Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ACVR1B	91	genome.wustl.edu	37	12	52387803	52387803	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A08T-01A-21W-A019-09	TCGA-A8-A08T-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	af5f43d9-5ff3-4fd8-9c1c-30a88d2bab8e	84831f09-08af-4e3c-93a5-49b058ab40d5	12	52387803	52387803	G	A	SNP	ACVR1B	NM_004302.3	human	genbank	58_37c	+1	reviewed	missense	c.1427	p.C476Y	1.000	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase	HMMPfam_Activin_recp,HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_TGF_beta_GS,HMMSmart_SM00467,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,superfamily_Snake toxin-like	-	no_errors
AHNAK2	113146	genome.wustl.edu	37	14	105420635	105420635	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A08T-01A-21W-A019-09	TCGA-A8-A08T-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	af5f43d9-5ff3-4fd8-9c1c-30a88d2bab8e	84831f09-08af-4e3c-93a5-49b058ab40d5	14	105420635	105420635	G	A	SNP	AHNAK2	NM_138420.2	human	genbank	58_37c	-1	validated	nonsense	c.1153	p.R385*	0.000	NULL	HMMPfam_Involucrin,HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like	-	no_errors
ANK1	286	genome.wustl.edu	37	8	41552742	41552742	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A08T-01A-21W-A019-09	TCGA-A8-A08T-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	af5f43d9-5ff3-4fd8-9c1c-30a88d2bab8e	84831f09-08af-4e3c-93a5-49b058ab40d5	8	41552742	41552742	C	T	SNP	ANK1	NM_001142446.1	human	genbank	58_37c	-1	reviewed	missense	c.3191	p.R1064H	1.000	NULL	HMMPfam_Death,HMMSmart_DEATH,HMMPfam_ZU5,HMMSmart_ZU5,HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK,superfamily_DEATH_like	-	no_errors
ANKRD26	22852	genome.wustl.edu	37	10	27326874	27326874	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A08T-01A-21W-A019-09	TCGA-A8-A08T-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	af5f43d9-5ff3-4fd8-9c1c-30a88d2bab8e	84831f09-08af-4e3c-93a5-49b058ab40d5	10	27326874	27326874	C	T	SNP	ANKRD26	NM_014915.2	human	genbank	58_37c	-1	validated	missense	c.2485	p.V829M	0.000	NULL	HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK	-	no_errors
APOL1	8542	genome.wustl.edu	37	22	36661744	36661744	+	Nonsense_Mutation	SNP	C	C	T	rs186196175	by1000genomes	TCGA-A8-A08T-01A-21W-A019-09	TCGA-A8-A08T-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	af5f43d9-5ff3-4fd8-9c1c-30a88d2bab8e	84831f09-08af-4e3c-93a5-49b058ab40d5	22	36661744	36661744	C	T	SNP	APOL1	NM_145343.2	human	genbank	58_37c	+1	reviewed	nonsense	c.910	p.R304*	0.000	HMMPfam_ApoL	HMMPfam_ApoL	-	no_errors
BRWD3	254065	genome.wustl.edu	37	X	79932420	79932420	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A8-A08T-01A-21W-A019-09	TCGA-A8-A08T-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	af5f43d9-5ff3-4fd8-9c1c-30a88d2bab8e	84831f09-08af-4e3c-93a5-49b058ab40d5	X	79932420	79932420	T	A	SNP	BRWD3	NM_153252.4	human	genbank	58_37c	-1	reviewed	missense	c.5097	p.R1699S	1.000	NULL	HMMPfam_Bromodomain,HMMSmart_SM00297,superfamily_Bromodomain,HMMSmart_SM00320,superfamily_YVTN repeat-like/Quinoprotein amine dehydrogenase,PatternScan_WD_REPEATS_1,HMMPfam_WD40	-	no_errors
