Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ABCG4	64137	genome.wustl.edu	37	11	119027378	119027378	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	11	119027378	119027378	G	A	SNP	ABCG4	NM_001142505.1	human	genbank	58_37c	+1	reviewed	silent	c.915	p.P305	0.009	NULL	HMMPfam_ABC_tran,HMMSmart_SM00382,HMMPfam_ABC2_membrane,PatternScan_ABC_TRANSPORTER_1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
ADAMTS18	170692	genome.wustl.edu	37	16	77323239	77323239	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	A	A	A	C	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	16	77323239	77323239	A	C	SNP	ADAMTS18	NM_199355.2	human	genbank	58_37c	-1	reviewed	missense	c.3472	p.S1158A	0.986	HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat	"HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat,HMMPfam_Reprolysin,HMMPfam_Pep_M12B_propep,HMMPfam_ADAM_spacer1,HMMPfam_PLAC,superfamily_Metalloproteases (""zincins"") catalytic domain"	-	no_errors
ALPI	248	genome.wustl.edu	37	2	233323663	233323663	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	2	233323663	233323663	C	T	SNP	ALPI	NM_001631.3	human	genbank	58_37c	+1	reviewed	missense	c.1394	p.A465V	1.000	HMMPfam_Alk_phosphatase,HMMSmart_SM00098,superfamily_Alkaline phosphatase-like	HMMPfam_Alk_phosphatase,HMMSmart_SM00098,superfamily_Alkaline phosphatase-like,PatternScan_ALKALINE_PHOSPHATASE	-	no_errors
AP1S3	130340	genome.wustl.edu	37	2	224642566	224642566	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	2	224642566	224642566	G	T	SNP	AP1S3	NM_001039569.1	human	genbank	58_37c	-1	validated	missense	c.24	p.F8L	1.000	HMMPfam_Clat_adaptor_s,superfamily_SNARE-like	HMMPfam_Clat_adaptor_s,PatternScan_CLAT_ADAPTOR_S,superfamily_SNARE-like	-	no_errors
ARID4A	5926	genome.wustl.edu	37	14	58811468	58811468	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	14	58811468	58811468	A	G	SNP	ARID4A	NM_002892.3	human	genbank	58_37c	+1	reviewed	missense	c.962	p.K321R	1.000	HMMPfam_ARID,HMMSmart_SM00501,superfamily_ARID-like	HMMSmart_SM00298,HMMPfam_ARID,HMMSmart_SM00501,superfamily_ARID-like,HMMSmart_SM00333,HMMPfam_RBB1NT	-	no_errors
C2orf71	388939	genome.wustl.edu	37	2	29294240	29294240	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	2	29294240	29294240	G	A	SNP	C2orf71	NM_001029883.1	human	genbank	58_37c	-1	provisional	missense	c.2888	p.S963F	0.108	NULL	NULL	-	no_errors
CDH10	1008	genome.wustl.edu	37	5	24593491	24593491	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	5	24593491	24593491	A	T	SNP	CDH10	NM_006727.2	human	genbank	58_37c	-1	reviewed	missense	c.109	p.L37I	0.008	NULL	HMMPfam_Cadherin_C,HMMPfam_Cadherin,HMMSmart_CA,PatternScan_CADHERIN_1,superfamily_Cadherin	-	no_errors
CDHR1	0	genome.wustl.edu	37	10	85961584	85961584	+	Missense_Mutation	SNP	G	G	A	rs142109115	byCluster;byFrequency;by1000genomes	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	10	85961584	85961584	G	A	SNP	CDHR1	NM_033100.2	human	genbank	58_37c	+1	reviewed	missense	c.547	p.V183M	0.095	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like	HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,superfamily_Cadherin-like	-	no_errors
CHST11	50515	genome.wustl.edu	37	12	105150997	105150997	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	12	105150997	105150997	G	A	SNP	CHST11	NM_018413.5	human	genbank	58_37c	+1	validated	missense	c.475	p.A159T	0.968	HMMPfam_Sulfotransfer_2	HMMPfam_Sulfotransfer_2	-	no_errors
