu	37	2	202149749	202149749	+	Missense_Mutation	SNP	C	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CATSPERG	57828	broad.mit.edu	37	19	38860671	38860671	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC136	64753	broad.mit.edu	37	7	128454821	128454821	+	Missense_Mutation	SNP	C	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC40	55036	broad.mit.edu	37	17	78071218	78071218	+	Intron	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC82	79780	broad.mit.edu	37	11	96117783	96117783	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC88B	283234	broad.mit.edu	37	11	64119538	64119538	+	Intron	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC96	257236	broad.mit.edu	37	4	7042892	7042892	+	3'UTR	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCT5	22948	broad.mit.edu	37	5	10256185	10256185	+	Missense_Mutation	SNP	G	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCT5	22948	broad.mit.edu	37	5	10256279	10256279	+	Intron	SNP	G	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCT5	22948	broad.mit.edu	37	5	10258364	10258364	+	Silent	SNP	G	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCT5	22948	broad.mit.edu	37	5	10258474	10258474	+	Intron	SNP	A	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCT5	22948	broad.mit.edu	37	5	10258515	10258515	+	Missense_Mutation	SNP	G	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCT5	22948	broad.mit.edu	37	5	10258621	10258621	+	Nonsense_Mutation	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD2AP	23607	broad.mit.edu	37	6	47501526	47501526	+	Intron	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD93	22918	broad.mit.edu	37	20	23066668	23066668	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC123	8872	broad.mit.edu	37	10	12272994	12272994	+	Missense_Mutation	SNP	A	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC5L	988	broad.mit.edu	37	6	44371578	44371578	+	Missense_Mutation	SNP	T	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH12	1010	broad.mit.edu	37	5	21752001	21752001	+	Missense_Mutation	SNP	T	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH12	1010	broad.mit.edu	37	5	21884218	21884218	+	Intron	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH1	999	broad.mit.edu	37	16	68842775	68842775	+	Intron	SNP	T	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH1	999	broad.mit.edu	37	16	68842791	68842791	+	Intron	SNP	T	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH20	28316	broad.mit.edu	37	18	59072164	59072164	+	Intron	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH23	64072	broad.mit.edu	37	10	73434908	73434908	+	Missense_Mutation	SNP	T	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH26	60437	broad.mit.edu	37	20	58545294	58545294	+	Intron	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK5RAP3	80279	broad.mit.edu	37	17	46054189	46054189	+	Splice_Site	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEACAM4	1089	broad.mit.edu	37	19	42126015	42126015	+	Intron	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CENPE	1062	broad.mit.edu	37	4	104061004	104061004	+	Missense_Mutation	SNP	T	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CENPL	91687	broad.mit.edu	37	1	173772116	173772116	+	Silent	SNP	A	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP135	9662	broad.mit.edu	37	4	56851592	56851592	+	Intron	SNP	T	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHID1	66005	broad.mit.edu	37	11	903105	903105	+	Missense_Mutation	SNP	A	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHSY1	22856	broad.mit.edu	37	15	101719204	101719204	+	Intron	SNP	G	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLASP1	23332	broad.mit.edu	37	2	122363412	122363412	+	Silent	SNP	T	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCA3P	9629	broad.mit.edu	37	1	87101784	87101784	+	RNA	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCN1	1180	broad.mit.edu	37	7	143020513	143020513	+	Intron	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLDN18	51208	broad.mit.edu	37	3	137717893	137717893	+	Silent	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC4A	50856	broad.mit.edu	37	12	8286793	8286793	+	Intron	SNP	C	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLIP2	7461	broad.mit.edu	37	7	73768246	73768246	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLK1	1195	broad.mit.edu	37	2	201722654	201722669	+	Intron	DEL	ATATACCTGATACCAC	-	-			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CMKLR1	1240	broad.mit.edu	37	12	108686093	108686093	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP2	26047	broad.mit.edu	37	7	147259538	147259538	+	Intron	SNP	T	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP2	26047	broad.mit.edu	37	7	147336165	147336165	+	Intron	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP2	26047	broad.mit.edu	37	7	147914548	147914548	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL15A1	1306	broad.mit.edu	37	9	101784552	101784552	+	Intron	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL24A1	255631	broad.mit.edu	37	1	86578303	86578303	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL29A1	256076	broad.mit.edu	37	3	130189814	130189814	+	Intron	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL2A1	1280	broad.mit.edu	37	12	48376795	48376795	+	Intron	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COMMD4	54939	broad.mit.edu	37	15	75631620	75631620	+	Missense_Mutation	SNP	T	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COX7B	1349	broad.mit.edu	37	X	77155192	77155192	+	Intron	SNP	C	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPS1	1373	broad.mit.edu	37	2	211507149	211507149	+	Intron	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPT1A	1374	broad.mit.edu	37	11	68566823	68566823	+	Missense_Mutation	SNP	A	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSE1L	1434	broad.mit.edu	37	20	47682795	47682795	+	Silent	SNP	T	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA2	1496	broad.mit.edu	37	2	80620477	80620477	+	Intron	SNP	C	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA3	29119	broad.mit.edu	37	10	69423434	69423434	+	Intron	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUL5	8065	broad.mit.edu	37	11	107904543	107904543	+	Nonsense_Mutation	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUX2	23316	broad.mit.edu	37	12	111772465	111772465	+	Silent	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXorf65	158830	broad.mit.edu	37	X	70326279	70326279	+	Intron	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP20A1	57404	broad.mit.edu	37	2	204131520	204131520	+	Intron	SNP	A	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP2A13	1553	broad.mit.edu	37	19	41596044	41596044	+	Nonsense_Mutation	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP2A7	1549	broad.mit.edu	37	19	41450829	41450829	+	Intron	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF8L1	139425	broad.mit.edu	37	X	27998579	27998579	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCTN1	1639	broad.mit.edu	37	2	