Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ATP13A1	0	genome.wustl.edu	37	19	19767522	19767522	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D8-A1XV-01A-11D-A14K-09	TCGA-D8-A1XV-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a76adfd1-8c89-4c13-b570-5ccc47043a70	679a76a2-1e0a-4289-a8e2-b460b9da28af	19	19767522	19767522	G	C	SNP	ATP13A1	NM_020410.2	human	genbank	58_37c	-1	validated	missense	c.1030	p.R344G	1.000	HMMPfam_E1-E2_ATPase,superfamily_Calcium ATPase transduction domain A	HMMPfam_Hydrolase,HMMPfam_E1-E2_ATPase,PatternScan_ATPASE_E1_E2,superfamily_HAD-like,superfamily_Calcium ATPase transduction domain A,superfamily_Metal cation-transporting ATPase ATP-binding domain N	-	no_errors
C1orf220	0	genome.wustl.edu	37	1	178514983	178514983	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-D8-A1XV-01A-11D-A14K-09	TCGA-D8-A1XV-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a76adfd1-8c89-4c13-b570-5ccc47043a70	679a76a2-1e0a-4289-a8e2-b460b9da28af	1	178514983	178514983	C	G	SNP	C1orf220	ENST00000319387	human	ensembl	58_37c	+1	known	missense	c.369	p.N123K	0.000	NULL	NULL	-	no_errors
CCDC17	0	genome.wustl.edu	37	1	46088465	46088465	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1XV-01A-11D-A14K-09	TCGA-D8-A1XV-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a76adfd1-8c89-4c13-b570-5ccc47043a70	679a76a2-1e0a-4289-a8e2-b460b9da28af	1	46088465	46088465	G	A	SNP	CCDC17	NM_001114938.1	human	genbank	58_37c	-1	provisional	missense	c.602	p.P201L	0.010	NULL	NULL	-	no_errors
CD177	0	genome.wustl.edu	37	19	43864445	43864445	+	Silent	SNP	C	C	A	novel	unknown	TCGA-D8-A1XV-01A-11D-A14K-09	TCGA-D8-A1XV-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a76adfd1-8c89-4c13-b570-5ccc47043a70	679a76a2-1e0a-4289-a8e2-b460b9da28af	19	43864445	43864445	C	A	SNP	CD177	NM_020406.2	human	genbank	58_37c	+1	validated	silent	c.648	p.T216	0.000	NULL	HMMPfam_UPAR_LY6,superfamily_Snake toxin-like	-	pseudogene
CD200R1L	0	genome.wustl.edu	37	3	112545931	112545931	+	Silent	SNP	A	A	G	novel	unknown	TCGA-D8-A1XV-01A-11D-A14K-09	TCGA-D8-A1XV-10A-01D-A14K-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a76adfd1-8c89-4c13-b570-5ccc47043a70	679a76a2-1e0a-4289-a8e2-b460b9da28af	3	112545931	112545931	A	G	SNP	CD200R1L	NM_001008784.2	human	genbank	58_37c	-1	validated	silent	c.588	p.S196	0.050	superfamily_Immunoglobulin	superfamily_Immunoglobulin	-	no_errors
CEACAM16	0	genome.wustl.edu	37	19	45209123	45209123	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1XV-01A-11D-A14K-09	TCGA-D8-A1XV-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a76adfd1-8c89-4c13-b570-5ccc47043a70	679a76a2-1e0a-4289-a8e2-b460b9da28af	19	45209123	45209123	G	A	SNP	CEACAM16	NM_001039213.2	human	genbank	58_37c	+1	validated	missense	c.1102	p.V368M	1.000	superfamily_SSF48726	HMMSmart_IGc2,HMMSmart_IG,HMMPfam_V-set,HMMPfam_ig,superfamily_SSF48726	-	no_errors
