Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ACACA	31	genome.wustl.edu	37	17	35454000	35454000	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	17	35454000	35454000	A	G	SNP	ACACA	NM_198834.1	human	genbank	58_37c	-1	reviewed	silent	c.6822	p.P2274	0.994	superfamily_SSF52096	HMMPfam_Carboxyl_trans,HMMPfam_Biotin_lipoyl,PatternScan_BIOTIN,HMMPfam_CPSase_L_D2,PatternScan_CPSASE_1,PatternScan_CPSASE_2,HMMPfam_CPSase_L_chain,HMMPfam_Biotin_carb_C,superfamily_Hybrid_motif,superfamily_Rudmnt_hyb_motif,HMMPfam_ACC_central,superfamily_PreATP-grasp-like,superfamily_SSF52096,superfamily_SSF56059	-	no_errors
ACSS1	84532	genome.wustl.edu	37	20	24988539	24988539	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	20	24988539	24988539	G	A	SNP	ACSS1	NM_032501.2	human	genbank	58_37c	-1	reviewed	silent	c.1929	p.V643	1.000	superfamily_Acetyl-CoA synthetase-like	HMMPfam_AMP-binding,PatternScan_AMP_BINDING,superfamily_Acetyl-CoA synthetase-like	-	no_errors
ALS2	57679	genome.wustl.edu	37	2	202606414	202606414	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	2	202606414	202606414	G	C	SNP	ALS2	NM_020919.3	human	genbank	58_37c	-1	reviewed	missense	c.2334	p.F778L	1.000	superfamily_DBL homology domain (DH-domain)	superfamily_DBL homology domain (DH-domain),PatternScan_RCC1_2,HMMPfam_VPS9,HMMPfam_MORN,HMMSmart_SM00698,superfamily_RCC1/BLIP-II,superfamily_VPS9 domain (Pfam 02204),superfamily_PH domain-like,superfamily_Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain	-	no_errors
ARMCX1	51309	genome.wustl.edu	37	X	100809228	100809228	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	X	100809228	100809228	G	A	SNP	ARMCX1	NM_016608.1	human	genbank	58_37c	+1	reviewed	missense	c.1315	p.D439N	0.997	HMMPfam_DUF634,superfamily_ARM-type_fold	HMMPfam_DUF634,superfamily_ARM-type_fold	-	no_errors
C17orf71	55181	genome.wustl.edu	37	17	57288244	57288244	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	17	57288244	57288244	G	C	SNP	C17orf71	NM_018149.6	human	genbank	58_37c	+1	validated	missense	c.832	p.E278Q	0.985	HMMPfam_DUF2146	HMMPfam_DUF2146	-	no_errors
C20orf96	140680	genome.wustl.edu	37	20	259038	259038	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	20	259038	259038	C	T	SNP	C20orf96	NM_153269.1	human	genbank	58_37c	-1	predicted	silent	c.498	p.K166	0.414	NULL	NULL	-	no_errors
C4orf14	84273	genome.wustl.edu	37	4	57842681	57842681	+	Silent	SNP	C	C	G	novel	unknown	TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	4	57842681	57842681	C	G	SNP	C4orf14	NM_032313.2	human	genbank	58_37c	-1	provisional	silent	c.1071	p.T357	0.982	HMMPfam_MMR_HSR1,superfamily_SSF52540	HMMPfam_MMR_HSR1,superfamily_SSF52540	-	no_errors
CAMSAP1	157922	genome.wustl.edu	37	9	138714836	138714836	+	Silent	SNP	C	C	A	rs144214856	byFrequency	TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	9	138714836	138714836	C	A	SNP	CAMSAP1	NM_015447.3	human	genbank	58_37c	-1	validated	silent	c.1671	p.P557	0.000	NULL	superfamily_PRC-barrel domain,HMMPfam_DUF1781,superfamily_Calponin-homology domain CH-domain	-	no_errors