74590188	74590189	+	Missense_Mutation	DNP	CT	AA	AA			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDR2	4921	broad.mit.edu	37	1	162740216	162740216	+	Missense_Mutation	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX27	55661	broad.mit.edu	37	20	47853035	47853035	+	Missense_Mutation	SNP	A	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX31	64794	broad.mit.edu	37	9	135522364	135522364	+	Frame_Shift_Del	DEL	G	-	-			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKD	8527	broad.mit.edu	37	2	234375661	234375661	+	Intron	SNP	C	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKE	8526	broad.mit.edu	37	17	54926178	54926178	+	Missense_Mutation	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIO3	1735	broad.mit.edu	37	14	102028628	102028628	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLG3	1741	broad.mit.edu	37	X	69720818	69720818	+	Missense_Mutation	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLG5	9231	broad.mit.edu	37	10	79581303	79581303	+	Missense_Mutation	SNP	T	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLGAP4	22839	broad.mit.edu	37	20	35071389	35071389	+	Intron	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLX6	1750	broad.mit.edu	37	7	96637044	96637044	+	Silent	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMD	1756	broad.mit.edu	37	X	31241241	31241241	+	Intron	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11757475	11757475	+	Silent	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAI2	64446	broad.mit.edu	37	17	72310156	72310156	+	Intron	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC25-GNG10	552891	broad.mit.edu	37	9	114428955	114428955	+	Intron	SNP	A	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNM1	1759	broad.mit.edu	37	9	130982720	130982720	+	Intron	SNP	A	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNMT3B	1789	broad.mit.edu	37	20	31384940	31384940	+	Intron	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK8	81704	broad.mit.edu	37	9	304704	304704	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DST	667	broad.mit.edu	37	6	56462573	56462573	+	Nonsense_Mutation	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DST	667	broad.mit.edu	37	6	56467847	56467847	+	Intron	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DTNBP1	84062	broad.mit.edu	37	6	15663061	15663061	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DTX3	196403	broad.mit.edu	37	12	58000292	58000292	+	5'UTR	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUOX2	50506	broad.mit.edu	37	15	45396622	45396622	+	Intron	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
E2F7	144455	broad.mit.edu	37	12	77438638	77438638	+	Intron	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFCAB1	79645	broad.mit.edu	37	8	49647699	49647699	+	Silent	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF4A2	1974	broad.mit.edu	37	3	186504304	186504304	+	Missense_Mutation	SNP	C	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB6	2051	broad.mit.edu	37	7	142564139	142564139	+	Intron	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERCC6L	54821	broad.mit.edu	37	X	71424797	71424797	+	3'UTR	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ETAA1	54465	broad.mit.edu	37	2	67632126	67632126	+	Missense_Mutation	SNP	C	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ETV6	2120	broad.mit.edu	37	12	12264089	12264089	+	Intron	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOC4	60412	broad.mit.edu	37	7	132973716	132973716	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F11	2160	broad.mit.edu	37	4	187192968	187192968	+	Intron	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F5	2153	broad.mit.edu	37	1	169526011	169526011	+	Silent	SNP	G	T	T	rs144375278	by1000genomes	TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM41C	284593	broad.mit.edu	37	1	809381	809381	+	Intron	SNP	A	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM71B	153745	broad.mit.edu	37	5	156592455	156592455	+	Intron	SNP	T	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM76A	199870	broad.mit.edu	37	1	28081716	28081716	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM8A1	51439	broad.mit.edu	37	6	17600920	17600920	+	Missense_Mutation	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM8A1	51439	broad.mit.edu	37	6	17602746	17602746	+	Intron	SNP	A	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM92A3	403315	broad.mit.edu	37	4	183959036	183959036	+	RNA	SNP	G	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM9B	171483	broad.mit.edu	37	X	9000150	9000150	+	Intron	SNP	C	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCGR3A	2214	broad.mit.edu	37	1	161518298	161518298	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCGR3B	2215	broad.mit.edu	37	1	161599655	161599655	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGFRL1	53834	broad.mit.edu	37	4	1015986	1015986	+	Intron	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FKBP6	8468	broad.mit.edu	37	7	72754619	72754619	+	Intron	SNP	A	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLOT1	10211	broad.mit.edu	37	6	30698670	30698670	+	Intron	SNP	G	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FNDC3A	22862	broad.mit.edu	37	13	49761278	49761278	+	Nonsense_Mutation	SNP	G	T	T	rs140686831		TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSCB	84075	broad.mit.edu	37	14	44976337	44976337	+	Translation_Start_Site	SNP	A	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FUS	2521	broad.mit.edu	37	16	31202719	31202719	+	Splice_Site	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAB4	128954	broad.mit.edu	37	22	17472980	17472980	+	Silent	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRG2	2566	broad.mit.edu	37	5	161521111	161521111	+	Intron	SNP	A	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAD2	2572	broad.mit.edu	37	10	26582001	26582001	+	Intron	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALE	2582	broad.mit.edu	37	1	24125283	24125286	+	Intron	DEL	CAGA	-	-			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAS7	8522	broad.mit.edu	37	17	9850262	9850262	+	Silent	SNP	C	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GDA	9615	broad.mit.edu	37	9	74764526	74764526	+	Silent	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GINS4	84296	broad.mit.edu	37	8	41399491	41399491	+	Intron	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GJB1	2705	broad.mit.edu	37	X	70443955	70443955	+	Nonsense_Mutation	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLI2	2736	broad.mit.edu	37	2	121708681	121708681	+	Intron	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLRA2	2742	broad.mit.edu	37	X	14622528	14622528	+	Intron	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLRA2	2742	broad.mit.edu	37	X	14748448	14748448	+	Silent	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNB1	2782	broad.mit.edu	37	1	1722149	1722149	+	Intron	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNL3L	54552	broad.mit.edu	37	X	54558956	54558956	+	5'UTR	