Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ABCA13	154664	genome.wustl.edu	37	7	48338055	48338055	+	Missense_Mutation	SNP	A	A	T	rs186758618	by1000genomes	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	7	48338055	48338055	A	T	SNP	ABCA13	NM_152701.3	human	genbank	58_37c	+1	reviewed	missense	c.9292	p.I3098F	0.006	NULL	HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
ADRA2B	151	genome.wustl.edu	37	2	96780849	96780849	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	2	96780849	96780849	C	T	SNP	ADRA2B	ENST00000409345	human	ensembl	58_37c	-1	known	missense	c.1040	p.G347D	0.001	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
AGBL3	340351	genome.wustl.edu	37	7	134717625	134717625	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	7	134717625	134717625	G	A	SNP	AGBL3	NM_178563.3	human	genbank	58_37c	+1	provisional	missense	c.449	p.R150Q	1.000	NULL	HMMPfam_Peptidase_M14,superfamily_Zn-dependent exopeptidases	-	no_errors
ANGPT1	284	genome.wustl.edu	37	8	108334142	108334142	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	8	108334142	108334142	G	C	SNP	ANGPT1	NM_001146.3	human	genbank	58_37c	-1	reviewed	missense	c.790	p.L264V	1.000	NULL	HMMPfam_Fibrinogen_C,HMMSmart_SM00186,PatternScan_FIBRIN_AG_C_DOMAIN,superfamily_Fibrinogen C-terminal domain-like	-	no_errors
AP2M1	1173	genome.wustl.edu	37	3	183896904	183896904	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	3	183896904	183896904	C	A	SNP	AP2M1	NM_004068.3	human	genbank	58_37c	+1	reviewed	missense	c.334	p.L112M	1.000	superfamily_SNARE-like	HMMPfam_Adap_comp_sub,superfamily_Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor,superfamily_SNARE-like,PatternScan_CLAT_ADAPTOR_M_1,PatternScan_CLAT_ADAPTOR_M_2	-	no_errors
ARAP3	64411	genome.wustl.edu	37	5	141051178	141051178	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	5	141051178	141051178	T	C	SNP	ARAP3	NM_022481.5	human	genbank	58_37c	-1	reviewed	missense	c.1813	p.K605E	0.977	HMMPfam_ArfGap,HMMSmart_ArfGap,superfamily_ArfGAP	HMMPfam_RA,HMMPfam_RhoGAP,HMMSmart_RhoGAP,HMMPfam_ArfGap,HMMSmart_ArfGap,superfamily_ArfGAP,HMMSmart_SAM,HMMPfam_PH,HMMSmart_PH,superfamily_Rho_GAP,superfamily_SAM_homology,HMMPfam_SAM_2,superfamily_SSF50729	-	no_errors
ASL	435	genome.wustl.edu	37	7	65547366	65547366	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	7	65547366	65547366	G	C	SNP	ASL	NM_000048.3	human	genbank	58_37c	+1	reviewed	missense	c.219	p.E73D	1.000	HMMPfam_Lyase_1,superfamily_L-Aspartase-like	HMMPfam_Lyase_1,superfamily_L-Aspartase-like,PatternScan_FUMARATE_LYASES	-	no_errors
ATP13A4	84239	genome.wustl.edu	37	3	193188758	193188758	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	3	193188758	193188758	C	G	SNP	ATP13A4	NM_032279.2	human	genbank	58_37c	-1	validated	missense	c.833	p.R278P	0.294	HMMPfam_E1-E2_ATPase,superfamily_Calcium ATPase transduction domain A,superfamily_Calcium ATPase transmembrane domain M	HMMPfam_Cation_ATPase_N,HMMPfam_E1-E2_ATPase,PatternScan_ATPASE_E1_E2,superfamily_HAD-like,superfamily_Calcium ATPase transduction domain A,superfamily_Metal cation-transporting ATPase ATP-binding domain N,superfamily_Calcium ATPase transmembrane domain M	-	no_errors
AZGP1	563	genome.wustl.edu	37	7	99565858	99565858	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	7	99565858	99565858	G	A	SNP	AZGP1	NM_001185.3	human	genbank	58_37c	-1	validated	missense	c.533	p.A178V	0.000	HMMPfam_MHC_I,superfamily_MHC antigen-recognition domain	HMMPfam_MHC_I,PatternScan_IG_MHC,HMMPfam_C1-set,HMMSmart_SM00407,superfamily_MHC antigen-recognition domain,superfamily_Immunoglobulin	-	no_errors
BCORL1	63035	genome.wustl.edu	37	X	129147782	129147782	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	X	129147782	129147782	C	T	SNP	BCORL1	NM_021946.3	human	genbank	58_37c	+1	reviewed	missense	c.1034	p.T345M	0.983	NULL	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat	-	no_errors
BOD1L	259282	genome.wustl.edu	37	4	13606196	13606196	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	4	13606196	13606196	A	T	SNP	BOD1L	NM_148894.2	human	genbank	58_37c	-1	validated	missense	c.2328	p.S776R	1.000	superfamily_SSF81995	HMMPfam_AT_hook,HMMSmart_AT_hook,superfamily_SSF81995	-	no_errors
BRD9	65980	genome.wustl.edu	37	5	865540	865540	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	5	865540	865540	T	A	SNP	BRD9	NM_023924.4	human	genbank	58_37c	-1	validated	missense	c.1394	p.Q465L	0.993	NULL	HMMPfam_Bromodomain,HMMSmart_BROMO,superfamily_Bromodomain	-	no_errors
C10orf71	118461	genome.wustl.edu	37	10	50532560	50532560	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	10	50532560	50532560	G	T	SNP	C10orf71	NM_001135196.1	human	genbank	58_37c	+1	validated	missense	c.1970	p.G657V	0.001	NULL	PatternScan_SUGAR_TRANSPORT_1	-	no_errors
C19orf25	148223	genome.wustl.edu	37	19	1478671	1478671	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	19	1478671	1478671	G	C	SNP	C19orf25	ENST00000427685	human	ensembl	58_37c	-1	known	missense	c.232	p.P78A	0.002	NULL	NULL	-	no_errors
C20orf117	140710	genome.wustl.edu	37	20	35406195	35406195	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	20	35406195	35406195	C	A	SNP	C20orf117	NM_199181.2	human	genbank	58_37c	-1	validated	missense	c.3033	p.Q1011H	0.002	NULL	NULL	-	no_errors
C3orf77	375337	genome.wustl.edu	37	3	44283717	44283717	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	3	44283717	44283717	C	A	SNP	C3orf77	NM_001145030.1	human	genbank	58_37c	+1	validated	missense	c.172	p.P58T	0.003	NULL	HMMPfam_PAZ	-	no_errors