CCDC138	165055	genome.wustl.edu	37	2	109489964	109489964	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	2	109489964	109489964	C	G	SNP	CCDC138	NM_144978.1	human	genbank	58_37c	+1	provisional	missense	c.1751	p.S584C	0.982	NULL	NULL	-	no_errors
CCNA2	890	genome.wustl.edu	37	4	122740585	122740585	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	4	122740585	122740585	A	G	SNP	CCNA2	NM_001237.3	human	genbank	58_37c	-1	validated	missense	c.944	p.L315P	1.000	HMMPfam_Cyclin_C,HMMSmart_SM00385,superfamily_Cyclin-like	HMMPfam_Cyclin_C,HMMSmart_SM00385,HMMPfam_Cyclin_N,PatternScan_CYCLINS,superfamily_Cyclin-like	-	no_errors
CTTN	2017	genome.wustl.edu	37	11	70256029	70256029	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	11	70256029	70256029	G	C	SNP	CTTN	NM_005231.3	human	genbank	58_37c	+1	reviewed	missense	c.254	p.G85A	1.000	HMMPfam_HS1_rep	HMMPfam_SH3_1,HMMSmart_SH3,superfamily_SH3,HMMPfam_HS1_rep	-	no_errors
CUL9	23113	genome.wustl.edu	37	6	43155717	43155717	+	Silent	SNP	C	C	T	rs142314571	unknown	TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	6	43155717	43155717	C	T	SNP	CUL9	NM_015089.2	human	genbank	58_37c	+1	validated	silent	c.1848	p.A616	0.003	NULL	"HMMPfam_Cullin,HMMPfam_IBR,HMMSmart_SM00647,HMMPfam_APC10,superfamily_Galactose-binding domain-like,superfamily_ARM repeat,PatternScan_CULLIN_1,superfamily_Cullin homology domain,PatternScan_ZF_RING_1,PatternScan_CYTOCHROME_P450,superfamily_""Winged helix"" DNA-binding domain,superfamily_RING/U-box"	-	no_errors
DUSP6	1848	genome.wustl.edu	37	12	89743172	89743172	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	12	89743172	89743172	G	A	SNP	DUSP6	NM_001946.2	human	genbank	58_37c	-1	reviewed	silent	c.1005	p.N335	1.000	HMMPfam_DSPc,HMMSmart_SM00195,superfamily_(Phosphotyrosine protein) phosphatases II	HMMPfam_DSPc,HMMPfam_Rhodanese,HMMSmart_SM00450,superfamily_Rhodanese/Cell cycle control phosphatase,HMMSmart_SM00195,superfamily_(Phosphotyrosine protein) phosphatases II	-	no_errors
DYNC1H1	1778	genome.wustl.edu	37	14	102481649	102481649	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	14	102481649	102481649	G	A	SNP	DYNC1H1	NM_001376.4	human	genbank	58_37c	+1	reviewed	missense	c.7222	p.A2408T	1.000	superfamily_SSF52540	HMMSmart_AAA,HMMPfam_Dynein_heavy,HMMPfam_AAA_5,HMMPfam_DHC_N1,HMMPfam_DHC_N2,superfamily_SSF52540	-	no_errors
ENSG00000247145	0	genome.wustl.edu	37	10	99153675	99153675	+	RNA	SNP	G	G	C	novel	unknown	TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	10	99153675	99153675	G	C	SNP	RRP12	NM_015179.3	human	genbank	58_37c	-1	validated	intronic	c.454-158	e4-158	0.000	-	-	-	no_errors
EPHA3	2042	genome.wustl.edu	37	3	89448571	89448571	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	3	89448571	89448571	G	A	SNP	EPHA3	NM_005233.5	human	genbank	58_37c	+1	reviewed	missense	c.1535	p.R512Q	1.000	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III	HMMPfam_Ephrin_lbd,HMMSmart_SM00615,HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,PatternScan_RECEPTOR_TYR_KIN_V_1,PatternScan_RECEPTOR_TYR_KIN_V_2,HMMSmart_SM00454,HMMSmart_SM00220,HMMPfam_fn3,HMMSmart_SM00060,PatternScan_PROTEIN_KINASE_TYR,superfamily_Fibronectin type III,superfamily_Galactose-binding domain-like,superfamily_SAM/Pointed domain,superfamily_Protein kinase-like (PK-like),HMMPfam_SAM_2,PatternScan_EGF_2,PatternScan_PROTEIN_KINASE_ATP	-	no_errors