C1orf222	339457	genome.wustl.edu	37	1	1886756	1886757	+	Frame_Shift_Ins	INS	-	-	CTGGTGCGCGT	novel	unknown	TCGA-A8-A08T-01A-21W-A019-09	TCGA-A8-A08T-10A-01W-A021-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	af5f43d9-5ff3-4fd8-9c1c-30a88d2bab8e	84831f09-08af-4e3c-93a5-49b058ab40d5	1	1886756	1886757	-	CTGGTGCGCGT	INS	C1orf222	ENST00000434971	human	ensembl	58_37c	-1	known	frame_shift_ins	c.2383_2382	p.R794fs	0.000:0.001	NULL	NULL	-	no_errors
C1orf55	163859	genome.wustl.edu	37	1	226173176	226173176	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A08T-01A-21W-A019-09	TCGA-A8-A08T-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	af5f43d9-5ff3-4fd8-9c1c-30a88d2bab8e	84831f09-08af-4e3c-93a5-49b058ab40d5	1	226173176	226173176	C	G	SNP	C1orf55	NM_152608.3	human	genbank	58_37c	-1	validated	missense	c.1183	p.E395Q	0.977	NULL	NULL	-	no_errors
C3orf71	646450	genome.wustl.edu	37	3	48956169	48956169	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A08T-01A-21W-A019-09	TCGA-A8-A08T-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	af5f43d9-5ff3-4fd8-9c1c-30a88d2bab8e	84831f09-08af-4e3c-93a5-49b058ab40d5	3	48956169	48956169	C	G	SNP	C3orf71	NM_001123040.1	human	genbank	58_37c	-1	predicted	missense	c.414	p.L138F	0.000	NULL	NULL	-	no_errors
CACNA1D	776	genome.wustl.edu	37	3	53842707	53842707	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A08T-01A-21W-A019-09	TCGA-A8-A08T-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	af5f43d9-5ff3-4fd8-9c1c-30a88d2bab8e	84831f09-08af-4e3c-93a5-49b058ab40d5	3	53842707	53842707	C	T	SNP	CACNA1D	NM_000720.2	human	genbank	58_37c	+1	validated	silent	c.5841	p.C1947	1.000	NULL	HMMPfam_Ion_trans,HMMPfam_Ca_chan_IQ,superfamily_SSF81324	-	no_errors
CHPF	79586	genome.wustl.edu	37	2	220404537	220404537	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A08T-01A-21W-A019-09	TCGA-A8-A08T-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	af5f43d9-5ff3-4fd8-9c1c-30a88d2bab8e	84831f09-08af-4e3c-93a5-49b058ab40d5	2	220404537	220404537	G	A	SNP	CHPF	NM_024536.5	human	genbank	58_37c	-1	validated	silent	c.1896	p.A632	1.000	HMMPfam_CHGN	HMMPfam_CHGN	-	no_errors
CROCCL1	84809	genome.wustl.edu	37	1	16946434	16946434	+	RNA	SNP	C	C	T	rs367060	by2Hit2Allele	TCGA-A8-A08T-01A-21W-A019-09	TCGA-A8-A08T-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	af5f43d9-5ff3-4fd8-9c1c-30a88d2bab8e	84831f09-08af-4e3c-93a5-49b058ab40d5	1	16946434	16946434	C	T	SNP	CROCCL1	NR_026752.1	human	genbank	58_37c	-1	validated	rna	NULL	NULL	0.987	-	-	-	pseudogene
