Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
CDC42BPG	55561	genome.wustl.edu	37	11	64591956	64591956	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AR-A1AT-01A-11D-A12Q-09	TCGA-AR-A1AT-10A-01D-A12Q-09	T	T	T	G	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	7e00d4fa-b951-44d8-8fbf-fc7b9f19772e	f4c41f30-2984-49b6-87a7-e27893a7fc71	11	64591956	64591956	T	G	SNP	CDC42BPG	NM_017525.2	human	genbank	58_37c	-1	validated	missense	c.4645	p.S1549R	0.754	NULL	HMMPfam_PBD,HMMSmart_SM00133,HMMPfam_CNH,HMMSmart_SM00036,HMMSmart_SM00219,HMMPfam_PH,HMMSmart_SM00233,HMMPfam_C1_1,HMMSmart_SM00109,PatternScan_ZF_DAG_PE_1,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),HMMPfam_DMPK_coil,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,HMMPfam_Pkinase_C,superfamily_PH domain-like,superfamily_Cysteine-rich domain	-	no_errors
DNTT	1791	genome.wustl.edu	37	10	98092128	98092128	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AR-A1AT-01A-11D-A12Q-09	TCGA-AR-A1AT-10A-01D-A12Q-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	7e00d4fa-b951-44d8-8fbf-fc7b9f19772e	f4c41f30-2984-49b6-87a7-e27893a7fc71	10	98092128	98092128	C	T	SNP	DNTT	NM_004088.3	human	genbank	58_37c	+1	reviewed	silent	c.1134	p.D378	0.984	HMMSmart_SM00483,HMMPfam_NTP_transf_2,superfamily_Nucleotidyltransferase	HMMPfam_BRCT,HMMSmart_SM00292,superfamily_BRCT domain,HMMSmart_SM00483,HMMPfam_NTP_transf_2,superfamily_DNA polymerase beta N-terminal domain-like,HMMPfam_DNA_pol_lambd_f,superfamily_DNA polymerase beta-like second domain,PatternScan_DNA_POLYMERASE_X,superfamily_Nucleotidyltransferase	-	no_errors
ENSG00000246566	0	genome.wustl.edu	37	6	109106982	109106982	+	RNA	SNP	A	A	G	novel	unknown	TCGA-AR-A1AT-01A-11D-A12Q-09	TCGA-AR-A1AT-10A-01D-A12Q-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	7e00d4fa-b951-44d8-8fbf-fc7b9f19772e	f4c41f30-2984-49b6-87a7-e27893a7fc71	6	109106982	109106982	A	G	SNP	ENSG00000219565	ENST00000407656	human	ensembl	58_37c	-1	known	5_prime_untranslated_region	c.-109106982	NULL	0.337	-	-	-	no_coding_region:pseudogene
EPS15	2060	genome.wustl.edu	37	1	51864825	51864825	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AR-A1AT-01A-11D-A12Q-09	TCGA-AR-A1AT-10A-01D-A12Q-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	7e00d4fa-b951-44d8-8fbf-fc7b9f19772e	f4c41f30-2984-49b6-87a7-e27893a7fc71	1	51864825	51864825	C	A	SNP	EPS15	NM_001981.2	human	genbank	58_37c	-1	reviewed	missense	c.1931	p.G644V	1.000	NULL	HMMSmart_SM00027,HMMSmart_SM00054,HMMSmart_SM00726,PatternScan_EF_HAND_1,superfamily_EF-hand	-	no_errors
FOXK1	221937	genome.wustl.edu	37	7	4780597	4780597	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A1AT-01A-11D-A12Q-09	TCGA-AR-A1AT-10A-01D-A12Q-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	7e00d4fa-b951-44d8-8fbf-fc7b9f19772e	f4c41f30-2984-49b6-87a7-e27893a7fc71	7	4780597	4780597	C	T	SNP	FOXK1	NM_001037165.1	human	genbank	58_37c	+1	validated	missense	c.689	p.P230L	1.000	NULL	"HMMPfam_FHA,HMMSmart_SM00240,HMMPfam_Fork_head,HMMSmart_SM00339,superfamily_SMAD/FHA domain,PatternScan_FORK_HEAD_1,PatternScan_FORK_HEAD_2,superfamily_""Winged helix"" DNA-binding domain"	-	no_errors