FANCL	55120	genome.wustl.edu	37	2	58456952	58456952	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	2	58456952	58456952	T	A	SNP	FANCL	NM_001114636.1	human	genbank	58_37c	-1	reviewed	missense	c.213	p.Q71H	0.883	NULL	HMMPfam_WD-3,superfamily_RING/U-box	-	no_errors
GIGYF1	64599	genome.wustl.edu	37	7	100280053	100280053	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	7	100280053	100280053	C	T	SNP	GIGYF1	NM_022574.4	human	genbank	58_37c	-1	validated	missense	c.2653	p.E885K	1.000	NULL	HMMPfam_GYF,HMMSmart_GYF,superfamily_GYF	-	no_errors
GLI2	2736	genome.wustl.edu	37	2	121726426	121726426	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	2	121726426	121726426	C	G	SNP	GLI2	NM_005270.4	human	genbank	58_37c	+1	reviewed	missense	c.780	p.I260M	1.000	NULL	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
GNPTAB	79158	genome.wustl.edu	37	12	102164928	102164928	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	12	102164928	102164928	A	-	DEL	GNPTAB	NM_024312.4	human	genbank	58_37c	-1	reviewed	frame_shift_del	c.779	p.L260fs	1.000	NULL	HMMPfam_Notch,HMMSmart_SM00004,superfamily_Notch domain,HMMPfam_DMAP_binding,PatternScan_EF_HAND_1	-	no_errors
HOOK2	29911	genome.wustl.edu	37	19	12874242	12874242	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	19	12874242	12874242	T	-	DEL	HOOK2	NM_013312.2	human	genbank	58_37c	-1	validated	frame_shift_del	c.2014	p.M672fs	0.993	HMMPfam_HOOK	HMMPfam_HOOK	-	no_errors
IL11RA	3590	genome.wustl.edu	37	9	34655616	34655616	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	9	34655616	34655616	C	T	SNP	IL11RA	NM_001142784.1	human	genbank	58_37c	+1	reviewed	nonsense	c.115	p.Q39*	1.000	HMMSmart_SM00409,superfamily_Immunoglobulin	PatternScan_HEMATOPO_REC_L_F3,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,HMMPfam_ig,superfamily_Immunoglobulin	-	no_errors
KIAA1267	284058	genome.wustl.edu	37	17	44117113	44117113	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	17	44117113	44117113	G	-	DEL	KIAA1267	NM_015443.2	human	genbank	58_37c	-1	validated	frame_shift_del	c.2158	p.R720fs	0.996	NULL	NULL	-	no_errors
KRT2	3849	genome.wustl.edu	37	12	53040550	53040550	+	Silent	SNP	G	G	T	novel	unknown	TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	12	53040550	53040550	G	T	SNP	KRT2	NM_000423.2	human	genbank	58_37c	-1	reviewed	silent	c.1443	p.R481	0.886	HMMPfam_Filament,PatternScan_IF	HMMPfam_Filament,PatternScan_IF	-	no_errors
KTN1	3895	genome.wustl.edu	37	14	56130713	56130713	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	14	56130713	56130713	C	T	SNP	KTN1	NM_001079521.1	human	genbank	58_37c	+1	validated	missense	c.3131	p.A1044V	1.000	NULL	superfamily_Spectrin repeat	-	no_errors
