Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ADPGK	83440	genome.wustl.edu	37	15	73048722	73048722	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-BH-A0HQ-01A-11W-A050-09	TCGA-BH-A0HQ-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f03af67f-3119-4ee4-a4b0-227d36f493ba	006ff264-ef7d-4021-a879-77080c0440cf	15	73048722	73048722	T	C	SNP	ADPGK	NM_031284.4	human	genbank	58_37c	-1	validated	missense	c.710	p.N237S	1.000	HMMPfam_ADP_PFK_GK,superfamily_SSF53613	HMMPfam_ADP_PFK_GK,superfamily_SSF53613	-	no_errors
AQP7	364	genome.wustl.edu	37	9	33387044	33387044	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-BH-A0HQ-01A-11W-A050-09	TCGA-BH-A0HQ-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f03af67f-3119-4ee4-a4b0-227d36f493ba	006ff264-ef7d-4021-a879-77080c0440cf	9	33387044	33387044	T	-	DEL	AQP7	NM_001170.1	human	genbank	58_37c	-1	reviewed	frame_shift_del	c.191	p.Y64fs	0.001	HMMPfam_MIP,superfamily_MIP	HMMPfam_MIP,PatternScan_MIP,superfamily_MIP	-	no_errors
C21orf99	149992	genome.wustl.edu	37	21	14424808	14424808	+	RNA	SNP	A	C	C	rs4116581	byCluster;byFrequency;by2Hit2Allele;byHapmap	TCGA-BH-A0HQ-01A-11W-A050-09	TCGA-BH-A0HQ-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f03af67f-3119-4ee4-a4b0-227d36f493ba	006ff264-ef7d-4021-a879-77080c0440cf	21	14424808	14424808	A	C	SNP	C21orf99	NR_026916.1	human	genbank	58_37c	+1	provisional	rna	NULL	NULL	0.004	-	-	-	pseudogene
CDH3	1001	genome.wustl.edu	37	16	68714903	68714903	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0HQ-01A-11W-A050-09	TCGA-BH-A0HQ-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f03af67f-3119-4ee4-a4b0-227d36f493ba	006ff264-ef7d-4021-a879-77080c0440cf	16	68714903	68714903	C	T	SNP	CDH3	NM_001793.4	human	genbank	58_37c	+1	reviewed	silent	c.900	p.A300	0.291	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like	HMMPfam_Cadherin_C,HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,superfamily_Cadherin-like	-	no_errors
COL11A2	1302	genome.wustl.edu	37	6	33147259	33147259	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0HQ-01A-11W-A050-09	TCGA-BH-A0HQ-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f03af67f-3119-4ee4-a4b0-227d36f493ba	006ff264-ef7d-4021-a879-77080c0440cf	6	33147259	33147259	C	T	SNP	COL11A2	NM_080680.2	human	genbank	58_37c	-1	reviewed	silent	c.1452	p.A484	0.007	NULL	HMMPfam_COLFI,HMMSmart_SM00038,HMMSmart_SM00282,HMMSmart_SM00210,HMMPfam_Collagen,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_2	-	no_errors
CTSB	1508	genome.wustl.edu	37	8	11703257	11703257	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HQ-01A-11W-A050-09	TCGA-BH-A0HQ-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f03af67f-3119-4ee4-a4b0-227d36f493ba	006ff264-ef7d-4021-a879-77080c0440cf	8	11703257	11703257	C	T	SNP	CTSB	NM_001908.3	human	genbank	58_37c	-1	reviewed	missense	c.835	p.A279T	1.000	PatternScan_THIOL_PROTEASE_HIS,HMMPfam_Peptidase_C1,HMMSmart_SM00645,superfamily_Cysteine proteinases	PatternScan_THIOL_PROTEASE_CYS,PatternScan_THIOL_PROTEASE_HIS,PatternScan_THIOL_PROTEASE_ASN,HMMPfam_Peptidase_C1,HMMSmart_SM00645,HMMPfam_Propeptide_C1,superfamily_Cysteine proteinases	-	no_errors
ENSG00000206833	0	genome.wustl.edu	37	16	57864527	57864527	+	RNA	SNP	T	T	C	rs192442126	by1000genomes	TCGA-BH-A0HQ-01A-11W-A050-09	TCGA-BH-A0HQ-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f03af67f-3119-4ee4-a4b0-227d36f493ba	006ff264-ef7d-4021-a879-77080c0440cf	16	57864527	57864527	T	C	SNP	ENSG00000206833	ENST00000384106	human	ensembl	58_37c	-1	novel	rna	NULL	NULL	0.003	-	-	-	no_errors