CLCN3	1182	genome.wustl.edu	37	4	170634389	170634389	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	T	T	T	G	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	4	170634389	170634389	T	G	SNP	CLCN3	NM_173872.2	human	genbank	58_37c	+1	validated	missense	c.2309	p.I770S	0.999	HMMPfam_CBS,HMMSmart_CBS,superfamily_SSF54631	HMMPfam_CBS,HMMSmart_CBS,HMMPfam_Voltage_CLC,superfamily_Cl-channel_core,superfamily_SSF54631	-	no_errors
CLEC4G	339390	genome.wustl.edu	37	19	7794763	7794763	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	19	7794763	7794763	G	A	SNP	CLEC4G	NM_198492.3	human	genbank	58_37c	-1	validated	silent	c.687	p.R229	0.000	HMMPfam_Lectin_C,HMMSmart_SM00034,superfamily_C-type lectin-like	HMMPfam_Lectin_C,HMMSmart_SM00034,superfamily_C-type lectin-like,PatternScan_C_TYPE_LECTIN_1	-	no_errors
DCAF4L2	138009	genome.wustl.edu	37	8	88885211	88885211	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	8	88885211	88885211	G	A	SNP	DCAF4L2	NM_152418.3	human	genbank	58_37c	-1	validated	missense	c.989	p.A330V	0.986	HMMSmart_WD40,superfamily_WD40_like	HMMSmart_WD40,superfamily_WD40_like,PatternScan_WD_REPEATS_1,HMMPfam_WD40	-	no_errors
DEAF1	10522	genome.wustl.edu	37	11	654011	654012	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	-	-	-	A	-	-	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	11	654011	654012	-	A	INS	DEAF1	NM_021008.2	human	genbank	58_37c	-1	validated	frame_shift_ins	c.1544_1543	p.C515fs	1.000:1.000	HMMPfam_zf-MYND,PatternScan_ZF_MYND_1	HMMPfam_SAND,HMMSmart_SM00258,HMMPfam_zf-MYND,PatternScan_ZF_MYND_1,superfamily_SAND domain-like	-	no_errors
EFHC2	80258	genome.wustl.edu	37	X	44091738	44091738	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	X	44091738	44091738	T	A	SNP	EFHC2	ENST00000333807	human	ensembl	58_37c	-1	known	missense	c.1609	p.N537Y	0.058	HMMSmart_SM00676	HMMSmart_SM00676,HMMPfam_DUF1126,superfamily_EF-hand	-	no_errors
EGFR	1956	genome.wustl.edu	37	7	55229270	55229270	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	7	55229270	55229270	G	C	SNP	EGFR	NM_005228.3	human	genbank	58_37c	+1	reviewed	missense	c.1577	p.C526S	1.000	HMMPfam_Furin-like,HMMSmart_SM00261,superfamily_Growth factor receptor domain	HMMPfam_Recep_L_domain,HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Furin-like,HMMSmart_SM00261,PatternScan_PROTEIN_KINASE_TYR,superfamily_Growth factor receptor domain,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,superfamily_L domain-like	-	no_errors
EIF4A2	1974	genome.wustl.edu	37	3	186502374	186502374	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	3	186502374	186502374	G	A	SNP	EIF4A2	NM_001967.3	human	genbank	58_37c	+1	validated	missense	c.97	p.D33N	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases	PatternScan_DEAD_ATP_HELICASE,HMMPfam_Helicase_C,HMMSmart_SM00490,HMMPfam_DEAD,HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
ENSG00000152117	0	genome.wustl.edu	37	2	132258945	132258945	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	2	132258945	132258945	C	T	SNP	LOC150776	NR_026922.1	human	genbank	58_37c	+1	validated	rna	NULL	NULL	0.893	-	-	-	pseudogene
