Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ABCA3	0	genome.wustl.edu	37	16	2339579	2339579	+	Silent	SNP	G	G	T	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	16	2339579	2339579	G	T	SNP	ABCA3	NM_001089.2	human	genbank	58_37c	-1	reviewed	silent	c.2556	p.I852	1.000	NULL	HMMPfam_ABC_tran,HMMSmart_SM00382,PatternScan_ABC_TRANSPORTER_1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
ABI3BP	0	genome.wustl.edu	37	3	100471647	100471647	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	3	100471647	100471647	C	G	SNP	ABI3BP	NM_015429.3	human	genbank	58_37c	-1	validated	missense	c.2973	p.L991F	1.000	NULL	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III	-	no_errors
ABR	0	genome.wustl.edu	37	17	953383	953383	+	Silent	SNP	C	C	T	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	17	953383	953383	C	T	SNP	ABR	NM_021962.2	human	genbank	58_37c	-1	reviewed	silent	c.1698	p.R566	1.000	HMMPfam_C2,HMMSmart_SM00239,superfamily_C2 domain (Calcium/lipid-binding domain CaLB)	HMMPfam_C2,HMMSmart_SM00239,HMMPfam_RhoGAP,HMMSmart_SM00324,HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_DBL homology domain (DH-domain),PatternScan_DH_1,HMMPfam_PH,HMMSmart_SM00233,superfamily_GTPase activation domain GAP,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),superfamily_PH domain-like	-	no_errors
ACLY	0	genome.wustl.edu	37	17	40030139	40030139	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	17	40030139	40030139	C	G	SNP	ACLY	NM_001096.2	human	genbank	58_37c	-1	reviewed	missense	c.2567	p.G856A	1.000	superfamily_Citrate_synthase_core	HMMPfam_CoA_binding,PatternScan_SUCCINYL_COA_LIG_1,HMMPfam_Ligase_CoA,superfamily_NAD(P)-bd,superfamily_CoA_ligase,superfamily_Citrate_synthase_core,PatternScan_SUCCINYL_COA_LIG_2,PatternScan_SUCCINYL_COA_LIG_3,superfamily_SSF56059	-	no_errors
ACLY	0	genome.wustl.edu	37	17	40030212	40030212	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	17	40030212	40030212	C	G	SNP	ACLY	NM_001096.2	human	genbank	58_37c	-1	reviewed	missense	c.2494	p.G832R	1.000	superfamily_Citrate_synthase_core	HMMPfam_CoA_binding,PatternScan_SUCCINYL_COA_LIG_1,HMMPfam_Ligase_CoA,superfamily_NAD(P)-bd,superfamily_CoA_ligase,superfamily_Citrate_synthase_core,PatternScan_SUCCINYL_COA_LIG_2,PatternScan_SUCCINYL_COA_LIG_3,superfamily_SSF56059	-	no_errors
ACSBG2	0	genome.wustl.edu	37	19	6183146	6183146	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	19	6183146	6183146	C	G	SNP	ACSBG2	NM_030924.3	human	genbank	58_37c	+1	validated	missense	c.1185	p.I395M	0.955	HMMPfam_AMP-binding,superfamily_SSF56801	HMMPfam_AMP-binding,PatternScan_AMP_BINDING,superfamily_SSF56801	-	no_errors
ADAMTSL4	0	genome.wustl.edu	37	1	150525701	150525701	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	1	150525701	150525701	G	A	SNP	ADAMTSL4	NM_019032.4	human	genbank	58_37c	+1	reviewed	missense	c.406	p.E136K	0.455	NULL	HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat,HMMPfam_ADAM_spacer1,HMMPfam_PLAC	-	no_errors
ADCY10	0	genome.wustl.edu	37	1	167865858	167865858	+	Silent	SNP	A	A	G	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	1	167865858	167865858	A	G	SNP	ADCY10	NM_018417.4	human	genbank	58_37c	-1	reviewed	silent	c.714	p.H238	0.720	NULL	HMMPfam_Guanylate_cyc,superfamily_Adenylyl and guanylyl cyclase catalytic domain,superfamily_TPR-like	-	no_errors
ADORA2A	0	genome.wustl.edu	37	22	24837096	24837096	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	22	24837096	24837096	G	C	SNP	ADORA2A	NM_000675.4	human	genbank	58_37c	+1	reviewed	missense	c.878	p.R293P	0.999	superfamily_Family A G protein-coupled receptor-like	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
AGAP5	0	genome.wustl.edu	37	10	75435124	75435124	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	10	75435124	75435124	C	G	SNP	AGAP5	NM_001144000.1	human	genbank	58_37c	-1	validated	missense	c.1294	p.D432H	1.000	HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like	HMMPfam_ArfGap,HMMSmart_SM00105,superfamily_Pyk2-associated protein beta ARF-GAP domain,HMMPfam_PH,HMMSmart_SM00233,HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat,superfamily_PH domain-like	-	no_errors
ALAS2	0	genome.wustl.edu	37	X	55046843	55046843	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	X	55046843	55046843	C	T	SNP	ALAS2	NM_000032.4	human	genbank	58_37c	-1	reviewed	missense	c.733	p.E245K	0.999	HMMPfam_Aminotran_1_2,superfamily_PLP-dependent transferases	PatternScan_AA_TRANSFER_CLASS_2,HMMPfam_Aminotran_1_2,HMMPfam_Preseq_ALAS,superfamily_PLP-dependent transferases	-	no_errors
ANKRD29	0	genome.wustl.edu	37	18	21197771	21197771	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	18	21197771	21197771	C	G	SNP	ANKRD29	NM_173505.2	human	genbank	58_37c	-1	validated	missense	c.648	p.L216F	0.993	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat	-	no_errors
ANKS1A	0	genome.wustl.edu	37	6	35051198	35051198	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	6	35051198	35051198	C	G	SNP	ANKS1A	NM_015245.2	human	genbank	58_37c	+1	validated	missense	c.2912	p.S971C	1.000	HMMPfam_PID,HMMSmart_PTB,superfamily_SSF50729	HMMPfam_SAM_1,HMMSmart_SAM,HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK,HMMPfam_PID,HMMSmart_PTB,superfamily_SAM_homology,superfamily_SSF50729	-	no_errors
ANO1	0	genome.wustl.edu	37	11	69950207	69950207	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	11	69950207	69950207	C	G	SNP	ANO1	NM_018043.5	human	genbank	58_37c	+1	validated	missense	c.643	p.Q215E	1.000	NULL	HMMPfam_DUF590	-	no_errors
ASH1L	0	genome.wustl.edu	37	1	155450828	155450828	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	1	155450828	155450828	C	G	SNP	ASH1L	NM_018489.2	human	genbank	58_37c	-1	reviewed	missense	c.1833	p.L611F	1.000	NULL	HMMPfam_BAH,HMMSmart_SM00439,HMMPfam_SET,HMMSmart_SM00317,HMMPfam_Bromodomain,HMMSmart_SM00297,superfamily_Bromodomain,HMMSmart_SM00249,HMMSmart_SM00570,superfamily_FYVE/PHD zinc finger,HMMPfam_AT_hook,HMMSmart_SM00384,PatternScan_ZF_PHD_1,HMMPfam_PHD,superfamily_SET domain	-	no_errors
ATP6V1A	0	genome.wustl.edu	37	3	113517105	113517105	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	3	113517105	113517105	G	C	SNP	ATP6V1A	NM_001690.2	human	genbank	58_37c	+1	reviewed	missense	c.1306	p.D436H	1.000	HMMPfam_ATP-synt_ab,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_ATP-synt_ab,HMMPfam_ATP-synt_ab_C,superfamily_C-terminal domain of alpha and beta subunits of F1 ATP synthase,HMMPfam_ATP-synt_ab_N,superfamily_N-terminal domain of alpha and beta subunits of F1 ATP synthase,PatternScan_ATPASE_ALPHA_BETA,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
BRD8	0	genome.wustl.edu	37	5	137481544	137481544	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	5	137481544	137481544	G	C	SNP	BRD8	NM_139199.1	human	genbank	58_37c	-1	reviewed	missense	c.3302	p.P1101R	1.000	HMMSmart_SM00297,superfamily_Bromodomain	HMMPfam_Bromodomain,HMMSmart_SM00297,superfamily_Bromodomain	-	no_errors
BTNL8	0	genome.wustl.edu	37	5	180335598	180335598	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	5	180335598	180335598	T	G	SNP	BTNL8	NM_001040462.2	human	genbank	58_37c	+1	validated	missense	c.62	p.V21G	0.867	HMMPfam_V-set,superfamily_Immunoglobulin	HMMSmart_SM00409,HMMPfam_SPRY,HMMSmart_SM00589,HMMPfam_V-set,HMMSmart_SM00449,superfamily_Immunoglobulin	-	no_errors
C22orf30	0	genome.wustl.edu	37	22	32109100	32109100	+	Silent	SNP	T	T	G	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	22	32109100	32109100	T	G	SNP	C22orf30	NM_173566.2	human	genbank	58_37c	-1	validated	silent	c.4725	p.R1575	0.000	NULL	NULL	-	no_errors
