Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ADAMTS1	9510	genome.wustl.edu	37	21	28210587	28210587	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A09X-01A-11W-A019-09	TCGA-A8-A09X-10A-01W-A021-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48e532ea-2af5-427a-a784-781e208cced6	a0a00bdd-dfc0-4707-9491-d509f218d623	21	28210587	28210587	G	T	SNP	ADAMTS1	NM_006988.3	human	genbank	58_37c	-1	reviewed	missense	c.2215	p.H739N	1.000	HMMPfam_ADAM_spacer1	HMMPfam_TSP_1,HMMSmart_TSP1,superfamily_TSP1,HMMPfam_Reprolysin,HMMPfam_Pep_M12B_propep,PatternScan_ZINC_PROTEASE,HMMSmart_ACR,HMMPfam_ADAM_spacer1,PatternScan_DISINTEGRIN_1,superfamily_SSF55486	-	no_errors
ATP10D	57205	genome.wustl.edu	37	4	47525064	47525064	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A8-A09X-01A-11W-A019-09	TCGA-A8-A09X-10A-01W-A021-09	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48e532ea-2af5-427a-a784-781e208cced6	a0a00bdd-dfc0-4707-9491-d509f218d623	4	47525064	47525064	A	T	SNP	ATP10D	NM_020453.3	human	genbank	58_37c	+1	validated	missense	c.521	p.D174V	1.000	HMMPfam_E1-E2_ATPase,superfamily_Calcium ATPase transduction domain A	HMMPfam_E1-E2_ATPase,HMMPfam_Hydrolase_3,PatternScan_ATPASE_E1_E2,superfamily_HAD-like,superfamily_Calcium ATPase transduction domain A,superfamily_Metal cation-transporting ATPase ATP-binding domain N	-	no_errors
B4GALT4	8702	genome.wustl.edu	37	3	118942945	118942945	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A09X-01A-11W-A019-09	TCGA-A8-A09X-10A-01W-A021-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48e532ea-2af5-427a-a784-781e208cced6	a0a00bdd-dfc0-4707-9491-d509f218d623	3	118942945	118942945	G	A	SNP	B4GALT4	NM_003778.3	human	genbank	58_37c	-1	reviewed	missense	c.634	p.P212S	1.000	HMMPfam_Galactosyl_T_2,superfamily_Nucleotide-diphospho-sugar transferases	HMMPfam_Galactosyl_T_2,superfamily_Nucleotide-diphospho-sugar transferases	-	no_errors
C1orf114	57821	genome.wustl.edu	37	1	169391389	169391389	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A09X-01A-11W-A019-09	TCGA-A8-A09X-10A-01W-A021-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48e532ea-2af5-427a-a784-781e208cced6	a0a00bdd-dfc0-4707-9491-d509f218d623	1	169391389	169391389	G	A	SNP	C1orf114	NM_021179.1	human	genbank	58_37c	-1	predicted	missense	c.280	p.P94S	0.918	NULL	NULL	-	no_errors
C5orf20	140947	genome.wustl.edu	37	5	134782595	134782595	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A09X-01A-11W-A019-09	TCGA-A8-A09X-10A-01W-A021-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48e532ea-2af5-427a-a784-781e208cced6	a0a00bdd-dfc0-4707-9491-d509f218d623	5	134782595	134782595	G	T	SNP	C5orf20	NM_130848.2	human	genbank	58_37c	-1	reviewed	nonsense	c.204	p.Y68*	0.002	NULL	NULL	-	no_errors
CACNA1G	8913	genome.wustl.edu	37	17	48674212	48674212	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A09X-01A-11W-A019-09	TCGA-A8-A09X-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	48e532ea-2af5-427a-a784-781e208cced6	a0a00bdd-dfc0-4707-9491-d509f218d623	17	48674212	48674212	G	A	SNP	CACNA1G	NM_018896.3	human	genbank	58_37c	+1	validated	silent	c.3186	p.L1062	0.815	NULL	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels	-	no_errors