ENSG00000210082	0	genome.wustl.edu	37	MT	3019	3019	+	RNA	SNP	G	A	A	novel	unknown	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	MT	3019	3019	G	A	SNP	ENSG00000210082	ENST00000387347	human	ensembl	58_37c	+1	known	rna	NULL	NULL	NULL	-	-	-	no_errors
ENSG00000246141	0	genome.wustl.edu	37	1	19666218	19666218	+	RNA	SNP	G	G	A	novel	unknown	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	1	19666218	19666218	G	A	SNP	CAPZB	ENST00000375145	human	ensembl	58_37c	-1	known	intronic	c.918-107	e10-107	0.000	-	-	-	no_errors
ENSG00000247869	0	genome.wustl.edu	37	10	29751492	29751495	+	RNA	DEL	TGTT	TGTT	-	rs3831126	byCluster	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	TGTT	TGTT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	10	29751492	29751495	TGTT	-	DEL	SVIL	NM_021738.2	human	genbank	58_37c	-1	reviewed	intronic	c.6278-165_6278-162	e33-162	0.002:0.002:0.002:0.001	-	-	-	no_errors
EPB41L4A	64097	genome.wustl.edu	37	5	111643142	111643142	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	5	111643142	111643142	C	T	SNP	EPB41L4A	NM_022140.3	human	genbank	58_37c	-1	validated	missense	c.145	p.V49I	0.984	HMMPfam_FERM_N,HMMSmart_SM00295,superfamily_Ubiquitin-like	HMMPfam_FA,HMMPfam_FERM_N,HMMPfam_FERM_C,PatternScan_FERM_1,PatternScan_FERM_2,HMMPfam_FERM_M,superfamily_Second domain of FERM,HMMSmart_SM00295,superfamily_PH domain-like,superfamily_Ubiquitin-like	-	no_errors
FAM164A	51101	genome.wustl.edu	37	8	79601467	79601467	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	8	79601467	79601467	A	G	SNP	FAM164A	NM_016010.2	human	genbank	58_37c	+1	validated	silent	c.363	p.Q121	1.000	NULL	NULL	-	no_errors
FAM48B1	170067	genome.wustl.edu	37	X	24381686	24381686	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	A	A	A	C	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	X	24381686	24381686	A	C	SNP	FAM48B1	NM_001136234.1	human	genbank	58_37c	+1	inferred	missense	c.809	p.K270T	0.000	NULL	NULL	-	no_errors
FAM5C	339479	genome.wustl.edu	37	1	190250765	190250765	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	1	190250765	190250765	G	A	SNP	FAM5C	NM_199051.1	human	genbank	58_37c	-1	provisional	missense	c.352	p.P118S	1.000	HMMPfam_MACPF,HMMSmart_SM00457	HMMPfam_MACPF,HMMSmart_SM00457	-	no_errors
FAT3	120114	genome.wustl.edu	37	11	92592359	92592359	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	11	92592359	92592359	C	G	SNP	FAT3	NM_001008781.2	human	genbank	58_37c	+1	validated	missense	c.11529	p.N3843K	1.000	superfamily_Concanavalin A-like lectins/glucanases	PatternScan_ASX_HYDROXYL,HMMSmart_SM00282,HMMSmart_SM00179,HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_EGF,HMMSmart_SM00181,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_2,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_Cadherin-like,PatternScan_EGF_CA,superfamily_EGF/Laminin	-	no_errors
FBXO38	81545	genome.wustl.edu	37	5	147793787	147793787	+	Silent	SNP	A	A	T	novel	unknown	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	5	147793787	147793787	A	T	SNP	FBXO38	NM_205836.1	human	genbank	58_37c	+1	validated	silent	c.1182	p.A394	0.993	superfamily_RNI-like	HMMPfam_F-box,superfamily_RNI-like,superfamily_F-box domain	-	no_errors
GATAD2B	57459	genome.wustl.edu	37	1	153800546	153800546	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	1	153800546	153800546	C	T	SNP	GATAD2B	NM_020699.2	human	genbank	58_37c	-1	validated	missense	c.278	p.G93E	1.000	NULL	HMMPfam_GATA,PatternScan_GATA_ZN_FINGER_1,superfamily_SSF57716	-	no_errors