C2orf49	0	genome.wustl.edu	37	2	105954138	105954138	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	2	105954138	105954138	G	A	SNP	C2orf49	NM_024093.1	human	genbank	58_37c	+1	provisional	missense	c.94	p.E32K	1.000	NULL	NULL	-	no_errors
C7orf58	0	genome.wustl.edu	37	7	120655806	120655806	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	7	120655806	120655806	C	G	SNP	C7orf58	NM_024913.4	human	genbank	58_37c	+1	validated	missense	c.337	p.Q113E	0.000	NULL	NULL	-	no_errors
C7orf58	0	genome.wustl.edu	37	7	120767288	120767288	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	7	120767288	120767288	C	A	SNP	C7orf58	NM_024913.4	human	genbank	58_37c	+1	validated	missense	c.1279	p.L427I	0.602	NULL	NULL	-	no_errors
C9orf4	0	genome.wustl.edu	37	9	111903756	111903756	+	Silent	SNP	A	A	G	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	9	111903756	111903756	A	G	SNP	C9orf4	NM_014334.2	human	genbank	58_37c	-1	validated	silent	c.729	p.D243	0.977	HMMSmart_DoH,HMMPfam_DOMON	HMMSmart_DoH,HMMPfam_DOMON	-	no_errors
CARD11	0	genome.wustl.edu	37	7	2978400	2978400	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	7	2978400	2978400	C	G	SNP	CARD11	NM_032415.3	human	genbank	58_37c	-1	validated	missense	c.930	p.K310N	1.000	NULL	HMMPfam_CARD,HMMSmart_PDZ,superfamily_PDZ,superfamily_DEATH_like,PatternScan_GUANYLATE_KINASE_1,superfamily_SSF52540	-	no_errors
CASR	0	genome.wustl.edu	37	3	121975971	121975992	+	Frame_Shift_Del	DEL	GCCATAGAGGAGATAAACAGCA	GCCATAGAGGAGATAAACAGCA	-	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	GCCATAGAGGAGATAAACAGCA	GCCATAGAGGAGATAAACAGCA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	3	121975971	121975992	GCCATAGAGGAGATAAACAGCA	-	DEL	CASR	NM_000388.3	human	genbank	58_37c	+1	reviewed	frame_shift_del	c.229_250	p.I78fs	1.000:1.000:1.000:1.000:1.000:0.962:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000	HMMPfam_ANF_receptor,superfamily_Periplasmic binding protein-like I	HMMPfam_ANF_receptor,HMMPfam_NCD3G,HMMPfam_7tm_3,PatternScan_G_PROTEIN_RECEP_F3_1,PatternScan_G_PROTEIN_RECEP_F3_2,PatternScan_G_PROTEIN_RECEP_F3_3,superfamily_Periplasmic binding protein-like I	-	no_errors
CCNA1	0	genome.wustl.edu	37	13	37011769	37011777	+	In_Frame_Del	DEL	ATCACAAGA	ATCACAAGA	-	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	ATCACAAGA	ATCACAAGA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	13	37011769	37011777	ATCACAAGA	-	DEL	CCNA1	NM_003914.3	human	genbank	58_37c	+1	reviewed	in_frame_del	c.301_309	p.TRI102in_frame_del	0.002:0.004:0.004:0.001:0.003:0.000:0.000:0.002:0.000	NULL	HMMPfam_Cyclin_C,HMMSmart_SM00385,HMMPfam_Cyclin_N,PatternScan_CYCLINS,superfamily_Cyclin-like	-	no_errors
CD4	0	genome.wustl.edu	37	12	6924157	6924166	+	Frame_Shift_Del	DEL	AGGTAAGGGA	AGGTAAGGGA	-	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	AGGTAAGGGA	AGGTAAGGGA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	12	6924157	6924166	AGGTAAGGGA	-	DEL	CD4	NM_000616.3	human	genbank	58_37c	+1	validated	frame_shift_del	c.606_607	p.A203fs	0.960:0.991	HMMPfam_C2-set,superfamily_Immunoglobulin	HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_C2-set,HMMPfam_ig,HMMPfam_CD4-extracel,superfamily_Immunoglobulin	-	no_errors
CELSR1	0	genome.wustl.edu	37	22	46761272	46761272	+	Missense_Mutation	SNP	C	C	T	rs143915949	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	22	46761272	46761272	C	T	SNP	CELSR1	NM_014246.1	human	genbank	58_37c	-1	reviewed	missense	c.8410	p.D2804N	1.000	NULL	PatternScan_ASX_HYDROXYL,HMMPfam_GPS,HMMSmart_SM00303,HMMPfam_7tm_2,HMMSmart_SM00282,HMMPfam_HRM,HMMSmart_SM00008,HMMSmart_SM00179,HMMPfam_Laminin_EGF,HMMSmart_SM00180,PatternScan_EGF_LAM_1,HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_EGF,HMMSmart_SM00181,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_2,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_Cadherin-like,superfamily_EGF/Laminin	-	no_errors
CHD4	0	genome.wustl.edu	37	12	6710551	6710551	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	12	6710551	6710551	C	G	SNP	CHD4	NM_001273.2	human	genbank	58_37c	-1	reviewed	missense	c.703	p.A235P	1.000	NULL	HMMPfam_SNF2_N,HMMPfam_Chromo,HMMSmart_SM00298,PatternScan_CHROMO_1,HMMPfam_Helicase_C,HMMSmart_SM00490,HMMSmart_SM00249,PatternScan_DEAH_ATP_HELICASE,HMMPfam_DUF1086,HMMPfam_DUF1087,superfamily_FYVE/PHD zinc finger,HMMPfam_CHDCT2,HMMPfam_CHDNT,HMMSmart_SM00487,superfamily_Chromo domain-like,PatternScan_ZF_PHD_1,HMMPfam_PHD,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
CHD4	0	genome.wustl.edu	37	12	6711295	6711295	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	12	6711295	6711295	G	T	SNP	CHD4	NM_001273.2	human	genbank	58_37c	-1	reviewed	missense	c.269	p.P90Q	0.891	NULL	HMMPfam_SNF2_N,HMMPfam_Chromo,HMMSmart_SM00298,PatternScan_CHROMO_1,HMMPfam_Helicase_C,HMMSmart_SM00490,HMMSmart_SM00249,PatternScan_DEAH_ATP_HELICASE,HMMPfam_DUF1086,HMMPfam_DUF1087,superfamily_FYVE/PHD zinc finger,HMMPfam_CHDCT2,HMMPfam_CHDNT,HMMSmart_SM00487,superfamily_Chromo domain-like,PatternScan_ZF_PHD_1,HMMPfam_PHD,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
CLDN22	0	genome.wustl.edu	37	4	184240911	184240911	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	4	184240911	184240911	G	T	SNP	CLDN22	NM_001111319.1	human	genbank	58_37c	-1	provisional	missense	c.461	p.P154Q	1.000	HMMPfam_PMP22_Claudin	HMMPfam_PMP22_Claudin,PatternScan_CLAUDIN	-	no_errors
CLPX	0	genome.wustl.edu	37	15	65471352	65471352	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	15	65471352	65471352	G	C	SNP	CLPX	NM_006660.3	human	genbank	58_37c	-1	provisional	missense	c.278	p.S93C	1.000	NULL	HMMSmart_SM00382,HMMPfam_AAA_2,HMMPfam_ClpB_D2-small,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
CNGA2	0	genome.wustl.edu	37	X	150911600	150911600	+	Nonsense_Mutation	SNP	A	A	T	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	X	150911600	150911600	A	T	SNP	CNGA2	NM_005140.1	human	genbank	58_37c	+1	reviewed	nonsense	c.625	p.K209*	1.000	HMMPfam_Ion_trans,superfamily_SSF81324	HMMPfam_cNMP_binding,HMMSmart_cNMP,HMMPfam_Ion_trans,PatternScan_CNMP_BINDING_1,PatternScan_CNMP_BINDING_2,superfamily_cNMP_binding,superfamily_SSF81324	-	no_errors
COL5A1	0	genome.wustl.edu	37	9	137687118	137687118	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	9	137687118	137687118	G	C	SNP	COL5A1	NM_000093.3	human	genbank	58_37c	+1	reviewed	missense	c.2756	p.G919A	1.000	HMMPfam_Collagen	HMMPfam_COLFI,HMMSmart_COLFI,HMMSmart_LamG,HMMSmart_TSPN,HMMPfam_Collagen,superfamily_ConA_like_lec_gl,HMMPfam_Laminin_G_2	-	no_errors
COPG	0	genome.wustl.edu	37	3	128973842	128973842	+	Silent	SNP	G	G	A	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	3	128973842	128973842	G	A	SNP	COPG	NM_016128.3	human	genbank	58_37c	+1	validated	silent	c.414	p.Q138	1.000	HMMPfam_Adaptin_N,superfamily_ARM repeat	HMMPfam_Adaptin_N,superfamily_Subdomain of clathrin and coatomer appendage domain,superfamily_Clathrin adaptor appendage domain,HMMPfam_Gamma-COP,superfamily_ARM repeat	-	no_errors
CRY2	0	genome.wustl.edu	37	11	45891248	45891248	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	11	45891248	45891248	G	C	SNP	CRY2	NM_021117.3	human	genbank	58_37c	+1	validated	missense	c.1137	p.W379C	1.000	HMMPfam_FAD_binding_7,superfamily_Photolyase_FAD-bd/Cryptochr_C	HMMPfam_FAD_binding_7,superfamily_Photolyase_FAD-bd/Cryptochr_C,HMMPfam_DNA_photolyase,superfamily_DNA_photolyase_N	-	no_errors