GOT1L1	137362	genome.wustl.edu	37	8	37792595	37792595	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AR-A1AT-01A-11D-A12Q-09	TCGA-AR-A1AT-10A-01D-A12Q-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	7e00d4fa-b951-44d8-8fbf-fc7b9f19772e	f4c41f30-2984-49b6-87a7-e27893a7fc71	8	37792595	37792595	G	A	SNP	GOT1L1	NM_152413.2	human	genbank	58_37c	-1	validated	silent	c.1068	p.L356	0.988	HMMPfam_Aminotran_1_2,superfamily_PLP-dependent transferases	HMMPfam_Aminotran_1_2,superfamily_PLP-dependent transferases	-	no_errors
KIAA1370	56204	genome.wustl.edu	37	15	52901580	52901580	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A1AT-01A-11D-A12Q-09	TCGA-AR-A1AT-10A-01D-A12Q-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	7e00d4fa-b951-44d8-8fbf-fc7b9f19772e	f4c41f30-2984-49b6-87a7-e27893a7fc71	15	52901580	52901580	G	C	SNP	KIAA1370	NM_019600.2	human	genbank	58_37c	-1	validated	missense	c.1531	p.H511D	0.000	NULL	NULL	-	no_errors
LBXCOR1	390598	genome.wustl.edu	37	15	68118648	68118648	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A1AT-01A-11D-A12Q-09	TCGA-AR-A1AT-10A-01D-A12Q-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	7e00d4fa-b951-44d8-8fbf-fc7b9f19772e	f4c41f30-2984-49b6-87a7-e27893a7fc71	15	68118648	68118648	G	A	SNP	LBXCOR1	NM_001031807.1	human	genbank	58_37c	+1	provisional	missense	c.455	p.R152H	1.000	HMMPfam_Ski_Sno,superfamily_Putativ_DNA_bind	HMMPfam_Ski_Sno,superfamily_Putativ_DNA_bind,superfamily_SAND_like,HMMPfam_c-SKI_SMAD_bind	-	no_errors
LOC644256	644256	genome.wustl.edu	37	17	44337047	44337047	+	RNA	SNP	G	G	A	rs1706740	unknown	TCGA-AR-A1AT-01A-11D-A12Q-09	TCGA-AR-A1AT-10A-01D-A12Q-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7e00d4fa-b951-44d8-8fbf-fc7b9f19772e	f4c41f30-2984-49b6-87a7-e27893a7fc71	17	44337047	44337047	G	A	SNP	LOC644256	XR_017527.2	human	genbank	58_37c	-1	model	rna	NULL	NULL	0.117	-	-	-	pseudogene
MAMDC2	256691	genome.wustl.edu	37	9	72727930	72727930	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AR-A1AT-01A-11D-A12Q-09	TCGA-AR-A1AT-10A-01D-A12Q-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	7e00d4fa-b951-44d8-8fbf-fc7b9f19772e	f4c41f30-2984-49b6-87a7-e27893a7fc71	9	72727930	72727930	T	C	SNP	MAMDC2	NM_153267.4	human	genbank	58_37c	+1	validated	silent	c.525	p.N175	0.943	HMMPfam_MAM,HMMSmart_SM00137	HMMPfam_MAM,HMMSmart_SM00137,PatternScan_MAM_1	-	no_errors
MAPK3	5595	genome.wustl.edu	37	16	30129736	30129736	+	Silent	SNP	G	G	A	rs142560490	unknown	TCGA-AR-A1AT-01A-11D-A12Q-09	TCGA-AR-A1AT-10A-01D-A12Q-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	7e00d4fa-b951-44d8-8fbf-fc7b9f19772e	f4c41f30-2984-49b6-87a7-e27893a7fc71	16	30129736	30129736	G	A	SNP	MAPK3	NM_002746.2	human	genbank	58_37c	-1	reviewed	silent	c.477	p.S159	0.033	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_MAPK,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_MAPK,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