GCGR	2642	genome.wustl.edu	37	17	79769688	79769688	+	Splice_Site	SNP	T	T	G	novel	unknown	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	17	79769688	79769688	T	G	SNP	GCGR	ENST00000400723	human	ensembl	58_37c	+1	known	splice_site	c.817+2	e7+2	1.000	-	-	-	no_errors
GJA5	2702	genome.wustl.edu	37	1	147230643	147230643	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	1	147230643	147230643	C	T	SNP	GJA5	NM_005266.5	human	genbank	58_37c	-1	reviewed	missense	c.704	p.R235K	0.000	NULL	HMMPfam_Connexin,HMMSmart_CNX,PatternScan_CONNEXINS_1,PatternScan_CONNEXINS_2,HMMPfam_Connexin_CCC	-	no_errors
HEATR6	63897	genome.wustl.edu	37	17	58124731	58124731	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	17	58124731	58124731	G	C	SNP	HEATR6	NM_022070.4	human	genbank	58_37c	-1	validated	missense	c.2708	p.S903C	1.000	superfamily_ARM-type_fold	HMMPfam_HEAT,superfamily_ARM-type_fold	-	no_errors
HEPHL1	341208	genome.wustl.edu	37	11	93800913	93800913	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	11	93800913	93800913	C	A	SNP	HEPHL1	NM_001098672.1	human	genbank	58_37c	+1	validated	missense	c.1060	p.Q354K	0.976	PatternScan_MULTICOPPER_OXIDASE1,superfamily_Cupredoxin,HMMPfam_Cu-oxidase_2	PatternScan_MULTICOPPER_OXIDASE1,PatternScan_MULTICOPPER_OXIDASE2,superfamily_Cupredoxin,HMMPfam_Cu-oxidase_2,HMMPfam_Cu-oxidase_3	-	no_errors
KHDRBS2	202559	genome.wustl.edu	37	6	62611156	62611156	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	6	62611156	62611156	G	T	SNP	KHDRBS2	NM_152688.2	human	genbank	58_37c	-1	validated	missense	c.604	p.P202T	1.000	superfamily_SSF54791	HMMSmart_KH,HMMPfam_KH_1,superfamily_SSF54791	-	no_errors
KIF18A	81930	genome.wustl.edu	37	11	28042770	28042770	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	11	28042770	28042770	T	C	SNP	KIF18A	NM_031217.3	human	genbank	58_37c	-1	validated	missense	c.2674	p.I892V	0.997	NULL	HMMPfam_Kinesin,HMMSmart_KISc,PatternScan_KINESIN_MOTOR_DOMAIN1,superfamily_SSF52540	-	no_errors
KIF19	124602	genome.wustl.edu	37	17	72350488	72350488	+	Silent	SNP	G	G	A	rs61748941	byFrequency;by1000genomes	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	17	72350488	72350488	G	A	SNP	KIF19	NM_153209.3	human	genbank	58_37c	+1	validated	silent	c.2496	p.P832	0.008	NULL	HMMPfam_Kinesin,HMMSmart_SM00129,PatternScan_KINESIN_MOTOR_DOMAIN1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
KIF4A	24137	genome.wustl.edu	37	X	69639547	69639547	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	X	69639547	69639547	G	A	SNP	KIF4A	NM_012310.4	human	genbank	58_37c	+1	reviewed	missense	c.3409	p.E1137K	0.997	NULL	HMMPfam_Kinesin,HMMSmart_SM00129,PatternScan_KINESIN_MOTOR_DOMAIN1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
LEPR	3953	genome.wustl.edu	37	1	66098839	66098839	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	1	66098839	66098839	C	T	SNP	LEPR	NM_001003679.2	human	genbank	58_37c	+1	reviewed	missense	c.2678	p.T893M	0.834	NULL	PatternScan_HEMATOPO_REC_L_F2,PatternScan_HEMATOPO_REC_S_F1,HMMPfam_fn3,HMMSmart_FN3,superfamily_FN_III-like,HMMPfam_Lep_receptor_Ig	-	no_errors
LOC100287146	0	genome.wustl.edu	37	6	30691970	30691970	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	6	30691970	30691970	C	T	SNP	LOC100287146	XM_002342618.1	human	genbank	58_37c	-1	model	missense	c.226	p.E76K	0.987	NULL	NULL	-	no_errors