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNPAT	8443	broad.mit.edu	37	1	231403468	231403468	+	Silent	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLGA2	2801	broad.mit.edu	37	9	131029842	131029842	+	Intron	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GP2	2813	broad.mit.edu	37	16	20331722	20331722	+	Silent	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPD2	2820	broad.mit.edu	37	2	157425218	157425218	+	Intron	SNP	C	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIA2	2891	broad.mit.edu	37	4	158262733	158262733	+	Intron	SNP	C	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIN3A	116443	broad.mit.edu	37	9	104499870	104499870	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRLF1	2909	broad.mit.edu	37	19	47422497	47422497	+	Missense_Mutation	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRPR	2925	broad.mit.edu	37	X	16142311	16142311	+	Missense_Mutation	SNP	A	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUCA2B	2981	broad.mit.edu	37	1	42621102	42621102	+	Intron	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEPHL1	341208	broad.mit.edu	37	11	93844222	93844222	+	Missense_Mutation	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HGS	9146	broad.mit.edu	37	17	79650969	79650969	+	5'Flank	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HK1	3098	broad.mit.edu	37	10	71154657	71154657	+	Intron	SNP	T	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNMT	3176	broad.mit.edu	37	2	138722049	138722049	+	Intron	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSD17B14	51171	broad.mit.edu	37	19	49316528	49316528	+	Silent	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPA1L	3305	broad.mit.edu	37	6	31777944	31777944	+	Missense_Mutation	SNP	C	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFNG	3458	broad.mit.edu	37	12	68549337	68549337	+	Intron	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFT172	26160	broad.mit.edu	37	2	27668597	27668597	+	Intron	SNP	A	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGBP1	3476	broad.mit.edu	37	X	69366622	69366622	+	Missense_Mutation	SNP	A	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL20RB	53833	broad.mit.edu	37	3	136710636	136710636	+	Intron	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INSRR	3645	broad.mit.edu	37	1	156811127	156811127	+	Intron	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ISCU	23479	broad.mit.edu	37	12	108958090	108958090	+	Silent	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA7	3679	broad.mit.edu	37	12	56096921	56096921	+	Missense_Mutation	SNP	T	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA8	8516	broad.mit.edu	37	10	15655663	15655663	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA9	3680	broad.mit.edu	37	3	37725290	37725290	+	Intron	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITIH5L	347365	broad.mit.edu	37	X	54777845	54777845	+	Intron	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH8	131096	broad.mit.edu	37	3	19436596	19436596	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNJ3	3760	broad.mit.edu	37	2	155711649	155711649	+	Missense_Mutation	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCTD7	154881	broad.mit.edu	37	7	66104162	66104162	+	Silent	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KEAP1	9817	broad.mit.edu	37	19	10600238	10600238	+	Intron	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KEAP1	9817	broad.mit.edu	37	19	10600447	10600447	+	Missense_Mutation	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KERA	11081	broad.mit.edu	37	12	91449755	91449755	+	Missense_Mutation	SNP	G	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1109	84162	broad.mit.edu	37	4	123164149	123164149	+	Intron	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1409	57578	broad.mit.edu	37	14	94121688	94121688	+	Missense_Mutation	SNP	T	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1598	57698	broad.mit.edu	37	10	118713525	118713525	+	Intron	SNP	T	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA2018	205717	broad.mit.edu	37	3	113389016	113389016	+	Silent	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF19	124602	broad.mit.edu	37	17	72322631	72322631	+	Intron	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF19	124602	broad.mit.edu	37	17	72350682	72350682	+	Missense_Mutation	SNP	A	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF1A	547	broad.mit.edu	37	2	241722554	241722554	+	Intron	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF24	347240	broad.mit.edu	37	9	34255858	34255858	+	Silent	SNP	T	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF4A	24137	broad.mit.edu	37	X	69519117	69519118	+	Intron	DNP	CC	TT	TT			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHDC7A	127707	broad.mit.edu	37	1	18809312	18809312	+	Missense_Mutation	SNP	G	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLRD1	3824	broad.mit.edu	37	12	10462245	10462245	+	Missense_Mutation	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT2	3849	broad.mit.edu	37	12	53045393	53045393	+	Missense_Mutation	SNP	C	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT6B	3854	broad.mit.edu	37	12	52842654	52842654	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP19-3	337970	broad.mit.edu	37	21	31864110	31864110	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LENG8	114823	broad.mit.edu	37	19	54963275	54963275	+	Missense_Mutation	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIPG	9388	broad.mit.edu	37	18	47091826	47091826	+	Missense_Mutation	SNP	C	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LNPEP	4012	broad.mit.edu	37	5	96329658	96329658	+	Missense_Mutation	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC96610	96610	broad.mit.edu	37	22	23101312	23101312	+	Intron	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPA	4018	broad.mit.edu	37	6	161071266	161071266	+	Intron	SNP	T	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPPR4	9890	broad.mit.edu	37	1	99771138	99771138	+	Intron	SNP	A	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRCH1	23143	broad.mit.edu	37	13	47279229	47279229	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC18	474354	broad.mit.edu	37	10	50122229	50122229	+	5'UTR	SNP	T	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC37A3	374819	broad.mit.edu	37	17	62854865	62854865	+	Intron	SNP	T	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC4C	57689	broad.mit.edu	37	11	40136618	40136618	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LTB4R	1241	broad.mit.edu	37	14	24785095	24785095	+	Missense_Mutation	SNP	C	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LUC7L3	51747	broad.mit.edu	37	17	48821878	48821878	+	Intron	SNP	T	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LUZP1	7798	broad.mit.edu	37	1	23417973	23417973	+	Nonsense_Mutation	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MACF1	23499	broad.mit.edu	37	1	39838415	39838415	+	Intron	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP2K4	6416	broad.mit.edu	37	17	12044436	12044436	+	Intron	