Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
AADAC	13	genome.wustl.edu	37	3	151535239	151535239	+	Nonsense_Mutation	SNP	C	C	A	rs150521396	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	3	151535239	151535239	C	A	SNP	AADAC	NM_001086.2	human	genbank	58_37c	+1	reviewed	nonsense	c.224	p.S75*	0.994	superfamily_alpha/beta-Hydrolases	PatternScan_LIPASE_GDXG_SER,HMMPfam_Abhydrolase_3,superfamily_alpha/beta-Hydrolases	-	no_errors
AKR7L	246181	genome.wustl.edu	37	1	19595111	19595111	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	1	19595111	19595111	C	T	SNP	AKR7L	NM_201252.3	human	genbank	58_37c	-1	reviewed	missense	c.789	p.M263I	1.000	superfamily_NAD(P)-linked oxidoreductase	HMMPfam_Aldo_ket_red,superfamily_NAD(P)-linked oxidoreductase	-	pseudogene
AQP3	360	genome.wustl.edu	37	9	33443389	33443389	+	Silent	SNP	C	C	G	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	9	33443389	33443389	C	G	SNP	AQP3	NM_004925.3	human	genbank	58_37c	-1	reviewed	silent	c.303	p.L101	0.991	HMMPfam_MIP,superfamily_Aquaporin-like	HMMPfam_MIP,PatternScan_MIP,superfamily_Aquaporin-like	-	no_errors
ASB15	142685	genome.wustl.edu	37	7	123269363	123269363	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	7	123269363	123269363	G	A	SNP	ASB15	NM_080928.3	human	genbank	58_37c	+1	validated	missense	c.1315	p.G439S	1.000	superfamily_Ankyrin repeat	HMMPfam_SOCS_box,HMMSmart_SM00253,HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat	-	no_errors
ATP11A	23250	genome.wustl.edu	37	13	113474225	113474225	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	13	113474225	113474225	G	A	SNP	ATP11A	NM_032189.3	human	genbank	58_37c	+1	reviewed	missense	c.686	p.R229H	1.000	superfamily_Calcium ATPase transduction domain A,superfamily_Calcium ATPase transmembrane domain M	HMMPfam_E1-E2_ATPase,PatternScan_ATPASE_E1_E2,superfamily_HAD-like,superfamily_Calcium ATPase transduction domain A,superfamily_Metal cation-transporting ATPase ATP-binding domain N,superfamily_Calcium ATPase transmembrane domain M	-	no_errors
CRLF3	51379	genome.wustl.edu	37	17	29123274	29123274	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	17	29123274	29123274	G	A	SNP	CRLF3	NM_015986.3	human	genbank	58_37c	-1	validated	silent	c.507	p.D169	1.000	NULL	HMMPfam_fn3,HMMSmart_FN3,superfamily_FN_III-like	-	no_errors
CXorf57	55086	genome.wustl.edu	37	X	105905447	105905447	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	X	105905447	105905447	G	A	SNP	CXorf57	NM_018015.5	human	genbank	58_37c	+1	validated	silent	c.2181	p.A727	0.707	NULL	superfamily_Nucleic acid-binding proteins	-	no_errors
DGKB	1607	genome.wustl.edu	37	7	14797340	14797340	+	Silent	SNP	T	T	C	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	7	14797340	14797340	T	C	SNP	DGKB	NM_004080.2	human	genbank	58_37c	-1	reviewed	silent	c.87	p.L29	1.000	superfamily_EF-hand	HMMPfam_DAGK_acc,HMMSmart_SM00045,HMMPfam_DAGK_cat,HMMSmart_SM00046,HMMSmart_SM00054,HMMPfam_C1_1,HMMSmart_SM00109,PatternScan_ZF_DAG_PE_1,PatternScan_EF_HAND_1,HMMPfam_efhand,superfamily_EF-hand,superfamily_Cysteine-rich domain	-	no_errors
ERCC6L	54821	genome.wustl.edu	37	X	71425081	71425081	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	X	71425081	71425081	G	T	SNP	ERCC6L	NM_017669.2	human	genbank	58_37c	-1	validated	missense	c.3536	p.P1179H	0.007	NULL	HMMPfam_SNF2_N,HMMPfam_Helicase_C,HMMSmart_HELICc,HMMSmart_DEXDc,superfamily_SSF52540	-	no_errors
FAT2	2196	genome.wustl.edu	37	5	150946518	150946518	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	5	150946518	150946518	C	A	SNP	FAT2	NM_001447.2	human	genbank	58_37c	-1	reviewed	missense	c.1975	p.V659L	1.000	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like	HMMSmart_SM00282,HMMSmart_SM00179,HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_EGF,HMMSmart_SM00181,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_2,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_Cadherin-like,superfamily_EGF/Laminin	-	no_errors