CTPS2	0	genome.wustl.edu	37	X	16720990	16720990	+	Silent	SNP	T	T	G	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	X	16720990	16720990	T	G	SNP	CTPS2	NM_001144002.1	human	genbank	58_37c	-1	reviewed	silent	c.36	p.S12	0.075	HMMPfam_CTP_synth_N,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_GATase,HMMPfam_CTP_synth_N,superfamily_Class I glutamine amidotransferase-like,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
DENND4C	0	genome.wustl.edu	37	9	19346465	19346465	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	9	19346465	19346465	G	C	SNP	DENND4C	NM_017925.4	human	genbank	58_37c	+1	provisional	missense	c.2843	p.S948T	0.976	NULL	HMMPfam_DENN,HMMSmart_SM00799,HMMPfam_PPR,HMMPfam_dDENN,HMMSmart_SM00801	-	no_errors
DGKD	0	genome.wustl.edu	37	2	234357967	234357967	+	Silent	SNP	G	G	A	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	2	234357967	234357967	G	A	SNP	DGKD	NM_152879.2	human	genbank	58_37c	+1	reviewed	silent	c.1833	p.L611	0.998	NULL	HMMPfam_DAGK_acc,HMMSmart_SM00045,HMMPfam_DAGK_cat,HMMSmart_SM00046,HMMSmart_SM00454,HMMPfam_PH,HMMSmart_SM00233,HMMPfam_C1_1,HMMSmart_SM00109,PatternScan_ZF_DAG_PE_1,superfamily_SAM/Pointed domain,HMMPfam_SAM_2,superfamily_PH domain-like,superfamily_Cysteine-rich domain	-	no_errors
DMBT1	0	genome.wustl.edu	37	10	124389917	124389917	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	10	124389917	124389917	C	G	SNP	DMBT1	NM_007329.2	human	genbank	58_37c	+1	reviewed	missense	c.5549	p.S1850C	0.704	HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain	HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain,HMMPfam_SRCR,PatternScan_SRCR_1,HMMPfam_Zona_pellucida,HMMSmart_SM00241,HMMSmart_SM00202,superfamily_SRCR-like,PatternScan_ZP_1	-	no_errors
DNMT3B	0	genome.wustl.edu	37	20	31374344	31374344	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	20	31374344	31374344	G	A	SNP	DNMT3B	NM_006892.3	human	genbank	58_37c	+1	reviewed	missense	c.343	p.E115K	0.995	NULL	HMMPfam_PWWP,HMMSmart_SM00293,HMMPfam_DNA_methylase,superfamily_FYVE/PHD zinc finger,PatternScan_C5_MTASE_1,superfamily_S-adenosyl-L-methionine-dependent methyltransferases,superfamily_Tudor/PWWP/MBT	-	no_errors
DNTTIP2	0	genome.wustl.edu	37	1	94343060	94343060	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	1	94343060	94343060	T	A	SNP	DNTTIP2	NM_014597.3	human	genbank	58_37c	-1	provisional	missense	c.431	p.E144V	1.000	NULL	HMMPfam_Fcf2	-	no_errors
EFCAB3	0	genome.wustl.edu	37	17	60484535	60484535	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	17	60484535	60484535	G	C	SNP	EFCAB3	NM_001144933.1	human	genbank	58_37c	+1	validated	missense	c.985	p.E329Q	1.000	NULL	PatternScan_EF_HAND_1,superfamily_EF-hand	-	no_errors
EFEMP1	0	genome.wustl.edu	37	2	56145044	56145044	+	Splice_Site	SNP	T	T	G	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	2	56145044	56145044	T	G	SNP	EFEMP1	ENST00000405693	human	ensembl	58_37c	-1	known	splice_site	c.271+2	e3+2	0.000	-	-	-	no_errors
ENSG00000205536	0	genome.wustl.edu	37	16	21893238	21893238	+	Missense_Mutation	SNP	T	T	C	rs78541562	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	16	21893238	21893238	T	C	SNP	ENSG00000205536	ENST00000380598	human	ensembl	58_37c	-1	known	missense	c.1144	p.K382E	1.000	NULL	NULL	-	no_stop_codon
ENSG00000223900	0	genome.wustl.edu	37	10	51592391	51592391	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	10	51592391	51592391	C	G	SNP	ENSG00000223900	ENST00000428327	human	ensembl	58_37c	+1	known	missense	c.109	p.L37V	0.000	NULL	NULL	-	no_errors
ENSG00000225587	0	genome.wustl.edu	37	15	102299942	102299942	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	15	102299942	102299942	G	A	SNP	ENSG00000225587	ENST00000416250	human	ensembl	58_37c	+1	known	missense	c.10	p.V4I	1.000	NULL	NULL	-	no_start_codon:no_stop_codon
ENSG00000236623	0	genome.wustl.edu	37	10	42391422	42391422	+	RNA	SNP	A	A	G	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	10	42391422	42391422	A	G	SNP	ENSG00000236623	ENST00000423802	human	ensembl	58_37c	-1	novel	rna	NULL	NULL	0.000	-	-	-	no_errors
EP300	0	genome.wustl.edu	37	22	41566475	41566475	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	22	41566475	41566475	A	C	SNP	EP300	NM_001429.3	human	genbank	58_37c	+1	reviewed	missense	c.4352	p.H1451P	1.000	HMMPfam_DUF906	HMMPfam_zf-TAZ,HMMSmart_ZnF_TAZ,superfamily_TAZ_finger,HMMPfam_ZZ,HMMSmart_ZnF_ZZ,PatternScan_ZF_ZZ_1,HMMPfam_Bromodomain,HMMSmart_BROMO,superfamily_Bromodomain,HMMPfam_KIX,superfamily_KIX,superfamily_Nuc_recept_coact,HMMPfam_DUF906,HMMPfam_DUF902,HMMPfam_Creb_binding,PatternScan_BROMODOMAIN_1	-	no_errors
FAM171B	0	genome.wustl.edu	37	2	187559047	187559048	+	In_Frame_Ins	INS	-	-	CAA	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	2	187559047	187559048	-	CAA	INS	FAM171B	NM_177454.3	human	genbank	58_37c	+1	validated	in_frame_ins	c.147_148	p.53in_frame_insQ	0.634:0.592	NULL	HMMPfam_UPF0560	-	no_errors
FAM186B	0	genome.wustl.edu	37	12	49994357	49994357	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	12	49994357	49994357	C	G	SNP	FAM186B	NM_032130.2	human	genbank	58_37c	-1	validated	missense	c.1066	p.E356Q	0.154	NULL	NULL	-	no_errors
FAM22F	0	genome.wustl.edu	37	9	97082499	97082499	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	9	97082499	97082499	A	T	SNP	FAM22F	NM_017561.1	human	genbank	58_37c	-1	validated	missense	c.1359	p.F453L	0.033	NULL	NULL	-	no_errors
FANCI	0	genome.wustl.edu	37	15	89838218	89838218	+	Silent	SNP	G	G	C	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	15	89838218	89838218	G	C	SNP	FANCI	NM_001113378.1	human	genbank	58_37c	+1	reviewed	silent	c.2529	p.V843	0.926	NULL	NULL	-	no_errors
FBN2	0	genome.wustl.edu	37	5	127611744	127611744	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	5	127611744	127611744	C	A	SNP	FBN2	NM_001999.3	human	genbank	58_37c	-1	reviewed	missense	c.7580	p.G2527V	0.996	HMMSmart_SM00179,HMMSmart_SM00181,superfamily_Concanavalin A-like lectins/glucanases,superfamily_Growth factor receptor domain,PatternScan_EGF_2,HMMPfam_EGF_CA,superfamily_EGF/Laminin	PatternScan_ASX_HYDROXYL,HMMSmart_SM00179,HMMPfam_TB,superfamily_TB module/8-cys domain,HMMPfam_EGF,HMMSmart_SM00181,superfamily_Concanavalin A-like lectins/glucanases,superfamily_Growth factor receptor domain,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF_CA,PatternScan_EGF_CA,superfamily_EGF/Laminin	-	no_errors
FEM1A	0	genome.wustl.edu	37	19	4793084	4793084	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	19	4793084	4793084	C	G	SNP	FEM1A	NM_018708.2	human	genbank	58_37c	+1	validated	missense	c.1218	p.F406L	0.998	superfamily_ANK	HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK	-	no_errors
FRMD7	0	genome.wustl.edu	37	X	131212589	131212589	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	X	131212589	131212589	G	T	SNP	FRMD7	NM_194277.2	human	genbank	58_37c	-1	reviewed	missense	c.1456	p.Q486K	1.000	NULL	HMMPfam_FA,HMMPfam_FERM_N,HMMPfam_FERM_C,PatternScan_FERM_1,PatternScan_FERM_2,HMMPfam_FERM_M,superfamily_FERM_3-hlx,HMMSmart_B41,superfamily_SSF50729,superfamily_SSF54236	-	no_errors
FRMPD1	0	genome.wustl.edu	37	9	37740228	37740228	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	9	37740228	37740228	T	A	SNP	FRMPD1	NM_014907.2	human	genbank	58_37c	+1	validated	missense	c.1703	p.V568E	0.008	NULL	HMMPfam_PDZ,HMMSmart_PDZ,superfamily_PDZ,PatternScan_FERM_1,PatternScan_FERM_2,HMMPfam_FERM_M,superfamily_FERM_3-hlx,HMMSmart_B41	-	no_errors