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K1	4214	broad.mit.edu	37	5	56174953	56174954	+	Intron	DNP	TC	AT	AT			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAT2A	4144	broad.mit.edu	37	2	85770260	85770260	+	Intron	SNP	A	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MBTPS1	8720	broad.mit.edu	37	16	84096830	84096833	+	Intron	DEL	CTCA	-	-			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCM6	4175	broad.mit.edu	37	2	136603753	136603753	+	Intron	SNP	G	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCTP2	55784	broad.mit.edu	37	15	94836784	94836784	+	Intron	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCTS1	28985	broad.mit.edu	37	X	119739399	119739399	+	Missense_Mutation	SNP	T	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED12	9968	broad.mit.edu	37	X	70349021	70349021	+	Missense_Mutation	SNP	A	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED12	9968	broad.mit.edu	37	X	70356611	70356611	+	Intron	SNP	G	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED13L	23389	broad.mit.edu	37	12	116418535	116418535	+	Intron	SNP	T	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEF2C	4208	broad.mit.edu	37	5	88024937	88024937	+	Intron	SNP	T	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MET	4233	broad.mit.edu	37	7	116417313	116417314	+	Intron	INS	-	TT	TT			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAM	8972	broad.mit.edu	37	7	141796116	141796116	+	Intron	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR886	100126299	broad.mit.edu	37	5	135416294	135416294	+	RNA	SNP	A	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MORC4	79710	broad.mit.edu	37	X	106204996	106204996	+	Intron	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOXD1	26002	broad.mit.edu	37	6	132641742	132641742	+	Intron	SNP	T	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9071203	9071203	+	Missense_Mutation	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC17	140453	broad.mit.edu	37	7	100701352	100701352	+	3'UTR	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC5B	727897	broad.mit.edu	37	11	1155683	1155683	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC7	4589	broad.mit.edu	37	4	71346522	71346522	+	Nonsense_Mutation	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYADM	91663	broad.mit.edu	37	19	54377186	54377186	+	Missense_Mutation	SNP	G	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYCBPAP	84073	broad.mit.edu	37	17	48603496	48603496	+	Silent	SNP	T	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYCBPAP	84073	broad.mit.edu	37	17	48605672	48605672	+	Intron	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH6	4624	broad.mit.edu	37	14	23851779	23851779	+	Intron	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH9	4627	broad.mit.edu	37	22	36723529	36723529	+	Silent	SNP	T	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYRIP	25924	broad.mit.edu	37	3	40223926	40223926	+	Intron	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV2	89797	broad.mit.edu	37	11	20066788	20066788	+	Silent	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDE1	54820	broad.mit.edu	37	16	15771720	15771720	+	Silent	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDRG1	10397	broad.mit.edu	37	8	134262579	134262579	+	Intron	SNP	C	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFKB2	4791	broad.mit.edu	37	10	104160336	104160336	+	Intron	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NHLH1	4807	broad.mit.edu	37	1	160340482	160340482	+	5'UTR	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NINL	22981	broad.mit.edu	37	20	25470571	25470571	+	Silent	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NKD1	85407	broad.mit.edu	37	16	50664759	50664759	+	Silent	SNP	A	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLN	57486	broad.mit.edu	37	5	65081746	65081746	+	Intron	DEL	T	-	-	rs76093113		TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP10	338322	broad.mit.edu	37	11	7981504	7981504	+	Missense_Mutation	SNP	A	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOC3L	64318	broad.mit.edu	37	10	96117824	96117824	+	Intron	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOL4	8715	broad.mit.edu	37	18	31538324	31538324	+	Missense_Mutation	SNP	C	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPC1L1	29881	broad.mit.edu	37	7	44553237	44553237	+	Missense_Mutation	SNP	T	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPNT	255743	broad.mit.edu	37	4	106863478	106863478	+	Missense_Mutation	SNP	A	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPR2	4882	broad.mit.edu	37	9	35802708	35802708	+	Intron	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRAP	4892	broad.mit.edu	37	10	115357597	115357597	+	Intron	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRBP1	29959	broad.mit.edu	37	2	27658099	27658099	+	Intron	DEL	G	-	-			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRG3	10718	broad.mit.edu	37	10	84733419	84733419	+	Intron	SNP	T	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTM	50863	broad.mit.edu	37	11	131240725	131240725	+	Missense_Mutation	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUBP2	10101	broad.mit.edu	37	16	1838029	1838029	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OC90	729330	broad.mit.edu	37	8	133036873	133036873	+	Missense_Mutation	SNP	T	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OCM2	4951	broad.mit.edu	37	7	97614378	97614378	+	Intron	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OGT	8473	broad.mit.edu	37	X	70764405	70764405	+	Intron	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10K2	391107	broad.mit.edu	37	1	158389737	158389737	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10T2	128360	broad.mit.edu	37	1	158368421	158368421	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T2	401992	broad.mit.edu	37	1	248616356	248616356	+	Silent	SNP	C	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5H15	403274	broad.mit.edu	37	3	97887972	97887972	+	Silent	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5W2	390148	broad.mit.edu	37	11	55681268	55681268	+	Missense_Mutation	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8H2	390151	broad.mit.edu	37	11	55872945	55872945	+	Missense_Mutation	SNP	G	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8K5	219453	broad.mit.edu	37	11	55927085	55927085	+	Missense_Mutation	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ORC2L	4999	broad.mit.edu	37	2	201785052	201785052	+	Silent	SNP	A	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTOA	146183	broad.mit.edu	37	16	21747771	21747771	+	Intron	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTOP2	92736	broad.mit.edu	37	17	72920942	72920944	+	In_Frame_Del	DEL	TGG	-	-			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OVCH1	341350	broad.mit.edu	37	12	29617436	29617436	+	Intron	DEL	T	-	-			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PACS1	55690	broad.mit.edu	37	11	65998230	65998230	+	Intron	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPSS1	