CLPX	0	genome.wustl.edu	37	15	65459107	65459107	+	Silent	SNP	G	G	C	novel	unknown	TCGA-D8-A1XV-01A-11D-A14K-09	TCGA-D8-A1XV-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a76adfd1-8c89-4c13-b570-5ccc47043a70	679a76a2-1e0a-4289-a8e2-b460b9da28af	15	65459107	65459107	G	C	SNP	CLPX	NM_006660.3	human	genbank	58_37c	-1	provisional	silent	c.375	p.V125	1.000	NULL	HMMSmart_SM00382,HMMPfam_AAA_2,HMMPfam_ClpB_D2-small,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
CYP1A2	0	genome.wustl.edu	37	15	75047325	75047325	+	Missense_Mutation	SNP	G	G	A	rs143028942	unknown	TCGA-D8-A1XV-01A-11D-A14K-09	TCGA-D8-A1XV-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a76adfd1-8c89-4c13-b570-5ccc47043a70	679a76a2-1e0a-4289-a8e2-b460b9da28af	15	75047325	75047325	G	A	SNP	CYP1A2	NM_000761.3	human	genbank	58_37c	+1	reviewed	missense	c.1447	p.V483M	0.004	HMMPfam_p450,superfamily_Cytochrome_P450	HMMPfam_p450,superfamily_Cytochrome_P450,PatternScan_CYTOCHROME_P450	-	no_errors
CYP2D7P1	0	genome.wustl.edu	37	22	42537569	42537569	+	RNA	SNP	G	G	T	novel	unknown	TCGA-D8-A1XV-01A-11D-A14K-09	TCGA-D8-A1XV-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a76adfd1-8c89-4c13-b570-5ccc47043a70	679a76a2-1e0a-4289-a8e2-b460b9da28af	22	42537569	42537569	G	T	SNP	CYP2D7P1	NR_002570.2	human	genbank	58_37c	-1	validated	rna	NULL	NULL	1.000	-	-	-	pseudogene
DDX6	0	genome.wustl.edu	37	11	118626189	118626189	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-D8-A1XV-01A-11D-A14K-09	TCGA-D8-A1XV-10A-01D-A14K-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a76adfd1-8c89-4c13-b570-5ccc47043a70	679a76a2-1e0a-4289-a8e2-b460b9da28af	11	118626189	118626189	T	A	SNP	DDX6	NM_004397.4	human	genbank	58_37c	-1	reviewed	missense	c.1198	p.I400L	1.000	HMMPfam_Helicase_C,HMMSmart_HELICc,superfamily_SSF52540	PatternScan_DEAD_ATP_HELICASE,HMMPfam_Helicase_C,HMMSmart_HELICc,HMMPfam_DEAD,HMMSmart_DEXDc,superfamily_SSF52540	-	no_errors
ENSG00000210082	0	genome.wustl.edu	37	MT	2815	2815	+	RNA	SNP	G	G	A	novel	unknown	TCGA-D8-A1XV-01A-11D-A14K-09	TCGA-D8-A1XV-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a76adfd1-8c89-4c13-b570-5ccc47043a70	679a76a2-1e0a-4289-a8e2-b460b9da28af	MT	2815	2815	G	A	SNP	ENSG00000210082	ENST00000387347	human	ensembl	58_37c	+1	known	rna	NULL	NULL	NULL	-	-	-	no_errors
ENSG00000211459	0	genome.wustl.edu	37	MT	1538	1538	+	RNA	SNP	G	G	A	novel	unknown	TCGA-D8-A1XV-01A-11D-A14K-09	TCGA-D8-A1XV-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a76adfd1-8c89-4c13-b570-5ccc47043a70	679a76a2-1e0a-4289-a8e2-b460b9da28af	MT	1538	1538	G	A	SNP	ENSG00000211459	ENST00000389680	human	ensembl	58_37c	+1	known	rna	NULL	NULL	NULL	-	-	-	no_errors
ENSG00000232657	0	genome.wustl.edu	37	4	49110449	49110449	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1XV-01A-11D-A14K-09	TCGA-D8-A1XV-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a76adfd1-8c89-4c13-b570-5ccc47043a70	679a76a2-1e0a-4289-a8e2-b460b9da28af	4	49110449	49110449	G	A	SNP	ENSG00000232657	ENST00000417204	human	ensembl	58_37c	-1	known	missense	c.53	p.P18L	0.000	NULL	NULL	-	no_stop_codon