FTSJ3	0	genome.wustl.edu	37	17	61898796	61898796	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	17	61898796	61898796	C	G	SNP	FTSJ3	NM_017647.3	human	genbank	58_37c	-1	reviewed	missense	c.1804	p.E602Q	0.001	NULL	HMMPfam_FtsJ,HMMPfam_Spb1_C,superfamily_S-adenosyl-L-methionine-dependent methyltransferases	-	no_errors
FUT6	0	genome.wustl.edu	37	19	5832255	5832255	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	19	5832255	5832255	G	C	SNP	FUT6	NM_000150.2	human	genbank	58_37c	-1	reviewed	missense	c.324	p.H108Q	0.983	HMMPfam_Glyco_transf_10	HMMPfam_Glyco_transf_10	-	no_errors
GAB3	0	genome.wustl.edu	37	X	153924265	153924265	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	X	153924265	153924265	C	G	SNP	GAB3	NM_001081573.1	human	genbank	58_37c	-1	reviewed	missense	c.1457	p.R486T	1.000	NULL	HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like	-	no_errors
GBP4	0	genome.wustl.edu	37	1	89658731	89658731	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	1	89658731	89658731	C	G	SNP	GBP4	NM_052941.4	human	genbank	58_37c	-1	validated	missense	c.526	p.D176H	0.005	HMMPfam_GBP,superfamily_SSF52540	HMMPfam_GBP_C,HMMPfam_GBP,superfamily_GBP,superfamily_SSF52540	-	no_errors
GDI1	0	genome.wustl.edu	37	X	153668821	153668821	+	Silent	SNP	C	C	T	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	X	153668821	153668821	C	T	SNP	GDI1	NM_001493.2	human	genbank	58_37c	+1	reviewed	silent	c.687	p.Y229	0.988	HMMPfam_GDI,superfamily_FAD/NAD(P)-binding domain	HMMPfam_GDI,superfamily_FAD/NAD(P)-binding domain	-	no_errors
GOLGB1	0	genome.wustl.edu	37	3	121409716	121409716	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	3	121409716	121409716	G	A	SNP	GOLGB1	NM_004487.3	human	genbank	58_37c	-1	validated	missense	c.8480	p.S2827F	0.992	superfamily_Prefoldin	HMMSmart_SM00340,superfamily_Prefoldin,superfamily_Spectrin repeat	-	no_errors
GRK7	0	genome.wustl.edu	37	3	141535617	141535617	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	3	141535617	141535617	G	C	SNP	GRK7	NM_139209.2	human	genbank	58_37c	+1	reviewed	missense	c.1387	p.E463Q	1.000	HMMSmart_S_TK_X,superfamily_Kinase_like	HMMPfam_RGS,HMMSmart_RGS,HMMSmart_S_TK_X,HMMSmart_S_TKc,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,superfamily_Regulat_G_prot_signal_superfam,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
GTF3C6	0	genome.wustl.edu	37	6	111280417	111280417	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	6	111280417	111280417	G	T	SNP	GTF3C6	NM_138408.3	human	genbank	58_37c	+1	validated	missense	c.100	p.D34Y	1.000	NULL	HMMPfam_TFIIIC_subunit	-	no_errors
HUWE1	0	genome.wustl.edu	37	X	53631744	53631744	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	X	53631744	53631744	A	C	SNP	HUWE1	NM_031407.4	human	genbank	58_37c	-1	reviewed	missense	c.2548	p.S850A	1.000	NULL	HMMPfam_UBA,HMMPfam_HECT,HMMSmart_SM00119,superfamily_Hect E3 ligase catalytic domain,HMMPfam_WWE,superfamily_UBA-like,HMMPfam_DUF908,HMMPfam_DUF913,HMMSmart_SM00165,superfamily_ARM repeat	-	no_errors
IGF2AS	0	genome.wustl.edu	37	11	2167538	2167538	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	11	2167538	2167538	C	T	SNP	IGF2AS	ENST00000381361	human	ensembl	58_37c	+1	known	missense	c.368	p.A123V	0.002	NULL	NULL	-	no_errors
IGSF10	0	genome.wustl.edu	37	3	151163081	151163081	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	3	151163081	151163081	G	C	SNP	IGSF10	NM_178822.4	human	genbank	58_37c	-1	validated	missense	c.4688	p.S1563C	0.310	NULL	HMMPfam_LRRNT,HMMSmart_SM00013,HMMSmart_SM00082,PatternScan_AA_TRNA_LIGASE_I,HMMPfam_LRR_1,HMMSmart_SM00369,HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,HMMPfam_V-set,HMMPfam_ig,superfamily_Immunoglobulin,superfamily_L domain-like	-	no_errors
IL1RAPL1	0	genome.wustl.edu	37	X	29417323	29417323	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	X	29417323	29417323	C	G	SNP	IL1RAPL1	NM_014271.3	human	genbank	58_37c	+1	reviewed	missense	c.601	p.L201V	0.790	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_ig,superfamily_Immunoglobulin	HMMPfam_TIR,HMMSmart_SM00255,superfamily_Toll/Interleukin receptor TIR domain,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_ig,superfamily_Immunoglobulin	-	no_errors
IL1RL2	0	genome.wustl.edu	37	2	102805699	102805699	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	2	102805699	102805699	C	G	SNP	IL1RL2	NM_003854.2	human	genbank	58_37c	+1	reviewed	missense	c.222	p.H74Q	1.000	HMMSmart_IG,HMMPfam_ig,superfamily_SSF48726	HMMPfam_TIR,HMMSmart_TIR,superfamily_TIR,HMMSmart_IG,HMMPfam_ig,superfamily_SSF48726	-	no_errors
INHBA	0	genome.wustl.edu	37	7	41729394	41729394	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	7	41729394	41729394	G	A	SNP	INHBA	NM_002192.2	human	genbank	58_37c	-1	reviewed	missense	c.1135	p.R379W	0.995	HMMPfam_TGF_beta,HMMSmart_SM00204,superfamily_Cystine-knot cytokines	HMMPfam_TGFb_propeptide,HMMPfam_TGF_beta,HMMSmart_SM00204,PatternScan_TGF_BETA_1,superfamily_Cystine-knot cytokines	-	no_errors
KBTBD3	0	genome.wustl.edu	37	11	105929688	105929688	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	11	105929688	105929688	C	G	SNP	KBTBD3	NM_152433.3	human	genbank	58_37c	-1	validated	missense	c.137	p.R46T	1.000	superfamily_POZ domain,HMMPfam_BTB	HMMSmart_SM00225,HMMPfam_Kelch_1,HMMSmart_SM00612,superfamily_Galactose oxidase central domain,superfamily_POZ domain,HMMPfam_BACK,HMMPfam_BTB	-	no_errors
KIAA1383	0	genome.wustl.edu	37	1	232940918	232940925	+	Frame_Shift_Del	DEL	CTCACTGT	CTCACTGT	-	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	CTCACTGT	CTCACTGT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	1	232940918	232940925	CTCACTGT	-	DEL	KIAA1383	NM_019090.2	human	genbank	58_37c	+1	validated	frame_shift_del	c.149_156	p.H51fs	0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.000	NULL	NULL	-	no_errors
KIAA1432	0	genome.wustl.edu	37	9	5763167	5763167	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	9	5763167	5763167	G	C	SNP	KIAA1432	NM_020829.2	human	genbank	58_37c	+1	validated	missense	c.1903	p.A635P	1.000	NULL	HMMPfam_RIC1,superfamily_Amine_DH_B_like	-	no_errors
KLHDC7A	0	genome.wustl.edu	37	1	18808277	18808277	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	1	18808277	18808277	G	C	SNP	KLHDC7A	NM_152375.2	human	genbank	58_37c	+1	validated	missense	c.802	p.V268L	0.419	NULL	HMMPfam_Kelch_1,HMMSmart_Kelch,superfamily_Gal_oxid_central	-	no_errors
LASS2	0	genome.wustl.edu	37	1	150940918	150940918	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	1	150940918	150940918	C	T	SNP	LASS2	NM_022075.3	human	genbank	58_37c	-1	reviewed	missense	c.244	p.A82T	1.000	superfamily_Homeodomain-like	HMMPfam_TRAM_LAG1_CLN8,HMMSmart_SM00724,superfamily_Homeodomain-like	-	no_errors
LOC100128086	0	genome.wustl.edu	37	9	109879379	109879379	+	RNA	SNP	G	G	C	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	9	109879379	109879379	G	C	SNP	LOC100128086	XR_039419.2	human	genbank	58_37c	+1	model	rna	NULL	NULL	1.000	-	-	-	pseudogene
LOC100132330	0	genome.wustl.edu	37	2	89111155	89111155	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	2	89111155	89111155	A	C	SNP	LOC100132330	XM_001719152.1	human	genbank	58_37c	-1	model	missense	c.385	p.Y129D	0.967	HMMPfam_MARVEL	HMMPfam_MARVEL	-	no_errors
LOC100132472	0	genome.wustl.edu	37	17	18997106	18997106	+	Missense_Mutation	SNP	G	G	T	rs4925018	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	17	18997106	18997106	G	T	SNP	LOC100132472	XM_001723179.1	human	genbank	58_37c	+1	model	missense	c.161	p.G54V	0.051	NULL	NULL	-	no_errors