CTNND2	1501	genome.wustl.edu	37	5	11346597	11346597	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A08T-01A-21W-A019-09	TCGA-A8-A08T-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	af5f43d9-5ff3-4fd8-9c1c-30a88d2bab8e	84831f09-08af-4e3c-93a5-49b058ab40d5	5	11346597	11346597	C	A	SNP	CTNND2	NM_001332.2	human	genbank	58_37c	-1	validated	missense	c.1515	p.Q505H	1.000	NULL	HMMPfam_Arm,HMMSmart_SM00185,superfamily_ARM repeat	-	no_errors
DACH2	117154	genome.wustl.edu	37	X	86071092	86071092	+	Silent	SNP	T	T	C	novel	unknown	TCGA-A8-A08T-01A-21W-A019-09	TCGA-A8-A08T-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	af5f43d9-5ff3-4fd8-9c1c-30a88d2bab8e	84831f09-08af-4e3c-93a5-49b058ab40d5	X	86071092	86071092	T	C	SNP	DACH2	NM_053281.3	human	genbank	58_37c	+1	reviewed	silent	c.1740	p.A580	1.000	NULL	HMMPfam_Ski_Sno,superfamily_Putative DNA-binding domain	-	no_errors
ENSG00000246436	0	genome.wustl.edu	37	X	135863261	135863261	+	RNA	SNP	G	G	T	novel	unknown	TCGA-A8-A08T-01A-21W-A019-09	TCGA-A8-A08T-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	af5f43d9-5ff3-4fd8-9c1c-30a88d2bab8e	84831f09-08af-4e3c-93a5-49b058ab40d5	X	135863261	135863261	G	T	SNP	ARHGEF6	NM_004840.2	human	genbank	58_37c	-1	reviewed	5_prime_untranslated_region	c.-220	NULL	0.002	-	-	-	no_errors
FAM75C1	441452	genome.wustl.edu	37	9	90538208	90538208	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A08T-01A-21W-A019-09	TCGA-A8-A08T-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	af5f43d9-5ff3-4fd8-9c1c-30a88d2bab8e	84831f09-08af-4e3c-93a5-49b058ab40d5	9	90538208	90538208	G	A	SNP	FAM75C1	NM_001145124.1	human	genbank	58_37c	+1	validated	missense	c.3386	p.S1129N	0.003	NULL	NULL	-	no_errors
FAT1	2195	genome.wustl.edu	37	4	187525601	187525601	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A08T-01A-21W-A019-09	TCGA-A8-A08T-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	af5f43d9-5ff3-4fd8-9c1c-30a88d2bab8e	84831f09-08af-4e3c-93a5-49b058ab40d5	4	187525601	187525601	G	A	SNP	FAT1	NM_005245.3	human	genbank	58_37c	-1	reviewed	missense	c.10478	p.P3493L	0.998	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Concanavalin A-like lectins/glucanases,superfamily_Cadherin-like	PatternScan_ASX_HYDROXYL,HMMSmart_SM00282,HMMSmart_SM00179,HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_EGF,HMMSmart_SM00181,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_2,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_Cadherin-like,PatternScan_EGF_CA,superfamily_EGF/Laminin	-	no_errors
G6PD	2539	genome.wustl.edu	37	X	153761953	153761953	+	Silent	SNP	A	A	T	novel	unknown	TCGA-A8-A08T-01A-21W-A019-09	TCGA-A8-A08T-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	af5f43d9-5ff3-4fd8-9c1c-30a88d2bab8e	84831f09-08af-4e3c-93a5-49b058ab40d5	X	153761953	153761953	A	T	SNP	G6PD	ENST00000369620	human	ensembl	58_37c	-1	known	silent	c.840	p.G280	0.000	HMMPfam_G6PD_C	HMMPfam_G6PD_N,HMMPfam_G6PD_C,superfamily_NAD(P)-bd,PatternScan_G6P_DEHYDROGENASE,superfamily_SSF55347	-	no_errors