9061	broad.mit.edu	37	4	108581103	108581103	+	Intron	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHAC1	56135	broad.mit.edu	37	5	140307479	140307479	+	Silent	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB13	56123	broad.mit.edu	37	5	140595778	140595778	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA11	56105	broad.mit.edu	37	5	140802658	140802658	+	Missense_Mutation	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGB4	8641	broad.mit.edu	37	5	140768714	140768714	+	Silent	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCLO	27445	broad.mit.edu	37	7	82387923	82387923	+	Nonsense_Mutation	SNP	T	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCLO	27445	broad.mit.edu	37	7	82784916	82784916	+	Silent	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCNP	57092	broad.mit.edu	37	3	101298713	101298713	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCNXL2	80003	broad.mit.edu	37	1	233394778	233394778	+	Missense_Mutation	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCSK5	5125	broad.mit.edu	37	9	78506251	78506251	+	Missense_Mutation	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCSK5	5125	broad.mit.edu	37	9	78686660	78686660	+	Missense_Mutation	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCSK5	5125	broad.mit.edu	37	9	78749075	78749075	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE11A	50940	broad.mit.edu	37	2	178684942	178684942	+	Intron	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEX12	5193	broad.mit.edu	37	17	33904426	33904426	+	Missense_Mutation	SNP	G	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGLYRP4	57115	broad.mit.edu	37	1	153317566	153317566	+	Intron	SNP	A	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHACTR2	9749	broad.mit.edu	37	6	144093267	144093267	+	Intron	SNP	T	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIAS2	9063	broad.mit.edu	37	18	44409662	44409662	+	Intron	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3C2B	5287	broad.mit.edu	37	1	204434554	204434554	+	Intron	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIKFYVE	200576	broad.mit.edu	37	2	209212732	209212732	+	Missense_Mutation	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIP5K1A	8394	broad.mit.edu	37	1	151219506	151219506	+	Intron	SNP	T	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIWIL2	55124	broad.mit.edu	37	8	22147846	22147846	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PJA2	9867	broad.mit.edu	37	5	108698478	108698478	+	Intron	SNP	T	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD1L2	114780	broad.mit.edu	37	16	81181822	81181823	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1L1	93035	broad.mit.edu	37	8	110461710	110461710	+	Missense_Mutation	SNP	A	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2G3	50487	broad.mit.edu	37	22	31536292	31536292	+	Missense_Mutation	SNP	C	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCB1	23236	broad.mit.edu	37	20	8755104	8755104	+	Intron	SNP	T	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCG2	5336	broad.mit.edu	37	16	81934172	81934172	+	Intron	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEC	5339	broad.mit.edu	37	8	144992968	144992968	+	Missense_Mutation	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHB2	55041	broad.mit.edu	37	2	131955375	131955375	+	Intron	SNP	T	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR2I	5438	broad.mit.edu	37	19	36604905	36604905	+	Intron	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR3A	11128	broad.mit.edu	37	10	79767754	79767754	+	Intron	SNP	C	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POR	5447	broad.mit.edu	37	7	75573219	75573219	+	Intron	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPAPDC1A	196051	broad.mit.edu	37	10	122278335	122278335	+	Intron	SNP	T	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRAMEF18	391003	broad.mit.edu	37	1	13695841	13695841	+	Missense_Mutation	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRAP1	118471	broad.mit.edu	37	10	135163597	135163597	+	Splice_Site	SNP	A	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKCD	5580	broad.mit.edu	37	3	53217356	53217356	+	Intron	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKD2	25865	broad.mit.edu	37	19	47207494	47207494	+	Missense_Mutation	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRL	5617	broad.mit.edu	37	6	22290656	22290656	+	Intron	SNP	T	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRMT7	54496	broad.mit.edu	37	16	68386106	68386106	+	Intron	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRMT8	56341	broad.mit.edu	37	12	3649868	3649868	+	Missense_Mutation	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PROK2	60675	broad.mit.edu	37	3	71830447	71830447	+	Intron	SNP	T	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRSS1	5644	broad.mit.edu	37	7	142460610	142460610	+	Intron	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSEN2	5664	broad.mit.edu	37	1	227071533	227071534	+	Frame_Shift_Ins	INS	-	CA	CA			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG8	440533	broad.mit.edu	37	19	43266869	43266869	+	Intron	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRN	5798	broad.mit.edu	37	2	220167274	220167274	+	Intron	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PUS10	150962	broad.mit.edu	37	2	61169700	61169700	+	Intron	SNP	G	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PWP1	11137	broad.mit.edu	37	12	108103034	108103034	+	Intron	SNP	T	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PXMP2	5827	broad.mit.edu	37	12	133266994	133266994	+	Intron	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
QDPR	5860	broad.mit.edu	37	4	17506088	17506088	+	Missense_Mutation	SNP	T	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RADIL	55698	broad.mit.edu	37	7	4874839	4874839	+	Missense_Mutation	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RALGAPB	57148	broad.mit.edu	37	20	37194169	37194169	+	Intron	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASGRF2	5924	broad.mit.edu	37	5	80388718	80388718	+	Missense_Mutation	SNP	T	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM34	23029	broad.mit.edu	37	1	235324699	235324699	+	5'Flank	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REG1A	5967	broad.mit.edu	37	2	79348846	79348846	+	Intron	SNP	G	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REXO2	25996	broad.mit.edu	37	11	114320783	114320783	+	3'UTR	SNP	A	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RG9MTD1	54931	broad.mit.edu	37	3	101283774	101283774	+	Missense_Mutation	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGL3	57139	broad.mit.edu	37	19	11512648	11512648	+	Intron	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RILP	83547	broad.mit.edu	37	17	1549747	1549747	+	Missense_Mutation	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROBO4	54538	broad.mit.edu	37	11	124763444	124763444	+	Intron	SNP	C	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROCK2	9475	broad.mit.edu	37	2	11484135	11484135	+	