LASS6	253782	genome.wustl.edu	37	2	169312982	169312982	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	2	169312982	169312982	C	G	SNP	LASS6	NM_203463.1	human	genbank	58_37c	+1	validated	missense	c.24	p.F8L	1.000	NULL	HMMPfam_Homeobox,HMMSmart_HOX,HMMPfam_TRAM_LAG1_CLN8,HMMSmart_TLC,superfamily_Homeodomain_like,PatternScan_HOMEOBOX_1	-	no_errors
LEPREL1	55214	genome.wustl.edu	37	3	189705453	189705453	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	3	189705453	189705453	C	T	SNP	LEPREL1	NM_018192.3	human	genbank	58_37c	-1	validated	missense	c.961	p.E321K	0.935	superfamily_TPR-like	HMMPfam_2OG-FeII_Oxy,HMMSmart_SM00702,superfamily_TPR-like	-	no_errors
LOC100289195	0	genome.wustl.edu	37	6	160879771	160879771	+	Missense_Mutation	SNP	C	C	T	rs182999652	by1000genomes	TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	6	160879771	160879771	C	T	SNP	LOC100289195	XM_002342678.1	human	genbank	58_37c	-1	model	missense	c.322	p.V108I	0.000	HMMSmart_SM00020	HMMPfam_Kringle,HMMSmart_SM00130,HMMPfam_Trypsin,HMMSmart_SM00020,superfamily_Trypsin-like serine proteases,superfamily_Kringle-like,PatternScan_KRINGLE_1,PatternScan_TRYPSIN_SER	-	no_errors
LOC643699	643699	genome.wustl.edu	37	15	30700459	30700459	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	15	30700459	30700459	C	T	SNP	LOC643699	XM_926998.2	human	genbank	58_37c	-1	model	missense	c.718	p.E240K	0.637	NULL	NULL	-	no_errors
MAX	4149	genome.wustl.edu	37	14	65568302	65568302	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	14	65568302	65568302	G	A	SNP	MAX	ENST00000441116	human	ensembl	58_37c	-1	known	missense	c.46	p.L16F	1.000	NULL	HMMPfam_HLH,HMMSmart_SM00353,superfamily_HLH helix-loop-helix DNA-binding domain	-	no_errors
MCM3AP	8888	genome.wustl.edu	37	21	47692480	47692480	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	21	47692480	47692480	G	A	SNP	MCM3AP	NM_003906.3	human	genbank	58_37c	-1	reviewed	silent	c.2460	p.I820	0.997	HMMPfam_SAC3_GANP	HMMPfam_SAC3_GANP,superfamily_SSF54928	-	no_errors
MOV10	4343	genome.wustl.edu	37	1	113240703	113240703	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	1	113240703	113240703	C	T	SNP	MOV10	NM_001130079.1	human	genbank	58_37c	+1	validated	silent	c.2286	p.R762	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases	PatternScan_ER_TARGET,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
MPP3	4356	genome.wustl.edu	37	17	41888280	41888280	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	17	41888280	41888280	G	T	SNP	MPP3	NM_001932.3	human	genbank	58_37c	-1	reviewed	missense	c.1353	p.F451L	1.000	HMMPfam_Guanylate_kin,HMMSmart_SM00072,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMSmart_SM00326,superfamily_SH3-domain,HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like,HMMSmart_SM00569,HMMPfam_Guanylate_kin,HMMSmart_SM00072,HMMPfam_SH3_2,HMMPfam_L27,PatternScan_GUANYLATE_KINASE_1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
MSL3	10943	genome.wustl.edu	37	X	11783719	11783719	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	X	11783719	11783719	C	T	SNP	MSL3	NM_078629.2	human	genbank	58_37c	+1	reviewed	silent	c.1042	p.L348	0.999	HMMPfam_MRG	HMMSmart_SM00298,HMMPfam_MRG	-	no_errors