HADHB	3032	genome.wustl.edu	37	2	26505908	26505908	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A8-A08T-01A-21W-A019-09	TCGA-A8-A08T-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	af5f43d9-5ff3-4fd8-9c1c-30a88d2bab8e	84831f09-08af-4e3c-93a5-49b058ab40d5	2	26505908	26505908	A	T	SNP	HADHB	NM_000183.2	human	genbank	58_37c	+1	reviewed	missense	c.1050	p.Q350H	0.999	HMMPfam_Thiolase_C,superfamily_Thiolase-like	HMMPfam_Thiolase_N,HMMPfam_Thiolase_C,PatternScan_THIOLASE_1,PatternScan_THIOLASE_3,PatternScan_THIOLASE_2,superfamily_Thiolase-like	-	no_errors
HAUS8	93323	genome.wustl.edu	37	19	17169452	17169452	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A08T-01A-21W-A019-09	TCGA-A8-A08T-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	af5f43d9-5ff3-4fd8-9c1c-30a88d2bab8e	84831f09-08af-4e3c-93a5-49b058ab40d5	19	17169452	17169452	C	G	SNP	HAUS8	NM_033417.1	human	genbank	58_37c	-1	validated	missense	c.552	p.E184D	0.056	NULL	NULL	-	no_errors
HDAC6	10013	genome.wustl.edu	37	X	48672895	48672895	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A08T-01A-21W-A019-09	TCGA-A8-A08T-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	af5f43d9-5ff3-4fd8-9c1c-30a88d2bab8e	84831f09-08af-4e3c-93a5-49b058ab40d5	X	48672895	48672895	C	T	SNP	HDAC6	NM_006044.2	human	genbank	58_37c	+1	reviewed	silent	c.855	p.P285	1.000	HMMPfam_Hist_deacetyl,superfamily_SSF52768	HMMPfam_Hist_deacetyl,HMMPfam_zf-UBP,HMMSmart_ZnF_UBP,superfamily_SSF52768	-	no_errors
JAK1	3716	genome.wustl.edu	37	1	65301180	65301180	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A8-A08T-01A-21W-A019-09	TCGA-A8-A08T-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	af5f43d9-5ff3-4fd8-9c1c-30a88d2bab8e	84831f09-08af-4e3c-93a5-49b058ab40d5	1	65301180	65301180	T	G	SNP	JAK1	NM_002227.2	human	genbank	58_37c	-1	reviewed	missense	c.3268	p.K1090Q	1.000	HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,superfamily_Kinase_like	HMMSmart_SH2,HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,PatternScan_PROTEIN_KINASE_TYR,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,PatternScan_FERM_1,PatternScan_FERM_2,HMMSmart_B41,superfamily_SSF55550	-	no_errors
KCNT2	343450	genome.wustl.edu	37	1	196311258	196311258	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A08T-01A-21W-A019-09	TCGA-A8-A08T-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	af5f43d9-5ff3-4fd8-9c1c-30a88d2bab8e	84831f09-08af-4e3c-93a5-49b058ab40d5	1	196311258	196311258	C	T	SNP	KCNT2	NM_198503.2	human	genbank	58_37c	-1	validated	missense	c.1504	p.E502K	1.000	HMMPfam_BK_channel_a,superfamily_NAD(P)-binding Rossmann-fold domains	HMMPfam_BK_channel_a,HMMPfam_Ion_trans_2,superfamily_NAD(P)-binding Rossmann-fold domains,superfamily_Voltage-gated potassium channels	-	no_errors
LILRA3	11026	genome.wustl.edu	37	19	54802507	54802507	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A08T-01A-21W-A019-09	TCGA-A8-A08T-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	af5f43d9-5ff3-4fd8-9c1c-30a88d2bab8e	84831f09-08af-4e3c-93a5-49b058ab40d5	19	54802507	54802507	C	T	SNP	LILRA3	NM_006865.3	human	genbank	58_37c	-1	validated	missense	c.934	p.D312N	0.038	HMMSmart_IG,superfamily_SSF48726	HMMSmart_IG,HMMPfam_ig,superfamily_SSF48726	-	no_errors