Missense_Mutation	SNP	A	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPA4	29935	broad.mit.edu	37	X	96139803	96139803	+	Missense_Mutation	SNP	A	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTDR1	27156	broad.mit.edu	37	22	23401887	23401887	+	Missense_Mutation	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR1	6261	broad.mit.edu	37	19	39076591	39076591	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SACM1L	22908	broad.mit.edu	37	3	45748446	45748446	+	Intron	SNP	A	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAGE1	55511	broad.mit.edu	37	X	134986617	134986617	+	Intron	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SALL4	57167	broad.mit.edu	37	20	50407847	50407847	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SALL4	57167	broad.mit.edu	37	20	50408823	50408823	+	Missense_Mutation	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCAI	286205	broad.mit.edu	37	9	127790688	127790688	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCAND3	114821	broad.mit.edu	37	6	28541412	28541412	+	Missense_Mutation	SNP	C	A	A	rs137872757	by1000genomes	TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN10A	6336	broad.mit.edu	37	3	38830506	38830506	+	Silent	SNP	C	G	G	rs139793167		TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN4A	6329	broad.mit.edu	37	17	62029071	62029071	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDK2	54549	broad.mit.edu	37	17	71375670	71375670	+	Missense_Mutation	SNP	C	T	T	rs143525062		TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDK2	54549	broad.mit.edu	37	17	71429966	71429966	+	Missense_Mutation	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC63	11231	broad.mit.edu	37	6	108218811	108218811	+	Intron	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SECISBP2	79048	broad.mit.edu	37	9	91943573	91943573	+	Splice_Site	SNP	A	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SELE	6401	broad.mit.edu	37	1	169696746	169696746	+	Intron	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA3G	56920	broad.mit.edu	37	3	52470040	52470040	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA4A	64218	broad.mit.edu	37	1	156130171	156130171	+	Intron	SNP	T	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA4F	10505	broad.mit.edu	37	2	74903002	74903002	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEPT5	5413	broad.mit.edu	37	22	19707502	19707502	+	Intron	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINB3	6317	broad.mit.edu	37	18	61322852	61322852	+	3'UTR	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINB3	6317	broad.mit.edu	37	18	61323171	61323171	+	Missense_Mutation	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFTPA1	653509	broad.mit.edu	37	10	81373955	81373955	+	3'UTR	DEL	A	-	-			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFTPB	6439	broad.mit.edu	37	2	85894692	85894692	+	Intron	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFXN2	118980	broad.mit.edu	37	10	104495567	104495567	+	Intron	SNP	A	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHANK2	22941	broad.mit.edu	37	11	70319292	70319293	+	Missense_Mutation	DNP	TG	AA	AA			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHMT2	6472	broad.mit.edu	37	12	57626877	57626877	+	Intron	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIPA1L1	26037	broad.mit.edu	37	14	72176135	72176135	+	Missense_Mutation	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SKIV2L2	23517	broad.mit.edu	37	5	54654399	54654399	+	Splice_Site	SNP	A	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC13A3	64849	broad.mit.edu	37	20	45241993	45241993	+	Intron	SNP	G	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC16A9	220963	broad.mit.edu	37	10	61413507	61413507	+	Missense_Mutation	SNP	T	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A8	9376	broad.mit.edu	37	11	62763436	62763436	+	Intron	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC23A3	151295	broad.mit.edu	37	2	220028231	220028231	+	Missense_Mutation	SNP	G	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC24A2	25769	broad.mit.edu	37	9	19786748	19786748	+	Silent	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A38	54977	broad.mit.edu	37	3	39438031	39438031	+	3'UTR	SNP	G	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC30A2	7780	broad.mit.edu	37	1	26369043	26369043	+	Missense_Mutation	SNP	G	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC30A6	55676	broad.mit.edu	37	2	32428306	32428306	+	Intron	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC34A1	6569	broad.mit.edu	37	5	176825294	176825294	+	3'UTR	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC35F3	148641	broad.mit.edu	37	1	234444774	234444774	+	Intron	SNP	A	G	G	rs78125816		TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC39A12	221074	broad.mit.edu	37	10	18276417	18276417	+	Missense_Mutation	SNP	A	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC41A2	84102	broad.mit.edu	37	12	105199029	105199029	+	Silent	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC47A1	55244	broad.mit.edu	37	17	19470020	19470020	+	Intron	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A2	6522	broad.mit.edu	37	7	150773267	150773267	+	Missense_Mutation	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A9	6536	broad.mit.edu	37	1	44463634	44463634	+	Missense_Mutation	SNP	C	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC8A3	6547	broad.mit.edu	37	14	70512629	70512629	+	3'UTR	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A2	6549	broad.mit.edu	37	2	103281707	103281707	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO2A1	6578	broad.mit.edu	37	3	133692486	133692486	+	Intron	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLFNL1	200172	broad.mit.edu	37	1	41482042	41482042	+	Intron	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNTG2	54221	broad.mit.edu	37	2	1093936	1093936	+	Missense_Mutation	SNP	A	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOBP	55084	broad.mit.edu	37	6	107854781	107854782	+	Missense_Mutation	DNP	GG	CT	CT			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS1	114815	broad.mit.edu	37	10	108377865	108377865	+	Intron	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORL1	6653	broad.mit.edu	37	11	121454124	121454124	+	Intron	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATA16	83893	broad.mit.edu	37	3	172642104	172642104	+	Missense_Mutation	SNP	T	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158585067	158585067	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158654955	158654955	+	Silent	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTB	6710	broad.mit.edu	37	14	65264598	65264598	+	Intron	SNP	T	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSX3	10214	broad.mit.edu	37	X	48213500	48213500	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST3GAL2	6483	broad.mit.edu	37	16	70432107	70432107	+	Missense_Mutation	SNP	C	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST6GALNAC2	10610	broad.mit.edu	37	17	74583259	74583259	+	5'Flank	