Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
A2BP1	54715	broad.mit.edu	37	16	7715096	7715096	+	Intron	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
A2ML1	144568	broad.mit.edu	37	12	9006870	9006870	+	Intron	SNP	C	T	T	rs112518877	by1000genomes	TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
A2M	2	broad.mit.edu	37	12	9260230	9260230	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AADACL4	343066	broad.mit.edu	37	1	12721835	12721835	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AARSD1	80755	broad.mit.edu	37	17	41107791	41107791	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AARSD1	80755	broad.mit.edu	37	17	41131390	41131390	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABAT	18	broad.mit.edu	37	16	8873339	8873339	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA10	10349	broad.mit.edu	37	17	67189812	67189812	+	Intron	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA7	10347	broad.mit.edu	37	19	1056968	1056968	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA9	10350	broad.mit.edu	37	17	66981140	66981140	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA9	10350	broad.mit.edu	37	17	67003762	67003762	+	Intron	SNP	T	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB11	8647	broad.mit.edu	37	2	169851962	169851962	+	Missense_Mutation	SNP	G	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB1	5243	broad.mit.edu	37	7	87179321	87179321	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB1	5243	broad.mit.edu	37	7	87190446	87190446	+	Intron	SNP	G	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB5	340273	broad.mit.edu	37	7	20691133	20691133	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB5	340273	broad.mit.edu	37	7	20762825	20762825	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC11	85320	broad.mit.edu	37	16	48248902	48248902	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC11	85320	broad.mit.edu	37	16	48256471	48256471	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC9	10060	broad.mit.edu	37	12	21958111	21958111	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC9	10060	broad.mit.edu	37	12	22012585	22012585	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC9	10060	broad.mit.edu	37	12	22035727	22035727	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCD2	225	broad.mit.edu	37	12	40012821	40012821	+	Missense_Mutation	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCF2	10061	broad.mit.edu	37	7	150923298	150923298	+	Intron	SNP	T	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCG2	9429	broad.mit.edu	37	4	89034589	89034589	+	Missense_Mutation	SNP	C	A	A	rs138606116	byFrequency;by1000genomes	TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABHD6	57406	broad.mit.edu	37	3	58252959	58252959	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACAA2	10449	broad.mit.edu	37	18	47340589	47340589	+	5'Flank	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACAD10	80724	broad.mit.edu	37	12	112185277	112185278	+	Intron	INS	-	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACAN	176	broad.mit.edu	37	15	89400720	89400720	+	Missense_Mutation	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACBD5	91452	broad.mit.edu	37	10	27499963	27499963	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACER3	55331	broad.mit.edu	37	11	76727691	76727691	+	Intron	SNP	A	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACOT11	26027	broad.mit.edu	37	1	55077179	55077179	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACOT2	10965	broad.mit.edu	37	14	74035938	74035938	+	5'UTR	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACOX2	8309	broad.mit.edu	37	3	58503019	58503019	+	Silent	SNP	C	A	A	rs144682871	byFrequency	TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACP6	51205	broad.mit.edu	37	1	147126436	147126436	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSL1	2180	broad.mit.edu	37	4	185709868	185709868	+	Silent	SNP	T	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSL4	2182	broad.mit.edu	37	X	108906561	108906561	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM1	116285	broad.mit.edu	37	16	20638604	20638604	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM2B	348158	broad.mit.edu	37	16	20548527	20548527	+	3'UTR	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTR1B	10120	broad.mit.edu	37	2	98274518	98274518	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTR2	10097	broad.mit.edu	37	2	65480775	65480775	+	Intron	SNP	T	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACVRL1	94	broad.mit.edu	37	12	52314696	52314696	+	3'UTR	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACY1	95	broad.mit.edu	37	3	52020577	52020577	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACY3	91703	broad.mit.edu	37	11	67412464	67412464	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM19	8728	broad.mit.edu	37	5	156915542	156915542	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106311618	106311618	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106405641	106405641	+	RNA	SNP	G	T	T	rs111671802		TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106725748	106725748	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106780469	106780469	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106815687	106815687	+	Intron	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106926819	106926819	+	Intron	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	107042533	107042533	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	107095316	107095316	+	RNA	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	107170118	107170118	+	RNA	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	107170439	107170439	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	107183954	107183954	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS12	81792	broad.mit.edu	37	5	33630891	33630891	+	Silent	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS13	11093	broad.mit.edu	37	9	136303068	136303068	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS16	170690	broad.mit.edu	37	5	5239830	5239830	+	Missense_Mutation	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS4	9507	broad.mit.edu	37	1	161161350	161161350	+	Nonsense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS4	9507	broad.mit.edu	37	1	161166467	161166467	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS6	11174	broad.mit.edu	37	5	64756275	64756275	+	Intron	SNP	A	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS9	56999	broad.mit.edu	37	3	64672373	64672373	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTSL3	57188	broad.mit.edu	37	15	84561633	84561634	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAR	103	broad.mit.edu	37	1	154557439	154557439	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAR	103	broad.mit.edu	37	1	154560548	154560548	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAR	103	broad.mit.edu	37	1	154560619	154560619	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY5	111	broad.mit.edu	37	3	123044354	123044354	+	Intron	SNP	G	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY5	111	broad.mit.edu	37	3	123166468	123166468	+	Missense_Mutation	SNP	C	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY6	112	broad.mit.edu	37	12	49162750	49162750	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY8	114	broad.mit.edu	37	8	131964088	131964088	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADC	113451	broad.mit.edu	37	1	33585801	33585801	+	3'UTR	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADRBK2	157	broad.mit.edu	37	22	26107113	26107113	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AEBP1	165	broad.mit.edu	37	7	44152583	44152583	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGPAT9	84803	broad.mit.edu	37	4	84515957	84515957	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHDC1	27245	broad.mit.edu	37	1	27878163	27878163	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK2	113146	broad.mit.edu	37	14	105409323	105409323	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK2	113146	broad.mit.edu	37	14	105409775	105409775	+	Missense_Mutation	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK2	113146	broad.mit.edu	37	14	105413593	105413593	+	Missense_Mutation	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHR	196	broad.mit.edu	37	7	17374587	17374587	+	Missense_Mutation	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKAP13	11214	broad.mit.edu	37	15	86278314	86278314	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKAP9	10142	broad.mit.edu	37	7	91714100	91714100	+	Intron	SNP	T	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKAP9	10142	broad.mit.edu	37	7	91729041	91729041	+	Missense_Mutation	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKNA	80709	broad.mit.edu	37	9	117139859	117139859	+	Intron	SNP	C	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKR1CL1	340811	broad.mit.edu	37	10	5227163	5227163	+	5'Flank	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH18A1	5832	broad.mit.edu	37	10	97388190	97388190	+	Nonsense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALG10B	144245	broad.mit.edu	37	12	38712204	38712204	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALG10	84920	broad.mit.edu	37	12	34177038	34177038	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALK	238	broad.mit.edu	37	2	29420529	29420529	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALK	238	broad.mit.edu	37	2	29519816	29519816	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALLC	55821	broad.mit.edu	37	2	3749887	3749887	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALPK3	57538	broad.mit.edu	37	15	85382918	85382918	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALPK3	57538	broad.mit.edu	37	15	85383197	85383197	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMBP	259	broad.mit.edu	37	9	116823280	116823280	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMOT	154796	broad.mit.edu	37	X	112021837	112021837	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMOT	154796	broad.mit.edu	37	X	112033791	112033791	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK1	286	broad.mit.edu	37	8	41542217	41542217	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK1	286	broad.mit.edu	37	8	41552783	41552783	+	Silent	SNP	C	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK2	287	broad.mit.edu	37	4	114279596	114279596	+	Silent	SNP	C	A	A	rs144939151		TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKFN1	162282	broad.mit.edu	37	17	54517674	54517674	+	Intron	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKH	56172	broad.mit.edu	37	5	14798087	14798087	+	Intron	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD19	138649	broad.mit.edu	37	9	95647319	95647319	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD19	138649	broad.mit.edu	37	9	95648272	95648272	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD20A3	441425	broad.mit.edu	37	9	67965193	67965194	+	Intron	INS	-	TTG	TTG	rs150724386	by1000genomes	TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD26	22852	broad.mit.edu	37	10	27389139	27389139	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD30A	91074	broad.mit.edu	37	10	37441153	37441153	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANP32E	81611	broad.mit.edu	37	1	150198994	150198994	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANXA9	8416	broad.mit.edu	37	1	150956835	150956835	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AOX1	316	broad.mit.edu	37	2	201477353	201477353	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AOX1	316	broad.mit.edu	37	2	201534297	201534297	+	Splice_Site	SNP	G	T	T	rs143972260		TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP3M2	10947	broad.mit.edu	37	8	42022898	42022898	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP3S1	1176	broad.mit.edu	37	5	115205814	115205814	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APBB1IP	54518	broad.mit.edu	37	10	26781461	26781461	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APCDD1L	164284	broad.mit.edu	37	20	57036509	57036509	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APC	324	broad.mit.edu	37	5	112102913	112102913	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOA1BP	128240	broad.mit.edu	37	1	156563889	156563889	+	3'UTR	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOBEC3H	164668	broad.mit.edu	37	22	39498048	39498048	+	Splice_Site	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AQP10	89872	broad.mit.edu	37	1	154295570	154295570	+	Silent	SNP	G	T	T	rs138299081		TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARFGEF2	10564	broad.mit.edu	37	20	47570224	47570224	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP10	79658	broad.mit.edu	37	4	148800576	148800576	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP12	94134	broad.mit.edu	37	10	32096561	32096561	+	3'UTR	SNP	T	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP17	55114	broad.mit.edu	37	16	24941997	24941997	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP20	57569	broad.mit.edu	37	11	110462822	110462822	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP25	9938	broad.mit.edu	37	2	69015194	69015194	+	Intron	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP26	23092	broad.mit.edu	37	5	142513549	142513549	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP30	257106	broad.mit.edu	37	1	161018298	161018298	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP30	257106	broad.mit.edu	37	1	161029315	161029315	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP31	57514	broad.mit.edu	37	3	119134031	119134031	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP32	9743	broad.mit.edu	37	11	128839603	128839603	+	Silent	SNP	G	T	T	rs79505038	by1000genomes	TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP36	158763	broad.mit.edu	37	X	130215718	130215718	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF11	9826	broad.mit.edu	37	1	156911843	156911843	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF11	9826	broad.mit.edu	37	1	156925534	156925534	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF1	9138	broad.mit.edu	37	19	42398702	42398702	+	Missense_Mutation	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARL5B	221079	broad.mit.edu	37	10	18948534	18948534	+	5'UTR	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARL9	132946	broad.mit.edu	37	4	57377510	57377510	+	Nonsense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARMC3	219681	broad.mit.edu	37	10	23235080	23235080	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARMC3	219681	broad.mit.edu	37	10	23244615	23244615	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARNT2	9915	broad.mit.edu	37	15	80806503	80806503	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARSK	153642	broad.mit.edu	37	5	94891012	94891012	+	Silent	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARSK	153642	broad.mit.edu	37	5	94919012	94919012	+	Intron	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASB2	51676	broad.mit.edu	37	14	94417297	94417297	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASPH	444	broad.mit.edu	37	8	62577896	62577896	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASPM	259266	broad.mit.edu	37	1	197102652	197102652	+	Silent	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN2	23245	broad.mit.edu	37	9	119943285	119943285	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASXL1	171023	broad.mit.edu	37	20	31021250	31021250	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATAD1	84896	broad.mit.edu	37	10	89574407	89574407	+	5'UTR	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATF6B	1388	broad.mit.edu	37	6	32095947	32095947	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATF6	22926	broad.mit.edu	37	1	161762110	161762110	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATF6	22926	broad.mit.edu	37	1	161823065	161823065	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATG16L1	55054	broad.mit.edu	37	2	234178661	234178661	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATG2B	55102	broad.mit.edu	37	14	96756080	96756080	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATG2B	55102	broad.mit.edu	37	14	96761554	96761554	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATM	472	broad.mit.edu	37	11	108127013	108127013	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP10A	57194	broad.mit.edu	37	15	25946978	25946978	+	Intron	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP10B	23120	broad.mit.edu	37	5	160061621	160061621	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP11B	23200	broad.mit.edu	37	3	182605291	182605291	+	Intron	DEL	G	-	-			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP13A3	79572	broad.mit.edu	37	3	194180178	194180178	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1A2	477	broad.mit.edu	37	1	160106831	160106831	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1A4	480	broad.mit.edu	37	1	160128798	160128798	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1A4	480	broad.mit.edu	37	1	160145943	160145943	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1A4	480	broad.mit.edu	37	1	160147258	160147258	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1A4	480	broad.mit.edu	37	1	160156142	160156142	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1B4	23439	broad.mit.edu	37	X	119509273	119509273	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2A1	487	broad.mit.edu	37	16	28914822	28914822	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP4A	495	broad.mit.edu	37	19	36049949	36049949	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP5A1	498	broad.mit.edu	37	18	43668094	43668096	+	In_Frame_Del	DEL	CAC	-	-			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6V0A4	50617	broad.mit.edu	37	7	138432380	138432380	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6V0D1	9114	broad.mit.edu	37	16	67472863	67472863	+	Intron	SNP	G	T	T	rs72650140		TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6V1C1	528	broad.mit.edu	37	8	104053281	104053281	+	Intron	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP7B	540	broad.mit.edu	37	13	52515216	52515216	+	Splice_Site	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP8B2	57198	broad.mit.edu	37	1	154306939	154306939	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP8B2	57198	broad.mit.edu	37	1	154313297	154313297	+	Intron	SNP	C	A	A	rs2297608	byFrequency	TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP8B2	57198	broad.mit.edu	37	1	154316291	154316291	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP9B	374868	broad.mit.edu	37	18	77013287	77013287	+	Intron	DEL	T	-	-			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATXN7L1	222255	broad.mit.edu	37	7	105516298	105516298	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATXN7	6314	broad.mit.edu	37	3	63968680	63968680	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AUH	549	broad.mit.edu	37	9	94118345	94118345	+	Intron	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AVIL	10677	broad.mit.edu	37	12	58207158	58207158	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AVL9	23080	broad.mit.edu	37	7	32598970	32598970	+	Missense_Mutation	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AXL	558	broad.mit.edu	37	19	41762530	41762530	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
B3GALTL	145173	broad.mit.edu	37	13	31858870	31858870	+	Silent	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
B4GALNT2	124872	broad.mit.edu	37	17	47218740	47218740	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BACH1	571	broad.mit.edu	37	21	30724120	30724120	+	RNA	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BACH2	60468	broad.mit.edu	37	6	90661490	90661490	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAG5	9529	broad.mit.edu	37	14	104026516	104026516	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAGE2	85319	broad.mit.edu	37	21	11029702	11029702	+	3'UTR	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAGE2	85319	broad.mit.edu	37	21	11058389	11058389	+	Intron	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAI3	577	broad.mit.edu	37	6	69728346	69728346	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAIAP3	8938	broad.mit.edu	37	16	1388961	1388961	+	Missense_Mutation	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAZ2A	11176	broad.mit.edu	37	12	57009183	57009183	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BBS12	166379	broad.mit.edu	37	4	123664927	123664927	+	Missense_Mutation	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BBS2	583	broad.mit.edu	37	16	56536502	56536502	+	Intron	SNP	T	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCAN	63827	broad.mit.edu	37	1	156617925	156617925	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCAS1	8537	broad.mit.edu	37	20	52645048	52645048	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCL6	604	broad.mit.edu	37	3	187440335	187440335	+	Missense_Mutation	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCL9	607	broad.mit.edu	37	1	147094120	147094120	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCL9	607	broad.mit.edu	37	1	147095806	147095806	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BEST3	144453	broad.mit.edu	37	12	70049062	70049062	+	Silent	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BIRC7	79444	broad.mit.edu	37	20	61871001	61871001	+	Intron	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMI1	648	broad.mit.edu	37	10	22616439	22616439	+	Intron	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMPER	168667	broad.mit.edu	37	7	33945373	33945373	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BOC	91653	broad.mit.edu	37	3	113003705	113003705	+	Missense_Mutation	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BOD1L	259282	broad.mit.edu	37	4	13571655	13571655	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BPTF	2186	broad.mit.edu	37	17	65850116	65850116	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRSK1	84446	broad.mit.edu	37	19	55805575	55805576	+	Intron	DEL	CC	-	-			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTBD11	121551	broad.mit.edu	37	12	108011012	108011012	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTN2A2	10385	broad.mit.edu	37	6	26391098	26391098	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf111	221060	broad.mit.edu	37	10	15138657	15138657	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf41	25758	broad.mit.edu	37	11	33628310	33628310	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf10	60314	broad.mit.edu	37	12	53696906	53696906	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf39	80763	broad.mit.edu	37	12	21679749	21679749	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf51	283450	broad.mit.edu	37	12	112638548	112638548	+	Nonsense_Mutation	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf51	283450	broad.mit.edu	37	12	112650362	112650362	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf118	55668	broad.mit.edu	37	14	76620803	76620803	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf159	80017	broad.mit.edu	37	14	91662698	91662698	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf19	280655	broad.mit.edu	37	14	35408902	35408902	+	5'Flank	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf49	161176	broad.mit.edu	37	14	95884073	95884073	+	3'UTR	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf93	60686	broad.mit.edu	37	14	23459213	23459213	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf2	23742	broad.mit.edu	37	15	24921349	24921349	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf33	196951	broad.mit.edu	37	15	49903457	49903457	+	Missense_Mutation	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf41	84529	broad.mit.edu	37	15	36909230	36909230	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf44	81556	broad.mit.edu	37	15	65890720	65890720	+	Silent	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf51	196968	broad.mit.edu	37	15	100332193	100332193	+	RNA	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C16orf48	84080	broad.mit.edu	37	16	67698919	67698919	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C16orf90	646174	broad.mit.edu	37	16	3546517	3546517	+	5'Flank	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf47	284083	broad.mit.edu	37	17	56620409	56620409	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf47	284083	broad.mit.edu	37	17	56621647	56621647	+	5'UTR	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf59	54785	broad.mit.edu	37	17	8092892	8092892	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C18orf34	374864	broad.mit.edu	37	18	30518004	30518004	+	Missense_Mutation	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C19orf26	255057	broad.mit.edu	37	19	1231322	1231322	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C19orf59	199675	broad.mit.edu	37	19	7743312	7743312	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1QC	714	broad.mit.edu	37	1	22974119	22974119	+	Missense_Mutation	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf106	55765	broad.mit.edu	37	1	200867491	200867491	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf146	388649	broad.mit.edu	37	1	92696862	92696862	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf14	81626	broad.mit.edu	37	1	182873667	182873667	+	Intron	SNP	T	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf173	127254	broad.mit.edu	37	1	75114798	75114798	+	Intron	SNP	A	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf182	128229	broad.mit.edu	37	1	156314498	156314498	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf192	257177	broad.mit.edu	37	1	161335431	161335431	+	Missense_Mutation	SNP	C	A	A	rs149688361	byFrequency	TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf25	81627	broad.mit.edu	37	1	185089567	185089567	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf49	84066	broad.mit.edu	37	1	178489999	178489999	+	Missense_Mutation	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf12	55184	broad.mit.edu	37	20	18374908	18374908	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf151	140893	broad.mit.edu	37	20	60990804	60990804	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf186	149954	broad.mit.edu	37	20	31672738	31672738	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf54	113278	broad.mit.edu	37	20	742374	742374	+	Nonsense_Mutation	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf55	343990	broad.mit.edu	37	2	99449371	99449371	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf65	130951	broad.mit.edu	37	2	74867433	74867433	+	5'UTR	SNP	A	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf89	129293	broad.mit.edu	37	2	85059360	85059360	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf43	55319	broad.mit.edu	37	4	164435125	164435125	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf50	389197	broad.mit.edu	37	4	5961051	5961051	+	3'UTR	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf42	65250	broad.mit.edu	37	5	37107688	37107688	+	3'UTR	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf42	65250	broad.mit.edu	37	5	37122497	37122497	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6	729	broad.mit.edu	37	5	41155107	41155107	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf105	84830	broad.mit.edu	37	6	11723709	11723709	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf130	221443	broad.mit.edu	37	6	41037717	41037717	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf182	285753	broad.mit.edu	37	6	109480120	109480120	+	Intron	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf16	10842	broad.mit.edu	37	7	31736867	31736867	+	Intron	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf25	79020	broad.mit.edu	37	7	42971888	42971888	+	5'Flank	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf43	55262	broad.mit.edu	37	7	99755171	99755171	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf51	222950	broad.mit.edu	37	7	100087213	100087213	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8orf33	65265	broad.mit.edu	37	8	146277896	146277896	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8orf34	116328	broad.mit.edu	37	8	69688721	69688721	+	Intron	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8orf76	84933	broad.mit.edu	37	8	124243670	124243670	+	Nonsense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8orf76	84933	broad.mit.edu	37	8	124243854	124243854	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf172	389813	broad.mit.edu	37	9	139740034	139740034	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CA14	23632	broad.mit.edu	37	1	150236032	150236032	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CA14	23632	broad.mit.edu	37	1	150236104	150236104	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CA4	762	broad.mit.edu	37	17	58236701	58236701	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1A	773	broad.mit.edu	37	19	13476185	13476185	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1B	774	broad.mit.edu	37	9	141006877	141006877	+	Missense_Mutation	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1B	774	broad.mit.edu	37	9	141010191	141010191	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1C	775	broad.mit.edu	37	12	2774822	2774822	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1C	775	broad.mit.edu	37	12	2788765	2788765	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1E	777	broad.mit.edu	37	1	181707488	181707488	+	Intron	SNP	A	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1E	777	broad.mit.edu	37	1	181731689	181731689	+	Intron	SNP	A	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA2D3	55799	broad.mit.edu	37	3	54676165	54676165	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNG3	10368	broad.mit.edu	37	16	24358105	24358105	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CADM2	253559	broad.mit.edu	37	3	85932618	85932618	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CADM3	57863	broad.mit.edu	37	1	159166863	159166863	+	Intron	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAD	790	broad.mit.edu	37	2	27463196	27463196	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAD	790	broad.mit.edu	37	2	27465515	27465515	+	Nonsense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALB1	793	broad.mit.edu	37	8	91090603	91090603	+	Nonsense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALCOCO1	57658	