LOC653111	653111	genome.wustl.edu	37	11	89774388	89774388	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A08T-01A-21W-A019-09	TCGA-A8-A08T-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	af5f43d9-5ff3-4fd8-9c1c-30a88d2bab8e	84831f09-08af-4e3c-93a5-49b058ab40d5	11	89774388	89774388	G	T	SNP	LOC653111	XM_926073.2	human	genbank	58_37c	+1	model	missense	c.1029	p.W343C	0.984	HMMPfam_SPRY,HMMSmart_SM00449	HMMPfam_zf-B_box,HMMSmart_SM00336,HMMSmart_SM00184,HMMPfam_SPRY,HMMSmart_SM00449,HMMPfam_zf-C3HC4,superfamily_RING/U-box	-	no_errors
LUZP2	338645	genome.wustl.edu	37	11	25098915	25098915	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A08T-01A-21W-A019-09	TCGA-A8-A08T-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	af5f43d9-5ff3-4fd8-9c1c-30a88d2bab8e	84831f09-08af-4e3c-93a5-49b058ab40d5	11	25098915	25098915	C	T	SNP	LUZP2	NM_001009909.2	human	genbank	58_37c	+1	validated	missense	c.899	p.P300L	0.000	NULL	NULL	-	no_errors
NCOA3	8202	genome.wustl.edu	37	20	46264773	46264773	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A8-A08T-01A-21W-A019-09	TCGA-A8-A08T-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	af5f43d9-5ff3-4fd8-9c1c-30a88d2bab8e	84831f09-08af-4e3c-93a5-49b058ab40d5	20	46264773	46264773	T	G	SNP	NCOA3	NM_181659.2	human	genbank	58_37c	+1	reviewed	missense	c.1643	p.L548W	0.999	NULL	HMMSmart_SM00091,HMMPfam_HLH,HMMSmart_SM00353,superfamily_Nuclear receptor coactivator interlocking domain,HMMPfam_DUF1518,superfamily_HLH helix-loop-helix DNA-binding domain,HMMPfam_PAS,HMMPfam_Nuc_rec_co-act,HMMPfam_SRC-1,superfamily_PYP-like sensor domain (PAS domain)	-	no_errors
NHS	4810	genome.wustl.edu	37	X	17745318	17745318	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A08T-01A-21W-A019-09	TCGA-A8-A08T-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	af5f43d9-5ff3-4fd8-9c1c-30a88d2bab8e	84831f09-08af-4e3c-93a5-49b058ab40d5	X	17745318	17745318	C	T	SNP	NHS	NM_198270.2	human	genbank	58_37c	+1	reviewed	missense	c.3029	p.T1010M	1.000	NULL	NULL	-	no_errors
OPHN1	4983	genome.wustl.edu	37	X	67339171	67339171	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A08T-01A-21W-A019-09	TCGA-A8-A08T-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	af5f43d9-5ff3-4fd8-9c1c-30a88d2bab8e	84831f09-08af-4e3c-93a5-49b058ab40d5	X	67339171	67339171	G	C	SNP	OPHN1	NM_002547.2	human	genbank	58_37c	-1	reviewed	missense	c.1280	p.P427R	1.000	HMMPfam_RhoGAP,HMMSmart_RhoGAP,superfamily_Rho_GAP	HMMPfam_RhoGAP,HMMSmart_RhoGAP,HMMPfam_PH,HMMSmart_PH,superfamily_Rho_GAP,superfamily_SSF50729	-	no_errors