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAC3	246329	broad.mit.edu	37	12	57638883	57638883	+	Intron	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK11	6794	broad.mit.edu	37	19	1220434	1220434	+	Missense_Mutation	SNP	A	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK32B	55351	broad.mit.edu	37	4	5400150	5400150	+	Intron	SNP	G	A	A	rs145677320	by1000genomes	TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SVIP	258010	broad.mit.edu	37	11	22848706	22848707	+	Intron	INS	-	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE2	23224	broad.mit.edu	37	14	64476634	64476634	+	Intron	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT10	341359	broad.mit.edu	37	12	33592339	33592339	+	Missense_Mutation	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT11	23208	broad.mit.edu	37	1	155829701	155829701	+	Intron	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TACR2	6865	broad.mit.edu	37	10	71168868	71168868	+	Intron	SNP	C	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAGLN2	8407	broad.mit.edu	37	1	159890120	159890120	+	Silent	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBCE	6905	broad.mit.edu	37	1	235600787	235600787	+	Nonsense_Mutation	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBL3	10607	broad.mit.edu	37	16	2025660	2025660	+	Silent	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCF7L2	6934	broad.mit.edu	37	10	114724537	114724537	+	Intron	SNP	A	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDRKH	11022	broad.mit.edu	37	1	151747048	151747048	+	Intron	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TECRL	253017	broad.mit.edu	37	4	65175490	65175490	+	Intron	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TECTA	7007	broad.mit.edu	37	11	121039328	121039328	+	Intron	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TET2	54790	broad.mit.edu	37	4	106156700	106156700	+	Missense_Mutation	SNP	G	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGM4	7047	broad.mit.edu	37	3	44945470	44945470	+	Silent	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THSD1	55901	broad.mit.edu	37	13	52952787	52952787	+	Missense_Mutation	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TH	7054	broad.mit.edu	37	11	2193058	2193058	+	5'Flank	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLL2	7093	broad.mit.edu	37	10	98145794	98145794	+	Intron	SNP	T	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TM9SF4	9777	broad.mit.edu	37	20	30732862	30732862	+	Intron	SNP	A	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMED10	10972	broad.mit.edu	37	14	75643092	75643092	+	Missense_Mutation	SNP	G	A	A	rs4929		TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM174	134288	broad.mit.edu	37	5	72469059	72469059	+	5'UTR	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM71	137835	broad.mit.edu	37	8	133771176	133771176	+	Intron	DEL	A	-	-			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNFRSF8	943	broad.mit.edu	37	1	12198222	12198222	+	Intron	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNRC18	84629	broad.mit.edu	37	7	5391678	5391678	+	Missense_Mutation	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNS1	7145	broad.mit.edu	37	2	218682516	218682516	+	Frame_Shift_Del	DEL	C	-	-			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAK1	22906	broad.mit.edu	37	3	42264897	42264897	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM1	4308	broad.mit.edu	37	15	31338468	31338468	+	Intron	SNP	A	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC25	83538	broad.mit.edu	37	17	40117580	40117580	+	3'UTR	DEL	A	-	-			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179610711	179610711	+	Silent	SNP	A	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TWISTNB	221830	broad.mit.edu	37	7	19738143	19738143	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE2MP1	606551	broad.mit.edu	37	16	34404281	34404281	+	RNA	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBOX5	22888	broad.mit.edu	37	20	3090608	3090608	+	3'UTR	SNP	C	A	A	rs11907671	by1000genomes	TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UPB1	51733	broad.mit.edu	37	22	24906633	24906633	+	Intron	SNP	A	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UPRT	139596	broad.mit.edu	37	X	74494131	74494131	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTP6	55813	broad.mit.edu	37	17	30228700	30228700	+	5'UTR	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	111440124	111440124	+	IGR	SNP	A	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	121380747	121380747	+	IGR	SNP	A	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	1813951	1813951	+	IGR	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49104455	49104455	+	IGR	SNP	A	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	50379852	50379852	+	IGR	SNP	T	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	56503890	56503890	+	IGR	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	71883478	71883478	+	IGR	SNP	C	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	127828640	127828640	+	IGR	SNP	A	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	33139600	33139600	+	IGR	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	43963899	43963899	+	IGR	SNP	T	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	76082709	76082709	+	IGR	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	79187369	79187369	+	IGR	SNP	C	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	52892209	52892209	+	IGR	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	79484808	79484808	+	IGR	SNP	T	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32621207	32621207	+	IGR	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33412940	33412940	+	IGR	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	19091391	19091392	+	IGR	DEL	AG	-	-			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	18151663	18151663	+	IGR	SNP	T	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	22551538	22551538	+	IGR	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	9389845	9389845	+	IGR	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149039651	149039652	+	IGR	DEL	TG	-	-			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	157029740	157029740	+	IGR	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	157680165	157680165	+	IGR	SNP	A	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	192216245	192216245	+	IGR	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	209406282	209406282	+	IGR	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	222436116	222436116	+	IGR	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	228823549	228823549	+	IGR	SNP	T	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	73571024	73571024	+	IGR	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	79903309	79903309	+	IGR	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	11181579	11181579	+	IGR	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	16350136	16350136	+	IGR	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	187867278	187867278	+	IGR	