FAM126A	0	genome.wustl.edu	37	7	22985376	22985376	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D8-A1XV-01A-11D-A14K-09	TCGA-D8-A1XV-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a76adfd1-8c89-4c13-b570-5ccc47043a70	679a76a2-1e0a-4289-a8e2-b460b9da28af	7	22985376	22985376	C	T	SNP	FAM126A	NM_032581.3	human	genbank	58_37c	-1	reviewed	silent	c.1398	p.P466	0.032	NULL	HMMPfam_Hyccin	-	no_errors
FBXO24	0	genome.wustl.edu	37	7	100187289	100187289	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1XV-01A-11D-A14K-09	TCGA-D8-A1XV-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a76adfd1-8c89-4c13-b570-5ccc47043a70	679a76a2-1e0a-4289-a8e2-b460b9da28af	7	100187289	100187289	G	A	SNP	FBXO24	ENST00000427939	human	ensembl	58_37c	+1	known	missense	c.26	p.R9Q	0.000	NULL	HMMPfam_F-box,HMMSmart_FBOX,superfamily_RCC1/BLIP-II,superfamily_SSF81383	-	no_errors
FFAR3	0	genome.wustl.edu	37	19	35849945	35849945	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D8-A1XV-01A-11D-A14K-09	TCGA-D8-A1XV-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a76adfd1-8c89-4c13-b570-5ccc47043a70	679a76a2-1e0a-4289-a8e2-b460b9da28af	19	35849945	35849945	C	T	SNP	FFAR3	NM_005304.3	human	genbank	58_37c	+1	validated	silent	c.153	p.D51	0.720	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
GOLGB1	0	genome.wustl.edu	37	3	121416391	121416391	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D8-A1XV-01A-11D-A14K-09	TCGA-D8-A1XV-10A-01D-A14K-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a76adfd1-8c89-4c13-b570-5ccc47043a70	679a76a2-1e0a-4289-a8e2-b460b9da28af	3	121416391	121416391	A	G	SNP	GOLGB1	ENST00000489400	human	ensembl	58_37c	-1	known	missense	c.2576	p.M859T	1.000	superfamily_Spectrin repeat	superfamily_Spectrin repeat	-	no_start_codon:pseudogene:no_stop_codon
HOMER1	0	genome.wustl.edu	37	5	78671930	78671930	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1XV-01A-11D-A14K-09	TCGA-D8-A1XV-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a76adfd1-8c89-4c13-b570-5ccc47043a70	679a76a2-1e0a-4289-a8e2-b460b9da28af	5	78671930	78671930	G	A	SNP	HOMER1	NM_004272.3	human	genbank	58_37c	-1	validated	missense	c.967	p.R323C	1.000	NULL	HMMPfam_WH1,HMMSmart_SM00461,superfamily_PH domain-like	-	no_errors
HPSE	0	genome.wustl.edu	37	4	84231232	84231232	+	Splice_Site	SNP	C	C	A	novel	unknown	TCGA-D8-A1XV-01A-11D-A14K-09	TCGA-D8-A1XV-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a76adfd1-8c89-4c13-b570-5ccc47043a70	679a76a2-1e0a-4289-a8e2-b460b9da28af	4	84231232	84231232	C	A	SNP	HPSE	NM_001098540.1	human	genbank	58_37c	-1	validated	splice_site	c.843-1	e6-1	1.000	-	-	-	no_errors
HRNR	0	genome.wustl.edu	37	1	152189016	152189016	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1XV-01A-11D-A14K-09	TCGA-D8-A1XV-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a76adfd1-8c89-4c13-b570-5ccc47043a70	679a76a2-1e0a-4289-a8e2-b460b9da28af	1	152189016	152189016	G	A	SNP	HRNR	NM_001009931.1	human	genbank	58_37c	-1	validated	missense	c.5089	p.R1697C	0.000	NULL	PatternScan_S100_CABP,HMMPfam_S_100,PatternScan_EF_HAND_1,HMMPfam_SVS_QK,superfamily_SSF47473	-	no_errors
