Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ACCN4	0	genome.wustl.edu	37	2	220402687	220402688	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	2	220402687	220402688	-	G	INS	ACCN4	NM_018674.4	human	genbank	58_37c	+1	reviewed	frame_shift_ins	c.1920_1921	p.V642fs	0.959:1.000	NULL	HMMPfam_ASC,PatternScan_ASC	-	no_errors
ADAMTSL1	0	genome.wustl.edu	37	9	18829842	18829843	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	9	18829842	18829843	-	C	INS	ADAMTSL1	NM_001040272.4	human	genbank	58_37c	+1	validated	frame_shift_ins	c.4116_4117	p.Q1374fs	0.998:1.000	NULL	HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_PLAC,HMMPfam_I-set,HMMPfam_ig,superfamily_Immunoglobulin	-	no_errors
ALG12	0	genome.wustl.edu	37	22	50297990	50297991	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	22	50297990	50297991	-	G	INS	ALG12	NM_024105.3	human	genbank	58_37c	-1	reviewed	frame_shift_ins	c.1157_1156	p.Q386fs	0.074:0.002	HMMPfam_Glyco_transf_22	HMMPfam_Glyco_transf_22	-	no_errors
ANAPC4	0	genome.wustl.edu	37	4	25395932	25395932	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	4	25395932	25395932	G	T	SNP	ANAPC4	NM_013367.2	human	genbank	58_37c	+1	reviewed	nonsense	c.877	p.E293*	1.000	NULL	superfamily_WD40 repeat-like	-	no_errors
ARPP21	0	genome.wustl.edu	37	3	35780862	35780862	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	3	35780862	35780862	G	A	SNP	ARPP21	NM_016300.4	human	genbank	58_37c	+1	validated	silent	c.1698	p.S566	0.270	NULL	HMMPfam_R3H,HMMSmart_SM00393,superfamily_R3H domain	-	no_errors
ART5	0	genome.wustl.edu	37	11	3660979	3660980	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	11	3660979	3660980	-	G	INS	ART5	NM_001079536.1	human	genbank	58_37c	-1	reviewed	frame_shift_ins	c.680_679	p.H227fs	0.986:0.988	HMMPfam_ART,superfamily_ADP-ribosylation	HMMPfam_ART,PatternScan_ART,superfamily_ADP-ribosylation	-	no_errors
ATP10D	0	genome.wustl.edu	37	4	47559697	47559698	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	4	47559697	47559698	-	G	INS	ATP10D	NM_020453.3	human	genbank	58_37c	+1	validated	frame_shift_ins	c.1841_1842	p.L617fs	0.449:0.439	superfamily_HAD-like	HMMPfam_E1-E2_ATPase,HMMPfam_Hydrolase_3,PatternScan_ATPASE_E1_E2,superfamily_HAD-like,superfamily_Calcium ATPase transduction domain A,superfamily_Metal cation-transporting ATPase ATP-binding domain N	-	no_errors
ATP7B	0	genome.wustl.edu	37	13	52511651	52511651	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	13	52511651	52511651	C	T	SNP	ATP7B	NM_000053.2	human	genbank	58_37c	-1	reviewed	silent	c.3864	p.T1288	0.161	HMMPfam_Hydrolase,superfamily_HAD-like,superfamily_Calcium ATPase transmembrane domain M	HMMPfam_Hydrolase,HMMPfam_HMA,superfamily_HMA heavy metal-associated domain,HMMPfam_E1-E2_ATPase,PatternScan_HMA_1,PatternScan_ATPASE_E1_E2,superfamily_HAD-like,superfamily_Calcium ATPase transduction domain A,superfamily_Metal cation-transporting ATPase ATP-binding domain N,superfamily_Calcium ATPase transmembrane domain M	-	no_errors
AXL	0	genome.wustl.edu	37	19	41743932	41743933	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	19	41743932	41743933	-	C	INS	AXL	NM_021913.3	human	genbank	58_37c	+1	reviewed	frame_shift_ins	c.867_868	p.H291fs	0.982:1.000	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III	HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,PatternScan_PROTEIN_KINASE_TYR,superfamily_Fibronectin type III,superfamily_Protein kinase-like (PK-like),HMMPfam_V-set,PatternScan_PROTEIN_KINASE_ATP,superfamily_Immunoglobulin	-	no_errors
BARHL2	0	genome.wustl.edu	37	1	91182376	91182377	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	1	91182376	91182377	-	G	INS	BARHL2	NM_020063.1	human	genbank	58_37c	-1	validated	frame_shift_ins	c.377_376	p.Q126fs	0.999:1.000	NULL	HMMPfam_Homeobox,HMMSmart_HOX,superfamily_Homeodomain_like,PatternScan_HOMEOBOX_1	-	no_errors