LOC100289196	0	genome.wustl.edu	37	7	56671154	56671154	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	7	56671154	56671154	C	G	SNP	LOC100289196	XM_002342722.1	human	genbank	58_37c	+1	model	missense	c.52	p.L18V	1.000	NULL	NULL	-	no_errors
LOC441166	0	genome.wustl.edu	37	6	111180111	111180111	+	RNA	SNP	C	C	A	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	6	111180111	111180111	C	A	SNP	LOC441166	XR_016728.3	human	genbank	58_37c	+1	model	rna	NULL	NULL	0.998	-	-	-	no_errors
LOC644063	0	genome.wustl.edu	37	3	96068309	96068309	+	RNA	SNP	T	T	G	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	3	96068309	96068309	T	G	SNP	LOC644063	XR_016547.3	human	genbank	58_37c	+1	model	rna	NULL	NULL	0.042	-	-	-	pseudogene
LOC645181	0	genome.wustl.edu	37	5	84845576	84845576	+	RNA	SNP	G	G	C	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	5	84845576	84845576	G	C	SNP	LOC645181	XR_017382.3	human	genbank	58_37c	+1	model	rna	NULL	NULL	1.000	-	-	-	pseudogene
LOC729057	0	genome.wustl.edu	37	22	16123616	16123616	+	RNA	SNP	C	C	T	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	22	16123616	16123616	C	T	SNP	LOC729057	XR_042044.2	human	genbank	58_37c	+1	model	rna	NULL	NULL	0.992	-	-	-	no_errors
LOXL4	0	genome.wustl.edu	37	10	100017441	100017441	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	10	100017441	100017441	C	G	SNP	LOXL4	NM_032211.6	human	genbank	58_37c	-1	reviewed	missense	c.1226	p.R409T	1.000	HMMPfam_SRCR,HMMSmart_SM00202,superfamily_SRCR-like	HMMPfam_SRCR,PatternScan_SRCR_1,HMMPfam_Lysyl_oxidase,HMMSmart_SM00202,superfamily_SRCR-like,PatternScan_LYSYL_OXIDASE	-	no_errors
MAEA	0	genome.wustl.edu	37	4	1330721	1330721	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	4	1330721	1330721	C	T	SNP	MAEA	ENST00000382947	human	ensembl	58_37c	+1	known	missense	c.638	p.A213V	1.000	NULL	HMMSmart_SM00667,superfamily_RING/U-box	-	no_errors
MCM2	0	genome.wustl.edu	37	3	127327260	127327260	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	3	127327260	127327260	G	A	SNP	MCM2	ENST00000491422	human	ensembl	58_37c	+1	known	missense	c.725	p.R242K	1.000	HMMSmart_SM00350,superfamily_Nucleic acid-binding proteins	HMMPfam_MCM,HMMSmart_SM00350,superfamily_Nucleic acid-binding proteins,PatternScan_MCM_1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region
MCM3	0	genome.wustl.edu	37	6	52138116	52138116	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	6	52138116	52138116	C	G	SNP	MCM3	NM_002388.3	human	genbank	58_37c	-1	reviewed	missense	c.1588	p.D530H	1.000	HMMPfam_MCM,HMMSmart_MCM,superfamily_SSF52540	HMMPfam_MCM,HMMSmart_MCM,HMMSmart_AAA,superfamily_Nucleic_acid_OB,PatternScan_MCM_1,superfamily_SSF52540	-	no_errors
MEIS2	0	genome.wustl.edu	37	15	37390202	37390202	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	15	37390202	37390202	C	T	SNP	MEIS2	NM_170675.2	human	genbank	58_37c	-1	reviewed	missense	c.211	p.D71N	1.000	NULL	HMMPfam_Homeobox,HMMSmart_SM00389,superfamily_Homeodomain-like	-	no_errors
MLL	0	genome.wustl.edu	37	11	118344879	118344879	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	11	118344879	118344879	C	G	SNP	MLL	NM_005933.2	human	genbank	58_37c	+1	validated	missense	c.3005	p.S1002C	1.000	NULL	PatternScan_HMGI_Y,HMMPfam_SET,HMMSmart_SM00317,HMMSmart_SM00297,superfamily_Bromodomain,HMMSmart_SM00249,HMMPfam_zf-CXXC,HMMSmart_SM00508,HMMPfam_FYRN,HMMPfam_FYRC,superfamily_FYVE/PHD zinc finger,PatternScan_RECR,HMMPfam_AT_hook,PatternScan_EF_HAND_1,HMMSmart_SM00542,HMMSmart_SM00541,PatternScan_ZF_PHD_1,HMMPfam_PHD,superfamily_SET domain	-	no_errors
MORF4L1	0	genome.wustl.edu	37	15	79178563	79178563	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	15	79178563	79178563	C	G	SNP	MORF4L1	NM_206839.1	human	genbank	58_37c	+1	validated	missense	c.353	p.A118G	1.000	HMMPfam_MRG	HMMPfam_MRG	-	no_errors
MUC4	0	genome.wustl.edu	37	3	195511945	195511945	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	3	195511945	195511945	G	A	SNP	MUC4	NM_018406.5	human	genbank	58_37c	-1	reviewed	missense	c.6506	p.A2169V	0.424	NULL	HMMPfam_VWD,HMMSmart_SM00216,HMMPfam_NIDO,HMMSmart_SM00539,HMMPfam_AMOP,HMMSmart_SM00723,PatternScan_SUGAR_TRANSPORT_2,HMMSmart_SM00181,PatternScan_EGF_1,superfamily_EGF/Laminin	-	no_errors
MYBPC1	0	genome.wustl.edu	37	12	102056175	102056175	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	12	102056175	102056175	G	C	SNP	MYBPC1	NM_002465.2	human	genbank	58_37c	+1	validated	missense	c.2072	p.W691S	1.000	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,HMMPfam_I-set,superfamily_Immunoglobulin	-	no_errors
MYH13	0	genome.wustl.edu	37	17	10222306	10222306	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	17	10222306	10222306	C	T	SNP	MYH13	NM_003802.2	human	genbank	58_37c	-1	validated	missense	c.3539	p.R1180K	1.000	HMMPfam_Myosin_tail_1	HMMPfam_Myosin_head,HMMSmart_SM00242,HMMPfam_Myosin_tail_1,HMMPfam_Myosin_N,superfamily_Prefoldin,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
MYO7A	0	genome.wustl.edu	37	11	76903310	76903310	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	11	76903310	76903310	A	G	SNP	MYO7A	NM_000260.3	human	genbank	58_37c	+1	reviewed	missense	c.4139	p.Y1380C	1.000	superfamily_Second domain of FERM,HMMSmart_SM00295	HMMPfam_IQ,HMMSmart_SM00015,HMMPfam_MyTH4,HMMSmart_SM00139,HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain,HMMPfam_Myosin_head,HMMSmart_SM00242,HMMPfam_FERM_N,HMMPfam_FERM_M,superfamily_Second domain of FERM,HMMSmart_SM00295,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
MYST3	0	genome.wustl.edu	37	8	41790605	41790605	+	Silent	SNP	G	G	A	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	8	41790605	41790605	G	A	SNP	MYST3	NM_001099412.1	human	genbank	58_37c	-1	validated	silent	c.5133	p.F1711	1.000	NULL	HMMSmart_RING,HMMSmart_PHD,HMMPfam_MOZ_SAS,HMMSmart_H15,superfamily_FYVE_PHD_ZnF,superfamily_Acyl_CoA_acyltransferase,PatternScan_ZF_PHD_1,HMMPfam_PHD,superfamily_SSF46785	-	no_errors
NCOA1	0	genome.wustl.edu	37	2	24991255	24991255	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	2	24991255	24991255	G	A	SNP	NCOA1	NM_003743.4	human	genbank	58_37c	+1	reviewed	missense	c.4321	p.E1441K	1.000	NULL	HMMSmart_SM00091,HMMPfam_HLH,HMMSmart_SM00353,superfamily_Nuclear receptor coactivator interlocking domain,HMMPfam_DUF1518,superfamily_HLH helix-loop-helix DNA-binding domain,HMMPfam_PAS,HMMPfam_Nuc_rec_co-act,HMMPfam_SRC-1,superfamily_PYP-like sensor domain (PAS domain)	-	no_errors
NDRG1	0	genome.wustl.edu	37	8	134266813	134266813	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	8	134266813	134266813	G	A	SNP	NDRG1	NM_001135242.1	human	genbank	58_37c	-1	reviewed	missense	c.563	p.P188L	0.981	HMMPfam_Ndr,superfamily_alpha/beta-Hydrolases	HMMPfam_Ndr,PatternScan_PHOSPHOPANTETHEINE,superfamily_alpha/beta-Hydrolases	-	no_errors
NEO1	0	genome.wustl.edu	37	15	73428353	73428353	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	15	73428353	73428353	G	C	SNP	NEO1	NM_002499.3	human	genbank	58_37c	+1	validated	missense	c.1000	p.E334Q	1.000	HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,HMMPfam_Neogenin_C,PatternScan_TONB_DEPENDENT_REC_1,HMMPfam_I-set,superfamily_Immunoglobulin	-	no_errors
NHP2L1	0	genome.wustl.edu	37	22	42071108	42071108	+	Silent	SNP	C	C	A	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	22	42071108	42071108	C	A	SNP	NHP2L1	NM_001003796.1	human	genbank	58_37c	-1	reviewed	silent	c.216	p.L72	1.000	HMMPfam_Ribosomal_L7Ae,superfamily_L30e-like	PatternScan_RIBOSOMAL_L7AE,HMMPfam_Ribosomal_L7Ae,superfamily_L30e-like	-	no_errors