CDH1	999	genome.wustl.edu	37	16	68845625	68845625	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-A8-A09X-01A-11W-A019-09	TCGA-A8-A09X-10A-01W-A021-09	G	G	G	-	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48e532ea-2af5-427a-a784-781e208cced6	a0a00bdd-dfc0-4707-9491-d509f218d623	16	68845625	68845625	G	-	DEL	CDH1	NM_004360.3	human	genbank	58_37c	+1	reviewed	frame_shift_del	c.871	p.D291fs	0.997	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like	HMMPfam_Cadherin_C,HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin_pro,superfamily_Cadherin-like	-	no_errors
CIT	11113	genome.wustl.edu	37	12	120189920	120189920	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A09X-01A-11W-A019-09	TCGA-A8-A09X-10A-01W-A021-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48e532ea-2af5-427a-a784-781e208cced6	a0a00bdd-dfc0-4707-9491-d509f218d623	12	120189920	120189920	G	A	SNP	CIT	NM_007174.1	human	genbank	58_37c	-1	validated	missense	c.2713	p.R905C	1.000	NULL	HMMSmart_SM00133,HMMPfam_CNH,HMMSmart_SM00036,HMMSmart_SM00219,HMMPfam_PH,HMMSmart_SM00233,HMMPfam_C1_1,HMMSmart_SM00109,PatternScan_ZF_DAG_PE_1,HMMSmart_SM00220,PatternScan_CPSASE_2,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,HMMPfam_Pkinase_C,superfamily_PH domain-like,superfamily_Cysteine-rich domain	-	no_errors
DCAF8L1	139425	genome.wustl.edu	37	X	27997690	27997690	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A09X-01A-11W-A019-09	TCGA-A8-A09X-10A-01W-A021-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48e532ea-2af5-427a-a784-781e208cced6	a0a00bdd-dfc0-4707-9491-d509f218d623	X	27997690	27997690	C	T	SNP	DCAF8L1	NM_001017930.1	human	genbank	58_37c	-1	reviewed	missense	c.1762	p.E588K	0.782	NULL	HMMSmart_WD40,superfamily_WD40_like,PatternScan_WD_REPEATS_1,HMMPfam_WD40	-	no_errors
DLGAP2	9228	genome.wustl.edu	37	8	1624725	1624725	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A09X-01A-11W-A019-09	TCGA-A8-A09X-10A-01W-A021-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48e532ea-2af5-427a-a784-781e208cced6	a0a00bdd-dfc0-4707-9491-d509f218d623	8	1624725	1624725	G	A	SNP	DLGAP2	NM_004745.3	human	genbank	58_37c	+1	reviewed	silent	c.1989	p.T663	0.940	HMMPfam_GKAP	HMMPfam_GKAP	-	no_errors
DMD	1756	genome.wustl.edu	37	X	31462683	31462683	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A09X-01A-11W-A019-09	TCGA-A8-A09X-10A-01W-A021-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48e532ea-2af5-427a-a784-781e208cced6	a0a00bdd-dfc0-4707-9491-d509f218d623	X	31462683	31462683	C	T	SNP	DMD	NM_004006.2	human	genbank	58_37c	-1	reviewed	missense	c.8999	p.R3000H	0.987	HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_Spectrin repeat	HMMPfam_ZZ,HMMSmart_SM00291,PatternScan_ZF_ZZ_1,HMMPfam_WW,HMMSmart_SM00456,PatternScan_WW_DOMAIN_1,superfamily_WW domain,PatternScan_ACTININ_1,PatternScan_ACTININ_2,HMMPfam_CH,HMMSmart_SM00033,HMMPfam_Spectrin,superfamily_Prefoldin,superfamily_t-snare proteins,HMMPfam_efhand_1,HMMPfam_efhand_2,superfamily_Calponin-homology domain CH-domain,HMMSmart_SM00150,superfamily_Spectrin repeat,superfamily_EF-hand	-	no_errors