MUC4	4585	genome.wustl.edu	37	3	195492266	195492266	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	3	195492266	195492266	C	T	SNP	MUC4	NM_018406.5	human	genbank	58_37c	-1	reviewed	missense	c.13289	p.R4430H	0.997	HMMPfam_AMOP,HMMSmart_SM00723	HMMPfam_VWD,HMMSmart_SM00216,HMMPfam_NIDO,HMMSmart_SM00539,HMMPfam_AMOP,HMMSmart_SM00723,PatternScan_SUGAR_TRANSPORT_2,HMMSmart_SM00181,PatternScan_EGF_1,superfamily_EGF/Laminin	-	no_errors
NFAT5	10725	genome.wustl.edu	37	16	69726520	69726521	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	16	69726520	69726521	-	A	INS	NFAT5	NM_138713.2	human	genbank	58_37c	+1	reviewed	frame_shift_ins	c.2792_2793	p.E932fs	0.998:0.206	NULL	HMMPfam_TIG,HMMSmart_SM00429,superfamily_p53-like transcription factors,HMMPfam_RHD,superfamily_E set domains	-	no_errors
OR2T34	127068	genome.wustl.edu	37	1	248737930	248737930	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	1	248737930	248737930	G	A	SNP	OR2T34	NM_001001821.1	human	genbank	58_37c	-1	provisional	silent	c.129	p.A43	0.020	superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
OTOP1	133060	genome.wustl.edu	37	4	4199564	4199564	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	4	4199564	4199564	G	A	SNP	OTOP1	NM_177998.1	human	genbank	58_37c	-1	provisional	silent	c.997	p.L333	0.841	HMMPfam_DUF270	HMMPfam_DUF270	-	no_errors
PIK3CA	0	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	A	G			TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	3	178952085	178952085	A	G	SNP	PIK3CA	NM_006218.2	human	genbank	58_37c	+1	reviewed	missense	c.3140	p.H1047R	1.000	HMMSmart_PI3Kc,superfamily_Kinase_like	HMMSmart_C2,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,HMMPfam_PI3Ka,HMMSmart_PI3Ka,HMMPfam_PI3K_C2,HMMSmart_PI3K_C2,HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_C2_CaLB,superfamily_Kinase_like,superfamily_ARM-type_fold,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2,superfamily_SSF54236	-	no_errors
PREX2	80243	genome.wustl.edu	37	8	69028146	69028146	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	8	69028146	69028146	T	C	SNP	PREX2	NM_024870.2	human	genbank	58_37c	+1	validated	missense	c.3305	p.I1102T	1.000	NULL	"HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_DBL homology domain (DH-domain),HMMPfam_DEP,HMMSmart_SM00049,PatternScan_DH_1,HMMSmart_SM00228,superfamily_PDZ domain-like,HMMPfam_PH,HMMSmart_SM00233,superfamily_""Winged helix"" DNA-binding domain,superfamily_PH domain-like"	-	no_errors
PRG4	10216	genome.wustl.edu	37	1	186276240	186276240	+	Silent	SNP	T	T	C	novel	unknown	TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	1	186276240	186276240	T	C	SNP	PRG4	NM_005807.3	human	genbank	58_37c	+1	reviewed	silent	c.1389	p.T463	0.000	NULL	superfamily_Hemopexin-like domain,HMMPfam_Somatomedin_B,HMMSmart_SM00201,PatternScan_SMB_1,PatternScan_HEMOPEXIN,HMMPfam_Hemopexin,HMMSmart_SM00120,superfamily_Somatomedin B domain	-	no_errors
PRR3	80742	genome.wustl.edu	37	6	30529872	30529872	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	6	30529872	30529872	C	T	SNP	PRR3	NM_025263.3	human	genbank	58_37c	+1	validated	missense	c.431	p.P144L	0.950	NULL	HMMPfam_zf-CCCH,HMMSmart_SM00356	-	no_errors