C6orf146	222826	genome.wustl.edu	37	6	4077645	4077645	+	Missense_Mutation	SNP	C	C	T	rs149184193	byFrequency	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	6	4077645	4077645	C	T	SNP	C6orf146	NM_173563.1	human	genbank	58_37c	-1	predicted	missense	c.4	p.G2R	0.233	NULL	NULL	-	no_errors
C7orf11	136647	genome.wustl.edu	37	7	40172716	40172716	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	7	40172716	40172716	C	G	SNP	C7orf11	NM_138701.3	human	genbank	58_37c	-1	reviewed	missense	c.482	p.S161T	1.000	NULL	NULL	-	no_errors
C7orf60	154743	genome.wustl.edu	37	7	112462311	112462311	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	7	112462311	112462311	C	A	SNP	C7orf60	NM_152556.2	human	genbank	58_37c	-1	validated	nonsense	c.706	p.E236*	1.000	NULL	NULL	-	no_errors
CACNA1F	778	genome.wustl.edu	37	X	49076144	49076144	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	X	49076144	49076144	A	G	SNP	CACNA1F	NM_005183.2	human	genbank	58_37c	-1	reviewed	missense	c.2525	p.V842A	1.000	NULL	HMMPfam_Ion_trans,HMMPfam_Ca_chan_IQ,superfamily_Voltage-gated potassium channels	-	no_errors
CASQ1	844	genome.wustl.edu	37	1	160167383	160167383	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	1	160167383	160167383	G	A	SNP	CASQ1	NM_001231.4	human	genbank	58_37c	+1	reviewed	silent	c.789	p.P263	0.231	HMMPfam_Calsequestrin,superfamily_Thiordxn-like_fd	HMMPfam_Calsequestrin,superfamily_Thiordxn-like_fd,PatternScan_CALSEQUESTRIN_1,PatternScan_CALSEQUESTRIN_2	-	no_errors
CCNL2	81669	genome.wustl.edu	37	1	1328842	1328842	+	Splice_Site	SNP	T	T	C	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	1	1328842	1328842	T	C	SNP	CCNL2	NM_030937.4	human	genbank	58_37c	-1	validated	splice_site	c.595-2	e5-2	1.000	-	-	-	no_errors
CD33	945	genome.wustl.edu	37	19	51728821	51728821	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	19	51728821	51728821	T	C	SNP	CD33	NM_001772.3	human	genbank	58_37c	+1	validated	missense	c.385	p.Y129H	0.004	HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin	HMMSmart_SM00409,HMMPfam_V-set,HMMPfam_ig,superfamily_Immunoglobulin	-	no_errors
CDH11	1009	genome.wustl.edu	37	16	65025783	65025783	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	16	65025783	65025783	G	C	SNP	CDH11	NM_001797.2	human	genbank	58_37c	-1	reviewed	missense	c.699	p.H233Q	0.358	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like	HMMPfam_Cadherin_C,HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,superfamily_Cadherin-like	-	no_errors
CHST9	83539	genome.wustl.edu	37	18	24496887	24496887	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	18	24496887	24496887	C	G	SNP	CHST9	NM_031422.4	human	genbank	58_37c	-1	validated	missense	c.668	p.G223A	1.000	HMMPfam_Sulfotransfer_2	HMMPfam_Sulfotransfer_2	-	no_errors
COL18A1	80781	genome.wustl.edu	37	21	46897375	46897375	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	21	46897375	46897375	C	T	SNP	COL18A1	NM_130444.2	human	genbank	58_37c	+1	reviewed	missense	c.2224	p.R742W	0.000	NULL	superfamily_Frizzled cysteine-rich domain,HMMSmart_SM00210,HMMPfam_Collagen,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_DUF959,HMMPfam_Endostatin,superfamily_C-type lectin-like,HMMPfam_Fz,HMMSmart_SM00063	-	no_errors
CPA1	1357	genome.wustl.edu	37	7	130023284	130023284	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	7	130023284	130023284	A	G	SNP	CPA1	NM_001868.2	human	genbank	58_37c	+1	reviewed	missense	c.536	p.H179R	1.000	HMMPfam_Peptidase_M14,HMMSmart_Zn_pept,PatternScan_CARBOXYPEPT_ZN_1,superfamily_SSF53187	HMMPfam_Peptidase_M14,HMMSmart_Zn_pept,PatternScan_CARBOXYPEPT_ZN_1,PatternScan_CARBOXYPEPT_ZN_2,HMMPfam_Propep_M14,superfamily_Prot_inh_propept,superfamily_SSF53187	-	no_errors
CRIM1	51232	genome.wustl.edu	37	2	36623768	36623791	+	In_Frame_Del	DEL	ACTGATGACCAACTGCTTGGTTTT	ACTGATGACCAACTGCTTGGTTTT	-	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	ACTGATGACCAACTGCTTGGTTTT	ACTGATGACCAACTGCTTGGTTTT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	2	36623768	36623791	ACTGATGACCAACTGCTTGGTTTT	-	DEL	CRIM1	NM_016441.1	human	genbank	58_37c	+1	provisional	in_frame_del	c.343_366	p.TDDQLLGF115in_frame_del	1.000:1.000:0.985:1.000:1.000:0.999:1.000:1.000:1.000:1.000:1.000:0.982:1.000:1.000:1.000:1.000:1.000:0.998:1.000:1.000:1.000:1.000:1.000:1.000	NULL	HMMSmart_IB,HMMPfam_VWC,HMMSmart_VWC,PatternScan_VWFC_1,HMMPfam_Antistasin,superfamily_Antihaemostatic	-	no_errors
CROCC	9696	genome.wustl.edu	37	1	17266458	17266458	+	Nonsense_Mutation	SNP	G	G	T	rs145642834	byFrequency	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	1	17266458	17266458	G	T	SNP	CROCC	NM_014675.3	human	genbank	58_37c	+1	validated	nonsense	c.1678	p.E560*	1.000	NULL	superfamily_Prefoldin	-	no_errors
CROCC	9696	genome.wustl.edu	37	1	17266586	17266586	+	Missense_Mutation	SNP	C	C	A	rs45452999	byFrequency;by1000genomes	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	1	17266586	17266586	C	A	SNP	CROCC	NM_014675.3	human	genbank	58_37c	+1	validated	missense	c.1806	p.S602R	1.000	NULL	superfamily_Prefoldin	-	no_errors
CYSLTR1	10800	genome.wustl.edu	37	X	77528833	77528833	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	X	77528833	77528833	C	A	SNP	CYSLTR1	NM_006639.2	human	genbank	58_37c	-1	reviewed	missense	c.411	p.Q137H	0.997	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