broad.mit.edu	37	12	54115380	54115380	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALCOCO1	57658	broad.mit.edu	37	12	54117619	54117619	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMK1D	57118	broad.mit.edu	37	10	12811563	12811563	+	Intron	SNP	G	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMK2A	815	broad.mit.edu	37	5	149636103	149636103	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMKV	79012	broad.mit.edu	37	3	49899660	49899660	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPN1	823	broad.mit.edu	37	11	64950964	64950964	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPN3	825	broad.mit.edu	37	15	42676731	42676731	+	Silent	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPN9	10753	broad.mit.edu	37	1	230933908	230933908	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CARD14	79092	broad.mit.edu	37	17	78172397	78172397	+	Intron	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CATSPERB	79820	broad.mit.edu	37	14	92058306	92058306	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CBLN2	147381	broad.mit.edu	37	18	70205952	70205952	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CBX5	23468	broad.mit.edu	37	12	54639997	54639997	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC132	55610	broad.mit.edu	37	7	92905527	92905527	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC146	57639	broad.mit.edu	37	7	76889647	76889647	+	Intron	SNP	T	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC19	25790	broad.mit.edu	37	1	159856448	159856448	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC19	25790	broad.mit.edu	37	1	159858268	159858268	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC28B	79140	broad.mit.edu	37	1	32670142	32670142	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC41	51134	broad.mit.edu	37	12	94761621	94761621	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC63	160762	broad.mit.edu	37	12	111291171	111291171	+	Intron	SNP	G	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC63	160762	broad.mit.edu	37	12	111317665	111317665	+	Intron	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC70	83446	broad.mit.edu	37	13	52439481	52439481	+	5'UTR	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCL3	6348	broad.mit.edu	37	17	34416670	34416670	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCNA1	8900	broad.mit.edu	37	13	37007250	37007250	+	Silent	SNP	C	A	A	rs149125997	byFrequency	TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCNB3	85417	broad.mit.edu	37	X	50051710	50051710	+	Missense_Mutation	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCNG2	901	broad.mit.edu	37	4	78079902	78079902	+	Intron	SNP	A	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCNO	10309	broad.mit.edu	37	5	54528249	54528249	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCR5	1234	broad.mit.edu	37	3	46415414	46415414	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCT3	7203	broad.mit.edu	37	1	156286994	156286994	+	Missense_Mutation	SNP	G	T	T	rs150397752		TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD109	135228	broad.mit.edu	37	6	74407275	74407275	+	Missense_Mutation	SNP	C	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD160	11126	broad.mit.edu	37	1	145696534	145696534	+	3'UTR	SNP	A	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD163L1	283316	broad.mit.edu	37	12	7522016	7522016	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD19	930	broad.mit.edu	37	16	28948897	28948897	+	Intron	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD19	930	broad.mit.edu	37	16	28949220	28949220	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD1C	911	broad.mit.edu	37	1	158261957	158261957	+	Nonsense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD1C	911	broad.mit.edu	37	1	158262417	158262417	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD1D	912	broad.mit.edu	37	1	158147092	158147092	+	5'Flank	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD200R1	131450	broad.mit.edu	37	3	112648454	112648454	+	Intron	SNP	T	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD200	4345	broad.mit.edu	37	3	112066342	112066342	+	Intron	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD244	51744	broad.mit.edu	37	1	160803827	160803827	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD300LB	124599	broad.mit.edu	37	17	72521911	72521911	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD300LF	146722	broad.mit.edu	37	17	72700976	72700976	+	Intron	SNP	T	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC42	998	broad.mit.edu	37	1	22416542	22416542	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDCP1	64866	broad.mit.edu	37	3	45127319	45127319	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDCP2	200008	broad.mit.edu	37	1	54606767	54606767	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH10	1008	broad.mit.edu	37	5	24535754	24535754	+	Intron	SNP	T	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH12	1010	broad.mit.edu	37	5	21882756	21882756	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH13	1012	broad.mit.edu	37	16	83781765	83781765	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH18	1016	broad.mit.edu	37	5	19747253	19747253	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH20	28316	broad.mit.edu	37	18	59174536	59174536	+	Intron	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH6	1004	broad.mit.edu	37	5	31316245	31316245	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH9	1007	broad.mit.edu	37	5	26881336	26881336	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDHR2	54825	broad.mit.edu	37	5	175995856	175995856	+	Intron	DEL	G	-	-			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK11B	984	broad.mit.edu	37	1	1572836	1572836	+	Missense_Mutation	SNP	C	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK11B	984	broad.mit.edu	37	1	1573191	1573191	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK13	8621	broad.mit.edu	37	7	40102462	40102462	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDKL3	51265	broad.mit.edu	37	5	133702193	133702193	+	Missense_Mutation	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDR1	1038	broad.mit.edu	37	X	139866206	139866206	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDR2	1039	broad.mit.edu	37	16	22360942	22360942	+	Intron	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEACAM1	634	broad.mit.edu	37	19	43031142	43031142	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEACAM20	125931	broad.mit.edu	37	19	45024797	45024797	+	Intron	SNP	G	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CENPF	1063	broad.mit.edu	37	1	214782037	214782037	+	Intron	SNP	C	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CENPJ	55835	broad.mit.edu	37	13	25457372	25457372	+	Silent	SNP	G	T	T	rs113239817		TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP110	11064	broad.mit.edu	37	9	123907181	123907181	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP110	11064	broad.mit.edu	37	9	123914818	123914818	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CES7	221223	broad.mit.edu	37	16	55880441	55880441	+	Silent	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFTR	1080	broad.mit.edu	37	7	117246826	117246826	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD1L	9557	broad.mit.edu	37	1	146757044	146757044	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD1L	9557	broad.mit.edu	37	1	146766190	146766190	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD6	84181	broad.mit.edu	37	20	40033674	40033674	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD6	84181	broad.mit.edu	37	20	40049532	40049532	+	Nonsense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD6	84181	broad.mit.edu	37	20	40161794	40161794	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD7	55636	broad.mit.edu	37	8	61773534	61773534	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHL1	10752	broad.mit.edu	37	3	431184	431184	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHN2	1124	broad.mit.edu	37	7	29548801	29548801	+	Intron	SNP	C	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHPF	79586	broad.mit.edu	37	2	220406483	220406483	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRM2	1129	broad.mit.edu	37	7	136700132	136700132	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRM2	1129	broad.mit.edu	37	7	136700754	136700754	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRNA9	55584	broad.mit.edu	37	4	40356179	40356179	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLASP1	23332	broad.mit.edu	37	2	122286256	122286256	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCNKA	1187	broad.mit.edu	37	1	16352615	16352615	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLDN4	1364	broad.mit.edu	37	7	73245979	73245979	+	Missense_Mutation	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC10A	10462	broad.mit.edu	37	17	6980038	6980038	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC18C	283971	broad.mit.edu	37	16	70070376	70070376	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC1B	51266	broad.mit.edu	37	12	10145967	10145967	+	Intron	SNP	T	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC1B	51266	broad.mit.edu	37	12	10151776	10151776	+	5'UTR	SNP	A	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC6A	93978	broad.mit.edu	37	12	8618352	8618352	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLIC5	53405	broad.mit.edu	37	6	45923087	45923087	+	Intron	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLNK	116449	broad.mit.edu	37	4	10542275	10542275	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLPB	81570	broad.mit.edu	37	11	72006461	72006461	+	Intron	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLRN1	7401	broad.mit.edu	37	3	150661561	150661561	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLTB	1212	broad.mit.edu	37	5	175843437	175843437	+	5'UTR	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CMTM5	116173	broad.mit.edu	37	14	23847727	23847727	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNGB3	54714	broad.mit.edu	37	8	87671499	87671499	+	Intron	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTLN	54875	broad.mit.edu	37	9	17395046	17395046	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN1	1272	broad.mit.edu	37	12	41386996	41386996	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN2	6900	broad.mit.edu	37	1	205039099	205039099	+	Missense_Mutation	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP2	26047	broad.mit.edu	37	7	146829627	146829627	+	Intron	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP2	26047	broad.mit.edu	37	7	146997282	146997282	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP5	129684	broad.mit.edu	37	2	125555924	125555924	+	Intron	SNP	G	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP5	129684	broad.mit.edu	37	2	125671991	125671991	+	3'UTR	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTROB	116840	broad.mit.edu	37	17	7851202	7851202	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COG7	91949	broad.mit.edu	37	16	23444923	23444923	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A2	1302	broad.mit.edu	37	6	33138235	33138235	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL12A1	1303	broad.mit.edu	37	6	75799864	75799864	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL14A1	7373	broad.mit.edu	37	8	121237318	121237318	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL16A1	1307	broad.mit.edu	37	1	32154451	32154451	+	Intron	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL1A2	1278	broad.mit.edu	37	7	94034181	94034181	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL22A1	169044	broad.mit.edu	37	8	139614239	139614239	+	Intron	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL23A1	91522	broad.mit.edu	37	5	177771830	177771830	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL27A1	85301	broad.mit.edu	37	9	117015371	117015371	+	Intron	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL27A1	85301	broad.mit.edu	37	9	117052426	117052426	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL27A1	85301	broad.mit.edu	37	9	117064344	117064344	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL27A1	85301	broad.mit.edu	37	9	117064506	117064506	+	Intron	SNP	C	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A3	50509	broad.mit.edu	37	19	10083744	10083744	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL7A1	1294	broad.mit.edu	37	3	48610750	48610750	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL7A1	1294	broad.mit.edu	37	3	48629362	48629362	+	Silent	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL9A1	1297	broad.mit.edu	37	6	70965127	70965127	+	Intron	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL9A1	1297	broad.mit.edu	37	6	70981372	70981372	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL9A1	1297	broad.mit.edu	37	6	71009653	71009653	+	Intron	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COPA	1314	broad.mit.edu	37	1	160260560	160260560	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COPA	1314	broad.mit.edu	37	1	160261566	160261566	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COPA	1314	broad.mit.edu	37	1	160261591	160261591	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COPA	1314	broad.mit.edu	37	1	160265864	160265864	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COPA	1314	broad.mit.edu	37	1	160267547	160267547	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COPA	1314	broad.mit.edu	37	1	160269007	160269007	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COPA	1314	broad.mit.edu	37	1	160269047	160269047	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COQ5	84274	broad.mit.edu	37	12	120954501	120954501	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CORIN	10699	broad.mit.edu	37	4	47746498	47746498	+	Nonsense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CORO2B	10391	broad.mit.edu	37	15	69011816	69011816	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COX15	1355	broad.mit.edu	37	10	101478327	101478327	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPB2	1361	broad.mit.edu	37	13	46679112	46679112	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPE	1363	broad.mit.edu	37	4	166405652	166405652	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPSF3L	54973	broad.mit.edu	37	1	1260006	1260006	+	5'UTR	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CR1L	1379	broad.mit.edu	37	1	207890954	207890954	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRNN	49860	broad.mit.edu	37	1	152383179	152383179	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CROCC	9696	broad.mit.edu	37	1	17229298	17229303	+	Intron	DEL	ATAATA	-	-	rs77418498		TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CROT	54677	broad.mit.edu	37	7	87027876	87027876	+	Silent	SNP	C	A	A	rs144430034		TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRP	1401	broad.mit.edu	37	1	159683824	159683824	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRTAM	56253	broad.mit.edu	37	11	122733081	122733081	+	Intron	SNP	G	A	A	rs140238905	by1000genomes	TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRTC2	200186	broad.mit.edu	37	1	153924904	153924904	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	2813189	2813189	+	Missense_Mutation	SNP	A	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD2	114784	broad.mit.edu	37	1	33987181	33987181	+	Intron	DEL	G	-	-			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113266449	113266449	+	Intron	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSNK1E	1454	broad.mit.edu	37	22	38694856	38694856	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSNK2A1P	283106	broad.mit.edu	37	11	11373607	11373607	+	Missense_Mutation	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSNK2A1P	283106	broad.mit.edu	37	11	11374340	11374340	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSPP1	79848	broad.mit.edu	37	8	68102872	68102872	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSRNP3	80034	broad.mit.edu	37	2	166533020	166533020	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSRP2BP	57325	broad.mit.edu	37	20	18142791	18142791	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CST1	1469	broad.mit.edu	37	20	23731242	23731242	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTAGE1	64693	broad.mit.edu	37	18	19999170	19999170	+	5'Flank	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTDP1	9150	broad.mit.edu	37	18	77470359	77470359	+	Silent	SNP	C	A	A	rs140645111	byFrequency;by1000genomes	TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA2	1496	broad.mit.edu	37	2	80801389	80801389	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUBN	8029	broad.mit.edu	37	10	17171077	17171078	+	Intron	INS	-	ATGG	ATGG			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUL3	8452	broad.mit.edu	37	2	225364088	225364088	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUL4B	8450	broad.mit.edu	37	X	119672569	119672569	+	Nonsense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUX1	1523	broad.mit.edu	37	7	101844717	101844717	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CWC25	54883	broad.mit.edu	37	17	36958280	36958280	+	3'UTR	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXCL6	6372	broad.mit.edu	37	4	74703004	74703004	+	Splice_Site	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYB5R4	51167	broad.mit.edu	37	6	84569410	84569410	+	5'UTR	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYFIP1	23191	broad.mit.edu	37	15	22999276	22999276	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP11B1	1584	broad.mit.edu	37	8	143956361	143956361	+	Intron	DEL	G	-	-			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP11B1	1584	broad.mit.edu	37	8	143958118	143958118	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP19A1	1588	broad.mit.edu	37	15	51507853	51507853	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP27A1	1593	broad.mit.edu	37	2	219674379	219674379	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP2B6	1555	broad.mit.edu	37	19	41522587	41522587	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP46A1	10858	broad.mit.edu	37	14	100173998	100173998	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP4F3	4051	broad.mit.edu	37	19	15769378	15769378	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP4F8	11283	broad.mit.edu	37	19	15739435	15739435	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP8B1	1582	broad.mit.edu	37	3	42917186	42917186	+	Silent	SNP	G	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYTH1	9267	broad.mit.edu	37	17	76677078	76677078	+	Missense_Mutation	SNP	C	A	A	rs142007379		TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DACT1	51339	broad.mit.edu	37	14	59112900	59112900	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAO	1610	broad.mit.edu	37	12	109286889	109286889	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAP3	7818	broad.mit.edu	37	1	155671913	155671913	+	Intron	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAP3	7818	broad.mit.edu	37	1	155706752	155706752	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAP3	7818	broad.mit.edu	37	1	155708002	155708002	+	Nonsense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAZL	1618	broad.mit.edu	37	3	16646700	16646700	+	Intron	SNP	C	A	A	rs150308411	by1000genomes	TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DBF4B	80174	broad.mit.edu	37	17	42825779	42825779	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF4L1	285429	broad.mit.edu	37	4	41984357	41984357	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF4L2	138009	broad.mit.edu	37	8	88885797	88885797	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF6	55827	broad.mit.edu	37	1	168014275	168014275	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF8	50717	broad.mit.edu	37	1	160188115	160188115	+	Missense_Mutation	SNP	C	A	A	rs142007100	byFrequency	TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF8	50717	broad.mit.edu	37	1	160188279	160188279	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF8	50717	broad.mit.edu	37	1	160252904	160252904	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCHS2	54798	broad.mit.edu	37	4	155250709	155250709	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCST1	149095	broad.mit.edu	37	1	155018567	155018567	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCST2	127579	broad.mit.edu	37	1	155001742	155001742	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCTD	1635	broad.mit.edu	37	4	183836721	183836721	+	Missense_Mutation	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDB1	1642	broad.mit.edu	37	11	61081431	61081431	+	Frame_Shift_Del	DEL	A	-	-			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDHD2	23259	broad.mit.edu	37	8	38109804	38109804	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEFB119	245932	broad.mit.edu	37	20	29977020	29977020	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND2A	27147	broad.mit.edu	37	7	140269489	140269489	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND4B	9909	broad.mit.edu	37	1	153910247	153910247	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND4C	55667	broad.mit.edu	37	9	19352393	19352393	+	Intron	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND5B	160518	broad.mit.edu	37	12	31540672	31540672	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEPDC5	9681	broad.mit.edu	37	22	32287165	32287165	+	Intron	SNP	A	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEPDC7	91614	broad.mit.edu	37	11	33047648	33047648	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DES	1674	broad.mit.edu	37	2	220284978	220284978	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKH	160851	broad.mit.edu	37	13	42734390	42734390	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKI	9162	broad.mit.edu	37	7	137304500	137304500	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX15	1665	broad.mit.edu	37	4	24585975	24585975	+	Silent	SNP	G	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX37	57647	broad.mit.edu	37	12	125467172	125467172	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX38	9785	broad.mit.edu	37	16	72130760	72130760	+	Silent	SNP	G	T	T	rs147413193		TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX57	90957	broad.mit.edu	37	2	39090540	39090540	+	Silent	SNP	G	T	T	rs114788980	by1000genomes	TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIAPH1	1729	broad.mit.edu	37	5	140958642	140958642	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIP2C	22982	broad.mit.edu	37	10	415327	415327	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIRAS3	9077	broad.mit.edu	37	1	68512651	68512651	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLG5	9231	broad.mit.edu	37	10	79628818	79628818	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLGAP2	9228	broad.mit.edu	37	8	1497409	1497409	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMBT1	1755	broad.mit.edu	37	10	124348440	124348440	+	Intron	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMD	1756	broad.mit.edu	37	X	32472826	32472826	+	Nonsense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMPK	1760	broad.mit.edu	37	19	46282585	46282585	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMRT3	58524	broad.mit.edu	37	9	990161	990161	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH10	196385	broad.mit.edu	37	12	124274524	124274524	+	Silent	SNP	G	T	T	rs148982654		TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH11	8701	broad.mit.edu	37	7	21599449	21599449	+	Intron	SNP	A	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH11	8701	broad.mit.edu	37	7	21640402	21640402	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH17	8632	broad.mit.edu	37	17	76503452	76503452	+	Splice_Site	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH2	146754	broad.mit.edu	37	17	7681483	7681483	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH5	1767	broad.mit.edu	37	5	13736032	13736032	+	Missense_Mutation	SNP	C	A	A	rs140380565		TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH5	1767	broad.mit.edu	37	5	13919219	13919219	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH7	56171	broad.mit.edu	37	2	196865350	196865350	+	Intron	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11656326	11656326	+	Intron	SNP	C	A	A	rs112150507		TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11778439	11778439	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC12	56521	broad.mit.edu	37	10	69571282	69571282	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC14	85406	broad.mit.edu	37	12	56188234	56188234	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNER	92737	broad.mit.edu	37	2	230231494	230231494	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNER	92737	broad.mit.edu	37	2	230231815	230231815	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNMT3L	29947	broad.mit.edu	37	21	45674639	45674639	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNPEP	23549	broad.mit.edu	37	2	220250940	220250940	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK10	55619	broad.mit.edu	37	2	225657959	225657959	+	Intron	SNP	T	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK2	1794	broad.mit.edu	37	5	169122951	169122951	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK3	1795	broad.mit.edu	37	3	51264674	51264674	+	Intron	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOPEY2	9980	broad.mit.edu	37	21	37623512	37623512	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOT1L	84444	broad.mit.edu	37	19	2226932	2226932	+	Missense_Mutation	SNP	G	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP10	57628	broad.mit.edu	37	2	116485436	116485436	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPYSL5	56896	broad.mit.edu	37	2	27121306	27121306	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DRD2	1813	broad.mit.edu	37	11	113286089	113286089	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DRD5	1816	broad.mit.edu	37	4	9785072	9785072	+	Silent	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DST	667	broad.mit.edu	37	6	56479107	56479107	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUOX2	50506	broad.mit.edu	37	15	45390187	45390187	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUOX2	50506	broad.mit.edu	37	15	45404832	45404832	+	Missense_Mutation	SNP	C	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP22	56940	broad.mit.edu	37	6	304532	304532	+	Intron	SNP	C	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP22	56940	broad.mit.edu	37	6	345854	345854	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP27	92235	broad.mit.edu	37	1	167095706	167095706	+	Missense_Mutation	SNP	C	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNC1H1	1778	broad.mit.edu	37	14	102453756	102453757	+	Intron	DNP	GG	TT	TT			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNC1H1	1778	broad.mit.edu	37	14	102483806	102483806	+	Silent	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNC1H1	1778	broad.mit.edu	37	14	102516802	102516802	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNC2LI1	51626	broad.mit.edu	37	2	44028893	44028893	+	Intron	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNLL1	8655	broad.mit.edu	37	12	120936037	120936037	+	3'UTR	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