RYR1	6261	genome.wustl.edu	37	19	39025994	39025994	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	19	39025994	39025994	C	T	SNP	RYR1	NM_000540.2	human	genbank	58_37c	+1	reviewed	silent	c.11478	p.G3826	0.999	NULL	HMMPfam_RYDR_ITPR,HMMPfam_RyR,HMMPfam_MIR,superfamily_MIR domain (Pfam 02815),HMMPfam_SPRY,HMMPfam_Ion_trans,HMMPfam_RR_TM4-6,HMMPfam_RIH_assoc,HMMPfam_Ins145_P3_rec,HMMSmart_SM00472,HMMSmart_SM00449,superfamily_EF-hand	-	no_errors
SAPS1	22870	genome.wustl.edu	37	19	55758557	55758557	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	19	55758557	55758557	G	T	SNP	SAPS1	ENST00000443936	human	ensembl	58_37c	-1	known	nonsense	c.101	p.S34*	0.000	NULL	HMMPfam_SAPS	-	no_errors
SCCPDH	51097	genome.wustl.edu	37	1	246930542	246930542	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	1	246930542	246930542	G	T	SNP	SCCPDH	NM_016002.2	human	genbank	58_37c	+1	validated	missense	c.1230	p.L410F	1.000	HMMPfam_Saccharop_dh	HMMPfam_Saccharop_dh,superfamily_NAD(P)-bd	-	no_errors
SIAE	54414	genome.wustl.edu	37	11	124518025	124518025	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	11	124518025	124518025	G	C	SNP	SIAE	NM_170601.3	human	genbank	58_37c	-1	validated	missense	c.769	p.L257V	1.000	HMMPfam_DUF303	HMMPfam_DUF303	-	no_errors
SLC13A1	6561	genome.wustl.edu	37	7	122757567	122757567	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	7	122757567	122757567	A	T	SNP	SLC13A1	NM_022444.3	human	genbank	58_37c	-1	validated	missense	c.1608	p.N536K	1.000	HMMPfam_Na_sulph_symp,PatternScan_NA_SULFATE	HMMPfam_Na_sulph_symp,PatternScan_NA_SULFATE	-	no_errors
SLC38A4	55089	genome.wustl.edu	37	12	47173756	47173756	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	12	47173756	47173756	A	G	SNP	SLC38A4	NM_001143824.1	human	genbank	58_37c	-1	validated	missense	c.551	p.F184S	1.000	HMMPfam_Aa_trans	HMMPfam_Aa_trans,PatternScan_RIBOSOMAL_L30	-	no_errors
SNORD3A	0	genome.wustl.edu	37	17	19091383	19091383	+	RNA	SNP	G	G	A	novel	unknown	TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	17	19091383	19091383	G	A	SNP	SNORD3A	NR_006880.1	human	genbank	58_37c	+1	provisional	rna	NULL	NULL	0.986	-	-	-	no_errors
SNORD3B-2	0	genome.wustl.edu	37	17	18967436	18967436	+	RNA	SNP	G	G	A	novel	unknown	TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	17	18967436	18967436	G	A	SNP	SNORD3B-2	NR_003924.1	human	genbank	58_37c	-1	provisional	rna	NULL	NULL	0.210	-	-	-	no_errors
STAB2	55576	genome.wustl.edu	37	12	104106175	104106175	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	12	104106175	104106175	A	G	SNP	STAB2	NM_017564.9	human	genbank	58_37c	+1	reviewed	silent	c.4365	p.S1455	0.001	HMMSmart_EGF	HMMPfam_Xlink,HMMSmart_LINK,PatternScan_LINK_1,HMMPfam_Fasciclin,HMMSmart_FAS1,superfamily_BIgH3_FAS1,HMMPfam_Laminin_EGF,PatternScan_EGF_LAM_1,HMMPfam_EGF,HMMSmart_EGF,HMMPfam_EGF_alliinase,superfamily_Grow_fac_recept,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF_2,superfamily_C-type_lectin_fold,superfamily_SSF57196	-	no_errors