MLL	4297	genome.wustl.edu	37	11	118354912	118354912	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AR-A1AT-01A-11D-A12Q-09	TCGA-AR-A1AT-10A-01D-A12Q-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	7e00d4fa-b951-44d8-8fbf-fc7b9f19772e	f4c41f30-2984-49b6-87a7-e27893a7fc71	11	118354912	118354912	G	A	SNP	MLL	NM_005933.2	human	genbank	58_37c	+1	validated	silent	c.4101	p.P1367	0.002	NULL	PatternScan_HMGI_Y,HMMPfam_SET,HMMSmart_SM00317,HMMSmart_SM00297,superfamily_Bromodomain,HMMSmart_SM00249,HMMPfam_zf-CXXC,HMMSmart_SM00508,HMMPfam_FYRN,HMMPfam_FYRC,superfamily_FYVE/PHD zinc finger,PatternScan_RECR,HMMPfam_AT_hook,PatternScan_EF_HAND_1,HMMSmart_SM00542,HMMSmart_SM00541,PatternScan_ZF_PHD_1,HMMPfam_PHD,superfamily_SET domain	-	no_errors
MUC16	94025	genome.wustl.edu	37	19	9085518	9085518	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AR-A1AT-01A-11D-A12Q-09	TCGA-AR-A1AT-10A-01D-A12Q-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	7e00d4fa-b951-44d8-8fbf-fc7b9f19772e	f4c41f30-2984-49b6-87a7-e27893a7fc71	19	9085518	9085518	A	G	SNP	MUC16	NM_024690.2	human	genbank	58_37c	-1	validated	silent	c.6297	p.S2099	0.099	NULL	HMMPfam_SEA,HMMSmart_SM00200,PatternScan_ATPASE_ALPHA_BETA,superfamily_SEA domain	-	no_errors
MYH9	4627	genome.wustl.edu	37	22	36695005	36695005	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AR-A1AT-01A-11D-A12Q-09	TCGA-AR-A1AT-10A-01D-A12Q-09	C	C	C	-	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	7e00d4fa-b951-44d8-8fbf-fc7b9f19772e	f4c41f30-2984-49b6-87a7-e27893a7fc71	22	36695005	36695005	C	-	DEL	MYH9	NM_002473.4	human	genbank	58_37c	-1	reviewed	frame_shift_del	c.3060	p.K1020fs	1.000	superfamily_Prefoldin	HMMPfam_IQ,HMMSmart_SM00015,HMMPfam_Myosin_head,HMMSmart_SM00242,HMMPfam_Myosin_tail_1,HMMPfam_Myosin_N,superfamily_Prefoldin,superfamily_Regulator of G-protein signaling RGS,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
PLCB2	5330	genome.wustl.edu	37	15	40590117	40590117	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A1AT-01A-11D-A12Q-09	TCGA-AR-A1AT-10A-01D-A12Q-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	7e00d4fa-b951-44d8-8fbf-fc7b9f19772e	f4c41f30-2984-49b6-87a7-e27893a7fc71	15	40590117	40590117	G	A	SNP	PLCB2	NM_004573.2	human	genbank	58_37c	-1	validated	missense	c.1199	p.P400L	0.868	HMMPfam_PI-PLC-X,HMMSmart_SM00148,superfamily_PLC-like phosphodiesterases	HMMPfam_C2,HMMSmart_SM00239,HMMPfam_PI-PLC-X,HMMSmart_SM00148,HMMPfam_PI-PLC-Y,HMMSmart_SM00149,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMPfam_PLC-beta_C,HMMPfam_efhand_like,superfamily_PLC-like phosphodiesterases,superfamily_EF-hand	-	no_errors
PUS7L	83448	genome.wustl.edu	37	12	44130339	44130339	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A1AT-01A-11D-A12Q-09	TCGA-AR-A1AT-10A-01D-A12Q-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	7e00d4fa-b951-44d8-8fbf-fc7b9f19772e	f4c41f30-2984-49b6-87a7-e27893a7fc71	12	44130339	44130339	G	A	SNP	PUS7L	NM_001098614.1	human	genbank	58_37c	-1	validated	missense	c.1570	p.H524Y	1.000	HMMPfam_TruD,superfamily_PsdUridine_synth_cat_dom	HMMPfam_TruD,superfamily_PsdUridine_synth_cat_dom,PatternScan_UPF0024	-	no_errors