DENND5B	160518	genome.wustl.edu	37	12	31551140	31551140	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	12	31551140	31551140	C	G	SNP	DENND5B	NM_144973.3	human	genbank	58_37c	-1	validated	missense	c.3225	p.L1075F	0.868	NULL	HMMPfam_PLAT,HMMPfam_DENN,HMMSmart_SM00799,HMMPfam_RUN,HMMSmart_SM00593,HMMPfam_dDENN,HMMSmart_SM00801,HMMPfam_uDENN,HMMSmart_SM00800,superfamily_Lipase/lipooxygenase domain (PLAT/LH2 domain)	-	no_errors
DHX30	22907	genome.wustl.edu	37	3	47889002	47889002	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	3	47889002	47889002	G	T	SNP	DHX30	NM_138615.2	human	genbank	58_37c	+1	reviewed	nonsense	c.2086	p.E696*	0.877	HMMPfam_Helicase_C,HMMSmart_SM00490,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_Helicase_C,HMMSmart_SM00490,PatternScan_DEAH_ATP_HELICASE,HMMPfam_HA2,HMMPfam_DUF1605,HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases,superfamily_dsRNA-binding domain-like	-	no_errors
DKK3	27122	genome.wustl.edu	37	11	12023920	12023920	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	11	12023920	12023920	C	T	SNP	DKK3	NM_001018057.1	human	genbank	58_37c	-1	reviewed	missense	c.278	p.S93N	0.978	NULL	HMMPfam_Dickkopf_N	-	no_errors
DST	667	genome.wustl.edu	37	6	56473155	56473155	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	6	56473155	56473155	A	C	SNP	DST	ENST00000370769	human	ensembl	58_37c	-1	known	missense	c.5638	p.L1880V	0.046	HMMPfam_Plectin,HMMSmart_SM00250,superfamily_Plakin repeat	PatternScan_RIBOSOMAL_L23,HMMPfam_Plectin,HMMSmart_SM00250,PatternScan_ACTININ_1,PatternScan_ACTININ_2,HMMPfam_CH,HMMSmart_SM00033,HMMPfam_Spectrin,HMMSmart_SM00054,HMMPfam_GAS2,HMMSmart_SM00243,superfamily_Calponin-homology domain CH-domain,HMMSmart_SM00150,PatternScan_EF_HAND_1,HMMPfam_efhand,superfamily_Spectrin repeat,superfamily_EF-hand,superfamily_Plakin repeat	-	no_errors
EIF3M	10480	genome.wustl.edu	37	11	32608625	32608625	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	11	32608625	32608625	G	C	SNP	EIF3M	NM_006360.3	human	genbank	58_37c	+1	provisional	missense	c.110	p.G37A	1.000	NULL	"HMMPfam_PCI,HMMSmart_SM00088,superfamily_""Winged helix"" DNA-binding domain"	-	no_errors
ENSG00000204455	0	genome.wustl.edu	37	11	89595597	89595597	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	11	89595597	89595597	C	A	SNP	ENSG00000204455	ENST00000311917	human	ensembl	58_37c	+1	known	missense	c.928	p.H310N	0.002	NULL	HMMPfam_zf-B_box,HMMSmart_BBOX,HMMSmart_RING,HMMPfam_SPRY,PatternScan_ZF_RING_1,HMMPfam_zf-C3HC4,superfamily_SSF57850	-	no_errors
ENSG00000214564	0	genome.wustl.edu	37	10	75482195	75482195	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	10	75482195	75482195	C	T	SNP	BMS1P4	NR_026592.2	human	genbank	58_37c	-1	provisional	rna	NULL	NULL	0.998	-	-	-	pseudogene
ENSG00000225665	0	genome.wustl.edu	37	4	121263727	121263727	+	Silent	SNP	C	C	G	rs181254197	by1000genomes	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	4	121263727	121263727	C	G	SNP	SAR1P3	ENST00000434012	human	ensembl	58_37c	+1	known	3_prime_untranslated_region	c.*121263727	NULL	0.393	-	-	-	no_coding_region:pseudogene
ENSG00000246596	0	genome.wustl.edu	37	5	177053328	177053328	+	RNA	SNP	G	G	A	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	5	177053328	177053328	G	A	SNP	LOC202181	NR_026921.1	human	genbank	58_37c	-1	predicted	intronic	c.NULL	NULL	0.000	-	-	-	no_errors
ENSG00000247772	0	genome.wustl.edu	37	11	47377511	47377514	+	RNA	DEL	CACT	CACT	-	rs146503233	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	CACT	CACT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	11	47377511	47377514	CACT	-	DEL	SPI1	NM_001080547.1	human	genbank	58_37c	-1	reviewed	intronic	c.497-417_497-414	e5-414	0.001:0.003:0.003:0.003	-	-	-	no_errors
ENSG00000247772	0	genome.wustl.edu	37	11	47377527	47377527	+	RNA	DEL	C	C	-	rs142497874	byCluster;by1000genomes	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	11	47377527	47377527	C	-	DEL	SPI1	NM_001080547.1	human	genbank	58_37c	-1	reviewed	intronic	c.497-430	e5-430	0.009	-	-	-	no_errors
FAM190B	54462	genome.wustl.edu	37	10	86198279	86198279	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	10	86198279	86198279	A	T	SNP	FAM190B	NM_018999.2	human	genbank	58_37c	+1	validated	missense	c.1880	p.Y627F	1.000	NULL	NULL	-	no_errors
FAM46A	55603	genome.wustl.edu	37	6	82461445	82461445	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	6	82461445	82461445	C	G	SNP	FAM46A	NM_017633.2	human	genbank	58_37c	-1	validated	missense	c.414	p.K138N	1.000	HMMPfam_DUF1693	HMMPfam_DUF1693	-	no_errors
FAM65C	140876	genome.wustl.edu	37	20	49208955	49208955	+	Missense_Mutation	SNP	C	C	G	rs77093450	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	20	49208955	49208955	C	G	SNP	FAM65C	NM_080829.2	human	genbank	58_37c	-1	predicted	missense	c.2491	p.G831R	0.984	NULL	NULL	-	no_errors
FCAMR	83953	genome.wustl.edu	37	1	207132061	207132061	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	1	207132061	207132061	G	A	SNP	FCAMR	ENST00000367087	human	ensembl	58_37c	-1	known	missense	c.1408	p.L470F	0.000	NULL	HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin	-	no_errors
FIG4	9896	genome.wustl.edu	37	6	110107520	110107520	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	6	110107520	110107520	A	T	SNP	FIG4	NM_014845.5	human	genbank	58_37c	+1	reviewed	missense	c.1964	p.N655I	1.000	NULL	HMMPfam_Syja_N	-	no_errors
FOLH1	2346	genome.wustl.edu	37	11	49190796	49190796	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	11	49190796	49190796	G	A	SNP	FOLH1	NM_004476.1	human	genbank	58_37c	-1	reviewed	silent	c.1323	p.L441	0.998	HMMPfam_Peptidase_M28,superfamily_Zn-dependent exopeptidases	HMMPfam_PA,HMMPfam_TFR_dimer,superfamily_Transferrin receptor ectodomain C-terminal domain,HMMPfam_Peptidase_M28,superfamily_Transferrin receptor ectodomain apical domain,superfamily_Zn-dependent exopeptidases	-	no_errors