ENSG00000234905	0	genome.wustl.edu	37	1	149286469	149286469	+	Missense_Mutation	SNP	C	C	G	rs593071	byCluster;byFrequency;by2Hit2Allele	TCGA-BH-A0HQ-01A-11W-A050-09	TCGA-BH-A0HQ-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f03af67f-3119-4ee4-a4b0-227d36f493ba	006ff264-ef7d-4021-a879-77080c0440cf	1	149286469	149286469	C	G	SNP	LOC388692	NR_027002.1	human	genbank	58_37c	+1	predicted	rna	NULL	NULL	0.039	-	-	-	no_errors
ENSG00000247765	0	genome.wustl.edu	37	15	21941718	21941718	+	RNA	SNP	C	C	G	rs1568351	byCluster;byFrequency;by2Hit2Allele;byHapmap	TCGA-BH-A0HQ-01A-11W-A050-09	TCGA-BH-A0HQ-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f03af67f-3119-4ee4-a4b0-227d36f493ba	006ff264-ef7d-4021-a879-77080c0440cf	15	21941718	21941718	C	G	SNP	ENSG00000247765	ENST00000500487	human	ensembl	58_37c	-1	known	rna	NULL	NULL	0.008	-	-	-	no_errors
FER1L5	90342	genome.wustl.edu	37	2	97312826	97312826	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0HQ-01A-11W-A050-09	TCGA-BH-A0HQ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f03af67f-3119-4ee4-a4b0-227d36f493ba	006ff264-ef7d-4021-a879-77080c0440cf	2	97312826	97312826	G	A	SNP	FER1L5	NM_001113382.1	human	genbank	58_37c	+1	provisional	missense	c.164	p.R55H	0.000	HMMPfam_C2,HMMSmart_SM00239,superfamily_C2 domain (Calcium/lipid-binding domain CaLB)	HMMPfam_C2,HMMSmart_SM00239,HMMSmart_SM00693,HMMSmart_SM00694,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMPfam_FerB,HMMPfam_FerI	-	no_errors
HECW2	57520	genome.wustl.edu	37	2	197081794	197081794	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-BH-A0HQ-01A-11W-A050-09	TCGA-BH-A0HQ-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f03af67f-3119-4ee4-a4b0-227d36f493ba	006ff264-ef7d-4021-a879-77080c0440cf	2	197081794	197081794	T	C	SNP	HECW2	NM_020760.1	human	genbank	58_37c	-1	provisional	missense	c.4432	p.I1478V	1.000	HMMPfam_HECT,HMMSmart_SM00119,superfamily_Hect E3 ligase catalytic domain	HMMPfam_C2,HMMSmart_SM00239,HMMPfam_HECT,HMMSmart_SM00119,superfamily_Hect E3 ligase catalytic domain,HMMPfam_WW,HMMSmart_SM00456,PatternScan_WW_DOMAIN_1,superfamily_WW domain,superfamily_C2 domain (Calcium/lipid-binding domain CaLB)	-	no_errors
HIST1H3G	8355	genome.wustl.edu	37	6	26271388	26271388	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0HQ-01A-11W-A050-09	TCGA-BH-A0HQ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f03af67f-3119-4ee4-a4b0-227d36f493ba	006ff264-ef7d-4021-a879-77080c0440cf	6	26271388	26271388	G	A	SNP	HIST1H3G	NM_003534.2	human	genbank	58_37c	-1	reviewed	silent	c.225	p.I75	1.000	HMMSmart_SM00428,PatternScan_HISTONE_H3_2,HMMPfam_Histone,superfamily_Histone-fold	HMMSmart_SM00428,PatternScan_HISTONE_H3_1,PatternScan_HISTONE_H3_2,HMMPfam_Histone,superfamily_Histone-fold	-	no_errors
HTR3A	3359	genome.wustl.edu	37	11	113850001	113850001	+	Splice_Site	SNP	T	T	G	novel	unknown	TCGA-BH-A0HQ-01A-11W-A050-09	TCGA-BH-A0HQ-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f03af67f-3119-4ee4-a4b0-227d36f493ba	006ff264-ef7d-4021-a879-77080c0440cf	11	113850001	113850001	T	G	SNP	HTR3A	NM_213621.3	human	genbank	58_37c	+1	reviewed	splice_site	c.264+2	e3+2	1.000	-	-	-	no_errors