DMD	1756	genome.wustl.edu	37	X	32481659	32481659	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A8-A09X-01A-11W-A019-09	TCGA-A8-A09X-10A-01W-A021-09	T	T	T	G	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48e532ea-2af5-427a-a784-781e208cced6	a0a00bdd-dfc0-4707-9491-d509f218d623	X	32481659	32481659	T	G	SNP	DMD	NM_004006.2	human	genbank	58_37c	-1	reviewed	missense	c.3329	p.E1110A	1.000	HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_Spectrin repeat	HMMPfam_ZZ,HMMSmart_SM00291,PatternScan_ZF_ZZ_1,HMMPfam_WW,HMMSmart_SM00456,PatternScan_WW_DOMAIN_1,superfamily_WW domain,PatternScan_ACTININ_1,PatternScan_ACTININ_2,HMMPfam_CH,HMMSmart_SM00033,HMMPfam_Spectrin,superfamily_Prefoldin,superfamily_t-snare proteins,HMMPfam_efhand_1,HMMPfam_efhand_2,superfamily_Calponin-homology domain CH-domain,HMMSmart_SM00150,superfamily_Spectrin repeat,superfamily_EF-hand	-	no_errors
FGFR2	2263	genome.wustl.edu	37	10	123256149	123256149	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A09X-01A-11W-A019-09	TCGA-A8-A09X-10A-01W-A021-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48e532ea-2af5-427a-a784-781e208cced6	a0a00bdd-dfc0-4707-9491-d509f218d623	10	123256149	123256149	G	C	SNP	FGFR2	NM_022970.3	human	genbank	58_37c	-1	reviewed	missense	c.1763	p.S588C	1.000	HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,superfamily_Kinase_like	HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,HMMSmart_IGc2,PatternScan_PROTEIN_KINASE_TYR,superfamily_Kinase_like,HMMPfam_I-set,HMMPfam_ig,PatternScan_PROTEIN_KINASE_ATP,superfamily_SSF48726	-	no_errors
GCH1	2643	genome.wustl.edu	37	14	55310747	55310747	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A09X-01A-11W-A019-09	TCGA-A8-A09X-10A-01W-A021-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48e532ea-2af5-427a-a784-781e208cced6	a0a00bdd-dfc0-4707-9491-d509f218d623	14	55310747	55310747	G	A	SNP	GCH1	NM_000161.2	human	genbank	58_37c	-1	reviewed	silent	c.741	p.L247	1.000	superfamily_Tetrahydrobiopterin biosynthesis enzymes-like	PatternScan_GTP_CYCLOHYDROL_1_1,PatternScan_GTP_CYCLOHYDROL_1_2,HMMPfam_GTP_cyclohydroI,superfamily_Tetrahydrobiopterin biosynthesis enzymes-like	-	no_errors
GNE	10020	genome.wustl.edu	37	9	36217532	36217532	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A09X-01A-11W-A019-09	TCGA-A8-A09X-10A-01W-A021-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48e532ea-2af5-427a-a784-781e208cced6	a0a00bdd-dfc0-4707-9491-d509f218d623	9	36217532	36217532	G	T	SNP	GNE	NM_001128227.1	human	genbank	58_37c	-1	reviewed	missense	c.2092	p.L698I	1.000	superfamily_SSF53067	HMMPfam_ROK,HMMPfam_Epimerase_2,superfamily_SSF53067,superfamily_SSF53756	-	no_errors
GPD1L	23171	genome.wustl.edu	37	3	32180207	32180207	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A09X-01A-11W-A019-09	TCGA-A8-A09X-10A-01W-A021-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48e532ea-2af5-427a-a784-781e208cced6	a0a00bdd-dfc0-4707-9491-d509f218d623	3	32180207	32180207	C	T	SNP	GPD1L	ENST00000428684	human	ensembl	58_37c	+1	known	missense	c.176	p.S59L	0.999	NULL	NULL	-	no_errors