IGSF8	0	genome.wustl.edu	37	1	160062103	160062103	+	Silent	SNP	T	T	C	novel	unknown	TCGA-D8-A1XV-01A-11D-A14K-09	TCGA-D8-A1XV-10A-01D-A14K-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a76adfd1-8c89-4c13-b570-5ccc47043a70	679a76a2-1e0a-4289-a8e2-b460b9da28af	1	160062103	160062103	T	C	SNP	IGSF8	NM_052868.2	human	genbank	58_37c	-1	provisional	silent	c.1695	p.S565	0.001	HMMSmart_SM00409,superfamily_Immunoglobulin	HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin	-	no_errors
INO80C	0	genome.wustl.edu	37	18	33048579	33048579	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1XV-01A-11D-A14K-09	TCGA-D8-A1XV-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a76adfd1-8c89-4c13-b570-5ccc47043a70	679a76a2-1e0a-4289-a8e2-b460b9da28af	18	33048579	33048579	G	A	SNP	INO80C	NM_001098817.1	human	genbank	58_37c	-1	validated	missense	c.683	p.P228L	1.000	NULL	HMMPfam_YL1_C	-	no_errors
KIF18B	0	genome.wustl.edu	37	17	43011380	43011380	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-D8-A1XV-01A-11D-A14K-09	TCGA-D8-A1XV-10A-01D-A14K-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a76adfd1-8c89-4c13-b570-5ccc47043a70	679a76a2-1e0a-4289-a8e2-b460b9da28af	17	43011380	43011380	T	A	SNP	KIF18B	NM_001080443.1	human	genbank	58_37c	-1	provisional	missense	c.973	p.I325F	1.000	HMMPfam_Kinesin,HMMSmart_SM00129,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_Kinesin,HMMSmart_SM00129,PatternScan_KINESIN_MOTOR_DOMAIN1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
LOC642236	0	genome.wustl.edu	37	9	68430215	68430215	+	RNA	SNP	G	G	T	rs71256887	unknown	TCGA-D8-A1XV-01A-11D-A14K-09	TCGA-D8-A1XV-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a76adfd1-8c89-4c13-b570-5ccc47043a70	679a76a2-1e0a-4289-a8e2-b460b9da28af	9	68430215	68430215	G	T	SNP	LOC642236	XR_041085.2	human	genbank	58_37c	-1	model	rna	NULL	NULL	1.000	-	-	-	no_errors
MGAT4B	0	genome.wustl.edu	37	5	179226297	179226297	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1XV-01A-11D-A14K-09	TCGA-D8-A1XV-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a76adfd1-8c89-4c13-b570-5ccc47043a70	679a76a2-1e0a-4289-a8e2-b460b9da28af	5	179226297	179226297	C	T	SNP	MGAT4B	NM_054013.3	human	genbank	58_37c	-1	reviewed	missense	c.1100	p.R367Q	0.980	HMMPfam_Glyco_transf_54	HMMPfam_Glyco_transf_54	-	no_errors
MT-CO2	0	genome.wustl.edu	37	MT	8090	8090	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-D8-A1XV-01A-11D-A14K-09	TCGA-D8-A1XV-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a76adfd1-8c89-4c13-b570-5ccc47043a70	679a76a2-1e0a-4289-a8e2-b460b9da28af	MT	8090	8090	G	A	SNP	MT-CO2	ENST00000361739	human	ensembl	58_37c	+1	known	missense	c.505	p.G169S	NULL	PatternScan_COX2,HMMPfam_COX2,superfamily_Cupredoxins	PatternScan_COX2,HMMPfam_COX2,superfamily_Cupredoxins,HMMPfam_COX2_TM,superfamily_Cytochrome c oxidase subunit II-like transmembrane region	-	mismatch_between_exon_seq_and_reference
MTMR6	0	genome.wustl.edu	37	13	25823617	25823617	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1XV-01A-11D-A14K-09	TCGA-D8-A1XV-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a76adfd1-8c89-4c13-b570-5ccc47043a70	679a76a2-1e0a-4289-a8e2-b460b9da28af	13	25823617	25823617	C	T	SNP	MTMR6	NM_004685.3	human	genbank	58_37c	-1	validated	missense	c.1619	p.R540H	0.000	NULL	HMMSmart_SM00404,HMMPfam_Myotub-related,PatternScan_TYR_PHOSPHATASE_1,superfamily_PH domain-like,superfamily_(Phosphotyrosine protein) phosphatases II	-	no_errors