NID1	0	genome.wustl.edu	37	1	236141249	236141249	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	1	236141249	236141249	T	G	SNP	NID1	NM_002508.2	human	genbank	58_37c	-1	reviewed	missense	c.3662	p.H1221P	1.000	HMMSmart_SM00181,superfamily_EGF/Laminin,superfamily_YWTD domain	HMMPfam_Ldl_recept_b,HMMSmart_SM00135,PatternScan_ASX_HYDROXYL,HMMPfam_Thyroglobulin_1,HMMSmart_SM00211,PatternScan_THYROGLOBULIN_1_1,superfamily_Thyroglobulin type-1 domain,HMMSmart_SM00179,HMMPfam_NIDO,HMMSmart_SM00539,HMMPfam_EGF,HMMSmart_SM00181,HMMPfam_G2F,HMMSmart_SM00682,superfamily_GFP-like,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF_CA,PatternScan_EGF_CA,superfamily_EGF/Laminin,superfamily_YWTD domain	-	no_errors
NISCH	0	genome.wustl.edu	37	3	52521224	52521224	+	Silent	SNP	C	C	G	rs139766391	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	3	52521224	52521224	C	G	SNP	NISCH	NM_007184.3	human	genbank	58_37c	+1	validated	silent	c.1716	p.A572	0.013	NULL	HMMPfam_LRR_1,HMMPfam_PX,HMMSmart_SM00312,superfamily_PX domain,PatternScan_CYTOCHROME_P450,HMMSmart_SM00365,superfamily_Outer arm dynein light chain 1	-	no_errors
NKTR	0	genome.wustl.edu	37	3	42678814	42678814	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	3	42678814	42678814	A	G	SNP	NKTR	NM_005385.3	human	genbank	58_37c	+1	reviewed	missense	c.1618	p.K540E	1.000	NULL	HMMPfam_Pro_isomerase,PatternScan_CSA_PPIASE_1,superfamily_CSA_PPIase	-	no_errors
NPEPPS	0	genome.wustl.edu	37	17	45689957	45689957	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	17	45689957	45689957	C	G	SNP	NPEPPS	NM_006310.3	human	genbank	58_37c	+1	reviewed	missense	c.2227	p.L743V	1.000	NULL	PatternScan_ZINC_PROTEASE,HMMPfam_Peptidase_M1,superfamily_SSF55486,superfamily_SSF63737	-	no_errors
NUP160	0	genome.wustl.edu	37	11	47814408	47814408	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	11	47814408	47814408	G	A	SNP	NUP160	NM_015231.1	human	genbank	58_37c	-1	validated	missense	c.3380	p.A1127V	1.000	NULL	PatternScan_HIS_ACID_PHOSPHAT_1	-	no_errors
OR5M11	0	genome.wustl.edu	37	11	56310392	56310392	+	Silent	SNP	C	C	A	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	11	56310392	56310392	C	A	SNP	OR5M11	NM_001005245.1	human	genbank	58_37c	-1	provisional	silent	c.342	p.L114	0.812	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
PAN2	0	genome.wustl.edu	37	12	56721845	56721845	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	12	56721845	56721845	C	G	SNP	PAN2	NM_001127460.2	human	genbank	58_37c	-1	reviewed	missense	c.585	p.E195D	0.128	superfamily_WD40 repeat-like	HMMPfam_UCH,HMMSmart_SM00479,superfamily_WD40 repeat-like,superfamily_Ribonuclease H-like,HMMPfam_Exonuc_X-T,superfamily_Cysteine proteinases	-	no_errors
PCDHA8	0	genome.wustl.edu	37	5	140221195	140221195	+	Missense_Mutation	SNP	G	G	C	rs61730626	byFrequency	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	5	140221195	140221195	G	C	SNP	PCDHA8	NM_018911.2	human	genbank	58_37c	+1	reviewed	missense	c.289	p.G97R	0.983	HMMSmart_SM00112,HMMPfam_Cadherin_2,superfamily_Cadherin-like	HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin_2,superfamily_Cadherin-like	-	no_errors
PCLO	0	genome.wustl.edu	37	7	82579907	82579907	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	7	82579907	82579907	C	A	SNP	PCLO	NM_033026.5	human	genbank	58_37c	-1	validated	nonsense	c.9997	p.E3333*	0.995	NULL	HMMPfam_C2,HMMSmart_SM00239,HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like,HMMPfam_zf-piccolo,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),superfamily_FYVE/PHD zinc finger	-	no_errors
PCLO	0	genome.wustl.edu	37	7	82784791	82784791	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	7	82784791	82784791	T	G	SNP	PCLO	NM_033026.5	human	genbank	58_37c	-1	validated	missense	c.1166	p.K389T	0.017	NULL	HMMPfam_C2,HMMSmart_SM00239,HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like,HMMPfam_zf-piccolo,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),superfamily_FYVE/PHD zinc finger	-	no_errors
PLD1	0	genome.wustl.edu	37	3	171320875	171320875	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	3	171320875	171320875	C	G	SNP	PLD1	NM_002662.3	human	genbank	58_37c	-1	validated	missense	c.3218	p.W1073S	1.000	NULL	HMMPfam_PX,HMMSmart_SM00312,superfamily_PX domain,HMMPfam_PLDc,HMMSmart_SM00155,HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like,superfamily_Phospholipase D/nuclease	-	no_errors
PLXNA3	0	genome.wustl.edu	37	X	153695976	153695976	+	Nonsense_Mutation	SNP	C	A	A	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	X	153695976	153695976	C	A	SNP	PLXNA3	NM_017514.3	human	genbank	58_37c	+1	reviewed	nonsense	c.3530	p.S1177*	1.000	HMMPfam_TIG,HMMSmart_IPT,superfamily_Ig_E-set	HMMPfam_Sema,HMMSmart_Sema,superfamily_Sema,HMMPfam_PSI,HMMPfam_TIG,HMMSmart_IPT,HMMSmart_PSI,superfamily_Rho_GAP,HMMPfam_Plexin_cytopl,superfamily_Ig_E-set,superfamily_Plexin-like_fold	-	no_errors
POLR1D	0	genome.wustl.edu	37	13	28239878	28239878	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	13	28239878	28239878	A	C	SNP	POLR1D	NM_152705.1	human	genbank	58_37c	+1	provisional	missense	c.157	p.N53H	1.000	NULL	NULL	-	no_errors
POLR1D	0	genome.wustl.edu	37	13	28239894	28239896	+	In_Frame_Del	DEL	ATA	ATA	-	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	ATA	ATA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	13	28239894	28239896	ATA	-	DEL	POLR1D	NM_152705.1	human	genbank	58_37c	+1	provisional	in_frame_del	c.173_175	p.HK58in_frame_delQ	0.823:0.362:0.915	NULL	NULL	-	no_errors
PRG4	0	genome.wustl.edu	37	1	186266033	186266033	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	1	186266033	186266033	A	C	SNP	PRG4	NM_005807.3	human	genbank	58_37c	+1	reviewed	missense	c.26	p.Y9S	0.049	NULL	superfamily_Hemopexin-like domain,HMMPfam_Somatomedin_B,HMMSmart_SM00201,PatternScan_SMB_1,PatternScan_HEMOPEXIN,HMMPfam_Hemopexin,HMMSmart_SM00120,superfamily_Somatomedin B domain	-	no_errors
RAD21L1	0	genome.wustl.edu	37	20	1234974	1234974	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	20	1234974	1234974	G	A	SNP	RAD21L1	NM_001136566.2	human	genbank	58_37c	+1	validated	missense	c.1544	p.R515Q	0.993	HMMPfam_Rad21_Rec8	HMMPfam_Rad21_Rec8,HMMPfam_Rad21_Rec8_N	-	no_errors
RAI1	0	genome.wustl.edu	37	17	17697099	17697100	+	Frame_Shift_Del	DEL	GC	GC	-	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	GC	GC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	17	17697099	17697100	GC	-	DEL	RAI1	NM_030665.3	human	genbank	58_37c	+1	reviewed	frame_shift_del	c.837_838	p.Q280fs	0.891:0.907	NULL	HMMSmart_SM00249	-	no_errors
RBMS2P1	0	genome.wustl.edu	37	12	94818343	94818343	+	Silent	SNP	G	G	C	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	12	94818343	94818343	G	C	SNP	RBMS2P1	ENST00000393113	human	ensembl	58_37c	-1	known	silent	c.312	p.P104	1.000	superfamily_RNA-binding domain RBD	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD	-	no_stop_codon
RHD	0	genome.wustl.edu	37	1	25629943	25629943	+	Missense_Mutation	SNP	A	A	C	rs590787	byFrequency	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	1	25629943	25629943	A	C	SNP	RHD	NM_016124.3	human	genbank	58_37c	+1	reviewed	missense	c.932	p.Y311S	0.001	HMMPfam_Ammonium_transp,superfamily_Ammonium ransporter (Pfam 00909)	HMMPfam_Ammonium_transp,superfamily_Ammonium ransporter (Pfam 00909)	-	no_errors
RMI1	0	genome.wustl.edu	37	9	86616601	86616601	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	9	86616601	86616601	G	A	SNP	RMI1	NM_024945.2	human	genbank	58_37c	+1	validated	missense	c.700	p.D234N	0.275	NULL	HMMPfam_tRNA_anti,HMMPfam_DUF1767	-	no_errors