E2F8	79733	broad.mit.edu	37	11	19251621	19251621	+	Intron	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EBF3	253738	broad.mit.edu	37	10	131666017	131666017	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ECM1	1893	broad.mit.edu	37	1	150483594	150483594	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ECM1	1893	broad.mit.edu	37	1	150484963	150484963	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ECM1	1893	broad.mit.edu	37	1	150485950	150485950	+	3'UTR	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EDARADD	128178	broad.mit.edu	37	1	236645688	236645688	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EDAR	10913	broad.mit.edu	37	2	109527319	109527319	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EDIL3	10085	broad.mit.edu	37	5	83680180	83680180	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EDN1	1906	broad.mit.edu	37	6	12290835	12290835	+	5'UTR	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EEF1A2	1917	broad.mit.edu	37	20	62128792	62128792	+	Intron	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EEF1G	1937	broad.mit.edu	37	11	62327811	62327812	+	Frame_Shift_Ins	INS	-	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFCAB5	374786	broad.mit.edu	37	17	28380486	28380486	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGLN3	112399	broad.mit.edu	37	14	34395180	34395180	+	Intron	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF1B	10289	broad.mit.edu	37	3	40351499	40351499	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF2AK2	5610	broad.mit.edu	37	2	37341881	37341881	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF2B4	8890	broad.mit.edu	37	2	27592271	27592271	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF2C4	192670	broad.mit.edu	37	1	36316599	36316599	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF4A3	9775	broad.mit.edu	37	17	78118070	78118070	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF4E3	317649	broad.mit.edu	37	3	71733846	71733846	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELAC2	60528	broad.mit.edu	37	17	12908230	12908230	+	Intron	SNP	T	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELFN2	114794	broad.mit.edu	37	22	37770245	37770245	+	Missense_Mutation	SNP	C	A	A	rs142330872		TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELMOD1	55531	broad.mit.edu	37	11	107521059	107521059	+	Splice_Site	SNP	A	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EMCN	51705	broad.mit.edu	37	4	101439078	101439078	+	5'UTR	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EML1	2009	broad.mit.edu	37	14	100380422	100380422	+	Intron	SNP	T	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EN1	2019	broad.mit.edu	37	2	119600613	119600613	+	Missense_Mutation	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENGASE	64772	broad.mit.edu	37	17	77073825	77073825	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENPEP	2028	broad.mit.edu	37	4	111482456	111482456	+	Intron	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EP400	57634	broad.mit.edu	37	12	132497649	132497649	+	Missense_Mutation	SNP	C	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB41L3	23136	broad.mit.edu	37	18	5419871	5419871	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA10	284656	broad.mit.edu	37	1	38186587	38186587	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA1	2041	broad.mit.edu	37	7	143092362	143092362	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA5	2044	broad.mit.edu	37	4	66270034	66270034	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA5	2044	broad.mit.edu	37	4	66361003	66361003	+	Intron	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA6	285220	broad.mit.edu	37	3	97439277	97439277	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA7	2045	broad.mit.edu	37	6	93968071	93968071	+	Intron	SNP	C	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA8	2046	broad.mit.edu	37	1	22924727	22924727	+	Intron	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB6	2051	broad.mit.edu	37	7	142562413	142562413	+	Missense_Mutation	SNP	C	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB6	2051	broad.mit.edu	37	7	142564649	142564649	+	Intron	SNP	T	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPPK1	83481	broad.mit.edu	37	8	144941610	144941610	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPPK1	83481	broad.mit.edu	37	8	144942172	144942172	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERBB2	2064	broad.mit.edu	37	17	37868114	37868114	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERBB3	2065	broad.mit.edu	37	12	56491620	56491620	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERBB4	2066	broad.mit.edu	37	2	212543799	212543799	+	Missense_Mutation	SNP	C	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERC2	26059	broad.mit.edu	37	3	56468741	56468741	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERCC6	2074	broad.mit.edu	37	10	50732718	50732718	+	Missense_Mutation	SNP	G	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERLIN2	11160	broad.mit.edu	37	8	37601926	37601926	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESYT1	23344	broad.mit.edu	37	12	56531422	56531422	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ETS1	2113	broad.mit.edu	37	11	128359340	128359340	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ETV1	2115	broad.mit.edu	37	7	14025799	14025799	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ETV3	2117	broad.mit.edu	37	1	157106152	157106152	+	5'UTR	SNP	C	A	A	rs2231852	byFrequency;by1000genomes	TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EVC	2121	broad.mit.edu	37	4	5785367	5785367	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXD3	54932	broad.mit.edu	37	9	140242512	140242512	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOC6B	23233	broad.mit.edu	37	2	73053107	73053107	+	5'UTR	SNP	C	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EYS	346007	broad.mit.edu	37	6	66204789	66204789	+	Missense_Mutation	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EZH2	2146	broad.mit.edu	37	7	148511172	148511172	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F13B	2165	broad.mit.edu	37	1	197029500	197029500	+	Missense_Mutation	SNP	G	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F5	2153	broad.mit.edu	37	1	169509982	169509982	+	Missense_Mutation	SNP	G	T	T	rs113768654	byFrequency	TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAF1	11124	broad.mit.edu	37	1	51048295	51048295	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAIM2	23017	broad.mit.edu	37	12	50294991	50294991	+	Missense_Mutation	SNP	C	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM102A	399665	broad.mit.edu	37	9	130710280	130710280	+	Intron	SNP	C	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM118B	79607	broad.mit.edu	37	11	126081626	126081626	+	5'UTR	DEL	G	-	-			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM126A	84668	broad.mit.edu	37	7	22999864	22999864	+	Intron	SNP	G	A	A	rs141187440	by1000genomes	TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM126A	84668	broad.mit.edu	37	7	23000883	23000883	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM135B	51059	broad.mit.edu	37	8	139190670	139190670	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM13C	220965	broad.mit.edu	37	10	61043080	61043080	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM179A	165186	broad.mit.edu	37	2	29268174	29268174	+	Intron	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM19A4	151647	broad.mit.edu	37	3	68934411	68934411	+	5'UTR	SNP	C	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM21A	387680	broad.mit.edu	37	10	51863825	51863825	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM21B	55747	broad.mit.edu	37	10	47919965	47919965	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM22D	728130	broad.mit.edu	37	10	89118066	89118066	+	Nonsense_Mutation	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM46A	55603	broad.mit.edu	37	6	82461570	82461570	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM47C	442444	broad.mit.edu	37	X	37027524	37027524	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM49B	51571	broad.mit.edu	37	8	130861443	130861443	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM5C	339479	broad.mit.edu	37	1	190067402	190067402	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM71B	153745	broad.mit.edu	37	5	156590559	156590559	+	Missense_Mutation	SNP	A	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM75A3	727830	broad.mit.edu	37	9	40702753	40702753	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM75A6	389730	broad.mit.edu	37	9	43629294	43629294	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM75A6	389730	broad.mit.edu	37	9	43629347	43629347	+	Intron	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM75A6	389730	broad.mit.edu	37	9	43630579	43630579	+	Silent	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM75C1	441452	broad.mit.edu	37	9	90537136	90537136	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM83D	81610	broad.mit.edu	37	20	37581170	37581170	+	3'UTR	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FANCD2	2177	broad.mit.edu	37	3	10089740	10089740	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FANCD2	2177	broad.mit.edu	37	3	10106319	10106319	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAR2	55711	broad.mit.edu	37	12	29464985	29464985	+	Intron	SNP	A	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAR2	55711	broad.mit.edu	37	12	29486519	29486519	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FARP1	10160	broad.mit.edu	37	13	99042251	99042251	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FARS2	10667	broad.mit.edu	37	6	5609942	5609942	+	Intron	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FARSA	2193	broad.mit.edu	37	19	13039755	13039755	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT1	2195	broad.mit.edu	37	4	187516905	187516905	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT1	2195	broad.mit.edu	37	4	187518025	187518025	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT1	2195	broad.mit.edu	37	4	187541782	187541782	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT2	2196	broad.mit.edu	37	5	150943133	150943133	+	Silent	SNP	T	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT3	120114	broad.mit.edu	37	11	92592184	92592184	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT4	79633	broad.mit.edu	37	4	126402914	126402914	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT4	79633	broad.mit.edu	37	4	126411157	126411157	+	Missense_Mutation	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBLN1	2192	broad.mit.edu	37	22	45929620	45929620	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO31	79791	broad.mit.edu	37	16	87380923	87380923	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXW10	10517	broad.mit.edu	37	17	18682180	18682180	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXW4	6468	broad.mit.edu	37	10	103436138	103436138	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCGR2A	2212	broad.mit.edu	37	1	161475931	161475931	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCGR3A	2214	broad.mit.edu	37	1	161518373	161518373	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCHO1	23149	broad.mit.edu	37	19	17893866	17893866	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRL3	115352	broad.mit.edu	37	1	157665123	157665123	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRL4	83417	broad.mit.edu	37	1	157550198	157550198	+	Intron	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRL5	83416	broad.mit.edu	37	1	157485555	157485555	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRL5	83416	broad.mit.edu	37	1	157489647	157489647	+	Intron	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRL5	83416	broad.mit.edu	37	1	157497308	157497308	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRL6	343413	broad.mit.edu	37	1	159779072	159779072	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRL6	343413	broad.mit.edu	37	1	159779245	159779245	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRL6	343413	broad.mit.edu	37	1	159779906	159779906	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGD4	121512	broad.mit.edu	37	12	32793151	32793151	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGF13	2258	broad.mit.edu	37	X	137715142	137715142	+	Missense_Mutation	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGGY	55277	broad.mit.edu	37	1	60125889	60125889	+	Splice_Site	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGG	2266	broad.mit.edu	37	4	155526028	155526028	+	Silent	SNP	C	A	A	rs148378804		TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FKBP15	23307	broad.mit.edu	37	9	115968933	115968966	+	Intron	DEL	CAGAAGTGGGAACAACAGTCATTCAGCCTCTAGG	-	-	rs60873544		TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FKBP7	51661	broad.mit.edu	37	2	179341714	179341714	+	Intron	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FKBP7	51661	broad.mit.edu	37	2	179343274	179343274	+	5'UTR	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLAD1	80308	broad.mit.edu	37	1	154962691	154962691	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG2	388698	broad.mit.edu	37	1	152325410	152325410	+	Nonsense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG2	388698	broad.mit.edu	37	1	152328546	152328546	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152275394	152275394	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152275730	152275730	+	Missense_Mutation	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152276597	152276597	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152279018	152279018	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152280365	152280365	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ44082	389762	broad.mit.edu	37	9	84562936	84562936	+	3'UTR	SNP	C	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ46321	389763	broad.mit.edu	37	9	84608134	84608134	+	Missense_Mutation	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLRT2	23768	broad.mit.edu	37	14	86089362	86089362	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLRT3	23767	broad.mit.edu	37	20	14307564	14307564	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLT1	2321	broad.mit.edu	37	13	28891526	28891526	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLT3	2322	broad.mit.edu	37	13	28609671	28609671	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMN1	342184	broad.mit.edu	37	15	33192154	33192154	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMN2	56776	broad.mit.edu	37	1	240306058	240306058	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMNL3	91010	broad.mit.edu	37	12	50047434	50047434	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMNL3	91010	broad.mit.edu	37	12	50047585	50047585	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMNL3	91010	broad.mit.edu	37	12	50059885	50059885	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMO2	2327	broad.mit.edu	37	1	171178118	171178118	+	3'UTR	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMOD	2331	broad.mit.edu	37	1	203225263	203225263	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMR1NB	158521	broad.mit.edu	37	X	147063138	147063138	+	Silent	SNP	C	T	T	rs141506256		TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FN1	2335	broad.mit.edu	37	2	216243981	216243981	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FNBP1	23048	broad.mit.edu	37	9	132719647	132719647	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FNDC1	84624	broad.mit.edu	37	6	159646576	159646576	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FNDC3B	64778	broad.mit.edu	37	3	171965470	171965470	+	Missense_Mutation	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXD4L1	200350	broad.mit.edu	37	2	114257395	114257395	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRAS1	80144	broad.mit.edu	37	4	79398895	79398895	+	Intron	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMPD2	143162	broad.mit.edu	37	10	49400636	49400636	+	Intron	SNP	A	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRY	10129	broad.mit.edu	37	13	32849248	32849248	+	Intron	SNP	G	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSCN3	29999	broad.mit.edu	37	7	127235911	127235911	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSD1L	83856	broad.mit.edu	37	9	108285393	108285393	+	Intron	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSTL5	56884	broad.mit.edu	37	4	162459318	162459318	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FTO	79068	broad.mit.edu	37	16	53859891	53859891	+	Missense_Mutation	SNP	G	T	T	rs143695616		TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FTO	79068	broad.mit.edu	37	16	54145824	54145824	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FTSJD2	23070	broad.mit.edu	37	6	37446174	37446174	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FUNDC2P2	388965	broad.mit.edu	37	2	84518026	84518026	+	Nonsense_Mutation	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FUS	2521	broad.mit.edu	37	16	31201000	31201000	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FUT7	2529	broad.mit.edu	37	9	139925491	139925491	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
G6PC2	57818	broad.mit.edu	37	2	169764212	169764212	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAA	2548	broad.mit.edu	37	17	78092446	78092446	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAB4	128954	broad.mit.edu	37	22	17445735	17445735	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABPB2	126626	broad.mit.edu	37	1	151070420	151070420	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRA6	2559	broad.mit.edu	37	5	161119185	161119185	+	Silent	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRD	2563	broad.mit.edu	37	1	1961209	1961209	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRG3	2567	broad.mit.edu	37	15	27586187	27586187	+	Intron	SNP	A	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRR2	2570	broad.mit.edu	37	6	89978928	89978928	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GARNL3	84253	broad.mit.edu	37	9	130149547	130149547	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAS6	2621	broad.mit.edu	37	13	114530109	114530109	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAS7	8522	broad.mit.edu	37	17	9885023	9885023	+	Intron	SNP	C	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GATAD2B	57459	broad.mit.edu	37	1	153785904	153785904	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GBAP1	2630	broad.mit.edu	37	1	155188162	155188162	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GBP4	115361	broad.mit.edu	37	1	89664366	89664366	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCC2	9648	broad.mit.edu	37	2	109069095	109069095	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCC2	9648	broad.mit.edu	37	2	109086135	109086135	+	Missense_Mutation	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCFC1	94104	broad.mit.edu	37	21	34136649	34136649	+	Intron	DEL	G	-	-			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCNT1	2650	broad.mit.edu	37	9	79117224	79117224	+	Translation_Start_Site	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCNT3	9245	broad.mit.edu	37	15	59911449	59911449	+	Missense_Mutation	SNP	C	A	A	rs149420777	by1000genomes	TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GDF7	151449	broad.mit.edu	37	2	20867364	20867364	+	Missense_Mutation	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GDPD4	220032	broad.mit.edu	37	11	76979488	76979488	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GDPD4	220032	broad.mit.edu	37	11	76982254	76982254	+	Nonsense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GFM2	84340	broad.mit.edu	37	5	74034397	74034397	+	Missense_Mutation	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GIMAP1	170575	broad.mit.edu	37	7	150417567	150417567	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GIMAP5	55340	broad.mit.edu	37	7	150439681	150439681	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GIT2	9815	broad.mit.edu	37	12	110426805	110426805	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GJA1	2697	broad.mit.edu	37	6	121768117	121768117	+	Nonsense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GJC2	57165	broad.mit.edu	37	1	228346748	228346748	+	Missense_Mutation	SNP	G	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLB1L2	89944	broad.mit.edu	37	11	134234322	134234322	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLI1	2735	broad.mit.edu	37	12	57864343	57864343	+	Missense_Mutation	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLYATL1	92292	broad.mit.edu	37	11	58714480	58714480	+	Intron	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GML	2765	broad.mit.edu	37	8	143922606	143922606	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNMT	27232	broad.mit.edu	37	6	42931461	42931461	+	3'UTR	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLGA2	2801	broad.mit.edu	37	9	131036296	131036296	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLGA9P	283796	broad.mit.edu	37	15	23261770	23261770	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GON4L	54856	broad.mit.edu	37	1	155784365	155784365	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GORASP2	26003	broad.mit.edu	37	2	171818188	171818188	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPAM	57678	broad.mit.edu	37	10	113935464	113935464	+	Nonsense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPAM	57678	broad.mit.edu	37	10	113941369	113941369	+	Intron	SNP	T	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPATCH2	55105	broad.mit.edu	37	1	217787488	217787488	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPCPD1	56261	broad.mit.edu	37	20	5556162	5556162	+	Missense_Mutation	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPD2	2820	broad.mit.edu	37	2	157427750	157427750	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR110	266977	broad.mit.edu	37	6	46977422	46977422	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR148	344561	broad.mit.edu	37	2	131487496	131487496	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR151	134391	broad.mit.edu	37	5	145894611	145894611	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR179	440435	broad.mit.edu	37	17	36485943	36485943	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR17	2840	broad.mit.edu	37	2	128408589	128408589	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR98	84059	broad.mit.edu	37	5	89933562	89933562	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPT2	84706	broad.mit.edu	37	16	46950456	46950456	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRAMD1B	57476	broad.mit.edu	37	11	123465532	123465532	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIA3	2892	broad.mit.edu	37	X	122537222	122537222	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIA4	2893	broad.mit.edu	37	11	105758306	105758306	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIK2	2898	broad.mit.edu	37	6	102372663	102372663	+	Intron	SNP	G	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIK2	2898	broad.mit.edu	37	6	102511944	102511944	+	Intron	SNP	C	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRK4	2868	broad.mit.edu	37	4	3040188	3040188	+	Missense_Mutation	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRK7	131890	broad.mit.edu	37	3	141535708	141535708	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM7	2917	broad.mit.edu	37	3	7620333	7620333	+	Silent	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRPEL2	134266	broad.mit.edu	37	5	148730431	148730431	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRP	2922	broad.mit.edu	37	18	56892617	56892617	+	Intron	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTPBP1	9567	broad.mit.edu	37	22	39121977	39121977	+	Intron	SNP	C	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUCA1C	9626	broad.mit.edu	37	3	108635059	108635059	+	Silent	SNP	C	A	A	rs138320383		TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUSBP1	728411	broad.mit.edu	37	5	21459494	21459494	+	5'Flank	SNP	T	C	C	rs114488641	by1000genomes	TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
H2AFY	9555	broad.mit.edu	37	5	134705031	134705031	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
H2BFWT	158983	broad.mit.edu	37	X	103268067	103268067	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
H3F3C	440093	broad.mit.edu	37	12	31944709	31944709	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAS1	3036	broad.mit.edu	37	19	52216704	52216704	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAX1	10456	broad.mit.edu	37	1	154246043	154246043	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAX1	10456	broad.mit.edu	37	1	154247852	154247852	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HBEGF	1839	broad.mit.edu	37	5	139722344	139722344	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HBP1	26959	broad.mit.edu	37	7	106840769	106840769	+	Intron	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HCN4	10021	broad.mit.edu	37	15	73616393	73616393	+	Intron	DEL	C	-	-			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC7	51564	broad.mit.edu	37	12	48191840	48191840	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC7	51564	broad.mit.edu	37	12	48191905	48191905	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC9	9734	broad.mit.edu	37	7	18705955	18705955	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDC	3067	broad.mit.edu	37	15	50544822	50544822	+	Missense_Mutation	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR5A	25938	broad.mit.edu	37	14	31789502	31789502	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HECTD1	25831	broad.mit.edu	37	14	31604167	31604167	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HECTD3	79654	broad.mit.edu	37	1	45469348	45469348	+	Missense_Mutation	SNP	A	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HECW2	57520	broad.mit.edu	37	2	197189859	197189859	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC2	8924	broad.mit.edu	37	15	28375744	28375744	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC2	8924	broad.mit.edu	37	15	28424305	28424305	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC2	8924	broad.mit.edu	37	15	28483300	28483300	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC5	51191	broad.mit.edu	37	4	89385027	89385027	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEXDC	284004	broad.mit.edu	37	17	80394975	80394975	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HGD	3081	broad.mit.edu	37	3	120352153	120352153	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HHAT	55733	broad.mit.edu	37	1	210686405	210686405	+	Intron	SNP	A	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIBCH	26275	broad.mit.edu	37	2	191184537	191184537	+	5'UTR	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIP1R	9026	broad.mit.edu	37	12	123345953	123345953	+	Missense_Mutation	SNP	C	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIP1	3092	broad.mit.edu	37	7	75172241	75172241	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIP1	3092	broad.mit.edu	37	7	75189008	75189008	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H2BA	255626	broad.mit.edu	37	6	25727536	25727536	+	3'UTR	SNP	G	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H2BC	8347	broad.mit.edu	37	6	26123895	26123895	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIVEP1	3096	broad.mit.edu	37	6	12015888	12015888	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIVEP2	3097	broad.mit.edu	37	6	143091192	143091192	+	Missense_Mutation	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HK1	3098	broad.mit.edu	37	10	71103615	71103615	+	Silent	SNP	C	A	A	rs149919826		TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HK2	3099	broad.mit.edu	37	2	75113686	75113686	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HLA-B	3106	broad.mit.edu	37	6	31256269	31256269	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNF1A	6927	broad.mit.edu	37	12	121437060	121437060	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNF1B	6928	broad.mit.edu	37	17	36093604	36093604	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOOK3	84376	broad.mit.edu	37	8	42761351	42761351	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXA3	3200	broad.mit.edu	37	7	27148287	27148287	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXA7	3204	broad.mit.edu	37	7	27194526	27194526	+	3'UTR	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXC4	3221	broad.mit.edu	37	12	54422171	54422171	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HPS3	84343	broad.mit.edu	37	3	148857880	148857880	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HPS4	89781	broad.mit.edu	37	22	26875203	26875203	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRASLS2	54979	broad.mit.edu	37	11	63327591	63327591	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRG	3273	broad.mit.edu	37	3	186389415	186389415	+	Missense_Mutation	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRNR	388697	broad.mit.edu	37	1	152188171	152188171	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRNR	388697	broad.mit.edu	37	1	152192778	152192778	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRNR	388697	broad.mit.edu	37	1	152195434	152195434	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HS3ST2	9956	broad.mit.edu	37	16	22926573	22926573	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HS3ST4	9951	broad.mit.edu	37	16	26044075	26044075	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSD17B7P2	158160	broad.mit.edu	37	10	38654366	38654366	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSF1	3297	broad.mit.edu	37	8	145532733	145532733	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPA12B	116835	broad.mit.edu	37	20	3728879	3728879	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPB9	94086	broad.mit.edu	37	17	40275062	40275062	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPH1	10808	broad.mit.edu	37	13	31735728	31735728	+	5'UTR	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTA	283902	broad.mit.edu	37	16	73126860	73126860	+	RNA	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTA	283902	broad.mit.edu	37	16	73127034	73127034	+	RNA	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTN3	3347	broad.mit.edu	37	4	70897652	70897652	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR1A	3350	broad.mit.edu	37	5	63256774	63256774	+	Missense_Mutation	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR3E	285242	broad.mit.edu	37	3	183818364	183818364	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFLTD1	160492	broad.mit.edu	37	12	25678952	25678952	+	Intron	SNP	A	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFLTD1	160492	broad.mit.edu	37	12	25706005	25706005	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFNA14	3448	broad.mit.edu	37	9	21209647	21209647	+	Intron	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFRD1	3475	broad.mit.edu	37	7	112112722	112112722	+	Intron	SNP	G	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFT52	51098	broad.mit.edu	37	20	42252616	42252616	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGF1	3479	broad.mit.edu	37	12	102796285	102796285	+	Nonstop_Mutation	SNP	C	A	A	rs115707403	byFrequency;by1000genomes	TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGFL3	388555	broad.mit.edu	37	19	46627156	46627156	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF9	57549	broad.mit.edu	37	1	159900160	159900160	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL12RB2	3595	broad.mit.edu	37	1	67796441	67796441	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL13	3596	broad.mit.edu	37	5	131993990	131993990	+	Missense_Mutation	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL18R1	8809	broad.mit.edu	37	2	102979110	102979110	+	5'UTR	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1F7	27178	broad.mit.edu	37	2	113671411	113671411	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL20RA	53832	broad.mit.edu	37	6	137323321	137323321	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL2RG	3561	broad.mit.edu	37	X	70329022	70329022	+	Intron	SNP	T	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL4R	3566	broad.mit.edu	37	16	27374557	27374557	+	Silent	SNP	A	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL4	3565	broad.mit.edu	37	5	132009745	132009745	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL6R	3570	broad.mit.edu	37	1	154407078	154407078	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL6R	3570	broad.mit.edu	37	1	154437502	154437502	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL7	3574	broad.mit.edu	37	8	79673047	79673047	+	Intron	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ILF2	3608	broad.mit.edu	37	1	153640110	153640110	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IMPDH1	3614	broad.mit.edu	37	7	128040030	128040030	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IMPG2	50939	broad.mit.edu	37	3	100961605	100961605	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INADL	10207	broad.mit.edu	37	1	62261224	62261224	+	Silent	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INHBA	3624	broad.mit.edu	37	7	41729272	41729272	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INHBE	83729	broad.mit.edu	37	12	57849974	57849974	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INS-IGF2	723961	broad.mit.edu	37	11	2182168	2182168	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INTS4	92105	broad.mit.edu	37	11	77705770	77705770	+	5'Flank	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPO8	10526	broad.mit.edu	37	12	30823979	30823979	