LOC643827	0	genome.wustl.edu	37	9	65626620	65626620	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	9	65626620	65626620	A	G	SNP	LOC643827	XM_001714537.2	human	genbank	58_37c	+1	model	silent	c.1527	p.A509	0.539	superfamily_Concanavalin A-like lectins/glucanases	HMMSmart_SM00282,superfamily_Fibrinogen C-terminal domain-like,HMMPfam_EGF,HMMSmart_SM00181,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_2,PatternScan_GLYCO_HORMONE_BETA_1	-	no_errors
LOXHD1	125336	genome.wustl.edu	37	18	44089642	44089642	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	18	44089642	44089642	G	A	SNP	LOXHD1	NM_144612.6	human	genbank	58_37c	-1	reviewed	missense	c.4516	p.H1506Y	0.000	superfamily_Lipase_LipOase	HMMPfam_PLAT,HMMSmart_LH2,superfamily_Lipase_LipOase	-	no_errors
LRRC16B	90668	genome.wustl.edu	37	14	24527046	24527046	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	14	24527046	24527046	A	C	SNP	LRRC16B	NM_138360.3	human	genbank	58_37c	+1	validated	missense	c.1175	p.H392P	1.000	superfamily_RNI-like	HMMSmart_SM00368,superfamily_RNI-like	-	no_errors
MAEL	84944	genome.wustl.edu	37	1	166962031	166962031	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	1	166962031	166962031	C	T	SNP	MAEL	NM_032858.1	human	genbank	58_37c	+1	validated	missense	c.434	p.S145F	1.000	NULL	superfamily_HMG-box,HMMPfam_DUF1898	-	no_errors
MAPK8IP2	23542	genome.wustl.edu	37	22	51044277	51044277	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	22	51044277	51044277	T	G	SNP	MAPK8IP2	ENST00000329492	human	ensembl	58_37c	+1	known	missense	c.2036	p.V679G	1.000	HMMSmart_SM00462,superfamily_PH domain-like	HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain,HMMPfam_PID,HMMSmart_SM00462,superfamily_PH domain-like	-	no_errors
MAX	4149	genome.wustl.edu	37	14	65543344	65543344	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	14	65543344	65543344	C	T	SNP	MAX	NM_002382.3	human	genbank	58_37c	-1	reviewed	silent	c.333	p.L111	1.000	NULL	HMMPfam_HLH,HMMSmart_SM00353,superfamily_HLH helix-loop-helix DNA-binding domain	-	no_errors
MEF2C	4208	genome.wustl.edu	37	5	88057005	88057005	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	5	88057005	88057005	C	A	SNP	MEF2C	NM_002397.3	human	genbank	58_37c	-1	validated	missense	c.399	p.L133F	1.000	NULL	HMMPfam_SRF-TF,HMMSmart_SM00432,PatternScan_MADS_BOX_1,superfamily_SRF-like	-	no_errors
MIR519A2	0	genome.wustl.edu	37	19	54265645	54265645	+	RNA	SNP	G	G	T	novel	unknown	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	19	54265645	54265645	G	T	SNP	MIR519A2	ENST00000384990	human	ensembl	58_37c	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors
MYH7B	57644	genome.wustl.edu	37	20	33575438	33575438	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	20	33575438	33575438	T	C	SNP	MYH7B	NM_020884.3	human	genbank	58_37c	+1	reviewed	missense	c.1352	p.V451A	1.000	HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases	PatternScan_THIOL_PROTEASE_HIS,HMMPfam_Myosin_head,HMMSmart_SM00242,HMMPfam_Myosin_tail_1,HMMPfam_Myosin_N,superfamily_Prefoldin,superfamily_tRNA-binding arm,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