STARD13	90627	genome.wustl.edu	37	13	33859766	33859766	+	Nonsense_Mutation	SNP	G	A	A	novel	unknown	TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	13	33859766	33859766	G	A	SNP	STARD13	NM_178006.3	human	genbank	58_37c	-1	validated	nonsense	c.10	p.Q4*	0.995	NULL	HMMPfam_RhoGAP,HMMSmart_SM00324,HMMPfam_START,HMMSmart_SM00234,superfamily_GTPase activation domain GAP,HMMPfam_SAM_2,superfamily_Bet v1-like	-	no_errors
STK3	6788	genome.wustl.edu	37	8	99591915	99591915	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	8	99591915	99591915	A	G	SNP	STK3	NM_006281.2	human	genbank	58_37c	-1	validated	silent	c.925	p.L309	0.982	NULL	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
TBX5	6910	genome.wustl.edu	37	12	114793477	114793477	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	12	114793477	114793477	G	C	SNP	TBX5	NM_000192.3	human	genbank	58_37c	-1	reviewed	missense	c.1417	p.Q473E	1.000	NULL	HMMPfam_T-box,HMMSmart_SM00425,superfamily_p53-like transcription factors,PatternScan_TBOX_2,PatternScan_TBOX_1	-	no_errors
TFIP11	24144	genome.wustl.edu	37	22	26890837	26890837	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	22	26890837	26890837	C	T	SNP	TFIP11	NM_001008697.1	human	genbank	58_37c	-1	validated	missense	c.1918	p.D640N	1.000	NULL	HMMPfam_G-patch,HMMSmart_SM00443,HMMPfam_TFP11	-	no_errors
THBS3	7059	genome.wustl.edu	37	1	155171777	155171777	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	1	155171777	155171777	C	G	SNP	THBS3	NM_007112.3	human	genbank	58_37c	-1	reviewed	missense	c.1147	p.D383H	1.000	HMMSmart_SM00179,HMMSmart_SM00181,HMMPfam_EGF_CA,PatternScan_EGF_CA,superfamily_EGF/Laminin	HMMSmart_SM00179,HMMSmart_SM00210,HMMPfam_TSP_3,HMMSmart_SM00181,HMMPfam_TSP_C,superfamily_Concanavalin A-like lectins/glucanases,PatternScan_EGF_2,HMMPfam_EGF_CA,PatternScan_EGF_CA,superfamily_TSP type-3 repeat,superfamily_EGF/Laminin	-	no_errors
THRAP3	9967	genome.wustl.edu	37	1	36766611	36766611	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	1	36766611	36766611	G	A	SNP	THRAP3	NM_005119.3	human	genbank	58_37c	+1	validated	missense	c.2428	p.D810N	1.000	NULL	NULL	-	no_errors
TP53	7157	genome.wustl.edu	37	17	7578409	7578437	+	Frame_Shift_Del	DEL	CTCACAACCTCCGTCATGTGCTGTGACTG	CTCACAACCTCCGTCATGTGCTGTGACTG	-	novel	unknown	TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	CTCACAACCTCCGTCATGTGCTGTGACTG	CTCACAACCTCCGTCATGTGCTGTGACTG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	17	7578409	7578437	CTCACAACCTCCGTCATGTGCTGTGACTG	-	DEL	TP53	NM_000546.4	human	genbank	58_37c	-1	reviewed	frame_shift_del	c.521_493	p.Q165fs	0.988:0.986:0.977:0.995:0.996:0.010:0.998:1.000:1.000:1.000:1.000:0.001:0.998:1.000:1.000:1.000:0.998:0.996:0.995:0.992:0.986:1.000:0.998:0.007:0.971:0.976:0.988:1.000:1.000	superfamily_p53-like transcription factors,HMMPfam_P53	PatternScan_P53,superfamily_p53-like transcription factors,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain,HMMPfam_P53,HMMPfam_P53_TAD	-	no_errors