FTSJD1	55783	genome.wustl.edu	37	16	71319781	71319781	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	16	71319781	71319781	G	C	SNP	FTSJD1	NM_001099642.1	human	genbank	58_37c	-1	validated	missense	c.43	p.P15A	0.001	NULL	HMMPfam_FtsJ,superfamily_S-adenosyl-L-methionine-dependent methyltransferases	-	no_errors
GALNT9	50614	genome.wustl.edu	37	12	132862937	132862937	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	12	132862937	132862937	G	C	SNP	GALNT9	ENST00000328957	human	ensembl	58_37c	-1	known	missense	c.318	p.D106E	1.000	NULL	HMMPfam_Ricin_B_lectin,HMMSmart_SM00458,HMMPfam_Glycos_transf_2,PatternScan_WW_DOMAIN_1,superfamily_Ricin B-like lectins,superfamily_Nucleotide-diphospho-sugar transferases	-	no_errors
GALNTL5	168391	genome.wustl.edu	37	7	151716746	151716746	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	7	151716746	151716746	C	T	SNP	GALNTL5	NM_145292.3	human	genbank	58_37c	+1	validated	nonsense	c.1192	p.R398*	0.001	superfamily_Nucleotide-diphospho-sugar transferases	HMMPfam_Glycos_transf_2,superfamily_Nucleotide-diphospho-sugar transferases	-	no_errors
GBF1	8729	genome.wustl.edu	37	10	104128052	104128052	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	10	104128052	104128052	G	T	SNP	GBF1	NM_004193.1	human	genbank	58_37c	+1	provisional	missense	c.2717	p.R906L	1.000	NULL	HMMPfam_Sec7,HMMSmart_Sec7,superfamily_Sec7	-	no_errors
GGTLC1	92086	genome.wustl.edu	37	20	23966412	23966412	+	Silent	SNP	G	G	T	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	20	23966412	23966412	G	T	SNP	GGTLC1	NM_178311.2	human	genbank	58_37c	-1	reviewed	silent	c.423	p.I141	1.000	HMMPfam_G_glu_transpept	HMMPfam_G_glu_transpept,PatternScan_G_GLU_TRANSPEPTIDASE	-	no_errors
GK5	256356	genome.wustl.edu	37	3	141890304	141890304	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	3	141890304	141890304	C	G	SNP	GK5	NM_001039547.2	human	genbank	58_37c	-1	validated	missense	c.1264	p.E422Q	1.000	HMMPfam_FGGY_C,superfamily_Actin-like ATPase domain	PatternScan_FGGY_KINASES_2,HMMPfam_FGGY_N,HMMPfam_FGGY_C,superfamily_Actin-like ATPase domain	-	no_errors
GPR137B	7107	genome.wustl.edu	37	1	236341802	236341802	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	1	236341802	236341802	T	C	SNP	GPR137B	NM_003272.3	human	genbank	58_37c	+1	validated	missense	c.553	p.W185R	0.449	NULL	NULL	-	no_errors
GREB1L	80000	genome.wustl.edu	37	18	19020262	19020262	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	18	19020262	19020262	C	T	SNP	GREB1L	NM_001142966.1	human	genbank	58_37c	+1	provisional	nonsense	c.982	p.R328*	1.000	NULL	PatternScan_ASP_PROTEASE	-	no_errors
GRIA3	2892	genome.wustl.edu	37	X	122538638	122538638	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	X	122538638	122538638	T	C	SNP	GRIA3	ENST00000264357	human	ensembl	58_37c	+1	known	missense	c.1373	p.L458P	1.000	HMMSmart_SM00079,HMMPfam_Lig_chan-Glu_bd,superfamily_Periplasmic binding protein-like II	HMMPfam_Lig_chan,HMMSmart_SM00079,HMMPfam_ANF_receptor,HMMPfam_Lig_chan-Glu_bd,superfamily_Periplasmic binding protein-like I,superfamily_Periplasmic binding protein-like II	-	no_errors
HLA-DMB	3109	genome.wustl.edu	37	6	32905029	32905029	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	6	32905029	32905029	G	T	SNP	HLA-DMB	NM_002118.3	human	genbank	58_37c	-1	reviewed	missense	c.542	p.A181D	0.826	HMMPfam_C1-set,HMMSmart_IGc1,superfamily_SSF48726	HMMPfam_MHC_II_beta,PatternScan_IG_MHC,HMMPfam_C1-set,HMMSmart_IGc1,superfamily_MHC_I/II-like_Ag-recog,superfamily_SSF48726	-	no_errors
HNRNPF	3185	genome.wustl.edu	37	10	43883017	43883017	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	10	43883017	43883017	C	T	SNP	HNRNPF	NM_001098204.1	human	genbank	58_37c	-1	reviewed	missense	c.316	p.D106N	0.978	superfamily_RNA-binding domain RBD	HMMPfam_RRM_1,HMMSmart_SM00360,HMMPfam_zf-RNPHF,superfamily_RNA-binding domain RBD	-	no_errors
HOMER2	9455	genome.wustl.edu	37	15	83523466	83523466	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	15	83523466	83523466	G	T	SNP	HOMER2	NM_199330.1	human	genbank	58_37c	-1	reviewed	missense	c.614	p.A205E	0.164	NULL	HMMPfam_WH1,HMMSmart_SM00461,superfamily_PH domain-like	-	no_errors
ITGB2	3689	genome.wustl.edu	37	21	46309979	46309979	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	21	46309979	46309979	A	T	SNP	ITGB2	NM_000211.3	human	genbank	58_37c	-1	reviewed	missense	c.1571	p.V524D	0.004	NULL	HMMSmart_VWA,HMMPfam_Integrin_beta,HMMSmart_INB,HMMSmart_PSI,HMMPfam_Integrin_B_tail,superfamily_Integrin_bsu_tail,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF_2,HMMPfam_Integrin_b_cyt,PatternScan_INTEGRIN_BETA,superfamily_SSF53300,superfamily_SSF57196,superfamily_SSF69179	-	no_errors
ITIH5L	347365	genome.wustl.edu	37	X	54780124	54780124	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	X	54780124	54780124	G	T	SNP	ITIH5L	NM_198510.2	human	genbank	58_37c	-1	reviewed	missense	c.3312	p.H1104Q	0.001	NULL	HMMPfam_VWA,HMMSmart_VWA,HMMSmart_VIT,HMMPfam_ITI_HC_C,HMMPfam_VIT,superfamily_SSF53300	-	no_errors
KCND3	3752	genome.wustl.edu	37	1	112524764	112524764	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	1	112524764	112524764	G	A	SNP	KCND3	NM_004980.3	human	genbank	58_37c	-1	reviewed	silent	c.585	p.V195	0.991	superfamily_Voltage-gated potassium channels	HMMSmart_SM00225,HMMPfam_K_tetra,HMMPfam_Ion_trans,superfamily_POZ domain,superfamily_Voltage-gated potassium channels	-	no_errors