MYH7B	57644	genome.wustl.edu	37	20	33580963	33580963	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	20	33580963	33580963	G	A	SNP	MYH7B	NM_020884.3	human	genbank	58_37c	+1	reviewed	missense	c.2368	p.A790T	1.000	HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases	PatternScan_THIOL_PROTEASE_HIS,HMMPfam_Myosin_head,HMMSmart_SM00242,HMMPfam_Myosin_tail_1,HMMPfam_Myosin_N,superfamily_Prefoldin,superfamily_tRNA-binding arm,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
NANS	54187	genome.wustl.edu	37	9	100819126	100819126	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	9	100819126	100819126	G	A	SNP	NANS	NM_018946.3	human	genbank	58_37c	+1	reviewed	nonsense	c.36	p.W12*	1.000	superfamily_Aldolase	superfamily_AFP III-like domain (Pfam 01354),HMMPfam_NeuB,HMMPfam_SAF,superfamily_Aldolase	-	no_errors
NBEAL1	65065	genome.wustl.edu	37	2	204016280	204016280	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	2	204016280	204016280	A	G	SNP	NBEAL1	NM_001114132.1	human	genbank	58_37c	+1	validated	missense	c.5468	p.H1823R	0.997	NULL	HMMPfam_Beach,superfamily_BEACH domain,HMMSmart_SM00320,PatternScan_5_NUCLEOTIDASE_1,superfamily_WD40 repeat-like,superfamily_ARM repeat,HMMPfam_WD40,superfamily_PH domain-like	-	no_errors
NCOR1	9611	genome.wustl.edu	37	17	15978874	15978874	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	17	15978874	15978874	T	C	SNP	NCOR1	NM_006311.2	human	genbank	58_37c	-1	reviewed	missense	c.3644	p.K1215R	1.000	NULL	HMMSmart_SM00717,superfamily_Homeodomain-like,HMMPfam_Myb_DNA-binding	-	no_errors
NEB	4703	genome.wustl.edu	37	2	152409230	152409230	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	2	152409230	152409230	G	T	SNP	NEB	NM_004543.4	human	genbank	58_37c	-1	reviewed	missense	c.14689	p.P4897T	1.000	HMMPfam_Nebulin,HMMSmart_SM00227	HMMPfam_Nebulin,HMMSmart_SM00227,HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain	-	no_errors
NECAB1	64168	genome.wustl.edu	37	8	91836960	91836960	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	8	91836960	91836960	C	A	SNP	NECAB1	NM_022351.4	human	genbank	58_37c	+1	validated	missense	c.140	p.S47Y	1.000	HMMSmart_SM00054,PatternScan_EF_HAND_1,HMMPfam_efhand,superfamily_EF-hand	HMMSmart_SM00054,HMMPfam_ABM,superfamily_Dimeric alpha beta barrel,PatternScan_EF_HAND_1,HMMPfam_efhand,superfamily_EF-hand	-	no_errors
OPRK1	4986	genome.wustl.edu	37	8	54142245	54142245	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	8	54142245	54142245	C	T	SNP	OPRK1	NM_000912.3	human	genbank	58_37c	-1	validated	missense	c.755	p.R252H	1.000	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
OR10H2	26538	genome.wustl.edu	37	19	15839451	15839451	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	19	15839451	15839451	G	A	SNP	OR10H2	NM_013939.2	human	genbank	58_37c	+1	validated	missense	c.598	p.V200M	0.000	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
PCDH1	5097	genome.wustl.edu	37	5	141243846	141243846	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	5	141243846	141243846	G	A	SNP	PCDH1	NM_032420.2	human	genbank	58_37c	-1	reviewed	nonsense	c.2050	p.Q684*	1.000	HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin	HMMPfam_Cadherin,HMMSmart_CA,PatternScan_CADHERIN_1,HMMPfam_Cadherin_2,HMMPfam_Protocadherin,superfamily_Cadherin,PatternScan_GREAB_2	-	no_errors
POU6F1	5463	genome.wustl.edu	37	12	51586227	51586227	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	12	51586227	51586227	C	T	SNP	POU6F1	NM_002702.3	human	genbank	58_37c	-1	validated	missense	c.277	p.V93M	0.000	NULL	HMMPfam_Pou,HMMSmart_SM00352,PatternScan_POU_1,PatternScan_POU_2,HMMPfam_Homeobox,HMMSmart_SM00389,superfamily_Homeodomain-like,superfamily_lambda repressor-like DNA-binding domains	-	no_errors