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPP	3652	broad.mit.edu	37	1	46165685	46165685	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPW	3653	broad.mit.edu	37	15	25417902	25417902	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQCC	55721	broad.mit.edu	37	1	32672012	32672012	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQGAP3	128239	broad.mit.edu	37	1	156500998	156500998	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQGAP3	128239	broad.mit.edu	37	1	156532897	156532897	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQGAP3	128239	broad.mit.edu	37	1	156542351	156542351	+	5'UTR	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRAK3	11213	broad.mit.edu	37	12	66641794	66641794	+	Missense_Mutation	SNP	C	A	A	rs150402157		TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA10	8515	broad.mit.edu	37	1	145533110	145533110	+	Nonsense_Mutation	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA1	3672	broad.mit.edu	37	5	52145249	52145249	+	Missense_Mutation	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA4	3676	broad.mit.edu	37	2	182374253	182374253	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA9	3680	broad.mit.edu	37	3	37627016	37627016	+	Intron	SNP	C	A	A	rs149921887	by1000genomes	TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA9	3680	broad.mit.edu	37	3	37670703	37670703	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAD	3681	broad.mit.edu	37	16	31427890	31427891	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAE	3682	broad.mit.edu	37	17	3632951	3632951	+	Intron	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAL	3683	broad.mit.edu	37	16	30486638	30486638	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAM	3684	broad.mit.edu	37	16	31283128	31283128	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGB4	3691	broad.mit.edu	37	17	73726951	73726951	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGB6	3694	broad.mit.edu	37	2	161052001	161052001	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITIH1	3697	broad.mit.edu	37	3	52816028	52816028	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITIH5	80760	broad.mit.edu	37	10	7608423	7608423	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITIH5	80760	broad.mit.edu	37	10	7611545	7611545	+	Intron	SNP	T	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITIH5	80760	broad.mit.edu	37	10	7615250	7615250	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITLN1	55600	broad.mit.edu	37	1	160849191	160849191	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITPR1	3708	broad.mit.edu	37	3	4681163	4681163	+	Intron	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITPR2	3709	broad.mit.edu	37	12	26868352	26868352	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITSN1	6453	broad.mit.edu	37	21	35154269	35154269	+	Intron	SNP	C	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IWS1	55677	broad.mit.edu	37	2	128249591	128249591	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IWS1	55677	broad.mit.edu	37	2	128281334	128281334	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JAKMIP2	9832	broad.mit.edu	37	5	147019228	147019228	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JMJD1C	221037	broad.mit.edu	37	10	64950684	64950684	+	Silent	SNP	G	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JPH3	57338	broad.mit.edu	37	16	87678713	87678713	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JTB	10899	broad.mit.edu	37	1	153949471	153949471	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JUP	3728	broad.mit.edu	37	17	39912311	39912311	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KALRN	8997	broad.mit.edu	37	3	124160831	124160831	+	Nonsense_Mutation	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KANK1	23189	broad.mit.edu	37	9	732575	732575	+	Missense_Mutation	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KAT2A	2648	broad.mit.edu	37	17	40268990	40268990	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNB1	3745	broad.mit.edu	37	20	47989688	47989688	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH6	81033	broad.mit.edu	37	17	61601589	61601589	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNIP1	30820	broad.mit.edu	37	5	170159926	170159926	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNIP1	30820	broad.mit.edu	37	5	170160894	170160894	+	Missense_Mutation	SNP	T	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNJ10	3766	broad.mit.edu	37	1	160012200	160012200	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNJ12	3768	broad.mit.edu	37	17	21318834	21318834	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNK18	338567	broad.mit.edu	37	10	118969098	118969098	+	Missense_Mutation	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNMA1	3778	broad.mit.edu	37	10	78868234	78868234	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNN3	3782	broad.mit.edu	37	1	154705740	154705740	+	Intron	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNN3	3782	broad.mit.edu	37	1	154744825	154744825	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNN3	3782	broad.mit.edu	37	1	154821555	154821555	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNT2	343450	broad.mit.edu	37	1	196311317	196311318	+	Missense_Mutation	DNP	CC	AG	AG			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCTD2	23510	broad.mit.edu	37	17	73043644	73043644	+	Missense_Mutation	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCTD3	51133	broad.mit.edu	37	1	215793562	215793562	+	Missense_Mutation	SNP	G	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM4A	9682	broad.mit.edu	37	1	44169216	44169216	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDSR	2531	broad.mit.edu	37	18	61005993	61005993	+	Intron	SNP	T	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KHDRBS1	10657	broad.mit.edu	37	1	32503442	32503442	+	Silent	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KHNYN	23351	broad.mit.edu	37	14	24905207	24905207	+	Intron	SNP	C	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0240	23506	broad.mit.edu	37	6	42823608	42823608	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0319L	79932	broad.mit.edu	37	1	35906654	35906654	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0319L	79932	broad.mit.edu	37	1	35972379	35972379	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0467	23334	broad.mit.edu	37	1	43891306	43891306	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0467	23334	broad.mit.edu	37	1	43895518	43895518	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0528	9847	broad.mit.edu	37	12	22678520	22678520	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0556	23247	broad.mit.edu	37	16	27720169	27720169	+	Silent	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1109	84162	broad.mit.edu	37	4	123091739	123091739	+	5'Flank	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1109	84162	broad.mit.edu	37	4	123161126	123161126	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1161	57462	broad.mit.edu	37	9	34372354	34372354	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1210	57481	broad.mit.edu	37	X	118221112	118221112	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1211	57482	broad.mit.edu	37	4	57193876	57193876	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1244	57221	broad.mit.edu	37	6	138630049	138630049	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1274	27143	broad.mit.edu	37	10	72291202	72291202	+	Missense_Mutation	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1429	25962	broad.mit.edu	37	8	95501001	95501001	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1755	85449	broad.mit.edu	37	20	36852001	36852001	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1755	85449	broad.mit.edu	37	20	36869264	36869264	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF13B	23303	broad.mit.edu	37	8	29046016	29046016	+	Intron	SNP	T	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF17	57576	broad.mit.edu	37	1	21031415	21031415	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF19	124602	broad.mit.edu	37	17	72348812	72348812	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF1B	23095	broad.mit.edu	37	1	10327560	10327560	+	Silent	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF20A	10112	broad.mit.edu	37	5	137519858	137519858	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF21B	23046	broad.mit.edu	37	1	200957524	200957524	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF4B	285643	broad.mit.edu	37	5	154395071	154395071	+	Missense_Mutation	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF5C	3800	broad.mit.edu	37	2	149857288	149857288	+	Nonsense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF9	64147	broad.mit.edu	37	3	47308467	47308467	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIR3DL1	3811	broad.mit.edu	37	19	55331451	55331451	+	Silent	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIR3DL3	115653	broad.mit.edu	37	19	55246862	55246862	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIR3DX1	90011	broad.mit.edu	37	19	55046820	55046820	+	5'Flank	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIR3DX1	90011	broad.mit.edu	37	19	55048360	55048360	+	Silent	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIR3DX1	90011	broad.mit.edu	37	19	55048369	55048369	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLF3	51274	broad.mit.edu	37	4	38691482	38691482	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHDC5	57542	broad.mit.edu	37	12	27950603	27950603	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHDC9	126823	broad.mit.edu	37	1	161069502	161069502	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL36	79786	broad.mit.edu	37	16	84690537	84690537	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL5	51088	broad.mit.edu	37	4	39064576	39064576	+	Missense_Mutation	SNP	G	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KPRP	448834	broad.mit.edu	37	1	152732365	152732365	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRAS	3845	broad.mit.edu	37	12	25398284	25398284	+	Missense_Mutation	SNP	C	G	G	rs121913529		TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT23	25984	broad.mit.edu	37	17	39086439	39086439	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT38	8687	broad.mit.edu	37	17	39593787	39593787	+	Silent	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT6B	3854	broad.mit.edu	37	12	52841489	52841489	+	Intron	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT76	51350	broad.mit.edu	37	12	53166491	53166491	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT7	3855	broad.mit.edu	37	12	52627069	52627069	+	5'UTR	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT7	3855	broad.mit.edu	37	12	52627423	52627424	+	Intron	DNP	CG	TC	TC			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT85	3891	broad.mit.edu	37	12	52758833	52758833	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP10-4	386672	broad.mit.edu	37	21	45994249	45994249	+	Missense_Mutation	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP9-2	83899	broad.mit.edu	37	17	39383291	39383291	+	Missense_Mutation	SNP	C	G	G	rs145566824		TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KSR2	283455	broad.mit.edu	37	12	118199277	118199277	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
L1CAM	3897	broad.mit.edu	37	X	153133300	153133300	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAD1	3898	broad.mit.edu	37	1	201356059	201356059	+	Missense_Mutation	SNP	G	A	A	rs150517332		TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA2	3908	broad.mit.edu	37	6	129601234	129601234	+	Missense_Mutation	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA4	3910	broad.mit.edu	37	6	112469461	112469461	+	Missense_Mutation	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA4	3910	broad.mit.edu	37	6	112510338	112510338	+	Frame_Shift_Del	DEL	G	-	-	rs113248952		TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA4	3910	broad.mit.edu	37	6	112521398	112521398	+	Intron	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMB2	3913	broad.mit.edu	37	3	49159605	49159605	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMC3	10319	broad.mit.edu	37	9	133967011	133967011	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LARP4	113251	broad.mit.edu	37	12	50794879	50794879	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LARS2	23395	broad.mit.edu	37	3	45436077	45436077	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LARS2	23395	broad.mit.edu	37	3	45517811	45517811	+	Intron	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LASS2	29956	broad.mit.edu	37	1	150938739	150938739	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LASS2	29956	broad.mit.edu	37	1	150939206	150939206	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAT2	7462	broad.mit.edu	37	7	73637988	73637988	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAX1	54900	broad.mit.edu	37	1	203740074	203740074	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LBP	3929	broad.mit.edu	37	20	36993453	36993453	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LBP	3929	broad.mit.edu	37	20	36995374	36995374	+	Intron	SNP	G	T	T	rs73287213	by1000genomes	TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCA5L	150082	broad.mit.edu	37	21	40777865	40777865	+	Silent	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCE1E	353135	broad.mit.edu	37	1	152759848	152759848	+	Missense_Mutation	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCE2A	353139	broad.mit.edu	37	1	152671480	152671480	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCE2C	353140	broad.mit.edu	37	1	152648367	152648367	+	Intron	SNP	A	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCLAT1	253558	broad.mit.edu	37	2	30682519	30682519	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCMT1	51451	broad.mit.edu	37	16	25151492	25151492	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LDHB	3945	broad.mit.edu	37	12	21788499	21788499	+	Nonsense_Mutation	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEMD3	23592	broad.mit.edu	37	12	65609716	65609716	+	Intron	SNP	C	T	T	rs67750677		TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEPR	3953	broad.mit.edu	37	1	66081754	66081754	+	Missense_Mutation	SNP	T	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGI1	9211	broad.mit.edu	37	10	95518125	95518125	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGI2	55203	broad.mit.edu	37	4	25005381	25005381	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LHFPL3	375612	broad.mit.edu	37	7	104308387	104308387	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRA4	23547	broad.mit.edu	37	19	54845142	54845142	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRA6	79168	broad.mit.edu	37	19	54742891	54742891	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRB4	11006	broad.mit.edu	37	19	55177446	55177446	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIM2	3982	broad.mit.edu	37	19	51885706	51885706	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIMCH1	22998	broad.mit.edu	37	4	41689960	41689960	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIMS1	3987	broad.mit.edu	37	2	109297245	109297245	+	Intron	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIMS2	55679	broad.mit.edu	37	2	128396897	128396897	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIN54	132660	broad.mit.edu	37	4	83860646	83860646	+	Intron	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIPA	3988	broad.mit.edu	37	10	91005605	91005605	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIX1L	128077	broad.mit.edu	37	1	145487351	145487351	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMAN2L	81562	broad.mit.edu	37	2	97405754	97405754	+	Silent	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMBRD1	55788	broad.mit.edu	37	6	70415710	70415710	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMNB2	84823	broad.mit.edu	37	19	2438277	2438277	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMOD1	25802	broad.mit.edu	37	1	201915289	201915289	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMTK2	22853	broad.mit.edu	37	7	97823728	97823728	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC146481	146481	broad.mit.edu	37	16	34713682	34713682	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC146880	146880	broad.mit.edu	37	17	62746583	62746583	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC146880	146880	broad.mit.edu	37	17	62747987	62747987	+	RNA	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC200030	200030	broad.mit.edu	37	1	148252936	148252936	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC285780	285780	broad.mit.edu	37	6	6535554	6535554	+	Intron	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC349196	349196	broad.mit.edu	37	8	7215732	7215732	+	5'Flank	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC440040	440040	broad.mit.edu	37	11	49598361	49598361	+	Missense_Mutation	SNP	C	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC442421	442421	broad.mit.edu	37	9	66499741	66499741	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC644669	644669	broad.mit.edu	37	18	15323341	15323341	+	RNA	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC649330	649330	broad.mit.edu	37	1	12907643	12907643	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC654342	654342	broad.mit.edu	37	2	91843461	91843461	+	RNA	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC727924	727924	broad.mit.edu	37	15	22298346	22298346	+	Intron	SNP	G	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC728190	728190	broad.mit.edu	37	10	88994981	88994981	+	Intron	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOR	4014	broad.mit.edu	37	1	153233317	153233317	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPCAT1	79888	broad.mit.edu	37	5	1489938	1489938	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPHN2	23266	broad.mit.edu	37	1	82409162	82409162	+	Missense_Mutation	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPPR5	163404	broad.mit.edu	37	1	99358716	99358716	+	Intron	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPPR5	163404	broad.mit.edu	37	1	99358718	99358718	+	Intron	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPXN	9404	broad.mit.edu	37	11	58318706	58318706	+	Splice_Site	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRAT	9227	broad.mit.edu	37	4	155670222	155670222	+	Silent	SNP	G	T	T	rs146717374	byFrequency;by1000genomes	TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRCH3	84859	broad.mit.edu	37	3	197579412	197579412	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRCH4	4034	broad.mit.edu	37	7	100179882	100179882	+	Intron	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRIT2	340745	broad.mit.edu	37	10	85984284	85984284	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP10	26020	broad.mit.edu	37	14	23344725	23344725	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141004687	141004687	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141083285	141083285	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141201753	141201753	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141214099	141214100	+	Frame_Shift_Ins	INS	-	T	T	rs150113526	byFrequency;by1000genomes	TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141819845	141819845	+	Intron	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1	4035	broad.mit.edu	37	12	57590052	57590052	+	Missense_Mutation	SNP	G	C	C	rs144160982	byFrequency;by1000genomes	TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP2	4036	broad.mit.edu	37	2	170093517	170093517	+	Intron	SNP	A	T	T	rs77595542	byFrequency;by1000genomes	TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC16B	90668	broad.mit.edu	37	14	24530801	24530801	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC18	474354	broad.mit.edu	37	10	50121436	50121436	+	Intron	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC31	79782	broad.mit.edu	37	3	169557830	169557830	+	Silent	SNP	T	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC32	2615	broad.mit.edu	37	11	76372166	76372166	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC4B	94030	broad.mit.edu	37	19	51021718	51021718	+	Missense_Mutation	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC4C	57689	broad.mit.edu	37	11	40136344	40136344	+	Nonsense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC7	57554	broad.mit.edu	37	1	70518721	70518721	+	Missense_Mutation	SNP	C	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRIQ1	84125	broad.mit.edu	37	12	85521615	85521615	+	Missense_Mutation	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LTBP1	4052	broad.mit.edu	37	2	33572565	33572565	+	Silent	SNP	C	A	A	rs144093447		TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LTBP3	4054	broad.mit.edu	37	11	65308247	65308247	+	Intron	SNP	G	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LTF	4057	broad.mit.edu	37	3	46479431	46479431	+	Missense_Mutation	SNP	G	T	T	rs137886255		TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LUZP1	7798	broad.mit.edu	37	1	23420543	23420543	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LY6G6F	259215	broad.mit.edu	37	6	31685371	31685371	+	Missense_Mutation	SNP	G	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYAR	55646	broad.mit.edu	37	4	4283517	4283517	+	Nonsense_Mutation	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYPD6B	130576	broad.mit.edu	37	2	149925138	149925138	+	Intron	SNP	T	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYZL1	84569	broad.mit.edu	37	10	29599211	29599211	+	Intron	SNP	C	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYZL2	119180	broad.mit.edu	37	10	30900803	30900803	+	3'UTR	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYZL2	119180	broad.mit.edu	37	10	30915125	30915125	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MACF1	23499	broad.mit.edu	37	1	39696923	39696923	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MACF1	23499	broad.mit.edu	37	1	39929402	39929402	+	Intron	SNP	T	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MACROD2	140733	broad.mit.edu	37	20	15918146	15918146	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEB6	158809	broad.mit.edu	37	X	26212818	26212818	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGI1	9223	broad.mit.edu	37	3	65342517	65342517	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP2K3	5606	broad.mit.edu	37	17	21205438	21205438	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP2K3	5606	broad.mit.edu	37	17	21217467	21217467	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K13	9175	broad.mit.edu	37	3	185155400	185155400	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K4	4216	broad.mit.edu	37	6	161510238	161510238	+	Intron	SNP	G	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP4	4134	broad.mit.edu	37	3	47912407	47912407	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP6	4135	broad.mit.edu	37	11	75353801	75353801	+	Intron	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP7D2	256714	broad.mit.edu	37	X	20070999	20070999	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPK10	5602	broad.mit.edu	37	4	87080528	87080528	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPK9	5601	broad.mit.edu	37	5	179668120	179668120	+	Missense_Mutation	SNP	C	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCH1	55016	broad.mit.edu	37	4	164506983	164506983	+	Nonsense_Mutation	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARK1	4139	broad.mit.edu	37	1	220835588	220835588	+	3'UTR	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARVELD3	91862	broad.mit.edu	37	16	71668181	71668181	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MASP2	10747	broad.mit.edu	37	1	11105579	11105579	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAT2A	4144	broad.mit.edu	37	2	85769161	85769161	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MBLAC2	153364	broad.mit.edu	37	5	89757070	89757070	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCAT	27349	broad.mit.edu	37	22	43529315	43529315	+	Missense_Mutation	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCM7	4176	broad.mit.edu	37	7	99695276	99695276	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCM8	84515	broad.mit.edu	37	20	5935211	5935211	+	Intron	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCRS1	10445	broad.mit.edu	37	12	49953270	49953270	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDC1	9656	broad.mit.edu	37	6	30672849	30672849	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDGA2	161357	broad.mit.edu	37	14	47315174	47315174	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDH1	4190	broad.mit.edu	37	2	63833070	63833070	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDN1	23195	broad.mit.edu	37	6	90366263	90366263	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED13L	23389	broad.mit.edu	37	12	116424999	116424999	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED17	9440	broad.mit.edu	37	11	93528177	93528177	+	Missense_Mutation	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEIS2	4212	broad.mit.edu	37	15	37386720	37386720	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MELK	9833	broad.mit.edu	37	9	36633031	36633031	+	Intron	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEN1	4221	broad.mit.edu	37	11	64574664	64574664	+	Nonsense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAM	8972	broad.mit.edu	37	7	141786544	141786544	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAT5B	146664	broad.mit.edu	37	17	74936390	74936390	+	Intron	SNP	T	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIA3	375056	broad.mit.edu	37	1	222802876	222802876	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MID2	11043	broad.mit.edu	37	X	107084332	107084332	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR1269	100302177	broad.mit.edu	37	4	67142601	67142601	+	RNA	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR1324	100302212	broad.mit.edu	37	3	75679986	75679986	+	RNA	SNP	C	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR495	574453	broad.mit.edu	37	14	101500038	101500038	+	5'Flank	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR655	724025	broad.mit.edu	37	14	101515178	101515178	+	5'Flank	SNP	T	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MKI67	4288	broad.mit.edu	37	10	129906863	129906863	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MKL2	57496	broad.mit.edu	37	16	14280892	14280892	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL2	8085	broad.mit.edu	37	12	49432397	49432397	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL3	58508	broad.mit.edu	37	7	151944945	151944945	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL3	58508	broad.mit.edu	37	7	151945117	151945117	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLLT3	4300	broad.mit.edu	37	9	20365688	20365688	+	Missense_Mutation	SNP	G	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MME	4311	broad.mit.edu	37	3	154859751	154859751	+	Intron	DEL	C	-	-			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP19	4327	broad.mit.edu	37	12	56232336	56232336	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMRN1	22915	broad.mit.edu	37	4	90816474	90816474	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOCS1	4337	broad.mit.edu	37	6	39893559	39893559	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOGAT1	116255	broad.mit.edu	37	2	223559351	223559351	+	Intron	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPRIP	23164	broad.mit.edu	37	17	17083969	17083969	+	3'UTR	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPV17	4358	broad.mit.edu	37	2	27535925	27535925	+	Missense_Mutation	SNP	C	A	A	rs140992482		TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPL24	79590	broad.mit.edu	37	1	156707524	156707524	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPL24	79590	broad.mit.edu	37	1	156707813	156707813	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPL24	79590	broad.mit.edu	37	1	156708253	156708253	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPL3	11222	broad.mit.edu	37	3	131220327	131220327	+	Intron	SNP	C	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPL42	28977	broad.mit.edu	37	12	93870766	93870766	+	Missense_Mutation	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPS35	60488	broad.mit.edu	37	12	27877136	27877136	+	Intron	DEL	T	-	-			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPS5	64969	broad.mit.edu	37	2	95753274	95753274	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSI2	124540	broad.mit.edu	37	17	55478603	55478603	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSI2	124540	broad.mit.edu	37	17	55754428	55754428	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSTO1	55154	broad.mit.edu	37	1	155584473	155584473	+	3'UTR	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR12	54545	broad.mit.edu	37	5	32230269	32230269	+	Missense_Mutation	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR2	8898	broad.mit.edu	37	11	95569288	95569288	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTOR	2475	broad.mit.edu	37	1	11182170	11182170	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTR	4548	broad.mit.edu	37	1	237024487	237024487	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9017374	9017374	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9072450	9072451	+	Frame_Shift_Ins	INS	-	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUS81	80198	broad.mit.edu	37	11	65629749	65629749	+	Missense_Mutation	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUT	4594	broad.mit.edu	37	6	49409760	49409760	+	Intron	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MVP	9961	broad.mit.edu	37	16	29844966	29844966	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MXRA5	25878	broad.mit.edu	37	X	3243045	3243045	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MXRA5	25878	broad.mit.edu	37	X	3261706	3261706	+	Missense_Mutation	SNP	C	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYADML	151325	broad.mit.edu	37	2	33952183	33952183	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYBL1	4603	broad.mit.edu	37	8	67485669	67485669	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYCT1	80177	broad.mit.edu	37	6	153027361	153027361	+	Intron	SNP	T	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH10	4628	broad.mit.edu	37	17	8379070	8379070	+	3'UTR	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH11	4629	broad.mit.edu	37	16	15811172	