HGS	9146	genome.wustl.edu	37	17	79662007	79662007	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	17	79662007	79662007	C	T	SNP	HGS	NM_004712.3	human	genbank	58_37c	+1	provisional	silent	c.1029	p.R343	0.036	NULL	HMMPfam_FYVE,HMMSmart_SM00064,HMMPfam_VHS,HMMPfam_UIM,superfamily_ENTH/VHS domain,superfamily_FYVE/PHD zinc finger,HMMSmart_SM00288	-	no_errors
HIST1H2AE	3012	genome.wustl.edu	37	6	26217379	26217379	+	Silent	SNP	G	G	T	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	6	26217379	26217379	G	T	SNP	HIST1H2AE	NM_021052.2	human	genbank	58_37c	+1	reviewed	silent	c.177	p.L59	1.000	HMMSmart_SM00414,HMMPfam_Histone,superfamily_Histone-fold	HMMSmart_SM00414,PatternScan_HISTONE_H2A,HMMPfam_Histone,superfamily_Histone-fold	-	no_errors
HOOK2	29911	genome.wustl.edu	37	19	12876942	12876942	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	19	12876942	12876942	G	A	SNP	HOOK2	NM_013312.2	human	genbank	58_37c	-1	validated	missense	c.1486	p.R496C	0.642	HMMPfam_HOOK	HMMPfam_HOOK	-	no_errors
HRSP12	10247	genome.wustl.edu	37	8	99118536	99118536	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	8	99118536	99118536	C	T	SNP	HRSP12	NM_005836.2	human	genbank	58_37c	-1	validated	missense	c.190	p.E64K	1.000	HMMPfam_Ribonuc_L-PSP,superfamily_YjgF-like	HMMPfam_Ribonuc_L-PSP,superfamily_YjgF-like,PatternScan_UPF0076	-	no_errors
KRI1	65095	genome.wustl.edu	37	19	10670170	10670170	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	19	10670170	10670170	C	T	SNP	KRI1	NM_023008.3	human	genbank	58_37c	-1	validated	silent	c.1077	p.L359	0.997	NULL	HMMPfam_Kri1	-	no_errors
LAMA2	3908	genome.wustl.edu	37	6	129609065	129609065	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	6	129609065	129609065	C	A	SNP	LAMA2	NM_000426.3	human	genbank	58_37c	+1	reviewed	missense	c.2611	p.L871I	1.000	HMMPfam_Laminin_EGF,HMMSmart_EGF_Lam,superfamily_ConA_like_lec_gl,superfamily_SSF57196	HMMPfam_Laminin_B,HMMSmart_LamG,HMMPfam_Laminin_EGF,HMMSmart_EGF_Lam,PatternScan_EGF_LAM_1,HMMPfam_Laminin_N,HMMSmart_LamNT,superfamily_Gal_bind_like,superfamily_ConA_like_lec_gl,HMMPfam_Laminin_I,HMMPfam_Laminin_II,HMMPfam_Laminin_G_1,HMMPfam_Laminin_G_2,PatternScan_EGF_1,PatternScan_EGF_2,HMMSmart_LamB,superfamily_SSF56399,superfamily_SSF57196	-	no_errors
LAMB4	22798	genome.wustl.edu	37	7	107710329	107710329	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	A	A	A	C	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	7	107710329	107710329	A	C	SNP	LAMB4	NM_007356.2	human	genbank	58_37c	-1	validated	missense	c.2126	p.L709R	1.000	NULL	HMMPfam_Laminin_EGF,HMMSmart_SM00180,PatternScan_EGF_LAM_1,HMMPfam_Laminin_N,HMMSmart_SM00136,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_EGF/Laminin	-	no_errors
MUC2	4583	genome.wustl.edu	37	11	1101591	1101591	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	11	1101591	1101591	C	T	SNP	MUC2	NM_002457.2	human	genbank	58_37c	+1	reviewed	missense	c.7592	p.S2531F	0.011	NULL	HMMPfam_VWC,HMMSmart_SM00214,PatternScan_VWFC_1,HMMPfam_VWD,HMMSmart_SM00216,superfamily_Serine proterase inhibitors,HMMSmart_SM00041,PatternScan_CTCK_1,HMMPfam_Cys_knot,HMMSmart_SM00215,superfamily_PMP inhibitors,PatternScan_EGF_1,HMMPfam_C8	-	no_errors
NEK3	4752	genome.wustl.edu	37	13	52707946	52707946	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	13	52707946	52707946	C	T	SNP	NEK3	ENST00000258597	human	ensembl	58_37c	-1	known	missense	c.1318	p.E440K	0.685	NULL	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
PCDH7	5099	genome.wustl.edu	37	4	30921826	30921826	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	4	30921826	30921826	C	T	SNP	PCDH7	NM_032457.3	human	genbank	58_37c	+1	reviewed	nonsense	c.3085	p.Q1029*	1.000	NULL	HMMPfam_Cadherin,HMMSmart_CA,PatternScan_CADHERIN_1,HMMPfam_Cadherin_2,HMMPfam_Protocadherin,superfamily_Cadherin	-	no_errors