GPR112	139378	genome.wustl.edu	37	X	135455156	135455156	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A09X-01A-11W-A019-09	TCGA-A8-A09X-10A-01W-A021-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48e532ea-2af5-427a-a784-781e208cced6	a0a00bdd-dfc0-4707-9491-d509f218d623	X	135455156	135455156	G	A	SNP	GPR112	NM_153834.3	human	genbank	58_37c	+1	reviewed	missense	c.7709	p.R2570Q	0.013	NULL	HMMPfam_GPS,HMMSmart_GPS,HMMPfam_7tm_2,superfamily_ConA_like_lec_gl,PatternScan_G_PROTEIN_RECEP_F2_2	-	no_errors
GPR155	151556	genome.wustl.edu	37	2	175324714	175324714	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A09X-01A-11W-A019-09	TCGA-A8-A09X-10A-01W-A021-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48e532ea-2af5-427a-a784-781e208cced6	a0a00bdd-dfc0-4707-9491-d509f218d623	2	175324714	175324714	C	A	SNP	GPR155	NM_001033045.2	human	genbank	58_37c	-1	validated	missense	c.1663	p.D555Y	0.990	NULL	"HMMPfam_DEP,HMMSmart_SM00049,HMMPfam_Mem_trans,superfamily_""Winged helix"" DNA-binding domain"	-	no_errors
KIF18A	81930	genome.wustl.edu	37	11	28119324	28119324	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A09X-01A-11W-A019-09	TCGA-A8-A09X-10A-01W-A021-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48e532ea-2af5-427a-a784-781e208cced6	a0a00bdd-dfc0-4707-9491-d509f218d623	11	28119324	28119324	C	A	SNP	KIF18A	NM_031217.3	human	genbank	58_37c	-1	validated	missense	c.171	p.K57N	0.998	HMMPfam_Kinesin,HMMSmart_KISc,superfamily_SSF52540	HMMPfam_Kinesin,HMMSmart_KISc,PatternScan_KINESIN_MOTOR_DOMAIN1,superfamily_SSF52540	-	no_errors
LOC100287226	0	genome.wustl.edu	37	19	22497609	22497609	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A09X-01A-11W-A019-09	TCGA-A8-A09X-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	48e532ea-2af5-427a-a784-781e208cced6	a0a00bdd-dfc0-4707-9491-d509f218d623	19	22497609	22497609	G	A	SNP	LOC100287226	XM_002343636.1	human	genbank	58_37c	+1	model	missense	c.991	p.E331K	0.011	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
MACROD2	140733	genome.wustl.edu	37	20	15866446	15866446	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A8-A09X-01A-11W-A019-09	TCGA-A8-A09X-10A-01W-A021-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48e532ea-2af5-427a-a784-781e208cced6	a0a00bdd-dfc0-4707-9491-d509f218d623	20	15866446	15866446	A	G	SNP	MACROD2	NM_080676.5	human	genbank	58_37c	+1	validated	silent	c.765	p.K255	0.999	NULL	HMMPfam_Macro,HMMSmart_A1pp,superfamily_SSF52949	-	no_errors
MAP4K4	9448	genome.wustl.edu	37	2	102504327	102504327	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A09X-01A-11W-A019-09	TCGA-A8-A09X-10A-01W-A021-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48e532ea-2af5-427a-a784-781e208cced6	a0a00bdd-dfc0-4707-9491-d509f218d623	2	102504327	102504327	G	T	SNP	MAP4K4	NM_145686.2	human	genbank	58_37c	+1	reviewed	missense	c.3667	p.V1223F	1.000	HMMPfam_CNH,HMMSmart_SM00036	HMMPfam_CNH,HMMSmart_SM00036,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
MYLK2	85366	genome.wustl.edu	37	20	30419874	30419874	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A09X-01A-11W-A019-09	TCGA-A8-A09X-10A-01W-A021-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48e532ea-2af5-427a-a784-781e208cced6	a0a00bdd-dfc0-4707-9491-d509f218d623	20	30419874	30419874	C	T	SNP	MYLK2	NM_033118.3	human	genbank	58_37c	+1	reviewed	missense	c.1645	p.R549C	1.000	NULL	HMMSmart_S_TKc,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