IQCG	84223	genome.wustl.edu	37	3	197670853	197670853	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0HQ-01A-11W-A050-09	TCGA-BH-A0HQ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f03af67f-3119-4ee4-a4b0-227d36f493ba	006ff264-ef7d-4021-a879-77080c0440cf	3	197670853	197670853	G	A	SNP	IQCG	NM_001134435.1	human	genbank	58_37c	-1	validated	silent	c.78	p.G26	0.000	NULL	HMMPfam_IQ	-	no_errors
KIAA0922	23240	genome.wustl.edu	37	4	154556719	154556719	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HQ-01A-11W-A050-09	TCGA-BH-A0HQ-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f03af67f-3119-4ee4-a4b0-227d36f493ba	006ff264-ef7d-4021-a879-77080c0440cf	4	154556719	154556719	C	T	SNP	KIAA0922	NM_015196.3	human	genbank	58_37c	+1	validated	missense	c.4550	p.S1517F	0.839	NULL	NULL	-	no_errors
KIF21B	23046	genome.wustl.edu	37	1	200958025	200958025	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HQ-01A-11W-A050-09	TCGA-BH-A0HQ-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f03af67f-3119-4ee4-a4b0-227d36f493ba	006ff264-ef7d-4021-a879-77080c0440cf	1	200958025	200958025	C	T	SNP	KIF21B	NM_017596.2	human	genbank	58_37c	-1	provisional	missense	c.3167	p.R1056Q	1.000	superfamily_Prefoldin,superfamily_WD40_like	HMMSmart_WD40,HMMPfam_Kinesin,HMMSmart_KISc,superfamily_Prefoldin,superfamily_WD40_like,PatternScan_WD_REPEATS_1,HMMPfam_WD40,PatternScan_KINESIN_MOTOR_DOMAIN1,superfamily_SSF52540	-	no_errors
LOC646762	646762	genome.wustl.edu	37	7	29687431	29687431	+	RNA	SNP	G	A	A	rs28573839	by1000genomes	TCGA-BH-A0HQ-01A-11W-A050-09	TCGA-BH-A0HQ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f03af67f-3119-4ee4-a4b0-227d36f493ba	006ff264-ef7d-4021-a879-77080c0440cf	7	29687431	29687431	G	A	SNP	LOC646762	NR_024278.1	human	genbank	58_37c	-1	predicted	rna	NULL	NULL	0.097	-	-	-	no_errors
MLL3	58508	genome.wustl.edu	37	7	151859396	151859396	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-BH-A0HQ-01A-11W-A050-09	TCGA-BH-A0HQ-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f03af67f-3119-4ee4-a4b0-227d36f493ba	006ff264-ef7d-4021-a879-77080c0440cf	7	151859396	151859396	C	-	DEL	MLL3	NM_170606.2	human	genbank	58_37c	-1	reviewed	frame_shift_del	c.11266	p.A3756fs	0.001	NULL	PatternScan_HMGI_Y,HMMPfam_HMG_box,HMMSmart_SM00398,HMMPfam_SET,HMMSmart_SM00317,HMMSmart_SM00184,HMMSmart_SM00249,HMMSmart_SM00508,HMMPfam_FYRN,HMMPfam_FYRC,superfamily_FYVE/PHD zinc finger,HMMPfam_AT_hook,HMMSmart_SM00542,HMMSmart_SM00541,PatternScan_ZF_PHD_1,HMMPfam_PHD,PatternScan_ATPASE_ALPHA_BETA,superfamily_SET domain	-	no_errors
MXRA5	25878	genome.wustl.edu	37	X	3238811	3238811	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0HQ-01A-11W-A050-09	TCGA-BH-A0HQ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f03af67f-3119-4ee4-a4b0-227d36f493ba	006ff264-ef7d-4021-a879-77080c0440cf	X	3238811	3238811	G	A	SNP	MXRA5	NM_015419.3	human	genbank	58_37c	-1	reviewed	missense	c.4915	p.P1639S	0.006	NULL	HMMSmart_SM00013,HMMSmart_SM00082,HMMPfam_LRR_1,HMMSmart_SM00369,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,HMMPfam_ig,superfamily_Immunoglobulin,superfamily_L domain-like	-	no_errors
MYB	4602	genome.wustl.edu	37	6	135511376	135511377	+	Frame_Shift_Ins	INS	-	-	CA	novel	unknown	TCGA-BH-A0HQ-01A-11W-A050-09	TCGA-BH-A0HQ-10A-01W-A055-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f03af67f-3119-4ee4-a4b0-227d36f493ba	006ff264-ef7d-4021-a879-77080c0440cf	6	135511376	135511377	-	CA	INS	MYB	NM_001130173.1	human	genbank	58_37c	+1	reviewed	frame_shift_ins	c.418_419	p.E141fs	1.000:1.000	superfamily_Homeodomain-like	HMMSmart_SM00717,superfamily_Homeodomain-like,HMMPfam_Wos2,HMMPfam_Myb_DNA-binding,HMMPfam_Cmyb_C	-	no_errors