PTPRG	5793	genome.wustl.edu	37	3	61989043	61989043	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	3	61989043	61989043	G	C	SNP	PTPRG	NM_002841.3	human	genbank	58_37c	+1	reviewed	missense	c.391	p.D131H	1.000	HMMPfam_Carb_anhydrase,superfamily_Carbonic anhydrase	HMMPfam_Y_phosphatase,HMMSmart_SM00194,HMMPfam_Carb_anhydrase,superfamily_Carbonic anhydrase,HMMSmart_SM00404,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,PatternScan_TYR_PHOSPHATASE_1,superfamily_(Phosphotyrosine protein) phosphatases II	-	no_errors
SLC4A5	57835	genome.wustl.edu	37	2	74454651	74454651	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	A	A	A	-	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	2	74454651	74454651	A	-	DEL	SLC4A5	NM_021196.3	human	genbank	58_37c	-1	reviewed	frame_shift_del	c.2957	p.L986fs	0.003	HMMPfam_HCO3_cotransp	HMMPfam_HCO3_cotransp,HMMPfam_Band_3_cyto,superfamily_Phoshotransferase/anion transport protein	-	no_errors
SLIT1	6585	genome.wustl.edu	37	10	98807512	98807512	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	10	98807512	98807512	C	T	SNP	SLIT1	NM_003061.2	human	genbank	58_37c	-1	validated	silent	c.1569	p.V523	1.000	HMMPfam_LRRNT,HMMSmart_SM00013,superfamily_L domain-like	PatternScan_ASX_HYDROXYL,HMMPfam_LRRNT,HMMSmart_SM00013,HMMPfam_LRRCT,HMMSmart_SM00082,HMMPfam_LRR_1,HMMSmart_SM00282,HMMSmart_SM00179,HMMSmart_SM00369,HMMSmart_SM00274,HMMSmart_SM00041,PatternScan_CTCK_1,HMMPfam_EGF,HMMSmart_SM00181,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_2,PatternScan_EGF_1,PatternScan_EGF_2,PatternScan_EGF_CA,HMMSmart_SM00365,superfamily_L domain-like,superfamily_EGF/Laminin	-	no_errors
STXBP2	6813	genome.wustl.edu	37	19	7711185	7711185	+	Silent	SNP	C	C	G	novel	unknown	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	19	7711185	7711185	C	G	SNP	STXBP2	NM_006949.2	human	genbank	58_37c	+1	reviewed	silent	c.1407	p.T469	1.000	HMMPfam_Sec1,superfamily_Sec1/munc18-like (SM) proteins	HMMPfam_Sec1,superfamily_Sec1/munc18-like (SM) proteins	-	no_errors
SYN1	6853	genome.wustl.edu	37	X	47464683	47464683	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	X	47464683	47464683	G	T	SNP	SYN1	NM_006950.3	human	genbank	58_37c	-1	reviewed	missense	c.623	p.A208D	0.985	HMMPfam_Synapsin,superfamily_PreATP-grasp domain,superfamily_Glutathione synthetase ATP-binding domain-like	HMMPfam_Synapsin,HMMPfam_Synapsin_C,superfamily_PreATP-grasp domain,HMMPfam_Synapsin_N,PatternScan_SYNAPSIN_2,PatternScan_SYNAPSIN_1,superfamily_Glutathione synthetase ATP-binding domain-like	-	no_errors
TDRD10	126668	genome.wustl.edu	37	1	154516476	154516476	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	1	154516476	154516476	C	T	SNP	TDRD10	NM_001098475.1	human	genbank	58_37c	+1	validated	nonsense	c.541	p.R181*	0.311	NULL	HMMPfam_RRM_1,HMMSmart_SM00360,HMMPfam_TUDOR,superfamily_RNA-binding domain RBD,superfamily_Tudor/PWWP/MBT	-	no_errors
TGM1	7051	genome.wustl.edu	37	14	24728371	24728371	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	14	24728371	24728371	C	G	SNP	TGM1	NM_000359.2	human	genbank	58_37c	-1	reviewed	missense	c.1069	p.G357R	1.000	superfamily_SSF54001	HMMPfam_Transglut_N,HMMPfam_Transglut_core,HMMSmart_TGc,HMMPfam_Transglut_C,superfamily_Transglut_C,PatternScan_TRANSGLUTAMINASES,superfamily_Ig_E-set,superfamily_SSF54001	-	no_errors