MUC12	0	genome.wustl.edu	37	7	100646199	100646199	+	Missense_Mutation	SNP	T	T	C	rs181671450	unknown	TCGA-D8-A1XV-01A-11D-A14K-09	TCGA-D8-A1XV-10A-01D-A14K-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a76adfd1-8c89-4c13-b570-5ccc47043a70	679a76a2-1e0a-4289-a8e2-b460b9da28af	7	100646199	100646199	T	C	SNP	MUC12	ENST00000379442	human	ensembl	58_37c	+1	known	missense	c.12784	p.F4262L	0.015	NULL	HMMPfam_SEA,HMMSmart_SEA,PatternScan_EGF_1,PatternScan_EGF_2	-	no_errors
NCDN	0	genome.wustl.edu	37	1	36030851	36030851	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1XV-01A-11D-A14K-09	TCGA-D8-A1XV-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a76adfd1-8c89-4c13-b570-5ccc47043a70	679a76a2-1e0a-4289-a8e2-b460b9da28af	1	36030851	36030851	C	T	SNP	NCDN	NM_001014839.1	human	genbank	58_37c	+1	reviewed	nonsense	c.1777	p.R593*	0.991	HMMPfam_Neurochondrin	HMMPfam_Neurochondrin	-	no_errors
ODF2L	0	genome.wustl.edu	37	1	86841953	86841953	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D8-A1XV-01A-11D-A14K-09	TCGA-D8-A1XV-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a76adfd1-8c89-4c13-b570-5ccc47043a70	679a76a2-1e0a-4289-a8e2-b460b9da28af	1	86841953	86841953	C	A	SNP	ODF2L	NM_020729.2	human	genbank	58_37c	-1	validated	missense	c.773	p.G258V	0.129	NULL	superfamily_tRNA-binding arm	-	no_errors
PCDHGA3	0	genome.wustl.edu	37	5	140725686	140725686	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D8-A1XV-01A-11D-A14K-09	TCGA-D8-A1XV-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a76adfd1-8c89-4c13-b570-5ccc47043a70	679a76a2-1e0a-4289-a8e2-b460b9da28af	5	140725686	140725686	G	C	SNP	PCDHGA3	NM_018916.3	human	genbank	58_37c	+1	reviewed	missense	c.2086	p.A696P	1.000	NULL	HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin_2,superfamily_Cadherin-like	-	no_errors
PHF3	0	genome.wustl.edu	37	6	64422754	64422754	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D8-A1XV-01A-11D-A14K-09	TCGA-D8-A1XV-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a76adfd1-8c89-4c13-b570-5ccc47043a70	679a76a2-1e0a-4289-a8e2-b460b9da28af	6	64422754	64422754	G	T	SNP	PHF3	NM_015153.2	human	genbank	58_37c	+1	provisional	missense	c.5270	p.G1757V	0.959	NULL	HMMSmart_SM00249,HMMPfam_TFIIS_M,superfamily_Elongation factor TFIIS domain 2,superfamily_FYVE/PHD zinc finger,HMMPfam_SPOC,HMMSmart_SM00510,PatternScan_ZF_PHD_1,HMMPfam_PHD	-	no_errors
PLA2R1	0	genome.wustl.edu	37	2	160824180	160824180	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1XV-01A-11D-A14K-09	TCGA-D8-A1XV-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a76adfd1-8c89-4c13-b570-5ccc47043a70	679a76a2-1e0a-4289-a8e2-b460b9da28af	2	160824180	160824180	C	T	SNP	PLA2R1	NM_007366.3	human	genbank	58_37c	-1	validated	missense	c.2774	p.G925D	0.197	HMMPfam_Lectin_C,HMMSmart_SM00034,superfamily_C-type lectin-like,PatternScan_C_TYPE_LECTIN_1	HMMPfam_fn2,HMMSmart_SM00059,PatternScan_FN2_1,HMMSmart_SM00458,HMMPfam_Lectin_C,HMMSmart_SM00034,superfamily_Ricin B-like lectins,superfamily_Kringle-like,superfamily_C-type lectin-like,PatternScan_C_TYPE_LECTIN_1	-	no_errors