KGFLP2	654466	genome.wustl.edu	37	9	41962410	41962410	+	RNA	SNP	T	T	A	rs28474905	byCluster;byFrequency	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	9	41962410	41962410	T	A	SNP	KGFLP2	NR_003670.1	human	genbank	58_37c	-1	validated	rna	NULL	NULL	1.000	-	-	-	pseudogene
KHDC1	80759	genome.wustl.edu	37	6	73951884	73951884	+	Silent	SNP	A	A	G	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	6	73951884	73951884	A	G	SNP	KHDC1	NM_030568.3	human	genbank	58_37c	-1	validated	silent	c.189	p.A63	0.007	NULL	NULL	-	no_errors
KIAA1529	57653	genome.wustl.edu	37	9	100092921	100092921	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	9	100092921	100092921	C	G	SNP	KIAA1529	NM_020893.1	human	genbank	58_37c	+1	predicted	missense	c.2695	p.Q899E	0.000	NULL	NULL	-	no_errors
KRTAP5-4	387267	genome.wustl.edu	37	11	1643059	1643059	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	11	1643059	1643059	C	A	SNP	KRTAP5-4	NM_001012709.1	human	genbank	58_37c	-1	provisional	missense	c.265	p.G89W	0.633	NULL	PatternScan_VWFC_1,PatternScan_TNFR_NGFR_1,PatternScan_MOLYBDOPTERIN_PROK_1	-	no_errors
LAT	27040	genome.wustl.edu	37	16	28997485	28997485	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	16	28997485	28997485	C	A	SNP	LAT	NM_014387.3	human	genbank	58_37c	+1	reviewed	missense	c.193	p.P65T	0.027	NULL	NULL	-	no_errors
LCE2B	26239	genome.wustl.edu	37	1	152659424	152659424	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	1	152659424	152659424	G	T	SNP	LCE2B	NM_014357.4	human	genbank	58_37c	+1	reviewed	missense	c.105	p.Q35H	0.360	NULL	NULL	-	no_errors
MAGEB4	4115	genome.wustl.edu	37	X	30260876	30260876	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	X	30260876	30260876	C	G	SNP	MAGEB4	NM_002367.3	human	genbank	58_37c	+1	reviewed	missense	c.624	p.I208M	0.004	HMMPfam_MAGE	HMMPfam_MAGE	-	no_errors
MBNL2	10150	genome.wustl.edu	37	13	97928584	97928584	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	13	97928584	97928584	A	C	SNP	MBNL2	NM_144778.2	human	genbank	58_37c	+1	reviewed	missense	c.95	p.E32A	1.000	HMMPfam_zf-CCCH,HMMSmart_ZnF_C3H1	HMMPfam_zf-CCCH,HMMSmart_ZnF_C3H1	-	no_errors
MBOAT4	619373	genome.wustl.edu	37	8	29990295	29990295	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	8	29990295	29990295	G	A	SNP	MBOAT4	NM_001100916.1	human	genbank	58_37c	-1	validated	missense	c.472	p.H158Y	0.035	HMMPfam_MBOAT	HMMPfam_MBOAT	-	no_errors
MRPL49	740	genome.wustl.edu	37	11	64889852	64889852	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	11	64889852	64889852	G	C	SNP	MRPL49	NM_004927.2	human	genbank	58_37c	+1	reviewed	missense	c.34	p.G12R	0.000	NULL	HMMPfam_Img2	-	no_errors
MTMR12	54545	genome.wustl.edu	37	5	32233994	32233994	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	5	32233994	32233994	G	C	SNP	MTMR12	NM_001040446.1	human	genbank	58_37c	-1	reviewed	missense	c.1559	p.T520S	1.000	superfamily_(Phosphotyrosine protein) phosphatases II	HMMPfam_Myotub-related,superfamily_PH domain-like,superfamily_(Phosphotyrosine protein) phosphatases II	-	no_errors
MUC2	4583	genome.wustl.edu	37	11	1101932	1101932	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	11	1101932	1101932	C	A	SNP	MUC2	NM_002457.2	human	genbank	58_37c	+1	reviewed	missense	c.7684	p.H2562N	0.092	HMMPfam_VWC,HMMSmart_SM00214	HMMPfam_VWC,HMMSmart_SM00214,PatternScan_VWFC_1,HMMPfam_VWD,HMMSmart_SM00216,superfamily_Serine proterase inhibitors,HMMSmart_SM00041,PatternScan_CTCK_1,HMMPfam_Cys_knot,HMMSmart_SM00215,superfamily_PMP inhibitors,PatternScan_EGF_1,HMMPfam_C8	-	no_errors
MUC20	200958	genome.wustl.edu	37	3	195452951	195452951	+	Missense_Mutation	SNP	G	G	C	rs2688542	byCluster;by2Hit2Allele;by1000genomes;byHapmap	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	3	195452951	195452951	G	C	SNP	MUC20	NM_152673.2	human	genbank	58_37c	+1	reviewed	missense	c.964	p.D322H	0.004	NULL	NULL	-	no_errors
MUC4	4585	genome.wustl.edu	37	3	195506037	195506037	+	Silent	SNP	G	G	T	rs78235075	byCluster;by1000genomes	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	3	195506037	195506037	G	T	SNP	MUC4	NM_018406.5	human	genbank	58_37c	-1	reviewed	silent	c.12030	p.S4010	0.012	NULL	HMMPfam_VWD,HMMSmart_SM00216,HMMPfam_NIDO,HMMSmart_SM00539,HMMPfam_AMOP,HMMSmart_SM00723,PatternScan_SUGAR_TRANSPORT_2,HMMSmart_SM00181,PatternScan_EGF_1,superfamily_EGF/Laminin	-	no_errors
MUC4	4585	genome.wustl.edu	37	3	195506775	195506775	+	Silent	SNP	G	G	A	rs79609066	byCluster;byFrequency;by1000genomes	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	3	195506775	195506775	G	A	SNP	MUC4	NM_018406.5	human	genbank	58_37c	-1	reviewed	silent	c.11292	p.T3764	0.996	NULL	HMMPfam_VWD,HMMSmart_SM00216,HMMPfam_NIDO,HMMSmart_SM00539,HMMPfam_AMOP,HMMSmart_SM00723,PatternScan_SUGAR_TRANSPORT_2,HMMSmart_SM00181,PatternScan_EGF_1,superfamily_EGF/Laminin	-	no_errors
MUC4	4585	genome.wustl.edu	37	3	195508108	195508108	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	3	195508108	195508108	G	A	SNP	MUC4	NM_018406.5	human	genbank	58_37c	-1	reviewed	missense	c.9959	p.S3320L	0.000	NULL	HMMPfam_VWD,HMMSmart_SM00216,HMMPfam_NIDO,HMMSmart_SM00539,HMMPfam_AMOP,HMMSmart_SM00723,PatternScan_SUGAR_TRANSPORT_2,HMMSmart_SM00181,PatternScan_EGF_1,superfamily_EGF/Laminin	-	no_errors
MUC4	4585	genome.wustl.edu	37	3	195509429	195509429	+	Missense_Mutation	SNP	A	A	G	rs28542401	byCluster;byFrequency;by1000genomes	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	3	195509429	195509429	A	G	SNP	MUC4	NM_018406.5	human	genbank	58_37c	-1	reviewed	missense	c.8638	p.S2880P	0.971	NULL	HMMPfam_VWD,HMMSmart_SM00216,HMMPfam_NIDO,HMMSmart_SM00539,HMMPfam_AMOP,HMMSmart_SM00723,PatternScan_SUGAR_TRANSPORT_2,HMMSmart_SM00181,PatternScan_EGF_1,superfamily_EGF/Laminin	-	no_errors