NOP2	4839	genome.wustl.edu	37	12	6672822	6672822	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A09X-01A-11W-A019-09	TCGA-A8-A09X-10A-01W-A021-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48e532ea-2af5-427a-a784-781e208cced6	a0a00bdd-dfc0-4707-9491-d509f218d623	12	6672822	6672822	C	T	SNP	NOP2	NM_001033714.1	human	genbank	58_37c	-1	validated	missense	c.634	p.E212K	0.919	NULL	HMMPfam_Nol1_Nop2_Fmu,HMMPfam_P120R,PatternScan_NOL1_NOP2_SUN,superfamily_SSF53335	-	no_errors
OR10H1	26539	genome.wustl.edu	37	19	15918448	15918448	+	Missense_Mutation	SNP	C	C	T	rs141400861	unknown	TCGA-A8-A09X-01A-11W-A019-09	TCGA-A8-A09X-10A-01W-A021-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48e532ea-2af5-427a-a784-781e208cced6	a0a00bdd-dfc0-4707-9491-d509f218d623	19	15918448	15918448	C	T	SNP	OR10H1	NM_013940.2	human	genbank	58_37c	-1	validated	missense	c.400	p.V134M	0.128	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
OR4K1	79544	genome.wustl.edu	37	14	20404131	20404131	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A09X-01A-11W-A019-09	TCGA-A8-A09X-10A-01W-A021-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48e532ea-2af5-427a-a784-781e208cced6	a0a00bdd-dfc0-4707-9491-d509f218d623	14	20404131	20404131	C	T	SNP	OR4K1	NM_001004063.2	human	genbank	58_37c	+1	validated	silent	c.306	p.F102	0.037	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
PLCE1	51196	genome.wustl.edu	37	10	96018635	96018635	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A09X-01A-11W-A019-09	TCGA-A8-A09X-10A-01W-A021-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48e532ea-2af5-427a-a784-781e208cced6	a0a00bdd-dfc0-4707-9491-d509f218d623	10	96018635	96018635	C	T	SNP	PLCE1	NM_016341.3	human	genbank	58_37c	+1	reviewed	silent	c.3633	p.S1211	0.993	superfamily_EF-hand	HMMPfam_C2,HMMSmart_SM00239,HMMPfam_RA,HMMSmart_SM00314,HMMPfam_PI-PLC-X,HMMSmart_SM00148,HMMPfam_PI-PLC-Y,HMMSmart_SM00149,HMMPfam_RasGEF,HMMSmart_SM00147,superfamily_Ras GEF,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMPfam_efhand_like,superfamily_PLC-like phosphodiesterases,superfamily_EF-hand	-	no_errors
PNN	5411	genome.wustl.edu	37	14	39648666	39648666	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A09X-01A-11W-A019-09	TCGA-A8-A09X-10A-01W-A021-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48e532ea-2af5-427a-a784-781e208cced6	a0a00bdd-dfc0-4707-9491-d509f218d623	14	39648666	39648666	G	A	SNP	PNN	NM_002687.3	human	genbank	58_37c	+1	validated	missense	c.793	p.A265T	1.000	NULL	HMMPfam_Pinin_SDK_memA,HMMPfam_Pinin_SDK_N	-	no_errors
PPM1L	151742	genome.wustl.edu	37	3	160783285	160783285	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A09X-01A-11W-A019-09	TCGA-A8-A09X-10A-01W-A021-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48e532ea-2af5-427a-a784-781e208cced6	a0a00bdd-dfc0-4707-9491-d509f218d623	3	160783285	160783285	C	T	SNP	PPM1L	NM_139245.2	human	genbank	58_37c	+1	provisional	silent	c.669	p.N223	0.796	HMMSmart_SM00331,HMMSmart_SM00332,superfamily_Protein serine/threonine phosphatase 2C catalytic domain,HMMPfam_PP2C	PatternScan_PP2C,HMMSmart_SM00331,HMMSmart_SM00332,superfamily_Protein serine/threonine phosphatase 2C catalytic domain,HMMPfam_PP2C	-	no_errors