PCDH19	57526	genome.wustl.edu	37	X	99657715	99657715	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A08T-01A-21W-A019-09	TCGA-A8-A08T-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	af5f43d9-5ff3-4fd8-9c1c-30a88d2bab8e	84831f09-08af-4e3c-93a5-49b058ab40d5	X	99657715	99657715	G	A	SNP	PCDH19	NM_001105243.1	human	genbank	58_37c	-1	reviewed	missense	c.2282	p.T761I	1.000	NULL	HMMPfam_Cadherin,HMMSmart_CA,PatternScan_CADHERIN_1,HMMPfam_Cadherin_2,superfamily_Cadherin	-	no_errors
PCF11	51585	genome.wustl.edu	37	11	82877733	82877733	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A8-A08T-01A-21W-A019-09	TCGA-A8-A08T-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	af5f43d9-5ff3-4fd8-9c1c-30a88d2bab8e	84831f09-08af-4e3c-93a5-49b058ab40d5	11	82877733	82877733	A	G	SNP	PCF11	NM_015885.3	human	genbank	58_37c	+1	validated	silent	c.1794	p.K598	1.000	NULL	HMMSmart_SM00582,HMMPfam_DUF618,superfamily_ENTH/VHS domain	-	no_errors
PDZD8	118987	genome.wustl.edu	37	10	119043132	119043132	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A8-A08T-01A-21W-A019-09	TCGA-A8-A08T-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	af5f43d9-5ff3-4fd8-9c1c-30a88d2bab8e	84831f09-08af-4e3c-93a5-49b058ab40d5	10	119043132	119043132	A	G	SNP	PDZD8	NM_173791.3	human	genbank	58_37c	-1	provisional	missense	c.3112	p.F1038L	1.000	NULL	HMMPfam_PDZ,HMMSmart_PDZ,superfamily_PDZ,HMMPfam_C1_1,HMMSmart_C1,PatternScan_ZF_DAG_PE_1,superfamily_SSF57889	-	no_errors
PIK3CA	5290	genome.wustl.edu	37	3	178936091	178936091	+	Missense_Mutation	SNP	G	G	A	rs104886003	byCluster	TCGA-A8-A08T-01A-21W-A019-09	TCGA-A8-A08T-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	af5f43d9-5ff3-4fd8-9c1c-30a88d2bab8e	84831f09-08af-4e3c-93a5-49b058ab40d5	3	178936091	178936091	G	A	SNP	PIK3CA	NM_006218.2	human	genbank	58_37c	+1	reviewed	missense	c.1633	p.E545K	1.000	HMMPfam_PI3Ka,HMMSmart_PI3Ka,superfamily_ARM-type_fold	HMMSmart_C2,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,HMMPfam_PI3Ka,HMMSmart_PI3Ka,HMMPfam_PI3K_C2,HMMSmart_PI3K_C2,HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_C2_CaLB,superfamily_Kinase_like,superfamily_ARM-type_fold,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2,superfamily_SSF54236	-	no_errors
PLCXD1	55344	genome.wustl.edu	37	X	209780	209780	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A08T-01A-21W-A019-09	TCGA-A8-A08T-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	af5f43d9-5ff3-4fd8-9c1c-30a88d2bab8e	84831f09-08af-4e3c-93a5-49b058ab40d5	X	209780	209780	C	T	SNP	PLCXD1	NM_018390.3	human	genbank	58_37c	+1	reviewed	missense	c.628	p.R210W	0.101	superfamily_PLC-like_Pdiesterase_TIM-brl	superfamily_PLC-like_Pdiesterase_TIM-brl	-	no_errors
PMS2	5395	genome.wustl.edu	37	7	6031635	6031635	+	Silent	SNP	T	T	C	novel	unknown	TCGA-A8-A08T-01A-21W-A019-09	TCGA-A8-A08T-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	af5f43d9-5ff3-4fd8-9c1c-30a88d2bab8e	84831f09-08af-4e3c-93a5-49b058ab40d5	7	6031635	6031635	T	C	SNP	PMS2	NM_000535.5	human	genbank	58_37c	-1	reviewed	silent	c.957	p.P319	0.966	HMMPfam_DNA_mis_repair,superfamily_Ribosomal protein S5 domain 2-like	HMMPfam_HATPase_c,superfamily_ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase,HMMPfam_DNA_mis_repair,PatternScan_DNA_MISMATCH_REPAIR_1,HMMPfam_MutL_C,superfamily_Ribosomal protein S5 domain 2-like	-	no_errors