PIK3CA	0	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	A	G			TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	3	178952085	178952085	A	G	SNP	PIK3CA	NM_006218.2	human	genbank	58_37c	+1	reviewed	missense	c.3140	p.H1047R	1.000	HMMSmart_PI3Kc,superfamily_Kinase_like	HMMSmart_C2,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,HMMPfam_PI3Ka,HMMSmart_PI3Ka,HMMPfam_PI3K_C2,HMMSmart_PI3K_C2,HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_C2_CaLB,superfamily_Kinase_like,superfamily_ARM-type_fold,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2,superfamily_SSF54236	-	no_errors
PIWIL1	9271	genome.wustl.edu	37	12	130834441	130834441	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	12	130834441	130834441	G	A	SNP	PIWIL1	NM_004764.3	human	genbank	58_37c	+1	reviewed	missense	c.973	p.D325N	1.000	HMMPfam_PAZ,superfamily_PAZ domain	HMMPfam_PAZ,HMMPfam_Piwi,superfamily_Ribonuclease H-like,superfamily_PAZ domain	-	no_errors
POTED	317754	genome.wustl.edu	37	21	15011930	15011930	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	21	15011930	15011930	G	C	SNP	POTED	NM_174981.3	human	genbank	58_37c	+1	validated	missense	c.1504	p.E502Q	0.018	NULL	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat	-	no_errors
POU6F2	11281	genome.wustl.edu	37	7	39500226	39500226	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	7	39500226	39500226	C	T	SNP	POU6F2	NM_007252.3	human	genbank	58_37c	+1	reviewed	missense	c.1483	p.R495C	1.000	HMMPfam_Pou,HMMSmart_SM00352,PatternScan_POU_1,superfamily_lambda repressor-like DNA-binding domains	HMMPfam_Pou,HMMSmart_SM00352,PatternScan_POU_1,PatternScan_POU_2,HMMPfam_Homeobox,HMMSmart_SM00389,superfamily_Homeodomain-like,superfamily_lambda repressor-like DNA-binding domains	-	no_errors
PRR5-ARHGAP8	0	genome.wustl.edu	37	22	45204250	45204250	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	22	45204250	45204250	C	T	SNP	PRR5-ARHGAP8	ENST00000515632	human	ensembl	58_37c	+1	known	missense	c.392	p.T131M	0.996	HMMSmart_SM00516,superfamily_CRAL/TRIO domain	HMMPfam_RhoGAP,HMMSmart_SM00324,HMMSmart_SM00516,superfamily_CRAL/TRIO domain,superfamily_GTPase activation domain GAP,HMMPfam_HbrB	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region
PSMG2	56984	genome.wustl.edu	37	18	12706699	12706699	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	18	12706699	12706699	G	A	SNP	PSMG2	NM_020232.3	human	genbank	58_37c	+1	provisional	missense	c.208	p.E70K	1.000	HMMPfam_HCCA3	HMMPfam_HCCA3	-	no_errors
RAPGEF6	51735	genome.wustl.edu	37	5	130834231	130834231	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	5	130834231	130834231	C	G	SNP	RAPGEF6	NM_016340.5	human	genbank	58_37c	-1	validated	missense	c.1324	p.D442H	1.000	HMMPfam_RasGEF_N,HMMSmart_SM00229,superfamily_Ras GEF	HMMPfam_RA,HMMSmart_SM00314,HMMPfam_cNMP_binding,HMMSmart_SM00100,HMMPfam_RasGEF_N,HMMSmart_SM00229,HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like,HMMPfam_RasGEF,HMMSmart_SM00147,superfamily_Ras GEF,superfamily_cAMP-binding domain-like	-	no_errors
SLCO2A1	6578	genome.wustl.edu	37	3	133661577	133661577	+	Silent	SNP	G	G	A	rs142933499	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	3	133661577	133661577	G	A	SNP	SLCO2A1	NM_005630.2	human	genbank	58_37c	-1	validated	silent	c.1497	p.S499	0.000	HMMPfam_OATP,superfamily_MFS_gen_substrate_transporter	HMMSmart_KAZAL,HMMPfam_OATP,HMMPfam_Kazal_2,superfamily_MFS_gen_substrate_transporter,superfamily_SSF100895	-	no_errors
TEP1	7011	genome.wustl.edu	37	14	20863645	20863645	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	T	T	T	G	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	14	20863645	20863645	T	G	SNP	TEP1	NM_007110.4	human	genbank	58_37c	-1	reviewed	missense	c.1892	p.Q631P	0.774	HMMPfam_TROVE	HMMSmart_SM00320,HMMPfam_NACHT,HMMPfam_TEP1_N,HMMPfam_TROVE,superfamily_WD40 repeat-like,PatternScan_WD_REPEATS_1,HMMPfam_WD40,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