PPP2R5B	5526	genome.wustl.edu	37	11	64695334	64695334	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A09X-01A-11W-A019-09	TCGA-A8-A09X-10A-01W-A021-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48e532ea-2af5-427a-a784-781e208cced6	a0a00bdd-dfc0-4707-9491-d509f218d623	11	64695334	64695334	G	C	SNP	PPP2R5B	NM_006244.3	human	genbank	58_37c	+1	reviewed	missense	c.457	p.E153Q	1.000	HMMPfam_B56	HMMPfam_B56	-	no_errors
PRMT5	10419	genome.wustl.edu	37	14	23395473	23395473	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A09X-01A-11W-A019-09	TCGA-A8-A09X-10A-01W-A021-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48e532ea-2af5-427a-a784-781e208cced6	a0a00bdd-dfc0-4707-9491-d509f218d623	14	23395473	23395473	G	A	SNP	PRMT5	NM_006109.3	human	genbank	58_37c	-1	validated	missense	c.646	p.H216Y	1.000	HMMPfam_PRMT5	HMMPfam_PRMT5,superfamily_S-adenosyl-L-methionine-dependent methyltransferases	-	no_errors
RAB30	27314	genome.wustl.edu	37	11	82693237	82693237	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A09X-01A-11W-A019-09	TCGA-A8-A09X-10A-01W-A021-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48e532ea-2af5-427a-a784-781e208cced6	a0a00bdd-dfc0-4707-9491-d509f218d623	11	82693237	82693237	G	A	SNP	RAB30	NM_014488.3	human	genbank	58_37c	-1	provisional	silent	c.582	p.I194	1.000	HMMSmart_SM00176	HMMSmart_SM00176,HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
RGS9	8787	genome.wustl.edu	37	17	63185416	63185416	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A09X-01A-11W-A019-09	TCGA-A8-A09X-10A-01W-A021-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48e532ea-2af5-427a-a784-781e208cced6	a0a00bdd-dfc0-4707-9491-d509f218d623	17	63185416	63185416	G	A	SNP	RGS9	NM_003835.3	human	genbank	58_37c	+1	reviewed	missense	c.667	p.V223I	0.002	HMMPfam_G-gamma,HMMSmart_SM00224,superfamily_Transducin (heterotrimeric G protein) gamma chain	"HMMPfam_RGS,HMMSmart_SM00315,HMMPfam_DEP,HMMSmart_SM00049,HMMPfam_G-gamma,HMMSmart_SM00224,superfamily_Transducin (heterotrimeric G protein) gamma chain,superfamily_Regulator of G-protein signaling RGS,superfamily_""Winged helix"" DNA-binding domain"	-	no_errors
SCFD1	23256	genome.wustl.edu	37	14	31144222	31144222	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A8-A09X-01A-11W-A019-09	TCGA-A8-A09X-10A-01W-A021-09	T	T	T	G	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48e532ea-2af5-427a-a784-781e208cced6	a0a00bdd-dfc0-4707-9491-d509f218d623	14	31144222	31144222	T	G	SNP	SCFD1	NM_016106.2	human	genbank	58_37c	+1	validated	missense	c.1193	p.L398R	1.000	HMMPfam_Sec1,superfamily_Sec1-like	HMMPfam_Sec1,superfamily_Sec1-like	-	no_errors
SCNM1	79005	genome.wustl.edu	37	1	151138644	151138644	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A09X-01A-11W-A019-09	TCGA-A8-A09X-10A-01W-A021-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48e532ea-2af5-427a-a784-781e208cced6	a0a00bdd-dfc0-4707-9491-d509f218d623	1	151138644	151138644	G	A	SNP	SCNM1	NM_024041.2	human	genbank	58_37c	+1	validated	missense	c.16	p.E6K	1.000	NULL	NULL	-	no_errors