15811172	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH13	8735	broad.mit.edu	37	17	10206531	10206531	+	Silent	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH14	79784	broad.mit.edu	37	19	50764901	50764901	+	Intron	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH15	22989	broad.mit.edu	37	3	108147322	108147322	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH1	4619	broad.mit.edu	37	17	10415792	10415792	+	Missense_Mutation	SNP	C	A	A	rs147072526	byFrequency;by1000genomes	TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH2	4620	broad.mit.edu	37	17	10440522	10440522	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH4	4622	broad.mit.edu	37	17	10355562	10355562	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH6	4624	broad.mit.edu	37	14	23851239	23851239	+	3'UTR	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH7B	57644	broad.mit.edu	37	20	33565716	33565716	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH7B	57644	broad.mit.edu	37	20	33575777	33575777	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH7	4625	broad.mit.edu	37	14	23892704	23892704	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYLK4	340156	broad.mit.edu	37	6	2679540	2679540	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYLK	4638	broad.mit.edu	37	3	123419314	123419314	+	Nonsense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO16	23026	broad.mit.edu	37	13	109475515	109475515	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO18A	399687	broad.mit.edu	37	17	27419898	27419898	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO18A	399687	broad.mit.edu	37	17	27420399	27420399	+	Missense_Mutation	SNP	T	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO18B	84700	broad.mit.edu	37	22	26168508	26168508	+	Intron	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO1A	4640	broad.mit.edu	37	12	57432273	57432273	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO1F	4542	broad.mit.edu	37	19	8595219	8595219	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO5C	55930	broad.mit.edu	37	15	52553383	52553383	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO6	4646	broad.mit.edu	37	6	76602220	76602220	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO7A	4647	broad.mit.edu	37	11	76873964	76873964	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYST3	7994	broad.mit.edu	37	8	41789793	41789793	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYST4	23522	broad.mit.edu	37	10	76784718	76784718	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYT1L	23040	broad.mit.edu	37	2	1926195	1926195	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYT1L	23040	broad.mit.edu	37	2	1983509	1983510	+	Missense_Mutation	DNP	GA	TT	TT			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NACA2	342538	broad.mit.edu	37	17	59668091	59668091	+	Nonsense_Mutation	SNP	C	A	A	rs148387940	byFrequency	TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NADSYN1	55191	broad.mit.edu	37	11	71202082	71202082	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAE1	8883	broad.mit.edu	37	16	66837013	66837013	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NALCN	259232	broad.mit.edu	37	13	101742367	101742367	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV3	89795	broad.mit.edu	37	12	78334765	78334765	+	Intron	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV3	89795	broad.mit.edu	37	12	78334793	78334793	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV3	89795	broad.mit.edu	37	12	78400496	78400496	+	Missense_Mutation	SNP	C	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV3	89795	broad.mit.edu	37	12	78522444	78522444	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBEAL1	65065	broad.mit.edu	37	2	204058503	204058503	+	Intron	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF10	100132406	broad.mit.edu	37	1	145311029	145311029	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF10	100132406	broad.mit.edu	37	1	145439966	145439966	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF10	100132406	broad.mit.edu	37	1	145579346	145579346	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF10	100132406	broad.mit.edu	37	1	145595095	145595095	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF10	100132406	broad.mit.edu	37	1	145608349	145608349	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF10	100132406	broad.mit.edu	37	1	146398242	146398242	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF1	55672	broad.mit.edu	37	1	16890489	16890489	+	3'UTR	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF1	55672	broad.mit.edu	37	1	16892189	16892189	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF1	55672	broad.mit.edu	37	1	16908028	16908028	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF9	400818	broad.mit.edu	37	1	144816652	144816652	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCAM2	4685	broad.mit.edu	37	21	22849572	22849572	+	Intron	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCAPD3	23310	broad.mit.edu	37	11	134090332	134090332	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCKAP1L	3071	broad.mit.edu	37	12	54936438	54936438	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCKAP5	344148	broad.mit.edu	37	2	133486355	133486355	+	Intron	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCOA1	8648	broad.mit.edu	37	2	24985567	24985567	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCOA3	8202	broad.mit.edu	37	20	46262884	46262884	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCOA3	8202	broad.mit.edu	37	20	46279830	46279830	+	Silent	SNP	G	A	A	rs147918555		TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCOA6	23054	broad.mit.edu	37	20	33338275	33338275	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCS1	23413	broad.mit.edu	37	9	132980007	132980007	+	Intron	SNP	A	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDN	4692	broad.mit.edu	37	15	23931737	23931737	+	Missense_Mutation	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDRG1	10397	broad.mit.edu	37	8	134296547	134296547	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDST4	64579	broad.mit.edu	37	4	115891729	115891729	+	Nonsense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDUFS1	4719	broad.mit.edu	37	2	206997805	206997805	+	Missense_Mutation	SNP	T	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDUFS2	4720	broad.mit.edu	37	1	161180140	161180140	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEB	4703	broad.mit.edu	37	2	152499151	152499151	+	Nonsense_Mutation	SNP	A	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEB	4703	broad.mit.edu	37	2	152554106	152554106	+	Silent	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NECAB3	63941	broad.mit.edu	37	20	32246519	32246519	+	Intron	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEDD1	121441	broad.mit.edu	37	12	97311450	97311450	+	Nonsense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEDD9	4739	broad.mit.edu	37	6	11190425	11190425	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEK6	10783	broad.mit.edu	37	9	127089651	127089651	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NELL2	4753	broad.mit.edu	37	12	44917199	44917199	+	Nonsense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NELL2	4753	broad.mit.edu	37	12	45209725	45209725	+	Intron	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEO1	4756	broad.mit.edu	37	15	73454676	73454676	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NES	10763	broad.mit.edu	37	1	156641484	156641484	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFATC3	4775	broad.mit.edu	37	16	68215447	68215447	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFIB	4781	broad.mit.edu	37	9	14150349	14150349	+	Intron	SNP	C	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFKB2	4791	broad.mit.edu	37	10	104157257	104157257	+	Intron	SNP	G	T	T	rs116607432	by1000genomes	TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFKB2	4791	broad.mit.edu	37	10	104159862	104159862	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NGLY1	55768	broad.mit.edu	37	3	25761683	25761683	+	Splice_Site	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NIT1	4817	broad.mit.edu	37	1	161088669	161088669	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NKX2-2	4821	broad.mit.edu	37	20	21492614	21492614	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLN	57486	broad.mit.edu	37	5	65054393	65054393	+	Splice_Site	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP5	126206	broad.mit.edu	37	19	56538872	56538872	+	Missense_Mutation	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOD1	10392	broad.mit.edu	37	7	30491930	30491930	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOL11	25926	broad.mit.edu	37	17	65735842	65735842	+	Intron	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOMO3	408050	broad.mit.edu	37	16	16337294	16337294	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPAS3	64067	broad.mit.edu	37	14	34269371	34269371	+	Missense_Mutation	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPHP4	261734	broad.mit.edu	37	1	6008261	6008261	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPIP	9284	broad.mit.edu	37	16	15029134	15029134	+	5'Flank	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPIP	9284	broad.mit.edu	37	16	15029136	15029136	+	5'Flank	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPIP	9284	broad.mit.edu	37	16	15045798	15045798	+	Silent	SNP	A	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPL	80896	broad.mit.edu	37	1	182787807	182787807	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPPA	4878	broad.mit.edu	37	1	11907172	11907172	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPTN	27020	broad.mit.edu	37	15	73865940	73865940	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPTX2	4885	broad.mit.edu	37	7	98254284	98254284	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPTXR	23467	broad.mit.edu	37	22	39224385	39224385	+	Missense_Mutation	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NQO1	1728	broad.mit.edu	37	16	69760152	69760152	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR1I3	9970	broad.mit.edu	37	1	161199615	161199615	+	Missense_Mutation	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR1I3	9970	broad.mit.edu	37	1	161200609	161200609	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR1I3	9970	broad.mit.edu	37	1	161201155	161201155	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR1I3	9970	broad.mit.edu	37	1	161206233	161206233	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR1I3	9970	broad.mit.edu	37	1	161207733	161207733	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR3C1	2908	broad.mit.edu	37	5	142675083	142675083	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR4A2	4929	broad.mit.edu	37	2	157186376	157186376	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRCAM	4897	broad.mit.edu	37	7	107866055	107866055	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSMAF	8439	broad.mit.edu	37	8	59498437	59498437	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSUN2	54888	broad.mit.edu	37	5	6611873	6611873	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSUN5	55695	broad.mit.edu	37	7	72717382	72717382	+	3'UTR	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTM	50863	broad.mit.edu	37	11	132177686	132177686	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTM	50863	broad.mit.edu	37	11	132180091	132180091	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTN4	59277	broad.mit.edu	37	12	96107010	96107010	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTSR1	4923	broad.mit.edu	37	20	61389565	61389565	+	Intron	SNP	G	A	A	rs79490068	by1000genomes	TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUCKS1	64710	broad.mit.edu	37	1	205687462	205687462	+	Silent	SNP	G	T	T	rs147721587	byFrequency	TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP155	9631	broad.mit.edu	37	5	37292071	37292071	+	Silent	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP160	23279	broad.mit.edu	37	11	47826139	47826139	+	Nonsense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP188	23511	broad.mit.edu	37	9	131760930	131760930	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP210L	91181	broad.mit.edu	37	1	153982511	153982511	+	Missense_Mutation	SNP	T	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF2B	728343	broad.mit.edu	37	X	101581355	101581355	+	Intron	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXT2	55916	broad.mit.edu	37	X	108785891	108785891	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OBP2B	29989	broad.mit.edu	37	9	136081314	136081314	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OBSCN	84033	broad.mit.edu	37	1	228479688	228479688	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OBSL1	23363	broad.mit.edu	37	2	220424129	220424129	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OCA2	4948	broad.mit.edu	37	15	28141700	28141700	+	Intron	SNP	G	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ2	57451	broad.mit.edu	37	5	167420138	167420138	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OLFM4	10562	broad.mit.edu	37	13	53602936	53602936	+	5'Flank	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OLFML2A	169611	broad.mit.edu	37	9	127572397	127572397	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPCML	4978	broad.mit.edu	37	11	132307167	132307167	+	Missense_Mutation	SNP	A	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPTN	10133	broad.mit.edu	37	10	13154491	13154491	+	Silent	SNP	G	T	T	rs144561412		TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10K1	391109	broad.mit.edu	37	1	158435743	158435743	+	Missense_Mutation	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10X1	128367	broad.mit.edu	37	1	158549455	158549456	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR13C5	138799	broad.mit.edu	37	9	107361415	107361415	+	Frame_Shift_Del	DEL	G	-	-			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR14A16	284532	broad.mit.edu	37	1	247978437	247978437	+	Missense_Mutation	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2A14	135941	broad.mit.edu	37	7	143826632	143826632	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2A2	442361	broad.mit.edu	37	7	143807187	143807187	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L13	284521	broad.mit.edu	37	1	248166475	248166475	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L13	284521	broad.mit.edu	37	1	248247877	248247877	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T10	127069	broad.mit.edu	37	1	248756792	248756792	+	Missense_Mutation	SNP	G	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4A5	81318	broad.mit.edu	37	11	51412108	51412108	+	Missense_Mutation	SNP	C	A	A	rs148710182		TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4C15	81309	broad.mit.edu	37	11	55322787	55322787	+	Silent	SNP	C	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4D10	390197	broad.mit.edu	37	11	59245022	59245022	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4D10	390197	broad.mit.edu	37	11	59245288	59245288	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4L1	122742	broad.mit.edu	37	14	20528323	20528323	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4N2	390429	broad.mit.edu	37	14	20295971	20295971	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5D16	390144	broad.mit.edu	37	11	55606473	55606473	+	Missense_Mutation	SNP	G	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5M11	219487	broad.mit.edu	37	11	56310560	56310560	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5T1	390155	broad.mit.edu	37	11	56044028	56044028	+	Missense_Mutation	SNP	G	C	C	rs143790336		TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5T3	390154	broad.mit.edu	37	11	56020494	56020494	+	Silent	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5W2	390148	broad.mit.edu	37	11	55681482	55681482	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6F1	343169	broad.mit.edu	37	1	247875557	247875557	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR7E5P	219445	broad.mit.edu	37	11	55747386	55747386	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR7G3	390883	broad.mit.edu	37	19	9236946	9236946	+	Silent	SNP	T	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8D4	338662	broad.mit.edu	37	11	123778066	123778066	+	Missense_Mutation	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8H3	390152	broad.mit.edu	37	11	55889816	55889816	+	5'Flank	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR9A2	135924	broad.mit.edu	37	7	142723406	142723406	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OS9	10956	broad.mit.edu	37	12	58110011	58110011	+	Intron	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OS9	10956	broad.mit.edu	37	12	58111706	58111706	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTOA	146183	broad.mit.edu	37	16	21728474	21728474	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTUD6A	139562	broad.mit.edu	37	X	69283212	69283212	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTUD7B	56957	broad.mit.edu	37	1	149915793	149915793	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTUD7B	56957	broad.mit.edu	37	1	149916538	149916538	+	Nonsense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTUD7B	56957	broad.mit.edu	37	1	149931640	149931640	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OVCH1	341350	broad.mit.edu	37	12	29630180	29630180	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OXER1	165140	broad.mit.edu	37	2	42990264	42990264	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P2RX7	5027	broad.mit.edu	37	12	121598766	121598766	+	Missense_Mutation	SNP	C	A	A	rs143722015	by1000genomes	TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P4HB	5034	broad.mit.edu	37	17	79801871	79801871	+	3'UTR	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P4HB	5034	broad.mit.edu	37	17	79804764	79804764	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P4HB	5034	broad.mit.edu	37	17	79804941	79804941	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PABPC1L	80336	broad.mit.edu	37	20	43545524	43545524	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PABPC1	26986	broad.mit.edu	37	8	101724686	101724686	+	Splice_Site	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PACRG	135138	broad.mit.edu	37	6	163483046	163483046	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAEP	5047	broad.mit.edu	37	9	138454302	138454302	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAM	5066	broad.mit.edu	37	5	102237031	102237031	+	Intron	SNP	T	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAM	5066	broad.mit.edu	37	5	102249819	102249819	+	Intron	SNP	A	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAOX	196743	broad.mit.edu	37	10	135202382	135202382	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPD5	64282	broad.mit.edu	37	16	50261809	50261809	+	Silent	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPPA2	60676	broad.mit.edu	37	1	176564612	176564612	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAQR3	152559	broad.mit.edu	37	4	79847797	79847806	+	Frame_Shift_Del	DEL	AATTGGGATG	-	-			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARN	5073	broad.mit.edu	37	16	14576651	14576651	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PASD1	139135	broad.mit.edu	37	X	150773091	150773091	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PASD1	139135	broad.mit.edu	37	X	150842789	150842789	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAX1	5075	broad.mit.edu	37	20	21695407	21695407	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAX4	5078	broad.mit.edu	37	7	127255045	127255045	+	Silent	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PBX3	5090	broad.mit.edu	37	9	128728085	128728085	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PBXIP1	57326	broad.mit.edu	37	1	154918537	154918537	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PBXIP1	57326	broad.mit.edu	37	1	154918636	154918636	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCCB	5096	broad.mit.edu	37	3	136048788	136048788	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH12	51294	broad.mit.edu	37	5	141325308	141325308	+	Missense_Mutation	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH18	54510	broad.mit.edu	37	4	138451367	138451367	+	Nonsense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH1	5097	broad.mit.edu	37	5	141244219	141244219	+	Silent	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB11	56125	broad.mit.edu	37	5	140579964	140579964	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB12	56124	broad.mit.edu	37	5	140588603	140588603	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB4	56131	broad.mit.edu	37	5	140501701	140501701	+	Missense_Mutation	SNP	G	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB9	56127	broad.mit.edu	37	5	140568789	140568789	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGB4	8641	broad.mit.edu	37	5	140768013	140768013	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCK2	5106	broad.mit.edu	37	14	24568756	24568756	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCLO	27445	broad.mit.edu	37	7	82390669	82390669	+	Intron	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCLO	27445	broad.mit.edu	37	7	82545466	82545466	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCSK5	5125	broad.mit.edu	37	9	78547386	78547386	+	Nonsense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDCD1	5133	broad.mit.edu	37	2	242793526	242793526	+	Intron	SNP	G	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDCD2	5134	broad.mit.edu	37	6	170886768	170886768	+	Missense_Mutation	SNP	C	G	G	rs140493653	by1000genomes	TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE11A	50940	broad.mit.edu	37	2	178705175	178705175	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE3A	5139	broad.mit.edu	37	12	20522729	20522729	+	Nonsense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE3A	5139	broad.mit.edu	37	12	20704804	20704804	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144857089	144857089	+	Intron	SNP	T	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144859641	144859641	+	Intron	SNP	C	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144879317	144879317	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144922750	144922750	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144931287	144931287	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDHA2	5161	broad.mit.edu	37	4	96762101	96762102	+	Missense_Mutation	DNP	CA	AG	AG			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDIA4	9601	broad.mit.edu	37	7	148711878	148711878	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDIA5	10954	broad.mit.edu	37	3	122865001	122865001	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDLIM3	27295	broad.mit.edu	37	4	186423617	186423617	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDLIM3	27295	broad.mit.edu	37	4	186435436	186435436	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDXDC2	283970	broad.mit.edu	37	16	70012150	70012150	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZD2	23037	broad.mit.edu	37	5	32052744	32052744	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZD8	118987	broad.mit.edu	37	10	119044270	119044270	+	Silent	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEA15	8682	broad.mit.edu	37	1	160182980	160182980	+	Missense_Mutation	SNP	C	A	A	rs11552719		TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEAR1	375033	broad.mit.edu	37	1	156876543	156876543	+	Missense_Mutation	SNP	C	A	A	rs150756495	byFrequency	TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEAR1	375033	broad.mit.edu	37	1	156877327	156877327	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEX5	5830	broad.mit.edu	37	12	7343867	7343867	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PFKM	5213	broad.mit.edu	37	12	48524199	48524199	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PFN4	375189	broad.mit.edu	37	2	24344110	24344110	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGA3	643834	broad.mit.edu	37	11	60974843	60974843	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHACTR4	65979	broad.mit.edu	37	1	28792091	28792091	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHF15	23338	broad.mit.edu	37	5	133887800	133887800	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHF17	79960	broad.mit.edu	37	4	129789081	129789081	+	Missense_Mutation	SNP	A	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHF23	79142	broad.mit.edu	37	17	7138983	7138983	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHKB	5257	broad.mit.edu	37	16	47630350	47630350	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHKB	5257	broad.mit.edu	37	16	47694641	47694641	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHYH	5264	broad.mit.edu	37	10	13325784	13325784	+	Missense_Mutation	SNP	C	A	A	rs62619919	byFrequency;by1000genomes	TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PI15	51050	broad.mit.edu	37	8	75737579	75737579	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PI4KB	5298	broad.mit.edu	37	1	151276174	151276174	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PI4KB	5298	broad.mit.edu	37	1	151288004	151288004	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIAS3	10401	broad.mit.edu	37	1	145578248	145578248	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PICALM	8301	broad.mit.edu	37	11	85685775	85685775	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3CG	5294	broad.mit.edu	37	7	106509119	106509119	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3R1	5295	broad.mit.edu	37	5	67589651	67589651	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIKFYVE	200576	broad.mit.edu	37	2	209214844	209214844	+	Intron	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PILRA	29992	broad.mit.edu	37	7	99972073	99972073	+	Intron	SNP	T	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIP4K2C	79837	broad.mit.edu	37	12	57995235	57995235	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PITPNM2	57605	broad.mit.edu	37	12	123497078	123497078	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PITPNM2	57605	broad.mit.edu	37	12	123497388	123497388	+	Intron	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PITX2	5308	broad.mit.edu	37	4	111553980	111553980	+	Intron	DEL	C	-	-			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIWIL4	143689	broad.mit.edu	37	11	94316700	94316700	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD1L2	114780	broad.mit.edu	37	16	81204688	81204688	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD1	5310	broad.mit.edu	37	16	2155467	2155467	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKM2	5315	broad.mit.edu	37	15	72495421	72495421	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKP2	5318	broad.mit.edu	37	12	32945618	32945618	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2G4A	5321	broad.mit.edu	37	1	186880524	186880524	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2R1	22925	broad.mit.edu	37	2	160885355	160885355	+	Intron	SNP	G	T	T	rs140344767	by1000genomes	TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLAT	5327	broad.mit.edu	37	8	42046371	42046371	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCB1	23236	broad.mit.edu	37	20	8639185	8639185	+	Silent	SNP	T	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCB1	23236	broad.mit.edu	37	20	8705428	8705428	+	Intron	SNP	T	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCE1	51196	broad.mit.edu	37	10	96022534	96022534	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCG2	5336	broad.mit.edu	37	16	81942093	81942093	+	Nonsense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCL2	23228	broad.mit.edu	37	3	17051810	17051810	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEC	5339	broad.mit.edu	37	8	144991022	144991022	+	Missense_Mutation	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHA9	51054	broad.mit.edu	37	12	45567503	45567503	+	Missense_Mutation	SNP	T	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLG	5340	broad.mit.edu	37	6	161135757	161135757	+	Intron	SNP	A	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLG	5340	broad.mit.edu	37	6	161152298	161152298	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLK4	10733	broad.mit.edu	37	4	128808591	128808591	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLOD1	5351	broad.mit.edu	37	1	12026276	12026276	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXDC1	57125	broad.mit.edu	37	17	37296055	37296055	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXDC2	84898	broad.mit.edu	37	10	20500551	20500551	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA2	5362	broad.mit.edu	37	1	208218542	208218542	+	Missense_Mutation	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA2	5362	broad.mit.edu	37	1	208218557	208218557	+	Splice_Site	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA2	5362	broad.mit.edu	37	1	208269121	208269121	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA4	91584	broad.mit.edu	37	7	131831513	131831513	+	Intron	SNP	C	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA4	91584	broad.mit.edu	37	7	131853280	131853280	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNC1	10154	broad.mit.edu	37	12	94542933	94542933	+	Silent	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PM20D1	148811	broad.mit.edu	37	1	205813199	205813199	+	Intron	DEL	G	-	-			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PMFBP1	83449	broad.mit.edu	37	16	72162647	72162647	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PML	5371	broad.mit.edu	37	15	74336018	74336018	+	Intron	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PMS2L4	5382	broad.mit.edu	37	7	66751315	66751315	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNLDC1	154197	broad.mit.edu	37	6	160224193	160224193	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNMAL2	57469	broad.mit.edu	37	19	46997190	46997190	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNN	5411	broad.mit.edu	37	14	39647005	39647005	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNPLA6	10908	broad.mit.edu	37	19	7619975	7619975	+	Intron	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POGZ	23126	broad.mit.edu	37	1	151380489	151380489	+	Intron	DEL	A	-	-			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POGZ	23126	broad.mit.edu	37	1	151381039	151381039	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POGZ	23126	broad.mit.edu	