NBPF12	440675	genome.wustl.edu	37	1	146408106	146408107	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	1	146408106	146408107	-	A	INS	NBPF12	ENST00000442909	human	ensembl	58_37c	+1	known	frame_shift_ins	c.1740_1741	p.E581fs	0.000:0.001	NULL	HMMPfam_DUF1220,superfamily_GAT-like domain	-	no_errors
NDST4	64579	genome.wustl.edu	37	4	115791933	115791933	+	Silent	SNP	A	A	G	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	4	115791933	115791933	A	G	SNP	NDST4	NM_022569.1	human	genbank	58_37c	-1	provisional	silent	c.1710	p.P570	1.000	superfamily_SSF52540	HMMPfam_Sulfotransfer_1,superfamily_SSF52540	-	no_errors
NEB	4703	genome.wustl.edu	37	2	152527544	152527544	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	2	152527544	152527544	A	T	SNP	NEB	NM_004543.4	human	genbank	58_37c	-1	reviewed	missense	c.4499	p.L1500Q	1.000	HMMPfam_Nebulin,HMMSmart_SM00227	HMMPfam_Nebulin,HMMSmart_SM00227,HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain	-	no_errors
NEBL	10529	genome.wustl.edu	37	10	21097581	21097581	+	Silent	SNP	C	C	A	rs140803920	byCluster;by1000genomes	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	10	21097581	21097581	C	A	SNP	NEBL	NM_006393.2	human	genbank	58_37c	-1	reviewed	silent	c.2619	p.A873	0.749	NULL	HMMPfam_Nebulin,HMMSmart_SM00227,HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain	-	no_errors
NES	10763	genome.wustl.edu	37	1	156640029	156640029	+	Silent	SNP	T	T	C	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	1	156640029	156640029	T	C	SNP	NES	NM_006617.1	human	genbank	58_37c	-1	reviewed	silent	c.3951	p.G1317	0.971	NULL	HMMPfam_Filament,PatternScan_IF	-	no_errors
NME7	29922	genome.wustl.edu	37	1	169292459	169292459	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	1	169292459	169292459	T	G	SNP	NME7	NM_013330.3	human	genbank	58_37c	-1	validated	missense	c.174	p.E58D	0.999	HMMSmart_SM00676	HMMPfam_NDK,HMMSmart_SM00562,superfamily_Nucleoside diphosphate kinases,HMMSmart_SM00676	-	no_errors
NTRK3	4916	genome.wustl.edu	37	15	88678619	88678619	+	Missense_Mutation	SNP	C	C	G	rs148888023	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	15	88678619	88678619	C	G	SNP	NTRK3	NM_001012338.1	human	genbank	58_37c	-1	reviewed	missense	c.917	p.R306P	0.210	superfamily_Immunoglobulin	HMMPfam_LRRNT,HMMSmart_SM00013,HMMSmart_SM00082,HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMPfam_LRR_1,PatternScan_RECEPTOR_TYR_KIN_II,HMMSmart_SM00220,HMMSmart_SM00409,PatternScan_PROTEIN_KINASE_TYR,superfamily_Protein kinase-like (PK-like),HMMPfam_I-set,HMMPfam_ig,PatternScan_PROTEIN_KINASE_ATP,superfamily_Immunoglobulin,superfamily_L domain-like	-	no_errors
OBSCN	84033	genome.wustl.edu	37	1	228506947	228506947	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	1	228506947	228506947	G	A	SNP	OBSCN	NM_001098623.1	human	genbank	58_37c	+1	reviewed	missense	c.14494	p.A4832T	0.375	NULL	HMMPfam_IQ,HMMSmart_SM00015,HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_DBL homology domain (DH-domain),HMMSmart_SM00219,HMMPfam_PH,HMMSmart_SM00233,HMMSmart_SM00220,HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,PatternScan_PROTEIN_KINASE_TYR,PatternScan_PROTEIN_KINASE_ST,superfamily_Fibronectin type III,superfamily_Protein kinase-like (PK-like),HMMPfam_I-set,HMMPfam_V-set,HMMPfam_ig,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,PatternScan_GLYCOSYL_HYDROL_F5,superfamily_Immunoglobulin,superfamily_PH domain-like	-	no_errors
OBSCN	84033	genome.wustl.edu	37	1	228509882	228509882	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	1	228509882	228509882	G	A	SNP	OBSCN	NM_001098623.1	human	genbank	58_37c	+1	reviewed	missense	c.15340	p.E5114K	0.003	NULL	HMMPfam_IQ,HMMSmart_SM00015,HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_DBL homology domain (DH-domain),HMMSmart_SM00219,HMMPfam_PH,HMMSmart_SM00233,HMMSmart_SM00220,HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,PatternScan_PROTEIN_KINASE_TYR,PatternScan_PROTEIN_KINASE_ST,superfamily_Fibronectin type III,superfamily_Protein kinase-like (PK-like),HMMPfam_I-set,HMMPfam_V-set,HMMPfam_ig,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,PatternScan_GLYCOSYL_HYDROL_F5,superfamily_Immunoglobulin,superfamily_PH domain-like	-	no_errors
PFKP	5214	genome.wustl.edu	37	10	3178021	3178021	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	10	3178021	3178021	C	T	SNP	PFKP	NM_002627.3	human	genbank	58_37c	+1	validated	missense	c.2216	p.T739M	1.000	superfamily_Phosphofructokinase	HMMPfam_PFK,superfamily_Phosphofructokinase,PatternScan_PHOSPHOFRUCTOKINASE	-	no_errors
PLXNA2	5362	genome.wustl.edu	37	1	208257821	208257821	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	1	208257821	208257821	C	T	SNP	PLXNA2	NM_025179.3	human	genbank	58_37c	-1	reviewed	silent	c.2202	p.Q734	1.000	NULL	HMMPfam_Sema,HMMSmart_SM00630,superfamily_Sema domain,HMMPfam_PSI,HMMPfam_TIG,HMMSmart_SM00429,HMMSmart_SM00423,superfamily_GTPase activation domain GAP,HMMPfam_Plexin_cytopl,superfamily_E set domains,superfamily_Plexin repeat	-	no_errors
PRKG2	5593	genome.wustl.edu	37	4	82061764	82061764	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	4	82061764	82061764	T	C	SNP	PRKG2	NM_006259.1	human	genbank	58_37c	-1	provisional	missense	c.1467	p.I489M	0.028	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase	HMMPfam_cNMP_binding,HMMSmart_cNMP,HMMSmart_S_TK_X,HMMSmart_S_TKc,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,PatternScan_CNMP_BINDING_1,PatternScan_CNMP_BINDING_2,superfamily_cNMP_binding	-	no_errors