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	34065468	34065468	+	IGR	SNP	T	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91800374	91800374	+	IGR	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	12892204	12892204	+	IGR	SNP	T	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	183605813	183605813	+	IGR	SNP	G	A	A	rs112815111		TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	192873573	192873573	+	IGR	SNP	A	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	75378469	75378469	+	IGR	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	166586396	166586396	+	IGR	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	75843213	75843213	+	IGR	SNP	A	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	117114584	117114584	+	IGR	SNP	G	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	126506299	126506299	+	IGR	SNP	A	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	141276148	141276148	+	IGR	SNP	T	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	141276153	141276153	+	IGR	SNP	A	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	55135650	55135650	+	IGR	SNP	A	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	58441	58442	+	IGR	DNP	TT	CG	CG			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	67151738	67151738	+	IGR	SNP	G	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	75206396	75206396	+	IGR	SNP	A	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	46173127	46173127	+	IGR	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	88985640	88985640	+	IGR	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	159024241	159024241	+	IGR	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	16623544	16623544	+	IGR	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	57069824	57069824	+	IGR	SNP	G	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	57217442	57217442	+	IGR	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	62693419	62693419	+	IGR	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	47491026	47491026	+	IGR	SNP	C	A	A	rs112063828		TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	114099571	114099571	+	IGR	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	43600487	43600487	+	IGR	SNP	C	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	101034071	101034071	+	IGR	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	134808401	134808401	+	IGR	SNP	T	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	143923213	143923214	+	IGR	INS	-	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	85340243	85340243	+	IGR	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VBP1	7411	broad.mit.edu	37	X	154456586	154456586	+	Intron	SNP	A	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VCAM1	7412	broad.mit.edu	37	1	101188709	101188709	+	Silent	SNP	C	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VCAM1	7412	broad.mit.edu	37	1	101190142	101190143	+	Intron	DNP	TG	AA	AA			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VTI1A	143187	broad.mit.edu	37	10	114298101	114298101	+	Intron	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VWA3B	200403	broad.mit.edu	37	2	98851134	98851134	+	Missense_Mutation	SNP	A	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VWA5A	4013	broad.mit.edu	37	11	124012959	124012959	+	Intron	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR72	256764	broad.mit.edu	37	15	53889352	53889352	+	Missense_Mutation	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XYLT1	64131	broad.mit.edu	37	16	17232177	17232177	+	Intron	SNP	A	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YES1	7525	broad.mit.edu	37	18	743353	743353	+	Nonsense_Mutation	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YTHDF2	51441	broad.mit.edu	37	1	29069062	29069062	+	Missense_Mutation	SNP	A	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBBX	79740	broad.mit.edu	37	3	167035342	167035342	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZDHHC4	55146	broad.mit.edu	37	7	6628266	6628266	+	Missense_Mutation	SNP	C	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFC3H1	196441	broad.mit.edu	37	12	72029456	72029456	+	Intron	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFP2	80108	broad.mit.edu	37	5	178349610	178349610	+	Intron	SNP	T	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFR	51663	broad.mit.edu	37	5	32379244	32379244	+	Missense_Mutation	SNP	T	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMAT4	79698	broad.mit.edu	37	8	40532546	40532546	+	Intron	SNP	T	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF133	7692	broad.mit.edu	37	20	18296557	18296557	+	Silent	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF177	7730	broad.mit.edu	37	19	9491726	9491726	+	Intron	SNP	T	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF185	7739	broad.mit.edu	37	X	152087507	152087507	+	Intron	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF263	10127	broad.mit.edu	37	16	3340426	3340426	+	Missense_Mutation	SNP	C	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF318	24149	broad.mit.edu	37	6	43316154	43316154	+	Missense_Mutation	SNP	C	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF43	7594	broad.mit.edu	37	19	21990838	21990838	+	Missense_Mutation	SNP	T	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF479	90827	broad.mit.edu	37	7	57188140	57188140	+	Missense_Mutation	SNP	C	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF595	152687	broad.mit.edu	37	4	53546	53546	+	Intron	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF681	148213	broad.mit.edu	37	19	23927473	23927473	+	Silent	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF75A	7627	broad.mit.edu	37	16	3366835	3366835	+	Intron	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF804A	91752	broad.mit.edu	37	2	185803192	185803192	+	Silent	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZP4	57829	broad.mit.edu	37	1	238048822	238048822	+	Silent	SNP	C	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZPLD1	131368	broad.mit.edu	37	3	102157313	102157313	+	Intron	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZWINT	11130	broad.mit.edu	37	10	58119665	58119665	+	Intron	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	25425541	25425541	+	5'Flank	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	21730835	21730835	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	37263807	37263807	+	Missense_Mutation	SNP	A	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	76497900	76497900	+	RNA	SNP	T	C	C			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89975672	89975672	+	Intron	SNP	C	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90077737	90077737	+	Intron	SNP	C	T	T			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	100607778	100607778	+	RNA	SNP	T	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142498940	142498940	+	RNA	SNP	A	G	G			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	38407681	38407681	+	Intron	SNP	G	A	A			TCGA-49-4507-01A-01D-1265-08	TCGA-49-4507-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