RFPL1	5988	genome.wustl.edu	37	22	29837624	29837624	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A1AT-01A-11D-A12Q-09	TCGA-AR-A1AT-10A-01D-A12Q-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	7e00d4fa-b951-44d8-8fbf-fc7b9f19772e	f4c41f30-2984-49b6-87a7-e27893a7fc71	22	29837624	29837624	G	A	SNP	RFPL1	NM_021026.2	human	genbank	58_37c	+1	validated	missense	c.467	p.R156Q	0.000	HMMSmart_PRY	HMMSmart_RING,HMMPfam_SPRY,HMMSmart_PRY,PatternScan_ZF_RING_1,HMMSmart_SPRY,HMMPfam_zf-C3HC4,superfamily_SSF57850	-	no_errors
RUNX1	861	genome.wustl.edu	37	21	36259157	36259157	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AR-A1AT-01A-11D-A12Q-09	TCGA-AR-A1AT-10A-01D-A12Q-09	G	G	G	-	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	7e00d4fa-b951-44d8-8fbf-fc7b9f19772e	f4c41f30-2984-49b6-87a7-e27893a7fc71	21	36259157	36259157	G	-	DEL	RUNX1	NM_001754.4	human	genbank	58_37c	-1	reviewed	frame_shift_del	c.334	p.L112fs	1.000	superfamily_p53-like transcription factors,HMMPfam_Runt	superfamily_p53-like transcription factors,HMMPfam_Runt,HMMPfam_RunxI	-	no_errors
RXFP3	51289	genome.wustl.edu	37	5	33937522	33937522	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A1AT-01A-11D-A12Q-09	TCGA-AR-A1AT-10A-01D-A12Q-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	7e00d4fa-b951-44d8-8fbf-fc7b9f19772e	f4c41f30-2984-49b6-87a7-e27893a7fc71	5	33937522	33937522	C	T	SNP	RXFP3	NM_016568.3	human	genbank	58_37c	+1	validated	missense	c.677	p.A226V	0.013	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
SERPINA1	5265	genome.wustl.edu	37	14	94847276	94847276	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AR-A1AT-01A-11D-A12Q-09	TCGA-AR-A1AT-10A-01D-A12Q-09	T	T	T	-	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	7e00d4fa-b951-44d8-8fbf-fc7b9f19772e	f4c41f30-2984-49b6-87a7-e27893a7fc71	14	94847276	94847276	T	-	DEL	SERPINA1	NM_000295.4	human	genbank	58_37c	-1	reviewed	frame_shift_del	c.849	p.K283fs	0.004	HMMPfam_Serpin,HMMSmart_SM00093,superfamily_Serpins	HMMPfam_Serpin,HMMSmart_SM00093,PatternScan_SERPIN,superfamily_Serpins	-	no_errors
SNX16	64089	genome.wustl.edu	37	8	82751846	82751846	+	Splice_Site	DEL	C	C	-	novel	unknown	TCGA-AR-A1AT-01A-11D-A12Q-09	TCGA-AR-A1AT-10A-01D-A12Q-09	C	C	C	-	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	7e00d4fa-b951-44d8-8fbf-fc7b9f19772e	f4c41f30-2984-49b6-87a7-e27893a7fc71	8	82751846	82751846	C	-	DEL	SNX16	NM_022133.3	human	genbank	58_37c	-1	reviewed	splice_site_del	c.375+1	e1+1	1.000	-	-	-	no_errors
SPTY2D1	144108	genome.wustl.edu	37	11	18637556	18637556	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AR-A1AT-01A-11D-A12Q-09	TCGA-AR-A1AT-10A-01D-A12Q-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	7e00d4fa-b951-44d8-8fbf-fc7b9f19772e	f4c41f30-2984-49b6-87a7-e27893a7fc71	11	18637556	18637556	T	C	SNP	SPTY2D1	NM_194285.2	human	genbank	58_37c	-1	validated	missense	c.265	p.T89A	1.000	NULL	HMMPfam_SPT2,HMMSmart_SM00784	-	no_errors