POU4F2	5458	genome.wustl.edu	37	4	147561836	147561836	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A08T-01A-21W-A019-09	TCGA-A8-A08T-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	af5f43d9-5ff3-4fd8-9c1c-30a88d2bab8e	84831f09-08af-4e3c-93a5-49b058ab40d5	4	147561836	147561836	G	A	SNP	POU4F2	NM_004575.2	human	genbank	58_37c	+1	validated	missense	c.1106	p.R369Q	1.000	HMMPfam_Homeobox,HMMSmart_SM00389,superfamily_Homeodomain-like	HMMPfam_Pou,HMMSmart_SM00352,PatternScan_POU_1,PatternScan_POU_2,HMMPfam_Homeobox,HMMSmart_SM00389,superfamily_Homeodomain-like,superfamily_lambda repressor-like DNA-binding domains,PatternScan_HOMEOBOX_1	-	no_errors
PPARGC1B	133522	genome.wustl.edu	37	5	149212267	149212267	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A08T-01A-21W-A019-09	TCGA-A8-A08T-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	af5f43d9-5ff3-4fd8-9c1c-30a88d2bab8e	84831f09-08af-4e3c-93a5-49b058ab40d5	5	149212267	149212267	C	T	SNP	PPARGC1B	NM_133263.3	human	genbank	58_37c	+1	reviewed	nonsense	c.631	p.R211*	1.000	NULL	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD	-	no_errors
PRPF4	9128	genome.wustl.edu	37	9	116050502	116050502	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-A8-A08T-01A-21W-A019-09	TCGA-A8-A08T-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	af5f43d9-5ff3-4fd8-9c1c-30a88d2bab8e	84831f09-08af-4e3c-93a5-49b058ab40d5	9	116050502	116050502	G	-	DEL	PRPF4	NM_004697.3	human	genbank	58_37c	+1	provisional	frame_shift_del	c.983	p.V329fs	1.000	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40,PatternScan_PEROXIDASE_2	HMMSmart_SM00320,HMMSmart_SM00500,superfamily_WD40 repeat-like,HMMPfam_PRP4,PatternScan_WD_REPEATS_1,HMMPfam_WD40,PatternScan_PEROXIDASE_2	-	no_errors
PRUNE	58497	genome.wustl.edu	37	1	151001299	151001299	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A8-A08T-01A-21W-A019-09	TCGA-A8-A08T-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	af5f43d9-5ff3-4fd8-9c1c-30a88d2bab8e	84831f09-08af-4e3c-93a5-49b058ab40d5	1	151001299	151001299	A	G	SNP	PRUNE	NM_021222.1	human	genbank	58_37c	+1	provisional	missense	c.812	p.H271R	0.005	HMMPfam_DHHA2,superfamily_DHH phosphoesterases	HMMPfam_DHH,HMMPfam_DHHA2,PatternScan_GLYCOSYL_HYDROL_F5,superfamily_DHH phosphoesterases	-	no_errors
PSMA8	143471	genome.wustl.edu	37	18	23731889	23731889	+	Silent	SNP	G	G	T	rs138692405	byFrequency	TCGA-A8-A08T-01A-21W-A019-09	TCGA-A8-A08T-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	af5f43d9-5ff3-4fd8-9c1c-30a88d2bab8e	84831f09-08af-4e3c-93a5-49b058ab40d5	18	23731889	23731889	G	T	SNP	PSMA8	NM_144662.2	human	genbank	58_37c	+1	validated	silent	c.315	p.T105	0.913	HMMPfam_Proteasome,superfamily_N-terminal nucleophile aminohydrolases (Ntn hydrolases)	HMMPfam_Proteasome_A_N,PatternScan_PROTEASOME_A,HMMPfam_Proteasome,superfamily_N-terminal nucleophile aminohydrolases (Ntn hydrolases)	-	no_errors