RNF17	0	genome.wustl.edu	37	13	25428135	25428135	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	13	25428135	25428135	A	G	SNP	RNF17	NM_031277.2	human	genbank	58_37c	+1	reviewed	missense	c.3463	p.K1155E	0.075	NULL	HMMSmart_SM00333,HMMPfam_TUDOR,superfamily_Staphylococcal nuclease,PatternScan_ZF_RING_1,superfamily_RING/U-box,superfamily_Tudor/PWWP/MBT	-	no_errors
ROBO1	0	genome.wustl.edu	37	3	78656060	78656060	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	3	78656060	78656060	C	G	SNP	ROBO1	NM_002941.3	human	genbank	58_37c	-1	reviewed	missense	c.4567	p.D1523H	1.000	NULL	HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,HMMPfam_I-set,superfamily_Immunoglobulin	-	no_errors
ROBO1	0	genome.wustl.edu	37	3	78742501	78742516	+	Splice_Site	DEL	ACCCAACTAAAACAAA	ACCCAACTAAAACAAA	-	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	ACCCAACTAAAACAAA	ACCCAACTAAAACAAA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	3	78742501	78742516	ACCCAACTAAAACAAA	-	DEL	ROBO1	ENST00000495273	human	ensembl	58_37c	-1	known	splice_site_del	c.929-10_929-1	e7-1	1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000	-	-	-	no_errors
RPL18A	0	genome.wustl.edu	37	19	17972952	17972952	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	19	17972952	17972952	G	A	SNP	RPL18A	NM_000980.2	human	genbank	58_37c	+1	reviewed	missense	c.248	p.R83H	1.000	HMMPfam_Ribosomal_L18ae	HMMPfam_Ribosomal_L18ae	-	no_errors
RPL3	0	genome.wustl.edu	37	22	39711522	39711522	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	22	39711522	39711522	C	G	SNP	RPL3	ENST00000427905	human	ensembl	58_37c	-1	known	missense	c.634	p.D212H	1.000	HMMPfam_Ribosomal_L3,superfamily_Translation proteins	HMMPfam_Ribosomal_L3,superfamily_Translation proteins	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region
RREB1	0	genome.wustl.edu	37	6	7248826	7248826	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	6	7248826	7248826	G	C	SNP	RREB1	NM_001003699.3	human	genbank	58_37c	+1	reviewed	missense	c.4854	p.Q1618H	1.000	superfamily_SSF57667	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
RTN1	0	genome.wustl.edu	37	14	60212735	60212737	+	In_Frame_Del	DEL	CTC	CTC	-	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	CTC	CTC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	14	60212735	60212737	CTC	-	DEL	RTN1	NM_021136.2	human	genbank	58_37c	-1	reviewed	in_frame_del	c.706_704	p.G235in_frame_del	0.000:0.000:0.000	NULL	HMMPfam_Reticulon,PatternScan_HISTONE_H4	-	no_errors
RUNX1	0	genome.wustl.edu	37	21	36231751	36231751	+	Silent	SNP	C	C	T	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	21	36231751	36231751	C	T	SNP	RUNX1	ENST00000342083	human	ensembl	58_37c	-1	known	silent	c.561	p.G187	0.003	NULL	superfamily_p53-like transcription factors,HMMPfam_Runt	-	no_stop_codon
SCMH1	0	genome.wustl.edu	37	1	41499688	41499688	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	1	41499688	41499688	T	C	SNP	SCMH1	NM_001031694.2	human	genbank	58_37c	-1	validated	missense	c.1681	p.M561V	0.996	NULL	HMMPfam_SAM_1,HMMSmart_SM00454,HMMPfam_MBT,HMMSmart_SM00561,superfamily_SAM/Pointed domain,superfamily_Tudor/PWWP/MBT	-	no_errors
SERPINB1	0	genome.wustl.edu	37	6	2840702	2840702	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	6	2840702	2840702	G	C	SNP	SERPINB1	NM_030666.2	human	genbank	58_37c	-1	provisional	missense	c.119	p.A40G	1.000	HMMPfam_Serpin,HMMSmart_SERPIN,superfamily_Prot_inh_serpin	HMMPfam_Serpin,HMMSmart_SERPIN,PatternScan_SERPIN,superfamily_Prot_inh_serpin	-	no_errors
SH3GL3	0	genome.wustl.edu	37	15	84241415	84241415	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	15	84241415	84241415	C	T	SNP	SH3GL3	NM_003027.3	human	genbank	58_37c	+1	validated	nonsense	c.430	p.Q144*	1.000	HMMPfam_BAR,HMMSmart_SM00721	HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain,HMMPfam_BAR,HMMSmart_SM00721	-	no_errors
SLC1A7	0	genome.wustl.edu	37	1	53556433	53556433	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	1	53556433	53556433	G	C	SNP	SLC1A7	NM_006671.4	human	genbank	58_37c	-1	validated	missense	c.1077	p.N359K	1.000	HMMPfam_SDF	HMMPfam_SDF,PatternScan_NA_DICARBOXYL_SYMP_1,PatternScan_NA_DICARBOXYL_SYMP_2	-	no_errors
SLC24A5	0	genome.wustl.edu	37	15	48413271	48413271	+	Silent	SNP	G	G	A	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	15	48413271	48413271	G	A	SNP	SLC24A5	NM_205850.2	human	genbank	58_37c	+1	reviewed	silent	c.30	p.A10	0.018	NULL	HMMPfam_Na_Ca_ex	-	no_errors
SLC25A1	0	genome.wustl.edu	37	22	19164129	19164129	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	22	19164129	19164129	C	T	SNP	SLC25A1	NM_005984.2	human	genbank	58_37c	-1	validated	missense	c.709	p.G237R	1.000	superfamily_Mitoch_carrier,HMMPfam_Mito_carr	superfamily_Mitoch_carrier,HMMPfam_Mito_carr	-	no_errors
SLC25A1	0	genome.wustl.edu	37	22	19164682	19164682	+	Silent	SNP	G	G	C	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	22	19164682	19164682	G	C	SNP	SLC25A1	NM_005984.2	human	genbank	58_37c	-1	validated	silent	c.477	p.P159	0.982	superfamily_Mitoch_carrier,HMMPfam_Mito_carr	superfamily_Mitoch_carrier,HMMPfam_Mito_carr	-	no_errors
SLC43A3	0	genome.wustl.edu	37	11	57177571	57177571	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	11	57177571	57177571	G	A	SNP	SLC43A3	NM_014096.2	human	genbank	58_37c	-1	validated	missense	c.1084	p.L362F	1.000	superfamily_MFS_gen_substrate_transporter	superfamily_MFS_gen_substrate_transporter	-	no_errors
SLFN14	0	genome.wustl.edu	37	17	33884544	33884544	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	17	33884544	33884544	C	G	SNP	SLFN14	NM_001129820.1	human	genbank	58_37c	-1	provisional	missense	c.538	p.E180Q	1.000	NULL	HMMPfam_AAA_4	-	no_errors
SMAP1	0	genome.wustl.edu	37	6	71508424	71508424	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	6	71508424	71508424	C	A	SNP	SMAP1	NM_001044305.1	human	genbank	58_37c	+1	reviewed	missense	c.560	p.P187Q	1.000	NULL	HMMPfam_ArfGap,HMMSmart_SM00105,superfamily_Pyk2-associated protein beta ARF-GAP domain	-	no_errors
SMG5	0	genome.wustl.edu	37	1	156236117	156236117	+	Missense_Mutation	SNP	G	G	T	rs144789236	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	1	156236117	156236117	G	T	SNP	SMG5	NM_015327.2	human	genbank	58_37c	-1	validated	missense	c.1310	p.P437H	0.612	NULL	HMMSmart_PINc,HMMPfam_EST1	-	no_errors
SMOC2	0	genome.wustl.edu	37	6	168910644	168910644	+	Missense_Mutation	SNP	C	C	T	rs141002558	byFrequency	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	6	168910644	168910644	C	T	SNP	SMOC2	NM_022138.2	human	genbank	58_37c	+1	reviewed	missense	c.134	p.A45V	0.302	superfamily_Thyroglobulin_1,HMMPfam_Kazal_1,HMMSmart_KAZAL	HMMPfam_Thyroglobulin_1,HMMSmart_TY,PatternScan_THYROGLOBULIN_1_1,superfamily_Thyroglobulin_1,HMMSmart_EFh,HMMPfam_Kazal_1,HMMSmart_KAZAL,PatternScan_EF_HAND_1,HMMPfam_SPARC_Ca_bdg,superfamily_SSF47473	-	no_errors
SPDYE6	0	genome.wustl.edu	37	7	101988863	101988863	+	Missense_Mutation	SNP	C	C	T	rs2960249	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	7	101988863	101988863	C	T	SNP	SPDYE6	XM_002342745.1	human	genbank	58_37c	-1	model	missense	c.1010	p.R337H	0.003	NULL	NULL	-	no_errors
SPG20	0	genome.wustl.edu	37	13	36909960	36909960	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	13	36909960	36909960	T	G	SNP	SPG20	NM_001142294.1	human	genbank	58_37c	-1	reviewed	missense	c.8	p.Q3P	1.000	NULL	HMMPfam_MIT,HMMSmart_MIT	-	no_errors