NYNRIN	0	genome.wustl.edu	37	14	24884006	24884006	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0HQ-01A-11W-A050-09	TCGA-BH-A0HQ-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f03af67f-3119-4ee4-a4b0-227d36f493ba	006ff264-ef7d-4021-a879-77080c0440cf	14	24884006	24884006	C	T	SNP	NYNRIN	NM_025081.2	human	genbank	58_37c	+1	validated	silent	c.3051	p.D1017	0.000	NULL	superfamily_Ribonuclease H-like,superfamily_DNA/RNA polymerases	-	no_errors
PIWIL3	440822	genome.wustl.edu	37	22	25158460	25158460	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HQ-01A-11W-A050-09	TCGA-BH-A0HQ-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f03af67f-3119-4ee4-a4b0-227d36f493ba	006ff264-ef7d-4021-a879-77080c0440cf	22	25158460	25158460	C	T	SNP	PIWIL3	NM_001008496.2	human	genbank	58_37c	-1	validated	missense	c.7	p.G3S	0.736	NULL	HMMPfam_PAZ,HMMPfam_Piwi,superfamily_RNaseH_fold,superfamily_SSF101690	-	no_errors
RDH11	51109	genome.wustl.edu	37	14	68157923	68157923	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HQ-01A-11W-A050-09	TCGA-BH-A0HQ-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f03af67f-3119-4ee4-a4b0-227d36f493ba	006ff264-ef7d-4021-a879-77080c0440cf	14	68157923	68157923	C	T	SNP	RDH11	NM_016026.3	human	genbank	58_37c	-1	validated	missense	c.388	p.V130M	1.000	HMMPfam_adh_short,superfamily_NAD(P)-binding Rossmann-fold domains	HMMPfam_adh_short,superfamily_NAD(P)-binding Rossmann-fold domains	-	no_errors
RUNX1	861	genome.wustl.edu	37	21	36259138	36259139	+	Splice_Site	INS	-	-	C	novel	unknown	TCGA-BH-A0HQ-01A-11W-A050-09	TCGA-BH-A0HQ-10A-01W-A055-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f03af67f-3119-4ee4-a4b0-227d36f493ba	006ff264-ef7d-4021-a879-77080c0440cf	21	36259138	36259139	-	C	INS	RUNX1	NM_001754.4	human	genbank	58_37c	-1	reviewed	splice_site_ins	c.351+1_351+1	e3+1	1.000:1.000	-	-	-	no_errors
SFTA3	253970	genome.wustl.edu	37	14	36946266	36946266	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0HQ-01A-11W-A050-09	TCGA-BH-A0HQ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f03af67f-3119-4ee4-a4b0-227d36f493ba	006ff264-ef7d-4021-a879-77080c0440cf	14	36946266	36946266	G	A	SNP	SFTA3	NM_001101341.1	human	genbank	58_37c	-1	provisional	silent	c.171	p.V57	0.002	NULL	NULL	-	no_errors
SHCBP1	79801	genome.wustl.edu	37	16	46617506	46617506	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-BH-A0HQ-01A-11W-A050-09	TCGA-BH-A0HQ-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f03af67f-3119-4ee4-a4b0-227d36f493ba	006ff264-ef7d-4021-a879-77080c0440cf	16	46617506	46617506	T	G	SNP	SHCBP1	NM_024745.4	human	genbank	58_37c	-1	validated	missense	c.1615	p.N539H	1.000	HMMSmart_SM00710,superfamily_Pectin lyase-like	HMMSmart_SM00710,superfamily_Pectin lyase-like	-	no_errors
SNRNP40	9410	genome.wustl.edu	37	1	31769548	31769548	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0HQ-01A-11W-A050-09	TCGA-BH-A0HQ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f03af67f-3119-4ee4-a4b0-227d36f493ba	006ff264-ef7d-4021-a879-77080c0440cf	1	31769548	31769548	G	A	SNP	SNRNP40	NM_004814.2	human	genbank	58_37c	-1	reviewed	silent	c.51	p.V17	0.849	NULL	HMMSmart_SM00320,superfamily_WD40 repeat-like,PatternScan_WD_REPEATS_1,HMMPfam_WD40	-	no_errors