TRIM24	8805	genome.wustl.edu	37	7	138203954	138203954	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	7	138203954	138203954	C	T	SNP	TRIM24	NM_015905.2	human	genbank	58_37c	+1	reviewed	nonsense	c.652	p.Q218*	1.000	HMMPfam_zf-B_box,HMMSmart_SM00336	HMMPfam_zf-B_box,HMMSmart_SM00336,HMMPfam_Bromodomain,HMMSmart_SM00297,superfamily_Bromodomain,HMMSmart_SM00184,HMMSmart_SM00249,HMMSmart_SM00502,superfamily_FYVE/PHD zinc finger,PatternScan_ZF_RING_1,PatternScan_BROMODOMAIN_1,HMMPfam_zf-C3HC4,PatternScan_ZF_PHD_1,HMMPfam_PHD,superfamily_RING/U-box	-	no_errors
TUBGCP4	27229	genome.wustl.edu	37	15	43687823	43687823	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	15	43687823	43687823	C	A	SNP	TUBGCP4	NM_014444.2	human	genbank	58_37c	+1	provisional	missense	c.1108	p.Q370K	1.000	HMMPfam_Spc97_Spc98	HMMPfam_Spc97_Spc98	-	no_errors
WFDC2	10406	genome.wustl.edu	37	20	44108611	44108611	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	20	44108611	44108611	A	G	SNP	WFDC2	NM_006103.3	human	genbank	58_37c	+1	reviewed	missense	c.253	p.I85V	0.000	HMMPfam_WAP,HMMSmart_SM00217,superfamily_Elafin-like	HMMPfam_WAP,HMMSmart_SM00217,superfamily_Elafin-like,PatternScan_4_DISULFIDE_CORE	-	no_errors
WSCD2	9671	genome.wustl.edu	37	12	108634315	108634315	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	12	108634315	108634315	G	A	SNP	WSCD2	NM_014653.2	human	genbank	58_37c	+1	validated	missense	c.1339	p.G447S	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_WSC,HMMSmart_SM00321,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
ZHX1	11244	genome.wustl.edu	37	8	124266785	124266785	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	8	124266785	124266785	G	A	SNP	ZHX1	NM_001017926.1	human	genbank	58_37c	-1	reviewed	missense	c.1402	p.R468W	1.000	HMMPfam_Homeobox,HMMSmart_HOX,superfamily_Homeodomain_like	HMMPfam_Homeobox,HMMSmart_HOX,PatternScan_ZINC_FINGER_C2H2_1,superfamily_Homeodomain_like,HMMSmart_ZnF_C2H2,PatternScan_HOMEOBOX_1	-	no_errors
ZNF281	23528	genome.wustl.edu	37	1	200376828	200376828	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	1	200376828	200376828	G	C	SNP	ZNF281	NM_012482.3	human	genbank	58_37c	-1	provisional	missense	c.2006	p.S669C	1.000	NULL	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
ZNF431	170959	genome.wustl.edu	37	19	21366706	21366706	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	19	21366706	21366706	C	T	SNP	ZNF431	NM_133473.2	human	genbank	58_37c	+1	validated	missense	c.1600	p.H534Y	1.000	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZNF592	9640	genome.wustl.edu	37	15	85327107	85327107	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	15	85327107	85327107	C	T	SNP	ZNF592	NM_014630.2	human	genbank	58_37c	+1	validated	missense	c.1201	p.P401S	0.902	NULL	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2	-	no_errors
ZSWIM5	57643	genome.wustl.edu	37	1	45516765	45516765	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A07B-01A-11W-A019-09	TCGA-A8-A07B-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	734421b9-ed55-45b0-9ad5-51bc754ebe90	0a007a6c-2f85-4061-9949-841299150cfc	1	45516765	45516765	C	T	SNP	ZSWIM5	NM_020883.1	human	genbank	58_37c	-1	validated	silent	c.1413	p.Q471	1.000	NULL	HMMPfam_SWIM	-	no_errors