SEL1L3	23231	genome.wustl.edu	37	4	25831746	25831746	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A09X-01A-11W-A019-09	TCGA-A8-A09X-10A-01W-A021-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48e532ea-2af5-427a-a784-781e208cced6	a0a00bdd-dfc0-4707-9491-d509f218d623	4	25831746	25831746	C	G	SNP	SEL1L3	NM_015187.3	human	genbank	58_37c	-1	validated	missense	c.1131	p.L377F	0.999	NULL	HMMPfam_Sel1,HMMSmart_SM00671,superfamily_HCP-like	-	no_errors
STAT4	6775	genome.wustl.edu	37	2	191919242	191919242	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A8-A09X-01A-11W-A019-09	TCGA-A8-A09X-10A-01W-A021-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48e532ea-2af5-427a-a784-781e208cced6	a0a00bdd-dfc0-4707-9491-d509f218d623	2	191919242	191919242	A	G	SNP	STAT4	NM_003151.2	human	genbank	58_37c	-1	reviewed	missense	c.1225	p.S409P	1.000	superfamily_P53_like_DNA_bnd,HMMPfam_STAT_bind	HMMPfam_SH2,HMMSmart_SH2,superfamily_P53_like_DNA_bnd,HMMPfam_STAT_int,superfamily_STAT,HMMPfam_STAT_alpha,HMMPfam_STAT_bind,superfamily_SSF55550	-	no_errors
STAU1	6780	genome.wustl.edu	37	20	47734890	47734890	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A09X-01A-11W-A019-09	TCGA-A8-A09X-10A-01W-A021-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48e532ea-2af5-427a-a784-781e208cced6	a0a00bdd-dfc0-4707-9491-d509f218d623	20	47734890	47734890	G	A	SNP	STAU1	NM_017453.2	human	genbank	58_37c	-1	reviewed	missense	c.1169	p.S390F	1.000	NULL	HMMPfam_dsrm,HMMSmart_SM00358,superfamily_dsRNA-binding domain-like	-	no_errors
SVEP1	79987	genome.wustl.edu	37	9	113312283	113312283	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A09X-01A-11W-A019-09	TCGA-A8-A09X-10A-01W-A021-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48e532ea-2af5-427a-a784-781e208cced6	a0a00bdd-dfc0-4707-9491-d509f218d623	9	113312283	113312283	C	T	SNP	SVEP1	NM_153366.3	human	genbank	58_37c	-1	validated	silent	c.633	p.L211	0.998	HMMPfam_VWA,HMMSmart_SM00327,superfamily_vWA-like	PatternScan_ASX_HYDROXYL,HMMPfam_Sushi,HMMSmart_SM00032,HMMPfam_Pentaxin,HMMSmart_SM00159,HMMSmart_SM00179,HMMPfam_VWA,HMMSmart_SM00327,HMMPfam_HYR,HMMPfam_EGF,HMMSmart_SM00181,superfamily_Concanavalin A-like lectins/glucanases,superfamily_Growth factor receptor domain,HMMPfam_GCC2_GCC3,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF_CA,HMMPfam_EGF_2,superfamily_Complement control module/SCR domain,PatternScan_EGF_CA,superfamily_vWA-like,superfamily_EGF/Laminin	-	no_errors
TMEM104	54868	genome.wustl.edu	37	17	72786401	72786401	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A09X-01A-11W-A019-09	TCGA-A8-A09X-10A-01W-A021-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48e532ea-2af5-427a-a784-781e208cced6	a0a00bdd-dfc0-4707-9491-d509f218d623	17	72786401	72786401	C	T	SNP	TMEM104	NM_017728.3	human	genbank	58_37c	+1	validated	silent	c.312	p.Y104	0.992	NULL	HMMPfam_Aa_trans	-	no_errors
TP53	7157	genome.wustl.edu	37	17	7577543	7577543	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A09X-01A-11W-A019-09	TCGA-A8-A09X-10A-01W-A021-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48e532ea-2af5-427a-a784-781e208cced6	a0a00bdd-dfc0-4707-9491-d509f218d623	17	7577543	7577543	C	T	SNP	TP53	NM_000546.4	human	genbank	58_37c	-1	reviewed	missense	c.738	p.M246I	1.000	PatternScan_P53,superfamily_p53-like transcription factors,HMMPfam_P53	PatternScan_P53,superfamily_p53-like transcription factors,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain,HMMPfam_P53,HMMPfam_P53_TAD	-	no_errors