TBX3	6926	genome.wustl.edu	37	12	115118782	115118782	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0HQ-01A-11W-A050-09	TCGA-BH-A0HQ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f03af67f-3119-4ee4-a4b0-227d36f493ba	006ff264-ef7d-4021-a879-77080c0440cf	12	115118782	115118782	G	A	SNP	TBX3	NM_016569.3	human	genbank	58_37c	-1	reviewed	missense	c.559	p.H187Y	1.000	HMMPfam_T-box,HMMSmart_SM00425,superfamily_p53-like transcription factors,PatternScan_TBOX_2	HMMPfam_T-box,HMMSmart_SM00425,superfamily_p53-like transcription factors,PatternScan_TBOX_2,PatternScan_TBOX_1	-	no_errors
TMEM150A	129303	genome.wustl.edu	37	2	85826426	85826426	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HQ-01A-11W-A050-09	TCGA-BH-A0HQ-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f03af67f-3119-4ee4-a4b0-227d36f493ba	006ff264-ef7d-4021-a879-77080c0440cf	2	85826426	85826426	C	T	SNP	TMEM150A	NM_001031738.2	human	genbank	58_37c	-1	validated	missense	c.589	p.V197I	0.966	HMMPfam_Frag1	HMMPfam_Frag1	-	no_errors
TMEM90B	79953	genome.wustl.edu	37	20	24524055	24524055	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0HQ-01A-11W-A050-09	TCGA-BH-A0HQ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f03af67f-3119-4ee4-a4b0-227d36f493ba	006ff264-ef7d-4021-a879-77080c0440cf	20	24524055	24524055	G	A	SNP	TMEM90B	NM_024893.1	human	genbank	58_37c	+1	provisional	missense	c.322	p.A108T	0.000	NULL	HMMPfam_CD225	-	no_errors
TRIM14	9830	genome.wustl.edu	37	9	100862246	100862246	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0HQ-01A-11W-A050-09	TCGA-BH-A0HQ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f03af67f-3119-4ee4-a4b0-227d36f493ba	006ff264-ef7d-4021-a879-77080c0440cf	9	100862246	100862246	G	A	SNP	TRIM14	NM_014788.2	human	genbank	58_37c	-1	reviewed	silent	c.504	p.I168	0.005	NULL	HMMPfam_zf-B_box,HMMSmart_SM00336,HMMPfam_SPRY,HMMSmart_SM00589,HMMSmart_SM00449,superfamily_B-box zinc-binding domain	-	no_errors
UPF3B	65109	genome.wustl.edu	37	X	118971905	118971905	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0HQ-01A-11W-A050-09	TCGA-BH-A0HQ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f03af67f-3119-4ee4-a4b0-227d36f493ba	006ff264-ef7d-4021-a879-77080c0440cf	X	118971905	118971905	G	A	SNP	UPF3B	NM_080632.1	human	genbank	58_37c	-1	reviewed	missense	c.1117	p.R373C	0.892	NULL	HMMPfam_Smg4_UPF3,superfamily_RNA-binding domain RBD	-	no_errors
VCL	7414	genome.wustl.edu	37	10	75843202	75843202	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A0HQ-01A-11W-A050-09	TCGA-BH-A0HQ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f03af67f-3119-4ee4-a4b0-227d36f493ba	006ff264-ef7d-4021-a879-77080c0440cf	10	75843202	75843202	G	T	SNP	VCL	NM_014000.2	human	genbank	58_37c	+1	reviewed	missense	c.953	p.R318L	1.000	HMMPfam_Vinculin,superfamily_alpha-catenin/vinculin	PatternScan_VINCULIN_1,PatternScan_VINCULIN_2,HMMPfam_Vinculin,superfamily_alpha-catenin/vinculin	-	no_errors
ZFHX3	463	genome.wustl.edu	37	16	72830109	72830109	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0HQ-01A-11W-A050-09	TCGA-BH-A0HQ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f03af67f-3119-4ee4-a4b0-227d36f493ba	006ff264-ef7d-4021-a879-77080c0440cf	16	72830109	72830109	G	A	SNP	ZFHX3	NM_006885.3	human	genbank	58_37c	-1	reviewed	nonsense	c.6472	p.R2158*	1.000	HMMPfam_Homeobox,HMMSmart_SM00389,superfamily_Homeodomain-like	HMMPfam_Homeobox,HMMSmart_SM00389,HMMSmart_SM00451,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,superfamily_Homeodomain-like,HMMSmart_SM00355,PatternScan_HOMEOBOX_1,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