37	1	151400943	151400943	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POGZ	23126	broad.mit.edu	37	1	151413464	151413464	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLE	5426	broad.mit.edu	37	12	133214603	133214603	+	Missense_Mutation	SNP	C	T	T	rs114173192	by1000genomes	TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLN	353497	broad.mit.edu	37	4	2160923	2160923	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR2G	5436	broad.mit.edu	37	11	62533807	62533807	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR3A	11128	broad.mit.edu	37	10	79741204	79741204	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR3A	11128	broad.mit.edu	37	10	79784767	79784767	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POMT1	10585	broad.mit.edu	37	9	134379502	134379505	+	Intron	DEL	GCCG	-	-			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POMZP3	22932	broad.mit.edu	37	7	76254804	76254804	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POTEH	23784	broad.mit.edu	37	22	16287387	16287387	+	Frame_Shift_Del	DEL	C	-	-			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POU6F1	5463	broad.mit.edu	37	12	51589813	51589813	+	Silent	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPARGC1B	133522	broad.mit.edu	37	5	149214963	149214963	+	Intron	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPEF2	5470	broad.mit.edu	37	4	76793140	76793141	+	Intron	INS	-	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPFIBP1	8496	broad.mit.edu	37	12	27832504	27832504	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPIAL4G	644591	broad.mit.edu	37	1	143767861	143767861	+	5'UTR	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPIF	10105	broad.mit.edu	37	10	81108758	81108758	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPL	5493	broad.mit.edu	37	16	4934021	4934021	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPOX	5498	broad.mit.edu	37	1	161138863	161138863	+	Missense_Mutation	SNP	C	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPOX	5498	broad.mit.edu	37	1	161141050	161141050	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R3F	89801	broad.mit.edu	37	X	49137967	49137967	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R2B	5521	broad.mit.edu	37	5	146077843	146077843	+	Intron	SNP	A	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP3R1	5534	broad.mit.edu	37	2	68415760	68415760	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP4C	5531	broad.mit.edu	37	16	30093735	30093735	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRAMEF4	400735	broad.mit.edu	37	1	12941827	12941827	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRC1	9055	broad.mit.edu	37	15	91527863	91527863	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM16	63976	broad.mit.edu	37	1	3301939	3301939	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM1	639	broad.mit.edu	37	6	106553533	106553533	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM2	7799	broad.mit.edu	37	1	14106796	14106796	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM9	56979	broad.mit.edu	37	5	23526203	23526203	+	Intron	SNP	G	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDX6	9588	broad.mit.edu	37	1	173450503	173450503	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PREP	5550	broad.mit.edu	37	6	105776790	105776790	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRG2	5553	broad.mit.edu	37	11	57156386	57156386	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRICKLE3	4007	broad.mit.edu	37	X	49034315	49034315	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKAG2	51422	broad.mit.edu	37	7	151372757	151372757	+	Intron	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKAR1B	5575	broad.mit.edu	37	7	751132	751132	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKD1	5587	broad.mit.edu	37	14	30103557	30103557	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKD1	5587	broad.mit.edu	37	14	30132885	30132885	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PROKR2	128674	broad.mit.edu	37	20	5282851	5282851	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PROM2	150696	broad.mit.edu	37	2	95944303	95944303	+	Intron	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRPF3	9129	broad.mit.edu	37	1	150298244	150298244	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRPF40B	25766	broad.mit.edu	37	12	50027294	50027294	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRPF4B	8899	broad.mit.edu	37	6	4056788	4056788	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRRC1	133619	broad.mit.edu	37	5	126860497	126860497	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRSS21	10942	broad.mit.edu	37	16	2871423	2871423	+	Silent	SNP	A	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRTFDC1	56952	broad.mit.edu	37	10	25140290	25140290	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRTFDC1	56952	broad.mit.edu	37	10	25160828	25160828	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRUNE	58497	broad.mit.edu	37	1	150990601	150990601	+	Intron	SNP	A	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRUNE	58497	broad.mit.edu	37	1	151006331	151006331	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSD2	84249	broad.mit.edu	37	5	139193892	139193892	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSD3	23362	broad.mit.edu	37	8	18541402	18541402	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG1	5669	broad.mit.edu	37	19	43358275	43358275	+	Intron	SNP	C	A	A	rs112018210	by1000genomes	TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG4	5672	broad.mit.edu	37	19	43709505	43709505	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMB4	5692	broad.mit.edu	37	1	151373711	151373711	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMB4	5692	broad.mit.edu	37	1	151373769	151373769	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMB4	5692	broad.mit.edu	37	1	151373829	151373829	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMC4	5704	broad.mit.edu	37	19	40485783	40485783	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMD4	5710	broad.mit.edu	37	1	151239726	151239726	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMD9	5715	broad.mit.edu	37	12	122326910	122326910	+	Intron	SNP	G	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSME4	23198	broad.mit.edu	37	2	54148293	54148293	+	Intron	SNP	C	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTCH2	8643	broad.mit.edu	37	1	45297682	45297682	+	Nonsense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTCHD2	57540	broad.mit.edu	37	1	11561436	11561436	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTCHD2	57540	broad.mit.edu	37	1	11591583	11591583	+	Intron	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTCHD3	374308	broad.mit.edu	37	10	27687285	27687285	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTH1R	5745	broad.mit.edu	37	3	46945231	46945231	+	3'UTR	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTHLH	5744	broad.mit.edu	37	12	28116505	28116505	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTN	5764	broad.mit.edu	37	7	136912820	136912820	+	Missense_Mutation	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN4	5775	broad.mit.edu	37	2	120684286	120684286	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRB	5787	broad.mit.edu	37	12	70980746	70980746	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	8486184	8486184	+	Missense_Mutation	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRN2	5799	broad.mit.edu	37	7	157931164	157931164	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRN	5798	broad.mit.edu	37	2	220172515	220172515	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRT	11122	broad.mit.edu	37	20	40735634	40735634	+	Intron	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRT	11122	broad.mit.edu	37	20	40827860	40827860	+	Intron	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRT	11122	broad.mit.edu	37	20	40911124	40911124	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRU	10076	broad.mit.edu	37	1	29618423	29618423	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRZ1	5803	broad.mit.edu	37	7	121678889	121678889	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PVRL4	81607	broad.mit.edu	37	1	161047375	161047375	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PWP1	11137	broad.mit.edu	37	12	108079764	108079764	+	Intron	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PXDNL	137902	broad.mit.edu	37	8	52384673	52384673	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PXDN	7837	broad.mit.edu	37	2	1670144	1670144	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PYGM	5837	broad.mit.edu	37	11	64521067	64521068	+	Missense_Mutation	DNP	CC	AT	AT			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
QRICH2	84074	broad.mit.edu	37	17	74275186	74275186	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB13	5872	broad.mit.edu	37	1	153954901	153954901	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB25	57111	broad.mit.edu	37	1	156035812	156035812	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB34	83871	broad.mit.edu	37	17	27042267	27042267	+	Silent	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB37	326624	broad.mit.edu	37	17	72741444	72741444	+	Splice_Site	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB3GAP2	25782	broad.mit.edu	37	1	220326683	220326683	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB3GAP2	25782	broad.mit.edu	37	1	220332761	220332761	+	Silent	SNP	A	T	T	rs111791643		TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB3GAP2	25782	broad.mit.edu	37	1	220369497	220369497	+	Intron	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RABEP2	79874	broad.mit.edu	37	16	28920082	28920082	+	Nonsense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RABL5	64792	broad.mit.edu	37	7	100961446	100961446	+	Silent	SNP	C	A	A	rs149034136	byFrequency	TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RACGAP1P	83956	broad.mit.edu	37	12	45458691	45458691	+	RNA	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAD1	5810	broad.mit.edu	37	5	34909163	34909163	+	Intron	SNP	C	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RALYL	138046	broad.mit.edu	37	8	85785640	85785640	+	Intron	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RANBP2	5903	broad.mit.edu	37	2	109347393	109347393	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RANBP2	5903	broad.mit.edu	37	2	109352197	109352197	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RANBP2	5903	broad.mit.edu	37	2	109388363	109388363	+	Intron	SNP	C	A	A	rs17036864	by1000genomes	TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RANBP3L	202151	broad.mit.edu	37	5	36264927	36264927	+	Intron	SNP	G	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RANBP3	8498	broad.mit.edu	37	19	5925686	5925686	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAP1A	5906	broad.mit.edu	37	1	112234014	112234014	+	Missense_Mutation	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAPGEF6	51735	broad.mit.edu	37	5	131054658	131054658	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASSF2	9770	broad.mit.edu	37	20	4768370	4768370	+	Missense_Mutation	SNP	G	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBAK	57786	broad.mit.edu	37	7	5103959	5103959	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBBP5	5929	broad.mit.edu	37	1	205070738	205070738	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBBP6	5930	broad.mit.edu	37	16	24578602	24578602	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBKS	64080	broad.mit.edu	37	2	28004656	28004656	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM19	9904	broad.mit.edu	37	12	114386746	114386746	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM27	54439	broad.mit.edu	37	5	145631245	145631245	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM45	129831	broad.mit.edu	37	2	178977175	178977175	+	5'Flank	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBP2	5948	broad.mit.edu	37	3	139181127	139181127	+	Missense_Mutation	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RC3H2	54542	broad.mit.edu	37	9	125621032	125621032	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REG1A	5967	broad.mit.edu	37	2	79350291	79350291	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REG3G	130120	broad.mit.edu	37	2	79254791	79254791	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REST	5978	broad.mit.edu	37	4	57797280	57797280	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REXO4	57109	broad.mit.edu	37	9	136277519	136277519	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFC4	5984	broad.mit.edu	37	3	186522425	186522425	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFX4	5992	broad.mit.edu	37	12	107144439	107144439	+	Silent	SNP	G	T	T	rs141950761	byFrequency;by1000genomes	TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFX5	5993	broad.mit.edu	37	1	151315028	151315028	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGL1	23179	broad.mit.edu	37	1	183775502	183775502	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS3	5998	broad.mit.edu	37	9	116279874	116279874	+	Silent	SNP	G	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS5	8490	broad.mit.edu	37	1	163122259	163122259	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS7	6000	broad.mit.edu	37	1	241262011	241262011	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHEBL1	121268	broad.mit.edu	37	12	49460111	49460111	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHEBL1	121268	broad.mit.edu	37	12	49460377	49460377	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RICTOR	253260	broad.mit.edu	37	5	38945287	38945287	+	Intron	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RILPL1	353116	broad.mit.edu	37	12	123983339	123983339	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMBP2	23504	broad.mit.edu	37	12	130919346	130919346	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS2	9699	broad.mit.edu	37	8	104987690	104987690	+	Missense_Mutation	SNP	A	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS2	9699	broad.mit.edu	37	8	105260983	105260983	+	Silent	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RINT1	60561	broad.mit.edu	37	7	105173352	105173352	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIOK1	83732	broad.mit.edu	37	6	7405521	7405521	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIOK2	55781	broad.mit.edu	37	5	96513588	96513588	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIPK3	11035	broad.mit.edu	37	14	24805569	24805569	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIT1	6016	broad.mit.edu	37	1	155880456	155880456	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNASEL	6041	broad.mit.edu	37	1	182555038	182555038	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF10	9921	broad.mit.edu	37	12	121001235	121001235	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF133	168433	broad.mit.edu	37	7	122338805	122338805	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF20	56254	broad.mit.edu	37	9	104324633	104324633	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF213	57674	broad.mit.edu	37	17	78363858	78363858	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF219	79596	broad.mit.edu	37	13	79189871	79189871	+	Missense_Mutation	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF31	55072	broad.mit.edu	37	14	24619151	24619151	+	Intron	SNP	A	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROR2	4920	broad.mit.edu	37	9	94519600	94519600	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPAP1	26015	broad.mit.edu	37	15	41823046	41823046	+	Intron	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPH3A	22895	broad.mit.edu	37	12	113325493	113325493	+	Intron	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPL8	6132	broad.mit.edu	37	8	146015386	146015386	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPRD2	23248	broad.mit.edu	37	1	150390155	150390155	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPRD2	23248	broad.mit.edu	37	1	150444155	150444155	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPRD2	23248	broad.mit.edu	37	1	150444217	150444217	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPRD2	23248	broad.mit.edu	37	1	150444242	150444242	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPS9	6203	broad.mit.edu	37	19	54705008	54705008	+	Intron	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPTOR	57521	broad.mit.edu	37	17	78899232	78899232	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RRP1B	23076	broad.mit.edu	37	21	45107884	45107884	+	Silent	SNP	T	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSF1	51773	broad.mit.edu	37	11	77524598	77524598	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSRC2	65117	broad.mit.edu	37	12	123001951	123001951	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTEL1	51750	broad.mit.edu	37	20	62294336	62294336	+	Intron	SNP	C	A	A	rs149408979	by1000genomes	TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTN1	6252	broad.mit.edu	37	14	60212999	60212999	+	Missense_Mutation	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTN1	6252	broad.mit.edu	37	14	60213133	60213133	+	Missense_Mutation	SNP	G	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTTN	25914	broad.mit.edu	37	18	67776806	67776806	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUNDC1	146923	broad.mit.edu	37	17	41142355	41142355	+	Missense_Mutation	SNP	A	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUNX1T1	862	broad.mit.edu	37	8	93023240	93023240	+	Missense_Mutation	SNP	G	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUSC1	23623	broad.mit.edu	37	1	155296629	155296629	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUSC1	23623	broad.mit.edu	37	1	155297964	155297964	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR1	6261	broad.mit.edu	37	19	39025938	39025938	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237801647	237801647	+	Intron	SNP	T	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237947924	237947924	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR3	6263	broad.mit.edu	37	15	33927929	33927929	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
S100A14	57402	broad.mit.edu	37	1	153587692	153587692	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
S100PBP	64766	broad.mit.edu	37	1	33291714	33291714	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAA2	6289	broad.mit.edu	37	11	18266884	18266884	+	3'UTR	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMD9L	219285	broad.mit.edu	37	7	92763843	92763843	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMM50	25813	broad.mit.edu	37	22	44384991	44384991	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SARM1	23098	broad.mit.edu	37	17	26686461	26686461	+	Intron	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SATB2	23314	broad.mit.edu	37	2	200298192	200298192	+	Missense_Mutation	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCEL	8796	broad.mit.edu	37	13	78134003	78134003	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCHIP1	29970	broad.mit.edu	37	3	159439556	159439556	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCML2	10389	broad.mit.edu	37	X	18265023	18265023	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCML2	10389	broad.mit.edu	37	X	18265045	18265045	+	Intron	SNP	A	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCML2	10389	broad.mit.edu	37	X	18338344	18338344	+	Intron	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCML4	256380	broad.mit.edu	37	6	108068029	108068029	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN2A	6326	broad.mit.edu	37	2	166170469	166170469	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCYL1	57410	broad.mit.edu	37	11	65303696	65303696	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDCCAG1	9147	broad.mit.edu	37	14	50251631	50251631	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDK2	54549	broad.mit.edu	37	17	71379954	71379954	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDPR	8436	broad.mit.edu	37	2	192701173	192701173	+	Nonsense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC16A	9919	broad.mit.edu	37	9	139370619	139370619	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC22B	9554	broad.mit.edu	37	1	145115872	145115872	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC24A	10802	broad.mit.edu	37	5	134002613	134002614	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC24B	10427	broad.mit.edu	37	4	110452555	110452555	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC31B	25956	broad.mit.edu	37	10	102265900	102265900	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEL1L2	80343	broad.mit.edu	37	20	13830921	13830921	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SELENBP1	8991	broad.mit.edu	37	1	151337182	151337182	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SELENBP1	8991	broad.mit.edu	37	1	151339214	151339214	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SELK	58515	broad.mit.edu	37	3	53922561	53922561	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SELP	6403	broad.mit.edu	37	1	169586791	169586791	+	Intron	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA4A	64218	broad.mit.edu	37	1	156144922	156144922	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA4D	10507	broad.mit.edu	37	9	92064877	92064877	+	Intron	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA6C	10500	broad.mit.edu	37	1	151107999	151107999	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA6C	10500	broad.mit.edu	37	1	151114957	151114957	+	Intron	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEPT14	346288	broad.mit.edu	37	7	55878792	55878792	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEPT8	23176	broad.mit.edu	37	5	132101159	132101159	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERAC1	84947	broad.mit.edu	37	6	158567843	158567843	+	Missense_Mutation	SNP	C	A	A	rs150097653		TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERP1	27230	broad.mit.edu	37	3	150263482	150263482	+	Intron	SNP	C	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINA12	145264	broad.mit.edu	37	14	94963093	94963093	+	Intron	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINA7	6906	broad.mit.edu	37	X	105281047	105281047	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINI2	5276	broad.mit.edu	37	3	167189502	167189502	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETDB1	9869	broad.mit.edu	37	1	150923260	150923260	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEZ6L2	26470	broad.mit.edu	37	16	29885112	29885112	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SF3B2	10992	broad.mit.edu	37	11	65827286	65827286	+	Missense_Mutation	SNP	G	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFMBT1	51460	broad.mit.edu	37	3	53003138	53003138	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFN	2810	broad.mit.edu	37	1	27190469	27190469	+	3'UTR	SNP	C	A	A	rs75343738		TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFRP2	6423	broad.mit.edu	37	4	154702667	154702667	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFRS16	11129	broad.mit.edu	37	19	45574080	45574080	+	Silent	SNP	C	A	A	rs150962382		TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFRS17A	8227	broad.mit.edu	37	X	1719771	1719771	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFTA3	253970	broad.mit.edu	37	14	36946215	36946215	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGCD	6444	broad.mit.edu	37	5	156186407	156186407	+	3'UTR	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGIP1	84251	broad.mit.edu	37	1	67145433	67145433	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGIP1	84251	broad.mit.edu	37	1	67205156	67205156	+	Missense_Mutation	SNP	C	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGK1	6446	broad.mit.edu	37	6	134495848	134495848	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGK3	23678	broad.mit.edu	37	8	67763166	67763166	+	Intron	SNP	A	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGOL2	151246	broad.mit.edu	37	2	201434433	201434433	+	Missense_Mutation	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH2B3	10019	broad.mit.edu	37	12	111885811	111885811	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3BGR	6450	broad.mit.edu	37	21	40834518	40834518	+	Intron	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3D19	152503	broad.mit.edu	37	4	152096011	152096011	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3GL3	6457	broad.mit.edu	37	15	84286886	84286886	+	Silent	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3KBP1	30011	broad.mit.edu	37	X	19705766	19705766	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHANK1	50944	broad.mit.edu	37	19	51192465	51192465	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHANK1	50944	broad.mit.edu	37	19	51207309	51207309	+	Intron	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHANK3	85358	broad.mit.edu	37	22	51123021	51123021	+	Silent	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHC1	6464	broad.mit.edu	37	1	154940601	154940601	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHC1	6464	broad.mit.edu	37	1	154940750	154940750	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHE	126669	broad.mit.edu	37	1	154461820	154461820	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHE	126669	broad.mit.edu	37	1	154474139	154474139	+	Missense_Mutation	SNP	T	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHROOM4	57477	broad.mit.edu	37	X	50378411	50378411	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC12	89858	broad.mit.edu	37	19	52004768	52004768	+	Missense_Mutation	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC5	8778	broad.mit.edu	37	19	52130577	52130577	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SILV	6490	broad.mit.edu	37	12	56348060	56348060	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIPA1L3	23094	broad.mit.edu	37	19	38572538	38572538	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIPA1	6494	broad.mit.edu	37	11	65417544	65417544	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIRPB1	10326	broad.mit.edu	37	20	1559271	1559271	+	Nonsense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIRT3	23410	broad.mit.edu	37	11	218977	218977	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SKAP1	8631	broad.mit.edu	37	17	46262150	46262150	+	Silent	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SKAP1	8631	broad.mit.edu	37	17	46262238	46262238	+	Intron	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLAMF1	6504	broad.mit.edu	37	1	160589455	160589455	+	Intron	SNP	C	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLAMF1	6504	broad.mit.edu	37	1	160607340	160607340	+	Intron	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLAMF8	56833	broad.mit.edu	37	1	159805027	159805027	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A1	6557	broad.mit.edu	37	15	48513039	48513039	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A6	9990	broad.mit.edu	37	15	34531187	34531187	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A6	9990	broad.mit.edu	37	15	34531252	34531252	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A9	56996	broad.mit.edu	37	7	100454798	100454798	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC13A2	9058	broad.mit.edu	37	17	26817355	26817355	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC13A4	26266	broad.mit.edu	37	7	135375853	135375853	+	Intron	SNP	A	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC13A5	284111	broad.mit.edu	37	17	6604360	6604360	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC18A2	6571	broad.mit.edu	37	10	119015204	119015204	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC24A4	123041	broad.mit.edu	37	14	92913678	92913678	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC24A6	80024	broad.mit.edu	37	12	113737668	113737669	+	Frame_Shift_Ins	INS	-	AT	AT	rs144434177		TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A10	1468	broad.mit.edu	37	17	79686897	79686897	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A14	9016	broad.mit.edu	37	X	129498605	129498605	+	Missense_Mutation	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A20	788	broad.mit.edu	37	3	48929293	48929293	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A26	115286	broad.mit.edu	37	3	66428294	66428294	+	3'UTR	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A2	83884	broad.mit.edu	37	5	140682832	140682832	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A10	65012	broad.mit.edu	37	12	58014271	58014271	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC27A3	11000	broad.mit.edu	37	1	153751968	153751968	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC27A4	10999	broad.mit.edu	37	9	131115780	131115780	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC2A9	56606	broad.mit.edu	37	4	10027616	10027616	+	5'UTR	SNP	T	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC30A10	55532	broad.mit.edu	37	1	220088856	220088856	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC35C2	51006	broad.mit.edu	37	20	44979443	44979443	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC35F1	222553	broad.mit.edu	37	6	118606475	118606475	+	Missense_Mutation	SNP	T	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC39A1	27173	broad.mit.edu	37	1	153935099	153935099	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC39A6	25800	broad.mit.edu	37	18	33706813	33706813	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC45A2	51151	broad.mit.edu	37	5	33947310	33947310	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC45A2	51151	broad.mit.edu	37	5	33951835	33951835	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC45A2	51151	broad.mit.edu	37	5	33984276	33984276	+	Intron	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A3	6508	broad.mit.edu	37	2	220493252	220493252	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A8	9498	broad.mit.edu	37	12	51890825	51890825	+	Nonsense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A9	83697	broad.mit.edu	37	5	139740437	139740437	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A11	115584	broad.mit.edu	37	16	24919397	24919397	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A1	6523	broad.mit.edu	37	22	32445951	32445951	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A3	6526	broad.mit.edu	37	21	35467932	35467932	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A15	55117	broad.mit.edu	37	12	85277886	85277886	+	Intron	SNP	A	T	T	rs139016624		TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A17	388662	broad.mit.edu	37	1	110737248	110737248	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A17	388662	broad.mit.edu	37	1	110737419	110737419	+	Intron	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A19	340024	broad.mit.edu	37	5	1217012	1217012	+	Silent	SNP	C	T	T	rs145782869		TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A19	340024	broad.mit.edu	37	5	1218978	1218978	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A3	6531	broad.mit.edu	37	5	1442965	1442965	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC7A6	9057	broad.mit.edu	37	16	68328628	68328628	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A2	6549	broad.mit.edu	37	2	103300812	103300812	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO1B3	28234	broad.mit.edu	37	12	21054390	21054390	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO6A1	133482	broad.mit.edu	37	5	101709339	101709339	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT2	9353	broad.mit.edu	37	4	20487973	20487973	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT2	9353	broad.mit.edu	37	4	20569279	20569279	+	Intron	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT3	6586	broad.mit.edu	37	5	168201502	168201502	+	Intron	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT3	6586	broad.mit.edu	37	5	168690747	168690747	+	Intron	SNP	C	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLITRK1	114798	broad.mit.edu	37	13	84455038	84455038	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLMAP	7871	broad.mit.edu	37	3	57898147	57898147	+	Missense_Mutation	SNP	G	T	T	rs138744399		TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMAD1	4086	broad.mit.edu	37	4	146479012	146479012	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCAL1	50485	broad.mit.edu	37	2	217300022	217300022	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMC6	79677	broad.mit.edu	37	2	17896314	17896314	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMG1	23049	broad.mit.edu	37	16	18897085	18897085	+	Intron	SNP	A	G	G	rs150351611	by1000genomes	TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMG5	23381	broad.mit.edu	37	1	156222251	156222251	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMG5	23381	broad.mit.edu	37	1	156247101	156247101	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMN2	6607	broad.mit.edu	37	5	69372325	69372325	+	Intron	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMPDL3A	10924	broad.mit.edu	37	6	123127531	123127531	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMTN	6525	broad.mit.edu	37	22	31487001	31487001	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMYD1	150572	broad.mit.edu	37	2	88405948	88405948	+	Silent	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNAPC2	6618	broad.mit.edu	37	19	7987216	7987216	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNCA	6622	broad.mit.edu	37	4	90756767	90756767	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD115-20	100033460	broad.mit.edu	37	15	25474227	25474227	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNRPD2	6633	broad.mit.edu	37	19	46195165	46195165	+	5'UTR	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNRPN	6638	broad.mit.edu	37	15	25221498	25221498	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX13	23161	broad.mit.edu	37	7	17836341	17836341	+	3'UTR	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOBP	55084	broad.mit.edu	37	6	107854883	107854883	+	Intron	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOHLH1	402381	broad.mit.edu	37	9	138590260	138590260	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS1	114815	broad.mit.edu	37	10	108378025	108378025	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS1	114815	broad.mit.edu	37	10	108439445	108439445	+	Nonsense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS3	22986	broad.mit.edu	37	10	106899298	106899298	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORT1	6272	broad.mit.edu	37	1	109856583	109856583	+	3'UTR	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SP100	6672	broad.mit.edu	37	2	231314950	231314950	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SP6	80320	broad.mit.edu	37	17	45925675	45925675	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG11B	10407	broad.mit.edu	37	8	7320418	7320418	+	Intron	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG5	10615	broad.mit.edu	37	17	26905631	26905631	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG5	10615	broad.mit.edu	37	17	26912931	26912931	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAM1	6677	broad.mit.edu	37	7	123593677	123593677	+	Missense_Mutation	SNP	G	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPARC	6678	broad.mit.edu	37	5	151047110	151047110	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATA2L	124044	broad.mit.edu	37	16	89764657	89764657	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPDYE3	441272	broad.mit.edu	37	7	99913279	99913280	+	Intron	DNP	CC	AA	AA			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEF2	79925	broad.mit.edu	37	5	35692520	35692520	+	Intron	SNP	A	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPON1	10418	broad.mit.edu	37	11	14101549	14101549	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPOPL	339745	broad.mit.edu	37	2	139307978	139307978	+	Intron	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPRYD3	84926	broad.mit.edu	37	12	53473065	53473065	+	Intron	DEL	T	-	-			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPRYD5	84767	broad.mit.edu	37	11	55653297	55653297	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPRYD5	84767	broad.mit.edu	37	11	55658705	55658705	+	Missense_Mutation	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158582586	158582586	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158596575	158596575	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158631099	158631099	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158641186	158641186	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158646003	158646005	+	In_Frame_Del	DEL	TCT	-	-			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTAN1	6709	broad.mit.edu	37	9	131344978	131344978	+	Missense_Mutation	SNP	G	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTAN1	6709	broad.mit.edu	37	9	131390083	131390083	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTBN4	57731	broad.mit.edu	37	19	41025943	41025943	+	Missense_Mutation	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTLC2	9517	broad.mit.edu	37	14	78021718	78021718	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SQLE	6713	broad.mit.edu	37	8	126015633	126015633	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRBD1	55133	broad.mit.edu	37	2	45774069	45774069	+	Intron	SNP	T	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRCAP	10847	broad.mit.edu	37	16	30723611	30723611	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRRM1	10250	broad.mit.edu	37	1	24979112	24979112	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSPO	23145	broad.mit.edu	37	7	149509629	149509629	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSX5	6758	broad.mit.edu	37	X	48054775	48054775	+	Missense_Mutation	SNP	A	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST18	9705	broad.mit.edu	37	8	53071670	53071670	+	Splice_Site	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST6GALNAC3	256435	broad.mit.edu	37	1	76779642	76779642	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST8SIA1	6489	broad.mit.edu	37	12	22439382	22439382	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST8SIA1	6489	broad.mit.edu	37	12	22439445	22439445	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST8SIA6	338596	broad.mit.edu	37	10	17363151	17363152	+	Frame_Shift_Ins	INS	-	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST8SIA6	338596	broad.mit.edu	37	10	17369045	17369045	+	Silent	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAB2	55576	broad.mit.edu	37	12	104067855	104067855	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAB2	55576	broad.mit.edu	37	12	104151856	104151856	+	Intron	SNP	C	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAC3	246329	broad.mit.edu	37	12	57642572	57642572	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAG2	10735	broad.mit.edu	37	X	123199993	123199994	+	Intron	INS	-	T	T	rs72427896		TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAM	8027	broad.mit.edu	37	10	17747817	17747817	+	Intron	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAP1	26228	broad.mit.edu	37	4	68449236	68449236	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAP1	26228	broad.mit.edu	37	4	68449247	68449247	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAT2	6773	broad.mit.edu	37	12	56740394	56740394	+	Missense_Mutation	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STIM2	57620	broad.mit.edu	37	4	26949174	26949174	+	Intron	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STIM2	57620	broad.mit.edu	37	4	27010602	27010602	+	Silent	SNP	C	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK10	6793	broad.mit.edu	37	5	171488252	171488252	+	Silent	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK11IP	114790	broad.mit.edu	37	2	220467116	220467116	+	Intron	DEL	G	-	-			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK16	8576	broad.mit.edu	37	2	220112047	220112047	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK31	56164	broad.mit.edu	37	7	23810610	23810610	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STOML2	30968	broad.mit.edu	37	9	35102635	35102635	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STT3A	3703	broad.mit.edu	37	11	125482995	125482995	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STXBP5L	9515	broad.mit.edu	37	3	120976087	120976087	+	Missense_Mutation	SNP	T	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SULF2	55959	broad.mit.edu	37	20	46331250	46331250	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUN5	140732	broad.mit.edu	37	20	31583502	31583502	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUZ12	23512	broad.mit.edu	37	17	30302592	30302592	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SV2A	9900	broad.mit.edu	37	1	149884758	149884758	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SV2B	9899	broad.mit.edu	37	15	91801710	91801710	+	Missense_Mutation	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SVEP1	79987	broad.mit.edu	37	9	113148099	113148099	+	Intron	SNP	C	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SVIL	6840	broad.mit.edu	37	10	29811300	29811300	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SVIL	6840	broad.mit.edu	37	10	29820930	29820930	+	Splice_Site	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYCP2L	221711	broad.mit.edu	37	6	10894542	10894542	+	Intron	SNP	A	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYCP2L	221711	broad.mit.edu	37	6	10928648	10928648	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE1	23345	broad.mit.edu	37	6	152477332	152477332	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE1	23345	broad.mit.edu	37	6	152590217	152590217	+	Intron	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE1	23345	broad.mit.edu	37	6	152680483	152680483	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE1	23345	broad.mit.edu	37	6	152771883	152771883	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE1	23345	broad.mit.edu	37	6	152832734	152832734	+	Intron	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE2	23224	broad.mit.edu	37	14	64450416	64450416	+	Intron	SNP	A	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNJ2	8871	broad.mit.edu	37	6	158483010	158483010	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT11	23208	broad.mit.edu	37	1	155837814	155837814	+	Silent	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT4	6860	broad.mit.edu	37	18	40850301	40850301	+	3'UTR	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYTL2	54843	broad.mit.edu	37	11	85420374	85420374	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAAR6	319100	broad.mit.edu	37	6	132891511	132891511	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAAR8	83551	broad.mit.edu	37	6	132874617	132874617	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TACC3	10460	broad.mit.edu	37	4	1729567	1729567	+	Silent	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TADA3	10474	broad.mit.edu	37	3	9828800	9828800	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF1L	138474	broad.mit.edu	37	9	32631871	32631871	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF2	6873	broad.mit.edu	37	8	120807872	120807872	+	Splice_Site	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF3	83860	broad.mit.edu	37	10	8050983	8050983	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF3	83860	broad.mit.edu	37	10	8055903	8055903	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAOK3	51347	broad.mit.edu	37	12	118682716	118682716	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TARS2	80222	broad.mit.edu	37	1	150471511	150471511	+	Splice_Site	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAS1R3	83756	broad.mit.edu	37	1	1269215	1269215	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAS2R19	259294	broad.mit.edu	37	12	11175131	11175131	+	Missense_Mutation	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D15	64786	broad.mit.edu	37	12	72290454	72290454	+	Intron	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D3C	414060	broad.mit.edu	37	17	34642520	34642520	+	Intron	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D3	729873	broad.mit.edu	37	17	36358763	36358763	+	Intron	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D7	51256	broad.mit.edu	37	6	13288667	13288667	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBL2	26608	broad.mit.edu	37	7	72987710	72987710	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX15	6913	broad.mit.edu	37	1	119474219	119474219	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX18	9096	broad.mit.edu	37	6	85422593	85422593	+	Intron	SNP	A	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX18	9096	broad.mit.edu	37	6	85466577	85466577	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBXAS1	6916	broad.mit.edu	37	7	139572283	139572283	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCF20	6942	broad.mit.edu	37	22	42606569	42606569	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCHH	7062	broad.mit.edu	37	1	152080051	152080051	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCHH	7062	broad.mit.edu	37	1	152080220	152080220	+	Missense_Mutation	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCIRG1	10312	broad.mit.edu	37	11	67815465	67815465	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCTN1	79600	broad.mit.edu	37	12	111079365	111079365	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDG	6996	broad.mit.edu	37	12	104380778	104380778	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDP1	55775	broad.mit.edu	37	14	90446935	90446935	+	Silent	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDRD5	163589	broad.mit.edu	37	1	179632355	179632355	+	Intron	SNP	T	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDRKH	11022	broad.mit.edu	37	1	151748754	151748754	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TECTB	6975	broad.mit.edu	37	10	114044342	114044342	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TENC1	23371	broad.mit.edu	37	12	53449016	53449016	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TERT	7015	broad.mit.edu	37	5	1264660	1264660	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEX101	83639	broad.mit.edu	37	19	43910744	43910744	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEX14	56155	broad.mit.edu	37	17	56688569	56688569	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFB1M	51106	broad.mit.edu	37	6	155579134	155579134	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFB1M	51106	broad.mit.edu	37	6	155619654	155619654	+	Silent	SNP	T	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TF	7018	broad.mit.edu	37	3	133485355	133485355	+	Intron	SNP	G	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGIF2LX	90316	broad.mit.edu	37	X	89177413	89177413	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THBS1	7057	broad.mit.edu	37	15	39885472	39885472	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THBS3	7059	broad.mit.edu	37	1	155169836	155169836	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THBS3	7059	broad.mit.edu	37	1	155170710	155170710	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THBS3	7059	broad.mit.edu	37	1	155171154	155171154	+	Intron	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THBS3	7059	broad.mit.edu	37	1	155174702	155174702	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THEM4	117145	broad.mit.edu	37	1	151847244	151847244	+	3'UTR	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THSD7A	221981	broad.mit.edu	37	7	11464362	11464362	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIAM1	7074	broad.mit.edu	37	21	32499417	32499417	+	Missense_Mutation	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIAM1	7074	broad.mit.edu	37	21	32513873	32513873	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIAM1	7074	broad.mit.edu	37	21	32595825	32595825	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIAM2	26230	broad.mit.edu	37	6	155565924	155565924	+	Intron	SNP	A	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLN1	7094	broad.mit.edu	37	9	35720232	35720232	+	Intron	SNP	C	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLN2	83660	broad.mit.edu	37	15	63004086	63004086	+	Intron	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLN2	83660	broad.mit.edu	37	15	63031756	63031756	+	Intron	SNP	G	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLR8	51311	broad.mit.edu	37	X	12938644	12938644	+	Silent	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TM2D3	80213	broad.mit.edu	37	15	102182797	102182797	+	Missense_Mutation	SNP	C	A	A	rs149589972		TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TM9SF1	10548	broad.mit.edu	37	14	24663940	24663940	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TM9SF1	10548	broad.mit.edu	37	14	24679975	24679975	+	Splice_Site	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMC1	117531	broad.mit.edu	37	9	75441686	75441686	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMC3	342125	broad.mit.edu	37	15	81633780	81633780	+	Missense_Mutation	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMED1	11018	broad.mit.edu	37	19	10945774	10945774	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMED6	146456	broad.mit.edu	37	16	69381973	69381973	+	Intron	SNP	C	A	A	rs113672113		TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM117	84216	broad.mit.edu	37	12	44238743	44238743	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM132E	124842	broad.mit.edu	37	17	32953231	32953231	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM14A	28978	broad.mit.edu	37	6	52546593	52546594	+	Intron	INS	-	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM182	130827	broad.mit.edu	37	2	103380886	103380886	+	Missense_Mutation	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM195	392636	broad.mit.edu	37	7	15241039	15241039	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM22	80723	broad.mit.edu	37	3	136573343	136573343	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM2	23670	broad.mit.edu	37	9	74319588	74319588	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM55A	55529	broad.mit.edu	37	8	92021080	92021080	+	Intron	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM74	157753	broad.mit.edu	37	8	109796659	109796659	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM89	440955	broad.mit.edu	37	3	48658286	48658286	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMIGD1	388364	broad.mit.edu	37	17	28645742	28645743	+	Intron	DNP	CC	AA	AA			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMOD1	7111	broad.mit.edu	37	9	100331134	100331134	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMOD4	29765	broad.mit.edu	37	1	151147041	151147041	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS11F	389208	broad.mit.edu	37	4	68919688	68919688	+	Missense_Mutation	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMTC1	83857	broad.mit.edu	37	12	29911708	29911708	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMTC2	160335	broad.mit.edu	37	12	83289719	83289719	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMTC2	160335	broad.mit.edu	37	12	83359605	83359605	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMTC3	160418	broad.mit.edu	37	12	88570021	88570021	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNFSF14	8740	broad.mit.edu	37	19	6665094	6665094	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNNT2	7139	broad.mit.edu	37	1	201332477	201332477	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNPO1	3842	broad.mit.edu	37	5	72189009	72189009	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNS1	7145	broad.mit.edu	37	2	218713852	218713852	+	Intron	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOP2A	7153	broad.mit.edu	37	17	38560480	38560480	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOPBP1	11073	broad.mit.edu	37	3	133320041	133320041	+	3'UTR	SNP	G	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOX4	9878	broad.mit.edu	37	14	21945407	21945407	+	5'UTR	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP53	7157	broad.mit.edu	37	17	7574000	7574000	+	Nonsense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPD52L3	89882	broad.mit.edu	37	9	6328761	6328761	+	Missense_Mutation	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPK1	27010	broad.mit.edu	37	7	144345758	144345758	+	Intron	SNP	T	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPRG1	285386	broad.mit.edu	37	3	188925427	188925427	+	Intron	SNP	C	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE2	93492	broad.mit.edu	37	13	20067047	20067047	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE2	93492	broad.mit.edu	37	13	20069310	20069310	+	Intron	SNP	T	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE	7179	broad.mit.edu	37	21	10942744	10942744	+	Frame_Shift_Del	DEL	C	-	-			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAF7	84231	broad.mit.edu	37	16	2222317	2222317	+	Missense_Mutation	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAK1	22906	broad.mit.edu	37	3	42167007	42167007	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAM2	9697	broad.mit.edu	37	6	52374326	52374326	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAP1	10131	broad.mit.edu	37	16	3724427	3724427	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAT1	50852	broad.mit.edu	37	3	108568141	108568141	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRDN	10345	broad.mit.edu	37	6	123824837	123824837	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRDN	10345	broad.mit.edu	37	6	123957853	123957853	+	Intron	SNP	A	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRHDE	29953	broad.mit.edu	37	12	72667414	72667414	+	Intron	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRHR	7201	broad.mit.edu	37	8	110131129	110131129	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM26	7726	broad.mit.edu	37	6	30157775	30157775	+	Intron	SNP	A	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM36	55521	broad.mit.edu	37	5	114466308	114466308	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM46	80128	broad.mit.edu	37	1	155149421	155149421	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM49L	729384	broad.mit.edu	37	11	89644601	89644601	+	3'UTR	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM50	135892	broad.mit.edu	37	7	72733986	72733986	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM63	84676	broad.mit.edu	37	1	26384853	26384853	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM71	131405	broad.mit.edu	37	3	32915240	32915240	+	Intron	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIML1	339976	broad.mit.edu	37	4	189065159	189065159	+	Intron	SNP	C	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIOBP	11078	broad.mit.edu	37	22	38167693	38167693	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRMT2B	79979	broad.mit.edu	37	X	100276204	100276204	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPC1	7220	broad.mit.edu	37	3	142499891	142499891	+	Intron	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM3	80036	broad.mit.edu	37	9	73218314	73218314	+	Missense_Mutation	SNP	G	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM3	80036	broad.mit.edu	37	9	73442844	73442844	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM4	54795	broad.mit.edu	37	19	49661459	49661459	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM8	79054	broad.mit.edu	37	2	234835313	234835313	+	Intron	SNP	A	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPV4	59341	broad.mit.edu	37	12	110236392	110236392	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRRAP	8295	broad.mit.edu	37	7	98508155	98508155	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRRAP	8295	broad.mit.edu	37	7	98596666	98596666	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRYX3	136541	broad.mit.edu	37	7	141955123	141955123	+	Missense_Mutation	SNP	C	A	A	rs138718517		TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSC1	7248	broad.mit.edu	37	9	135786398	135786398	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSPAN11	441631	broad.mit.edu	37	12	31116703	31116703	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSPAN11	441631	broad.mit.edu	37	12	31116966	31116966	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSPAN17	26262	broad.mit.edu	37	5	176078805	176078805	+	Silent	SNP	C	A	A	rs35207938	byFrequency	TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC27	55622	broad.mit.edu	37	2	32961790	32961790	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC5	91875	broad.mit.edu	37	14	20773928	20773928	+	Intron	SNP	A	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC7B	145567	broad.mit.edu	37	14	91044751	91044751	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC7B	145567	broad.mit.edu	37	14	91077093	91077093	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTLL11	158135	broad.mit.edu	37	9	124751870	124751870	+	Missense_Mutation	SNP	G	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTLL5	23093	broad.mit.edu	37	14	76330170	76330170	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179410892	179410892	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179451811	179451811	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179457751	179457751	+	Missense_Mutation	SNP	G	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179554580	179554580	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179605489	179605489	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTYH2	94015	broad.mit.edu	37	17	72246134	72246134	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBB4Q	56604	broad.mit.edu	37	4	190904008	190904008	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBB8	347688	broad.mit.edu	37	10	94014	94014	+	Nonsense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBGCP5	114791	broad.mit.edu	37	15	22867641	22867641	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUFT1	7286	broad.mit.edu	37	1	151530033	151530033	+	Intron	SNP	G	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UACA	55075	broad.mit.edu	37	15	70961405	70961405	+	Missense_Mutation	SNP	C	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBA1	7317	broad.mit.edu	37	X	47071826	47071826	+	Missense_Mutation	SNP	A	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBA7	7318	broad.mit.edu	37	3	49847961	49847961	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBA7	7318	broad.mit.edu	37	3	49850106	49850106	+	Missense_Mutation	SNP	G	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBAP2L	9898	broad.mit.edu	37	1	154229622	154229622	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBAP2L	9898	broad.mit.edu	37	1	154238973	154238973	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBAP2L	9898	broad.mit.edu	37	1	154242713	154242713	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBC	7316	broad.mit.edu	37	12	125397360	125397360	+	Nonsense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE2J2	118424	broad.mit.edu	37	1	1190786	1190786	+	Missense_Mutation	SNP	C	A	A	rs147742881		TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE2O	63893	broad.mit.edu	37	17	74394977	74394977	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE3A	7337	broad.mit.edu	37	15	25620797	25620797	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE3B	89910	broad.mit.edu	37	12	109921558	109921558	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UFC1	51506	broad.mit.edu	37	1	161126807	161126807	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UFC1	51506	broad.mit.edu	37	1	161127932	161127932	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT3A1	133688	broad.mit.edu	37	5	35955884	35955884	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT3A2	167127	broad.mit.edu	37	5	36038148	36038149	+	Intron	DNP	CT	AA	AA			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ULK2	9706	broad.mit.edu	37	17	19699554	19699554	+	Silent	SNP	G	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ULK2	9706	broad.mit.edu	37	17	19720108	19720108	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC13B	10497	broad.mit.edu	37	9	35390017	35390017	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC5B	219699	broad.mit.edu	37	10	73050588	73050588	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC5D	137970	broad.mit.edu	37	8	35542045	35542045	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
URB2	9816	broad.mit.edu	37	1	229772860	229772860	+	Missense_Mutation	SNP	G	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