SPOCK1	0	genome.wustl.edu	37	5	136403503	136403503	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	5	136403503	136403503	G	C	SNP	SPOCK1	NM_004598.3	human	genbank	58_37c	-1	reviewed	missense	c.490	p.H164D	1.000	HMMSmart_KAZAL,HMMPfam_Kazal_2,superfamily_SSF100895	HMMPfam_Thyroglobulin_1,HMMSmart_TY,PatternScan_THYROGLOBULIN_1_1,superfamily_Thyroglobulin_1,HMMSmart_KAZAL,HMMPfam_Kazal_2,HMMPfam_SPARC_Ca_bdg,superfamily_SSF100895,superfamily_SSF47473	-	no_errors
SPR	0	genome.wustl.edu	37	2	73115498	73115498	+	Silent	SNP	G	G	A	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	2	73115498	73115498	G	A	SNP	SPR	NM_003124.4	human	genbank	58_37c	+1	reviewed	silent	c.360	p.V120	1.000	HMMPfam_adh_short,superfamily_NAD(P)-bd	HMMPfam_adh_short,superfamily_NAD(P)-bd	-	no_errors
SPRR1A	0	genome.wustl.edu	37	1	152957724	152957724	+	Silent	SNP	G	G	A	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	1	152957724	152957724	G	A	SNP	SPRR1A	NM_005987.2	human	genbank	58_37c	+1	validated	silent	c.18	p.Q6	1.000	HMMPfam_Cornifin	HMMPfam_Cornifin	-	no_errors
STOML3	0	genome.wustl.edu	37	13	39542611	39542611	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	13	39542611	39542611	C	G	SNP	STOML3	NM_145286.2	human	genbank	58_37c	-1	validated	missense	c.577	p.D193H	1.000	HMMPfam_Band_7,HMMSmart_PHB	HMMPfam_Band_7,HMMSmart_PHB,PatternScan_BAND_7	-	no_errors
SUPT6H	0	genome.wustl.edu	37	17	27022374	27022374	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	17	27022374	27022374	G	C	SNP	SUPT6H	NM_003170.3	human	genbank	58_37c	+1	validated	missense	c.3779	p.G1260A	1.000	HMMPfam_S1,superfamily_Nucleic acid-binding proteins,HMMSmart_SM00316	HMMSmart_SM00252,HMMPfam_S1,HMMSmart_SM00732,superfamily_Nucleic acid-binding proteins,HMMPfam_Tex_N,HMMSmart_SM00316,superfamily_SH2 domain	-	no_errors
TP53	0	genome.wustl.edu	37	17	7578271	7578271	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	17	7578271	7578271	T	C	SNP	TP53	NM_000546.4	human	genbank	58_37c	-1	reviewed	missense	c.578	p.H193R	0.998	superfamily_p53-like transcription factors,HMMPfam_P53	PatternScan_P53,superfamily_p53-like transcription factors,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain,HMMPfam_P53,HMMPfam_P53_TAD	-	no_errors
TRIM23	0	genome.wustl.edu	37	5	64907435	64907435	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	5	64907435	64907435	G	C	SNP	TRIM23	NM_001656.3	human	genbank	58_37c	-1	reviewed	missense	c.640	p.H214D	1.000	HMMSmart_SM00336	HMMPfam_zf-B_box,HMMSmart_SM00336,HMMSmart_SM00184,HMMSmart_SM00175,HMMSmart_SM00502,HMMSmart_SM00178,HMMSmart_SM00177,PatternScan_ARF,HMMPfam_Arf,PatternScan_ZF_RING_1,HMMPfam_zf-C3HC4,superfamily_P-loop containing nucleoside triphosphate hydrolases,superfamily_RING/U-box	-	no_errors
TSPAN14	0	genome.wustl.edu	37	10	82264498	82264498	+	Silent	SNP	C	C	G	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	10	82264498	82264498	C	G	SNP	TSPAN14	NM_030927.2	human	genbank	58_37c	+1	validated	silent	c.96	p.V32	1.000	HMMPfam_Tetraspannin	superfamily_Tetraspanin,HMMPfam_Tetraspannin,PatternScan_TM4_1	-	no_errors
TTC23	0	genome.wustl.edu	37	15	99759224	99759224	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	15	99759224	99759224	C	G	SNP	TTC23	NM_001040655.1	human	genbank	58_37c	-1	validated	missense	c.334	p.E112Q	1.000	HMMSmart_SM00028,superfamily_TPR-like	HMMSmart_SM00028,superfamily_TPR-like	-	no_errors
TXNDC2	0	genome.wustl.edu	37	18	9887863	9887863	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	18	9887863	9887863	C	A	SNP	TXNDC2	NM_001098529.1	human	genbank	58_37c	+1	validated	missense	c.1387	p.L463M	0.094	superfamily_Thioredoxin-like,HMMPfam_Thioredoxin	superfamily_Thioredoxin-like,HMMPfam_Thioredoxin	-	no_errors
UACA	0	genome.wustl.edu	37	15	70979933	70979949	+	Frame_Shift_Del	DEL	CATATTGTTGGCCTACT	CATATTGTTGGCCTACT	-	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	CATATTGTTGGCCTACT	CATATTGTTGGCCTACT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	15	70979933	70979949	CATATTGTTGGCCTACT	-	DEL	UACA	NM_018003.2	human	genbank	58_37c	-1	validated	frame_shift_del	c.548_532	p.R179fs	1.000:1.000:0.990:0.994:0.853:0.180:0.163:0.141:0.407:1.000:1.000:1.000:1.000:1.000:0.995:1.000:1.000	HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK	HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK,HMMPfam_Pox_A_type_inc	-	no_errors
UBR5	0	genome.wustl.edu	37	8	103297407	103297407	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	8	103297407	103297407	C	T	SNP	UBR5	NM_015902.4	human	genbank	58_37c	-1	reviewed	missense	c.5644	p.E1882K	1.000	NULL	HMMPfam_HECT,HMMSmart_HECTc,superfamily_HECT,HMMPfam_PABP,HMMSmart_PolyA,superfamily_PABP_HYD,HMMPfam_zf-UBR,HMMSmart_ZnF_UBR1	-	no_errors
UCP3	0	genome.wustl.edu	37	11	73718048	73718048	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	11	73718048	73718048	C	T	SNP	UCP3	NM_003356.3	human	genbank	58_37c	-1	reviewed	missense	c.40	p.A14T	0.005	superfamily_Mitochondrial carrier,HMMPfam_Mito_carr	superfamily_Mitochondrial carrier,HMMPfam_Mito_carr	-	no_errors
WT1	0	genome.wustl.edu	37	11	32410657	32410657	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	11	32410657	32410657	G	A	SNP	WT1	NM_024426.3	human	genbank	58_37c	-1	reviewed	missense	c.1501	p.R501C	1.000	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	HMMPfam_WT1,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZMIZ2	0	genome.wustl.edu	37	7	44795851	44795851	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	7	44795851	44795851	G	A	SNP	ZMIZ2	NM_031449.3	human	genbank	58_37c	+1	validated	missense	c.3	p.M1I	1.000	NULL	HMMPfam_zf-MIZ,superfamily_RING/U-box	-	no_errors
ZNF121	0	genome.wustl.edu	37	19	9677204	9677204	+	Silent	SNP	A	A	G	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	19	9677204	9677204	A	G	SNP	ZNF121	NM_001008727.2	human	genbank	58_37c	-1	validated	silent	c.585	p.T195	1.000	superfamily_SSF57667	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
ZNF250	0	genome.wustl.edu	37	8	146106959	146106959	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	8	146106959	146106959	G	A	SNP	ZNF250	NM_021061.3	human	genbank	58_37c	-1	validated	missense	c.1624	p.R542C	0.843	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZNF43	0	genome.wustl.edu	37	19	21992075	21992075	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	19	21992075	21992075	T	C	SNP	ZNF43	NM_003423.2	human	genbank	58_37c	-1	validated	missense	c.764	p.Y255C	0.973	superfamily_C2H2 and C2HC zinc fingers	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZNF519	0	genome.wustl.edu	37	18	14105980	14105980	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	18	14105980	14105980	C	G	SNP	ZNF519	NM_145287.3	human	genbank	58_37c	-1	validated	missense	c.559	p.E187Q	0.845	HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZNF587	0	genome.wustl.edu	37	19	58371075	58371075	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	19	58371075	58371075	G	C	SNP	ZNF587	ENST00000339656	human	ensembl	58_37c	+1	known	missense	c.1295	p.G432A	1.000	superfamily_SSF57667	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
ZNF679	0	genome.wustl.edu	37	7	63726567	63726567	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-C8-A27B-01A-11D-A167-09	TCGA-C8-A27B-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11e43e41-54b8-4232-b078-5062288d3868	922226ba-6244-4953-ad42-f4daa474c288	7	63726567	63726567	T	C	SNP	ZNF679	NM_153363.2	human	genbank	58_37c	+1	validated	missense	c.556	p.C186R	0.556	HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