RAB11FIP5	26056	genome.wustl.edu	37	2	73316121	73316121	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A08T-01A-21W-A019-09	TCGA-A8-A08T-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	af5f43d9-5ff3-4fd8-9c1c-30a88d2bab8e	84831f09-08af-4e3c-93a5-49b058ab40d5	2	73316121	73316121	G	A	SNP	RAB11FIP5	NM_015470.2	human	genbank	58_37c	-1	validated	silent	c.754	p.L252	0.967	NULL	HMMPfam_C2,HMMSmart_C2,superfamily_C2_CaLB,HMMPfam_RBD-FIP	-	no_errors
SHD	56961	genome.wustl.edu	37	19	4283129	4283129	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A08T-01A-21W-A019-09	TCGA-A8-A08T-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	af5f43d9-5ff3-4fd8-9c1c-30a88d2bab8e	84831f09-08af-4e3c-93a5-49b058ab40d5	19	4283129	4283129	C	T	SNP	SHD	NM_020209.3	human	genbank	58_37c	+1	validated	missense	c.482	p.S161F	0.001	NULL	HMMPfam_SH2,HMMSmart_SH2,superfamily_SSF55550	-	no_errors
SLC9A10	285335	genome.wustl.edu	37	3	111988846	111988846	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A8-A08T-01A-21W-A019-09	TCGA-A8-A08T-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	af5f43d9-5ff3-4fd8-9c1c-30a88d2bab8e	84831f09-08af-4e3c-93a5-49b058ab40d5	3	111988846	111988846	T	G	SNP	SLC9A10	NM_183061.1	human	genbank	58_37c	-1	validated	missense	c.692	p.Q231P	0.087	HMMPfam_Na_H_Exchanger	HMMPfam_cNMP_binding,HMMPfam_Ion_trans,HMMPfam_Na_H_Exchanger,superfamily_cAMP-binding domain-like,PatternScan_WD_REPEATS_1,superfamily_Voltage-gated potassium channels	-	no_errors
TCF20	6942	genome.wustl.edu	37	22	42609296	42609298	+	In_Frame_Del	DEL	GTT	GTT	-	novel	unknown	TCGA-A8-A08T-01A-21W-A019-09	TCGA-A8-A08T-10A-01W-A021-09	GTT	GTT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	af5f43d9-5ff3-4fd8-9c1c-30a88d2bab8e	84831f09-08af-4e3c-93a5-49b058ab40d5	22	42609296	42609298	GTT	-	DEL	TCF20	NM_005650.1	human	genbank	58_37c	-1	reviewed	in_frame_del	c.2016_2014	p.N672in_frame_del	0.563:0.551:0.499	NULL	HMMSmart_SM00249	-	no_errors
TOX4	9878	genome.wustl.edu	37	14	21961324	21961324	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A08T-01A-21W-A019-09	TCGA-A8-A08T-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	af5f43d9-5ff3-4fd8-9c1c-30a88d2bab8e	84831f09-08af-4e3c-93a5-49b058ab40d5	14	21961324	21961324	G	T	SNP	TOX4	NM_014828.2	human	genbank	58_37c	+1	validated	nonsense	c.1549	p.E517*	1.000	NULL	HMMPfam_HMG_box,HMMSmart_HMG,superfamily_HMG-box	-	no_errors
ZNF639	51193	genome.wustl.edu	37	3	179051631	179051631	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A08T-01A-21W-A019-09	TCGA-A8-A08T-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	af5f43d9-5ff3-4fd8-9c1c-30a88d2bab8e	84831f09-08af-4e3c-93a5-49b058ab40d5	3	179051631	179051631	G	T	SNP	ZNF639	NM_016331.1	human	genbank	58_37c	+1	provisional	missense	c.879	p.Q293H	1.000	PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