TSTD2	158427	genome.wustl.edu	37	9	100368473	100368473	+	Silent	SNP	T	T	C	novel	unknown	TCGA-A8-A09X-01A-11W-A019-09	TCGA-A8-A09X-10A-01W-A021-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48e532ea-2af5-427a-a784-781e208cced6	a0a00bdd-dfc0-4707-9491-d509f218d623	9	100368473	100368473	T	C	SNP	TSTD2	NM_139246.4	human	genbank	58_37c	-1	validated	silent	c.906	p.Q302	0.630	HMMPfam_Rhodanese,HMMSmart_SM00450,superfamily_Rhodanese/Cell cycle control phosphatase	HMMPfam_Rhodanese,HMMSmart_SM00450,superfamily_Rhodanese/Cell cycle control phosphatase	-	no_errors
VPS18	57617	genome.wustl.edu	37	15	41191587	41191587	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A09X-01A-11W-A019-09	TCGA-A8-A09X-10A-01W-A021-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48e532ea-2af5-427a-a784-781e208cced6	a0a00bdd-dfc0-4707-9491-d509f218d623	15	41191587	41191587	C	T	SNP	VPS18	NM_020857.2	human	genbank	58_37c	+1	reviewed	missense	c.571	p.R191C	1.000	NULL	HMMPfam_Pep3_Vps18,superfamily_ARM repeat	-	no_errors
ZBTB5	9925	genome.wustl.edu	37	9	37441772	37441772	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A09X-01A-11W-A019-09	TCGA-A8-A09X-10A-01W-A021-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48e532ea-2af5-427a-a784-781e208cced6	a0a00bdd-dfc0-4707-9491-d509f218d623	9	37441772	37441772	C	T	SNP	ZBTB5	NM_014872.2	human	genbank	58_37c	-1	validated	missense	c.777	p.M259I	1.000	NULL	HMMSmart_SM00225,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,superfamily_POZ domain,HMMPfam_BTB,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZFPM2	23414	genome.wustl.edu	37	8	106646553	106646553	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A8-A09X-01A-11W-A019-09	TCGA-A8-A09X-10A-01W-A021-09	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48e532ea-2af5-427a-a784-781e208cced6	a0a00bdd-dfc0-4707-9491-d509f218d623	8	106646553	106646553	A	T	SNP	ZFPM2	NM_012082.3	human	genbank	58_37c	+1	reviewed	missense	c.500	p.D167V	1.000	NULL	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZNF266	10781	genome.wustl.edu	37	19	9524313	9524313	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A09X-01A-11W-A019-09	TCGA-A8-A09X-10A-01W-A021-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48e532ea-2af5-427a-a784-781e208cced6	a0a00bdd-dfc0-4707-9491-d509f218d623	19	9524313	9524313	G	A	SNP	ZNF266	NM_006631.2	human	genbank	58_37c	-1	validated	missense	c.1288	p.H430Y	0.996	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	HMMSmart_KRAB,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
ZNF532	55205	genome.wustl.edu	37	18	56586482	56586482	+	Silent	SNP	C	C	T	rs149812809	unknown	TCGA-A8-A09X-01A-11W-A019-09	TCGA-A8-A09X-10A-01W-A021-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	48e532ea-2af5-427a-a784-781e208cced6	a0a00bdd-dfc0-4707-9491-d509f218d623	18	56586482	56586482	C	T	SNP	ZNF532	NM_018181.4	human	genbank	58_37c	+1	validated	silent	c.963	p.I321	0.888	NULL	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2	-	no_errors