PSMA8	0	genome.wustl.edu	37	18	23713974	23713974	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D8-A1XV-01A-11D-A14K-09	TCGA-D8-A1XV-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a76adfd1-8c89-4c13-b570-5ccc47043a70	679a76a2-1e0a-4289-a8e2-b460b9da28af	18	23713974	23713974	C	T	SNP	PSMA8	NM_144662.2	human	genbank	58_37c	+1	validated	silent	c.45	p.D15	0.797	HMMPfam_Proteasome_A_N,PatternScan_PROTEASOME_A,superfamily_N-terminal nucleophile aminohydrolases (Ntn hydrolases)	HMMPfam_Proteasome_A_N,PatternScan_PROTEASOME_A,HMMPfam_Proteasome,superfamily_N-terminal nucleophile aminohydrolases (Ntn hydrolases)	-	no_errors
PTRF	0	genome.wustl.edu	37	17	40575012	40575012	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1XV-01A-11D-A14K-09	TCGA-D8-A1XV-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a76adfd1-8c89-4c13-b570-5ccc47043a70	679a76a2-1e0a-4289-a8e2-b460b9da28af	17	40575012	40575012	G	A	SNP	PTRF	NM_012232.5	human	genbank	58_37c	-1	reviewed	missense	c.104	p.P35L	1.000	NULL	NULL	-	no_errors
REST	0	genome.wustl.edu	37	4	57777582	57777582	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D8-A1XV-01A-11D-A14K-09	TCGA-D8-A1XV-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a76adfd1-8c89-4c13-b570-5ccc47043a70	679a76a2-1e0a-4289-a8e2-b460b9da28af	4	57777582	57777582	G	T	SNP	REST	NM_005612.3	human	genbank	58_37c	+1	reviewed	nonsense	c.778	p.E260*	1.000	HMMSmart_ZnF_C2H2	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
TNFRSF6B	0	genome.wustl.edu	37	20	62328257	62328257	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1XV-01A-11D-A14K-09	TCGA-D8-A1XV-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a76adfd1-8c89-4c13-b570-5ccc47043a70	679a76a2-1e0a-4289-a8e2-b460b9da28af	20	62328257	62328257	G	A	SNP	TNFRSF6B	NM_003823.2	human	genbank	58_37c	+1	reviewed	missense	c.137	p.R46Q	0.522	HMMSmart_TNFR,superfamily_SSF57586	HMMPfam_TNFR_c6,HMMSmart_TNFR,PatternScan_TNFR_NGFR_1,superfamily_SSF57586	-	no_errors
WSCD1	0	genome.wustl.edu	37	17	5984198	5984198	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-D8-A1XV-01A-11D-A14K-09	TCGA-D8-A1XV-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a76adfd1-8c89-4c13-b570-5ccc47043a70	679a76a2-1e0a-4289-a8e2-b460b9da28af	17	5984198	5984198	G	A	SNP	WSCD1	NM_015253.1	human	genbank	58_37c	+1	validated	missense	c.220	p.D74N	0.006	NULL	HMMPfam_WSC,HMMSmart_WSC,superfamily_SSF52540	-	no_errors
ZNF689	0	genome.wustl.edu	37	16	30616444	30616444	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1XV-01A-11D-A14K-09	TCGA-D8-A1XV-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a76adfd1-8c89-4c13-b570-5ccc47043a70	679a76a2-1e0a-4289-a8e2-b460b9da28af	16	30616444	30616444	G	A	SNP	ZNF689	NM_138447.1	human	genbank	58_37c	-1	provisional	missense	c.644	p.S215F	0.998	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