PRPF38B	55119	genome.wustl.edu	37	1	109238924	109238952	+	Frame_Shift_Del	DEL	TGGGACTGGTTTGAATCCTTCCTTGATGA	TGGGACTGGTTTGAATCCTTCCTTGATGA	-	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	TGGGACTGGTTTGAATCCTTCCTTGATGA	TGGGACTGGTTTGAATCCTTCCTTGATGA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	1	109238924	109238952	TGGGACTGGTTTGAATCCTTCCTTGATGA	-	DEL	PRPF38B	NM_018061.2	human	genbank	58_37c	+1	validated	frame_shift_del	c.523_551	p.W175fs	0.999:1.000:1.000:1.000:1.000:0.971:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000	HMMPfam_PRP38	HMMPfam_PRP38	-	no_errors
PRUNE	58497	genome.wustl.edu	37	1	151006389	151006389	+	Silent	SNP	T	T	C	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	1	151006389	151006389	T	C	SNP	PRUNE	NM_021222.1	human	genbank	58_37c	+1	provisional	silent	c.1041	p.S347	0.998	HMMPfam_DHHA2	HMMPfam_DHH,HMMPfam_DHHA2,PatternScan_GLYCOSYL_HYDROL_F5,superfamily_DHH phosphoesterases	-	no_errors
PSMB11	122706	genome.wustl.edu	37	14	23511785	23511785	+	Silent	SNP	G	G	T	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	14	23511785	23511785	G	T	SNP	PSMB11	NM_001099780.1	human	genbank	58_37c	+1	validated	silent	c.351	p.L117	0.642	HMMPfam_Proteasome,superfamily_SSF56235	HMMPfam_Proteasome,PatternScan_PROTEASOME_B,superfamily_SSF56235	-	no_errors
RASGRP2	10235	genome.wustl.edu	37	11	64503109	64503109	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	11	64503109	64503109	G	A	SNP	RASGRP2	NM_001098670.1	human	genbank	58_37c	-1	reviewed	missense	c.1201	p.P401S	0.804	superfamily_Ras GEF	HMMPfam_RasGEF_N,HMMSmart_SM00229,HMMPfam_RasGEF,HMMSmart_SM00147,HMMSmart_SM00054,HMMPfam_C1_1,HMMSmart_SM00109,PatternScan_ZF_DAG_PE_1,superfamily_Ras GEF,PatternScan_EF_HAND_1,HMMPfam_efhand,superfamily_EF-hand,superfamily_Cysteine-rich domain	-	no_errors
RBM14	10432	genome.wustl.edu	37	11	66391939	66391939	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	11	66391939	66391939	T	C	SNP	RBM14	NM_006328.3	human	genbank	58_37c	+1	validated	missense	c.592	p.F198L	1.000	NULL	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD	-	no_errors
RBMXL3	139804	genome.wustl.edu	37	X	114425862	114425862	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	X	114425862	114425862	T	C	SNP	RBMXL3	NM_001145346.1	human	genbank	58_37c	+1	validated	missense	c.1858	p.W620R	0.781	NULL	HMMPfam_RRM_1,HMMSmart_RRM,superfamily_SSF54928	-	no_errors
SDK2	54549	genome.wustl.edu	37	17	71426721	71426721	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	17	71426721	71426721	A	T	SNP	SDK2	NM_001144952.1	human	genbank	58_37c	-1	provisional	missense	c.1512	p.D504E	1.000	HMMSmart_SM00409,superfamily_Immunoglobulin	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,HMMPfam_I-set,HMMPfam_ig,superfamily_Immunoglobulin	-	no_errors
SEC16B	89866	genome.wustl.edu	37	1	177917055	177917055	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	1	177917055	177917055	C	G	SNP	SEC16B	NM_033127.2	human	genbank	58_37c	-1	validated	missense	c.1568	p.G523A	1.000	NULL	PatternScan_PHOSPHOPANTETHEINE	-	no_errors
SGPP1	81537	genome.wustl.edu	37	14	64153112	64153112	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	14	64153112	64153112	G	C	SNP	SGPP1	NM_030791.2	human	genbank	58_37c	-1	provisional	missense	c.1037	p.S346C	0.665	NULL	HMMPfam_PAP2,HMMSmart_SM00014,superfamily_Acid phosphatase/Vanadium-dependent haloperoxidase	-	no_errors
SIGLEC9	27180	genome.wustl.edu	37	19	51631731	51631731	+	Silent	SNP	A	A	T	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	19	51631731	51631731	A	T	SNP	SIGLEC9	NM_014441.1	human	genbank	58_37c	+1	provisional	silent	c.1167	p.I389	0.001	NULL	HMMSmart_IG,HMMPfam_V-set,HMMPfam_ig,superfamily_SSF48726	-	no_errors
SLC6A1	6529	genome.wustl.edu	37	3	11070440	11070440	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	3	11070440	11070440	G	-	DEL	SLC6A1	NM_003042.3	human	genbank	58_37c	+1	validated	frame_shift_del	c.1098	p.A367fs	1.000	HMMPfam_SNF	HMMPfam_SNF,PatternScan_NA_NEUROTRAN_SYMP_1,PatternScan_NA_NEUROTRAN_SYMP_2	-	no_errors
SLCO5A1	81796	genome.wustl.edu	37	8	70588856	70588856	+	Silent	SNP	A	A	G	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	8	70588856	70588856	A	G	SNP	SLCO5A1	NM_030958.2	human	genbank	58_37c	-1	reviewed	silent	c.2077	p.L693	0.573	HMMPfam_OATP,superfamily_MFS_gen_substrate_transporter	HMMSmart_KAZAL,HMMPfam_OATP,HMMPfam_Kazal_2,superfamily_MFS_gen_substrate_transporter,superfamily_SSF100895	-	no_errors
SNAP23	8773	genome.wustl.edu	37	15	42805156	42805156	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	15	42805156	42805156	C	G	SNP	SNAP23	NM_003825.2	human	genbank	58_37c	+1	reviewed	missense	c.61	p.L21V	1.000	HMMSmart_SM00397	HMMPfam_SNARE,HMMSmart_SM00397,HMMPfam_SNAP-25	-	no_errors
SRCAP	10847	genome.wustl.edu	37	16	30733960	30733960	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	16	30733960	30733960	G	C	SNP	SRCAP	NM_006662.2	human	genbank	58_37c	+1	validated	missense	c.3783	p.Q1261H	1.000	NULL	HMMPfam_SNF2_N,HMMPfam_Helicase_C,HMMSmart_SM00490,HMMPfam_HSA,HMMSmart_SM00573,HMMSmart_SM00487,HMMPfam_AT_hook,HMMSmart_SM00384,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