URGCP	55665	broad.mit.edu	37	7	43958576	43958576	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216050950	216050950	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP21	27005	broad.mit.edu	37	1	161131966	161131966	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP22	23326	broad.mit.edu	37	17	20906349	20906349	+	Nonsense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP31	57478	broad.mit.edu	37	16	23080432	23080432	+	Silent	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP32	84669	broad.mit.edu	37	17	58259005	58259005	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP32	84669	broad.mit.edu	37	17	58299831	58299831	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP34	9736	broad.mit.edu	37	2	61447538	61447538	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP5	8078	broad.mit.edu	37	12	6970341	6970341	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP6	9098	broad.mit.edu	37	17	5066291	5066291	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTRN	7402	broad.mit.edu	37	6	144759780	144759780	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTRN	7402	broad.mit.edu	37	6	144838074	144838074	+	Missense_Mutation	SNP	A	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	27620457	27620457	+	IGR	SNP	A	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	32391364	32391364	+	IGR	SNP	T	A	A	rs147939218	by1000genomes	TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	36811999	36811999	+	IGR	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	37284427	37284427	+	IGR	SNP	T	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	38894615	38894615	+	IGR	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	52025001	52025001	+	IGR	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	52443415	52443415	+	IGR	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	95043771	95043771	+	IGR	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	127811661	127811661	+	IGR	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49010751	49010751	+	IGR	DEL	C	-	-			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49854766	49854766	+	IGR	SNP	T	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	50227298	50227298	+	IGR	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55086313	55086313	+	IGR	SNP	G	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	57995286	57995286	+	IGR	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	58155701	58155701	+	IGR	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	58861566	58861566	+	IGR	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	59259325	59259325	+	IGR	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	74782655	74782655	+	IGR	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	82516417	82516417	+	IGR	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	34319354	34319354	+	IGR	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	37938491	37938491	+	IGR	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	43965124	43965124	+	IGR	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	56775743	56775743	+	IGR	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	63396463	63396463	+	IGR	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	80423297	80423297	+	IGR	SNP	G	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	80655932	80655932	+	IGR	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	19393386	19393386	+	IGR	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	29298107	29298107	+	IGR	SNP	C	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	60849558	60849558	+	IGR	SNP	G	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	61211483	61211483	+	IGR	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	66362446	66362446	+	IGR	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	88542872	88542872	+	IGR	SNP	T	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	91924836	91924836	+	IGR	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20084894	20084894	+	IGR	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	21622989	21622989	+	IGR	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	35163787	35163787	+	IGR	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	44010281	44010281	+	IGR	SNP	G	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	92582406	92582406	+	IGR	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	95098276	95098276	+	IGR	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	95100526	95100526	+	IGR	SNP	C	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	96103280	96103280	+	IGR	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	20086597	20086597	+	IGR	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	20170068	20170069	+	IGR	DNP	TC	AT	AT			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	22482839	22482839	+	IGR	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	25826251	25826251	+	IGR	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	80253228	80253228	+	IGR	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	20601931	20601931	+	IGR	SNP	C	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32369700	32369700	+	IGR	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32621160	32621160	+	IGR	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33401345	33401345	+	IGR	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33401948	33401948	+	IGR	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33408439	33408439	+	IGR	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33605135	33605135	+	IGR	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33768543	33768543	+	IGR	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	34654683	34654683	+	IGR	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	34956663	34956663	+	IGR	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	72038209	72038209	+	IGR	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	10764243	10764243	+	IGR	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	17326374	17326374	+	IGR	SNP	G	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	20387161	20387161	+	IGR	SNP	A	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	20651718	20651718	+	IGR	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	33734117	33734117	+	IGR	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	48313118	48313118	+	IGR	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	52031591	52031591	+	IGR	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	11644569	11644569	+	IGR	SNP	A	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	47750	47750	+	IGR	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	19945900	19945900	+	IGR	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	22792870	22792870	+	IGR	SNP	T	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	36448204	36448204	+	IGR	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	53202337	53202337	+	IGR	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	146523499	146523499	+	IGR	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	146586951	146586951	+	IGR	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	147313410	147313410	+	IGR	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	148903142	148903142	+	IGR	SNP	G	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	152595302	152595302	+	IGR	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	157679126	157679126	+	IGR	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	158423948	158423948	+	IGR	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	158424217	158424217	+	IGR	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	158548641	158548641	+	IGR	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	158850645	158850645	+	IGR	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	160865303	160865303	+	IGR	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	192963483	192963483	+	IGR	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	194158420	194158420	+	IGR	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	203924928	203924928	+	IGR	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	209406565	209406565	+	IGR	DEL	G	-	-			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	79520899	79520899	+	IGR	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	32801783	32801783	+	IGR	DEL	T	-	-			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	10899090	10899090	+	IGR	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	10899688	10899688	+	IGR	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	11181024	11181025	+	IGR	DEL	CG	-	-	rs2078271	by1000genomes	TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	14899358	14899358	+	IGR	SNP	C	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	20230215	20230215	+	IGR	SNP	G	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	32433455	32433455	+	IGR	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	16353473	16353474	+	IGR	DNP	TG	AA	AA			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	17340564	17340564	+	IGR	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	43181823	43181823	+	IGR	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	111119759	111119759	+	IGR	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	113379795	113379795	+	IGR	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	130751530	130751530	+	IGR	SNP	C	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	130751711	130751711	+	IGR	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	130970691	130970691	+	IGR	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	132349687	132349687	+	IGR	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	133019070	133019070	+	IGR	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	140426555	140426556	+	IGR	INS	-	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	17466203	17466203	+	IGR	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	175175147	175175147	+	IGR	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	187867600	187867600	+	IGR	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	194141527	194141527	+	IGR	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	194141592	194141592	+	IGR	SNP	C	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	210043710	210043710	+	IGR	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	38044752	38044752	+	IGR	SNP	C	A	A	rs35652469		TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	81424683	81424683	+	IGR	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90458672	90458672	+	IGR	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91766427	91766427	+	IGR	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91800729	91800729	+	IGR	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91800961	91800961	+	IGR	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91893798	91893798	+	IGR	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	92075604	92075604	+	IGR	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	92145379	92145379	+	IGR	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	133910783	133910783	+	IGR	SNP	T	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	137599383	137599383	+	IGR	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	183606238	183606238	+	IGR	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	18580351	18580351	+	IGR	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	26057666	26057666	+	IGR	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	31494791	31494791	+	IGR	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	36810105	36810105	+	IGR	SNP	T	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	54082098	54082098	+	IGR	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	54082104	54082104	+	IGR	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	90251660	90251660	+	IGR	SNP	G	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	96068470	96068470	+	IGR	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	96472789	96472789	+	IGR	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	125384888	125384888	+	IGR	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	135967582	135967582	+	IGR	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	136292902	136292902	+	IGR	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	26113670	26113670	+	IGR	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	70261563	70261563	+	IGR	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	70280891	70280891	+	IGR	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	8176590	8176590	+	IGR	SNP	T	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	107061314	107061314	+	IGR	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	114727032	114727032	+	IGR	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	136193796	136193796	+	IGR	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	154871523	154871523	+	IGR	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	156507588	156507588	+	IGR	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	170793239	170793239	+	IGR	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	18049647	18049647	+	IGR	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	25910415	25910415	+	IGR	SNP	T	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	30365671	30365671	+	IGR	SNP	T	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	32523742	32523742	+	IGR	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	716876	716876	+	IGR	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	100625436	100625436	+	IGR	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	112682726	112682726	+	IGR	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	122005043	122005043	+	IGR	SNP	A	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	161326809	161326809	+	IGR	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	66547169	66547169	+	IGR	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	85997436	85997436	+	IGR	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	85997478	85997478	+	IGR	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	119694280	119694280	+	IGR	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	144708084	144708084	+	IGR	SNP	C	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	144737126	144737126	+	IGR	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	144737588	144737588	+	IGR	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	18001857	18001857	+	IGR	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	36011095	36011095	+	IGR	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	55004094	55004094	+	IGR	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	55780247	55780247	+	IGR	SNP	C	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	56243667	56243667	+	IGR	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	56635791	56635791	+	IGR	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	57128968	57128968	+	IGR	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	82286478	82286478	+	IGR	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	43126322	43126322	+	IGR	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	47491641	47491641	+	IGR	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	71012914	71012914	+	IGR	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	103493952	103493952	+	IGR	SNP	C	A	A	rs115515783	by1000genomes	TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	103494243	103494243	+	IGR	SNP	T	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	30773560	30773560	+	IGR	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	36021856	36021856	+	IGR	SNP	T	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	37637149	37637149	+	IGR	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	68357312	68357312	+	IGR	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	69830317	69830317	+	IGR	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	76090747	76090747	+	IGR	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	76263876	76263876	+	IGR	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	90796186	90796186	+	IGR	SNP	A	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	95683435	95683435	+	IGR	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	122648428	122648428	+	IGR	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	127260984	127260984	+	IGR	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	134743531	134743531	+	IGR	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	142760821	142760821	+	IGR	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	145701609	145701609	+	IGR	SNP	G	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	155058422	155058422	+	IGR	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	52639505	52639505	+	IGR	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	52641799	52641799	+	IGR	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	89368227	89368227	+	IGR	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAC14	55697	broad.mit.edu	37	16	70815870	70815870	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VANGL2	57216	broad.mit.edu	37	1	160395211	160395211	+	3'UTR	SNP	A	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VASP	7408	broad.mit.edu	37	19	46029422	46029422	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAV3	10451	broad.mit.edu	37	1	108298001	108298001	+	Intron	SNP	C	A	A	rs72979653	by1000genomes	TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAX1	11023	broad.mit.edu	37	10	118897308	118897308	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VEZF1	7716	broad.mit.edu	37	17	56051993	56051993	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VIPAR	63894	broad.mit.edu	37	14	77914970	77914970	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VIT	5212	broad.mit.edu	37	2	37035794	37035794	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS11	55823	broad.mit.edu	37	11	118951866	118951866	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13D	55187	broad.mit.edu	37	1	12339553	12339553	+	Intron	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS33A	65082	broad.mit.edu	37	12	122735531	122735531	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS41	27072	broad.mit.edu	37	7	38835001	38835001	+	Intron	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS45	11311	broad.mit.edu	37	1	150044161	150044161	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VWA3B	200403	broad.mit.edu	37	2	98809316	98809316	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WBSCR16	81554	broad.mit.edu	37	7	74470047	74470047	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WBSCR17	64409	broad.mit.edu	37	7	71036284	71036284	+	Missense_Mutation	SNP	T	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WBSCR28	135886	broad.mit.edu	37	7	73279413	73279413	+	Silent	SNP	C	A	A	rs118088869	by1000genomes	TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDFY2	115825	broad.mit.edu	37	13	52293449	52293449	+	Silent	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDFY3	23001	broad.mit.edu	37	4	85748105	85748105	+	Missense_Mutation	SNP	T	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR12	55759	broad.mit.edu	37	2	203748904	203748904	+	Intron	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR12	55759	broad.mit.edu	37	2	203776157	203776157	+	Intron	SNP	A	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR63	126820	broad.mit.edu	37	1	85583460	85583460	+	Missense_Mutation	SNP	C	A	A	rs142129983	byFrequency	TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR66	144406	broad.mit.edu	37	12	122396317	122396317	+	Missense_Mutation	SNP	G	T	T	rs79320015	by1000genomes	TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR75	84128	broad.mit.edu	37	2	190327291	190327291	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WIPF1	7456	broad.mit.edu	37	2	175436859	175436859	+	Missense_Mutation	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNT5B	81029	broad.mit.edu	37	12	1740617	1740617	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNT5B	81029	broad.mit.edu	37	12	1742120	1742120	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNT7A	7476	broad.mit.edu	37	3	13916469	13916469	+	Silent	SNP	G	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WSCD2	9671	broad.mit.edu	37	12	108642021	108642021	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WWP2	11060	broad.mit.edu	37	16	69922135	69922135	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPC	7508	broad.mit.edu	37	3	14199735	14199735	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPR1	9213	broad.mit.edu	37	1	180794374	180794374	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YARS2	51067	broad.mit.edu	37	12	32902875	32902875	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YARS2	51067	broad.mit.edu	37	12	32908083	32908083	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YME1L1	10730	broad.mit.edu	37	10	27412570	27412570	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YTHDC2	64848	broad.mit.edu	37	5	112903427	112903427	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YWHAQ	10971	broad.mit.edu	37	2	9770211	9770211	+	Intron	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YY1AP1	55249	broad.mit.edu	37	1	155650064	155650064	+	Intron	SNP	G	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB7B	51043	broad.mit.edu	37	1	154987589	154987589	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZCCHC8	55596	broad.mit.edu	37	12	122958465	122958465	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZDHHC8	29801	broad.mit.edu	37	22	20128602	20128602	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZEB2	9839	broad.mit.edu	37	2	145182048	145182048	+	Intron	SNP	A	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFAND3	60685	broad.mit.edu	37	6	38120042	38120042	+	Silent	SNP	C	A	A	rs142374943	byFrequency	TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFC3H1	196441	broad.mit.edu	37	12	72004128	72004128	+	3'UTR	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFC3H1	196441	broad.mit.edu	37	12	72004453	72004453	+	Intron	SNP	A	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX4	79776	broad.mit.edu	37	8	77616851	77616851	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX4	79776	broad.mit.edu	37	8	77618638	77618638	+	Missense_Mutation	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX4	79776	broad.mit.edu	37	8	77690582	77690582	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFP64	55734	broad.mit.edu	37	20	50713782	50713782	+	Intron	SNP	A	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFP90	146198	broad.mit.edu	37	16	68597524	68597524	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFR	51663	broad.mit.edu	37	5	32397267	32397267	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZKSCAN4	387032	broad.mit.edu	37	6	28217607	28217607	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMIZ2	83637	broad.mit.edu	37	7	44807180	44807180	+	Silent	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMYND8	23613	broad.mit.edu	37	20	45891056	45891056	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF142	7701	broad.mit.edu	37	2	219508601	219508601	+	Missense_Mutation	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF160	90338	broad.mit.edu	37	19	53578432	53578432	+	Missense_Mutation	SNP	C	A	A	rs329709	byFrequency;by1000genomes	TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF33B	7582	broad.mit.edu	37	10	43089515	43089515	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF385D	79750	broad.mit.edu	37	3	21462854	21462854	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF3	7551	broad.mit.edu	37	7	99672813	99672813	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF410	57862	broad.mit.edu	37	14	74388843	74388843	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF436	80818	broad.mit.edu	37	1	23688528	23688528	+	Silent	SNP	G	T	T	rs144729139		TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF43	7594	broad.mit.edu	37	19	22000695	22000695	+	Missense_Mutation	SNP	G	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF442	79973	broad.mit.edu	37	19	12462999	12462999	+	Intron	SNP	C	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF454	285676	broad.mit.edu	37	5	178392832	178392833	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF461	92283	broad.mit.edu	37	19	37147408	37147408	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF467	168544	broad.mit.edu	37	7	149463300	149463300	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF492	57615	broad.mit.edu	37	19	22817391	22817391	+	Intron	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF492	57615	broad.mit.edu	37	19	22836706	22836706	+	Intron	DEL	A	-	-			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF496	84838	broad.mit.edu	37	1	247492767	247492767	+	Silent	SNP	G	T	T	rs144794714	byFrequency	TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF510	22869	broad.mit.edu	37	9	99521411	99521411	+	Silent	SNP	C	A	A	rs149138912		TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF518B	85460	broad.mit.edu	37	4	10446934	10446934	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF518B	85460	broad.mit.edu	37	4	10447805	10447805	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF530	348327	broad.mit.edu	37	19	58111530	58111530	+	Intron	SNP	C	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF536	9745	broad.mit.edu	37	19	31039467	31039467	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF652	22834	broad.mit.edu	37	17	47394798	47394798	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF692	55657	broad.mit.edu	37	1	249152029	249152029	+	Missense_Mutation	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF713	349075	broad.mit.edu	37	7	56006625	56006625	+	Intron	SNP	G	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF713	349075	broad.mit.edu	37	7	56007028	56007028	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF721	170960	broad.mit.edu	37	4	466365	466365	+	Silent	SNP	T	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF746	155061	broad.mit.edu	37	7	149191248	149191248	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF777	27153	broad.mit.edu	37	7	149152656	149152656	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF782	158431	broad.mit.edu	37	9	99580855	99580855	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF786	136051	broad.mit.edu	37	7	148767723	148767723	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF7	7553	broad.mit.edu	37	8	146062736	146062736	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF804A	91752	broad.mit.edu	37	2	185801036	185801036	+	Missense_Mutation	SNP	G	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF813	126017	broad.mit.edu	37	19	53994510	53994510	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF816A	125893	broad.mit.edu	37	19	53454623	53454623	+	Missense_Mutation	SNP	C	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF831	128611	broad.mit.edu	37	20	57768084	57768084	+	Silent	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF836	162962	broad.mit.edu	37	19	52658909	52658909	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF99	7652	broad.mit.edu	37	19	22939010	22939010	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSCAN21	7589	broad.mit.edu	37	7	99654933	99654933	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSWIM5	57643	broad.mit.edu	37	1	45486330	45486330	+	Silent	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	31112989	31112989	+	Missense_Mutation	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	24737262	24737262	+	5'Flank	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	31297898	31297898	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	31303168	31303168	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22217543	22217543	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22466300	22466300	+	Intron	SNP	A	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22970647	22970647	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22987458	22987458	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	20490649	20490649	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	22473103	22473103	+	RNA	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	25427653	25427653	+	Intron	SNP	G	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	29107407	29107407	+	Intron	SNP	C	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	29107431	29107431	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33783406	33783406	+	5'Flank	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	35037458	35037458	+	5'Flank	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	90161582	90161582	+	Missense_Mutation	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	90161597	90161597	+	Missense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	90162240	90162240	+	3'UTR	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	20851730	20851730	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	23433002	23433002	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	9801313	9801313	+	Nonsense_Mutation	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	146791910	146791910	+	Intron	SNP	A	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	148882027	148882027	+	RNA	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	28739683	28739683	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	17385617	17385617	+	5'Flank	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	20724339	20724339	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89442418	89442418	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89575447	89575447	+	Intron	SNP	A	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89976536	89976536	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90139360	90139360	+	RNA	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90199023	90199023	+	RNA	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	96593300	96593300	+	Intron	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	85166071	85166071	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	85166538	85166538	+	Intron	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	24170583	24170583	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	1515533	1515533	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142231743	142231743	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142242454	142242454	+	Intron	SNP	G	C	C			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142326540	142326540	+	Intron	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142334497	142334497	+	Intron	SNP	G	T	T	rs113436718		TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142471731	142471731	+	Intron	SNP	A	G	G			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63370778	63370778	+	Intron	SNP	C	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	86568040	86568040	+	5'Flank	SNP	T	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	86568086	86568086	+	5'Flank	SNP	G	T	T			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	78943040	78943040	+	Silent	SNP	C	A	A			TCGA-91-6836-01A-21D-1855-08	TCGA-91-6836-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