TNR	7143	genome.wustl.edu	37	1	175372322	175372322	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	1	175372322	175372322	C	T	SNP	TNR	NM_003285.2	human	genbank	58_37c	-1	validated	silent	c.930	p.G310	0.455	HMMSmart_SM00181,HMMPfam_EGF_2,superfamily_EGF/Laminin	HMMPfam_Fibrinogen_C,HMMSmart_SM00186,superfamily_Fibrinogen C-terminal domain-like,HMMPfam_fn3,HMMSmart_SM00060,HMMSmart_SM00181,superfamily_Fibronectin type III,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF_2,superfamily_EGF/Laminin	-	no_errors
TP53	7157	genome.wustl.edu	37	17	7578203	7578203	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	17	7578203	7578203	C	T	SNP	TP53	NM_000546.4	human	genbank	58_37c	-1	reviewed	missense	c.646	p.V216M	1.000	superfamily_p53-like transcription factors,HMMPfam_P53	PatternScan_P53,superfamily_p53-like transcription factors,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain,HMMPfam_P53,HMMPfam_P53_TAD	-	no_errors
UBP1	7342	genome.wustl.edu	37	3	33434069	33434071	+	In_Frame_Del	DEL	AAT	AAT	-	novel	unknown	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	AAT	AAT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	3	33434069	33434071	AAT	-	DEL	UBP1	NM_001128161.1	human	genbank	58_37c	-1	validated	in_frame_del	c.1571_1569	p.L523in_frame_del	1.000:1.000:0.995	NULL	HMMPfam_CP2,superfamily_SAM/Pointed domain	-	no_errors
ULK2	9706	genome.wustl.edu	37	17	19700794	19700794	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	17	19700794	19700794	G	A	SNP	ULK2	NM_001142610.1	human	genbank	58_37c	-1	reviewed	missense	c.1724	p.P575L	1.000	NULL	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
WDR52	55779	genome.wustl.edu	37	3	113128161	113128161	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	3	113128161	113128161	C	G	SNP	WDR52	NM_018338.3	human	genbank	58_37c	-1	validated	missense	c.682	p.E228Q	0.965	HMMSmart_WD40,superfamily_WD40_like	HMMSmart_WD40,superfamily_WD40_like,PatternScan_WD_REPEATS_1,HMMPfam_WD40	-	no_errors
ZBTB17	7709	genome.wustl.edu	37	1	16272281	16272281	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	A	A	A	C	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	1	16272281	16272281	A	C	SNP	ZBTB17	NM_003443.2	human	genbank	58_37c	-1	validated	missense	c.590	p.L197R	0.999	NULL	HMMSmart_SM00225,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,superfamily_POZ domain,HMMPfam_BTB,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZNF48	197407	genome.wustl.edu	37	16	30410052	30410052	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	16	30410052	30410052	G	A	SNP	ZNF48	NM_152652.1	human	genbank	58_37c	+1	provisional	missense	c.1481	p.R494Q	0.968	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZNF713	349075	genome.wustl.edu	37	7	55990862	55990862	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AR-A0TV-01A-21D-A099-09	TCGA-AR-A0TV-10A-01D-A099-09	T	T	T	G	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	0ec80200-12fe-479c-8ea0-982a9995f55a	7df70a01-366a-48ed-992a-3959d56bddde	7	55990862	55990862	T	G	SNP	ZNF713	NM_182633.1	human	genbank	58_37c	+1	provisional	missense	c.56	p.L19R	1.000	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