STAT5A	6776	genome.wustl.edu	37	17	40460235	40460235	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	17	40460235	40460235	G	A	SNP	STAT5A	NM_003152.3	human	genbank	58_37c	+1	reviewed	missense	c.1946	p.R649Q	0.776	HMMPfam_SH2,HMMSmart_SH2,superfamily_SSF55550	HMMPfam_SH2,HMMSmart_SH2,superfamily_P53_like_DNA_bnd,HMMPfam_STAT_int,superfamily_STAT,HMMPfam_STAT_alpha,HMMPfam_STAT_bind,superfamily_SSF55550	-	no_errors
SUGT1	10910	genome.wustl.edu	37	13	53241054	53241054	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	13	53241054	53241054	G	C	SNP	SUGT1	NM_001130912.1	human	genbank	58_37c	+1	reviewed	missense	c.723	p.K241N	1.000	superfamily_HSP20-like chaperones,HMMPfam_CS	HMMPfam_TPR_1,HMMPfam_SGS,superfamily_HSP20-like chaperones,HMMPfam_TPR_2,HMMPfam_CS,HMMSmart_SM00028,superfamily_TPR-like	-	no_errors
SYMPK	8189	genome.wustl.edu	37	19	46321248	46321248	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	19	46321248	46321248	A	T	SNP	SYMPK	NM_004819.2	human	genbank	58_37c	-1	reviewed	missense	c.3050	p.M1017K	1.000	NULL	HMMPfam_HEAT,superfamily_ARM repeat	-	no_errors
TDRD1	56165	genome.wustl.edu	37	10	115986919	115986919	+	Silent	SNP	G	G	C	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	10	115986919	115986919	G	C	SNP	TDRD1	NM_198795.1	human	genbank	58_37c	+1	reviewed	silent	c.3264	p.V1088	1.000	NULL	HMMPfam_zf-MYND,PatternScan_ZF_MYND_1,HMMSmart_TUDOR,HMMPfam_TUDOR,superfamily_SSF63748	-	no_errors
TEX11	56159	genome.wustl.edu	37	X	70073144	70073144	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	X	70073144	70073144	G	A	SNP	TEX11	NM_001003811.1	human	genbank	58_37c	-1	reviewed	missense	c.404	p.A135V	0.311	superfamily_TPR-like	HMMPfam_SPO22,HMMSmart_SM00028,superfamily_TPR-like	-	no_errors
TMEM108	66000	genome.wustl.edu	37	3	133109180	133109180	+	Splice_Site	SNP	T	T	A	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	3	133109180	133109180	T	A	SNP	TMEM108	NM_001136469.1	human	genbank	58_37c	+1	validated	splice_site	c.1605+2	e3+2	1.000	-	-	-	no_errors
TP53	7157	genome.wustl.edu	37	17	7578265	7578265	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	17	7578265	7578265	A	G	SNP	TP53	NM_000546.4	human	genbank	58_37c	-1	reviewed	missense	c.584	p.I195T	1.000	superfamily_p53-like transcription factors,HMMPfam_P53	PatternScan_P53,superfamily_p53-like transcription factors,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain,HMMPfam_P53,HMMPfam_P53_TAD	-	no_errors
TP53BP1	7158	genome.wustl.edu	37	15	43767790	43767790	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	15	43767790	43767790	C	T	SNP	TP53BP1	NM_001141980.1	human	genbank	58_37c	-1	validated	missense	c.1058	p.R353K	0.903	NULL	HMMPfam_BRCT,HMMSmart_BRCT,superfamily_BRCT,HMMPfam_53-BP1_Tudor,superfamily_SSF63748	-	no_errors
UPB1	51733	genome.wustl.edu	37	22	24909455	24909455	+	Splice_Site	SNP	T	T	A	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	22	24909455	24909455	T	A	SNP	UPB1	NM_016327.2	human	genbank	58_37c	+1	reviewed	splice_site	c.621+2	e5+2	1.000	-	-	-	no_errors
USP34	9736	genome.wustl.edu	37	2	61505421	61505421	+	Splice_Site	SNP	C	C	A	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	2	61505421	61505421	C	A	SNP	USP34	NM_014709.3	human	genbank	58_37c	-1	validated	splice_site	c.5313-1	e41-1	1.000	-	-	-	no_errors
UTP20	27340	genome.wustl.edu	37	12	101723085	101723085	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	12	101723085	101723085	G	T	SNP	UTP20	NM_014503.2	human	genbank	58_37c	+1	validated	missense	c.3275	p.G1092V	1.000	superfamily_ARM repeat	HMMPfam_DRIM,superfamily_ARM repeat	-	no_errors
VSX1	30813	genome.wustl.edu	37	20	25060118	25060118	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	20	25060118	25060118	G	C	SNP	VSX1	NM_014588.4	human	genbank	58_37c	-1	reviewed	missense	c.457	p.L153V	0.761	superfamily_Homeodomain-like	HMMPfam_Homeobox,HMMSmart_SM00389,superfamily_Homeodomain-like,PatternScan_HOMEOBOX_1	-	no_errors
VWA3A	146177	genome.wustl.edu	37	16	22161158	22161158	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	16	22161158	22161158	T	G	SNP	VWA3A	NM_173615.3	human	genbank	58_37c	+1	validated	missense	c.3035	p.L1012R	0.998	HMMPfam_VWA,HMMSmart_SM00327,superfamily_vWA-like	HMMPfam_VWA,HMMSmart_SM00327,superfamily_vWA-like	-	no_errors
WDR66	144406	genome.wustl.edu	37	12	122396206	122396206	+	Missense_Mutation	SNP	G	G	A	rs185099549	by1000genomes	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	12	122396206	122396206	G	A	SNP	WDR66	NM_144668.4	human	genbank	58_37c	+1	validated	missense	c.1759	p.A587T	0.000	superfamily_WD40 repeat-like	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40,superfamily_EF-hand	-	no_errors
ZNF642	339559	genome.wustl.edu	37	1	40945155	40945155	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	1	40945155	40945155	G	C	SNP	ZNF642	NM_198494.2	human	genbank	58_37c	+1	validated	missense	c.122	p.G41A	1.000	NULL	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
ZNF665	79788	genome.wustl.edu	37	19	53668116	53668116	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	19	53668116	53668116	T	G	SNP	ZNF665	NM_024733.3	human	genbank	58_37c	-1	provisional	missense	c.1627	p.K543Q	0.000	HMMPfam_zf-C2H2,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZZZ3	26009	genome.wustl.edu	37	1	78099029	78099029	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	c7212115-1007-40cf-b9b5-7b25e2f5f2a4	7b38de28-3b9d-4a67-bf94-5fd17317d1a9	1	78099029	78099029	G	A	SNP	ZZZ3	NM_015534.4	human	genbank	58_37c	-1	provisional	missense	c.11	p.S4F	1.000	NULL	HMMPfam_ZZ,PatternScan_ZF_ZZ_1,HMMSmart_SM00717,superfamily_Homeodomain-like,HMMPfam_Myb_DNA-binding	-	no_errors