STARD7	56910	genome.wustl.edu	37	2	96861224	96861224	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A1AT-01A-11D-A12Q-09	TCGA-AR-A1AT-10A-01D-A12Q-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	7e00d4fa-b951-44d8-8fbf-fc7b9f19772e	f4c41f30-2984-49b6-87a7-e27893a7fc71	2	96861224	96861224	C	G	SNP	STARD7	NM_020151.3	human	genbank	58_37c	-1	validated	missense	c.354	p.Q118H	0.039	NULL	HMMPfam_START,HMMSmart_START,superfamily_SSF55961	-	no_errors
TDRD9	122402	genome.wustl.edu	37	14	104492006	104492006	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A1AT-01A-11D-A12Q-09	TCGA-AR-A1AT-10A-01D-A12Q-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	7e00d4fa-b951-44d8-8fbf-fc7b9f19772e	f4c41f30-2984-49b6-87a7-e27893a7fc71	14	104492006	104492006	C	T	SNP	TDRD9	NM_153046.2	human	genbank	58_37c	+1	validated	missense	c.2824	p.P942S	0.864	HMMPfam_TUDOR,superfamily_Tudor/PWWP/MBT	HMMPfam_Helicase_C,HMMSmart_SM00490,HMMSmart_SM00333,HMMPfam_HA2,HMMPfam_TUDOR,HMMPfam_DEAD,HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases,superfamily_Tudor/PWWP/MBT	-	no_errors
TNRC6A	27327	genome.wustl.edu	37	16	24801088	24801088	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AR-A1AT-01A-11D-A12Q-09	TCGA-AR-A1AT-10A-01D-A12Q-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	7e00d4fa-b951-44d8-8fbf-fc7b9f19772e	f4c41f30-2984-49b6-87a7-e27893a7fc71	16	24801088	24801088	C	T	SNP	TNRC6A	NM_014494.2	human	genbank	58_37c	+1	reviewed	silent	c.1125	p.N375	1.000	NULL	PatternScan_TUBULIN_B_AUTOREG,HMMPfam_Ago_hook,superfamily_RNA-binding domain RBD	-	no_errors
TTN	7273	genome.wustl.edu	37	2	179592332	179592332	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A1AT-01A-11D-A12Q-09	TCGA-AR-A1AT-10A-01D-A12Q-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	7e00d4fa-b951-44d8-8fbf-fc7b9f19772e	f4c41f30-2984-49b6-87a7-e27893a7fc71	2	179592332	179592332	G	C	SNP	TTN	ENST00000356127	human	ensembl	58_37c	-1	known	missense	c.16241	p.T5414S	0.991	HMMSmart_SM00406,HMMSmart_SM00409,HMMPfam_I-set	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_IG_MHC,HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,HMMPfam_PPAK,PatternScan_PROTEIN_KINASE_TYR,HMMPfam_I-set,HMMPfam_ig,HMMPfam_Titin_Z,HMMPfam_Pkinase,PatternScan_FGGY_KINASES_1,PatternScan_PEROXIDASE_1	-	no_errors
ZNF239	8187	genome.wustl.edu	37	10	44052156	44052156	+	Missense_Mutation	SNP	G	G	A	rs113213479	unknown	TCGA-AR-A1AT-01A-11D-A12Q-09	TCGA-AR-A1AT-10A-01D-A12Q-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	7e00d4fa-b951-44d8-8fbf-fc7b9f19772e	f4c41f30-2984-49b6-87a7-e27893a7fc71	10	44052156	44052156	G	A	SNP	ZNF239	NM_001099282.1	human	genbank	58_37c	-1	validated	missense	c.1372	p.R458C	0.000	NULL	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
ZNF296	162979	genome.wustl.edu	37	19	45574978	45574978	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AR-A1AT-01A-11D-A12Q-09	TCGA-AR-A1AT-10A-01D-A12Q-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	7e00d4fa-b951-44d8-8fbf-fc7b9f19772e	f4c41f30-2984-49b6-87a7-e27893a7fc71	19	45574978	45574978	C	A	SNP	ZNF296	NM_145288.1	human	genbank	58_37c	-1	provisional	missense	c.1309	p.G437C	0.964	NULL	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