TET2	54790	genome.wustl.edu	37	4	106190828	106190828	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	4	106190828	106190828	C	T	SNP	TET2	NM_001127208.1	human	genbank	58_37c	+1	validated	missense	c.4106	p.S1369L	1.000	NULL	NULL	-	no_errors
UBC	7316	genome.wustl.edu	37	12	125396964	125396964	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	12	125396964	125396964	G	A	SNP	UBC	NM_021009.4	human	genbank	58_37c	-1	validated	missense	c.1354	p.R452C	1.000	HMMPfam_ubiquitin,HMMSmart_SM00213,superfamily_Ubiquitin-like	HMMPfam_ubiquitin,HMMSmart_SM00213,PatternScan_UBIQUITIN_1,superfamily_Ubiquitin-like	-	no_errors
USP8	9101	genome.wustl.edu	37	15	50782646	50782646	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	15	50782646	50782646	C	G	SNP	USP8	NM_001128610.1	human	genbank	58_37c	+1	validated	missense	c.2158	p.P720A	1.000	NULL	HMMPfam_UCH,HMMPfam_Rhodanese,HMMSmart_RHOD,superfamily_Rhodanese-like,HMMPfam_DUF1873,PatternScan_UCH_2_1,PatternScan_UCH_2_2,superfamily_SSF54001	-	no_errors
VPS13A	23230	genome.wustl.edu	37	9	79931137	79931137	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	9	79931137	79931137	A	G	SNP	VPS13A	NM_033305.2	human	genbank	58_37c	+1	reviewed	missense	c.4678	p.N1560D	1.000	NULL	HMMPfam_DUF1162	-	no_errors
WDFY3	23001	genome.wustl.edu	37	4	85657344	85657347	+	Frame_Shift_Del	DEL	ATTA	ATTA	-	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	ATTA	ATTA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	4	85657344	85657347	ATTA	-	DEL	WDFY3	NM_014991.4	human	genbank	58_37c	-1	reviewed	frame_shift_del	c.6894_6891	p.K2299fs	0.710:0.668:0.549:0.236	NULL	HMMPfam_FYVE,HMMSmart_SM00064,HMMPfam_Beach,superfamily_BEACH domain,HMMSmart_SM00320,superfamily_Concanavalin A-like lectins/glucanases,superfamily_FYVE/PHD zinc finger,superfamily_Cyclin-like,superfamily_WD40 repeat-like,superfamily_ARM repeat,PatternScan_WD_REPEATS_1,HMMPfam_WD40,superfamily_PH domain-like	-	no_errors
ZBTB3	79842	genome.wustl.edu	37	11	62520584	62520584	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	11	62520584	62520584	C	T	SNP	ZBTB3	NM_024784.3	human	genbank	58_37c	-1	validated	missense	c.703	p.D235N	0.983	NULL	HMMSmart_BTB,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,superfamily_BTB/POZ_fold,HMMPfam_BTB,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
ZNF525	170958	genome.wustl.edu	37	19	53884186	53884186	+	Silent	SNP	A	A	G	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	19	53884186	53884186	A	G	SNP	ZNF525	ENST00000474037	human	ensembl	58_37c	+1	known	silent	c.354	p.K118	0.001	NULL	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZNF563	147837	genome.wustl.edu	37	19	12432110	12432110	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	19	12432110	12432110	T	C	SNP	ZNF563	NM_145276.2	human	genbank	58_37c	-1	validated	missense	c.167	p.Y56C	0.371	HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352)	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZNF571	51276	genome.wustl.edu	37	19	38055672	38055672	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	19	38055672	38055672	G	T	SNP	ZNF571	NM_016536.3	human	genbank	58_37c	-1	validated	missense	c.1658	p.T553N	0.994	superfamily_SSF57667	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
ZNF85	7639	genome.wustl.edu	37	19	21131813	21131813	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	19	21131813	21131813	G	C	SNP	ZNF85	NM_003429.3	human	genbank	58_37c	+1	validated	missense	c.493	p.E165Q	0.033	superfamily_C2H2 and C2HC zinc fingers	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),PatternScan_ZINC_PROTEASE,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