BAX	0	genome.wustl.edu	37	19	49458970	49458971	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	19	49458970	49458971	-	G	INS	BAX	NM_004324.3	human	genbank	58_37c	+1	reviewed	frame_shift_ins	c.113_114	p.E41fs	0.585:0.588	superfamily_SSF56854	HMMPfam_Bcl-2,HMMSmart_BCL,PatternScan_BH1,PatternScan_BH2,PatternScan_BH3,superfamily_SSF56854	-	no_errors
BMP1	0	genome.wustl.edu	37	8	22054259	22054260	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	8	22054259	22054260	-	C	INS	BMP1	NM_006129.4	human	genbank	58_37c	+1	reviewed	frame_shift_ins	c.1832_1833	p.N614fs	1.000:1.000	HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain	"PatternScan_ASX_HYDROXYL,HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain,HMMPfam_Astacin,HMMSmart_SM00179,PatternScan_ZINC_PROTEASE,HMMSmart_SM00235,HMMPfam_EGF,HMMSmart_SM00181,PatternScan_EGF_2,HMMPfam_EGF_CA,PatternScan_EGF_CA,superfamily_Metalloproteases (""zincins"") catalytic domain,superfamily_EGF/Laminin"	-	no_errors
BRD8	0	genome.wustl.edu	37	5	137505020	137505021	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	5	137505020	137505021	-	G	INS	BRD8	NM_139199.1	human	genbank	58_37c	-1	reviewed	frame_shift_ins	c.533_532	p.R178fs	1.000:1.000	NULL	HMMPfam_Bromodomain,HMMSmart_SM00297,superfamily_Bromodomain	-	no_errors
C12orf51	0	genome.wustl.edu	37	12	112600859	112600860	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	12	112600859	112600860	-	G	INS	C12orf51	NM_001109662.2	human	genbank	58_37c	-1	validated	frame_shift_ins	c.11841_11840	p.D3948fs	0.555:1.000	HMMPfam_HECT,HMMSmart_SM00119,superfamily_Hect E3 ligase catalytic domain	HMMPfam_HECT,HMMSmart_SM00119,superfamily_Hect E3 ligase catalytic domain	-	no_errors
C19orf69	0	genome.wustl.edu	37	19	41949131	41949132	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	19	41949131	41949132	-	C	INS	C19orf69	NM_001130514.1	human	genbank	58_37c	+1	predicted	frame_shift_ins	c.57_58	p.Q21fs	0.996:0.991	NULL	NULL	-	no_errors
C20orf186	0	genome.wustl.edu	37	20	31671213	31671214	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	20	31671213	31671214	-	C	INS	C20orf186	NM_182519.2	human	genbank	58_37c	+1	validated	frame_shift_ins	c.210_211	p.V73fs	0.020:0.030	NULL	HMMPfam_LBP_BPI_CETP_C,HMMSmart_SM00329,HMMPfam_LBP_BPI_CETP,HMMSmart_SM00328,superfamily_Bactericidal permeability-increasing protein BPI	-	no_errors
C21orf29	0	genome.wustl.edu	37	21	45987772	45987773	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	21	45987772	45987773	-	G	INS	C21orf29	NM_144991.2	human	genbank	58_37c	-1	provisional	frame_shift_ins	c.200_199	p.R67fs	0.067:0.978	HMMSmart_SM00210	HMMSmart_SM00210,HMMPfam_EPTP,superfamily_Concanavalin A-like lectins/glucanases	-	no_errors
C2CD4D	0	genome.wustl.edu	37	1	151810572	151810573	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	1	151810572	151810573	-	G	INS	C2CD4D	NM_001136003.1	human	genbank	58_37c	-1	validated	frame_shift_ins	c.894_893	p.D299fs	0.000:0.001	HMMPfam_C2,HMMSmart_C2,superfamily_C2_CaLB	HMMPfam_C2,HMMSmart_C2,superfamily_C2_CaLB	-	no_errors
CAND2	0	genome.wustl.edu	37	3	12857414	12857414	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	3	12857414	12857414	G	A	SNP	CAND2	NM_012298.2	human	genbank	58_37c	+1	validated	missense	c.1069	p.V357I	0.908	superfamily_ARM-type_fold	HMMPfam_HEAT,HMMPfam_TIP120,superfamily_ARM-type_fold	-	no_errors
CCDC74A	0	genome.wustl.edu	37	2	132287109	132287110	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	2	132287109	132287110	-	G	INS	CCDC74A	ENST00000434330	human	ensembl	58_37c	+1	known	frame_shift_ins	c.125_126	p.Q45fs	0.000:0.000	NULL	NULL	-	no_stop_codon:bad_bp_length_for_coding_region
CDHR2	0	genome.wustl.edu	37	5	176003133	176003134	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	5	176003133	176003134	-	C	INS	CDHR2	NM_017675.4	human	genbank	58_37c	+1	reviewed	frame_shift_ins	c.1141_1142	p.R383fs	0.404:0.405	superfamily_Cadherin	HMMPfam_Cadherin,HMMSmart_CA,PatternScan_CADHERIN_1,superfamily_Cadherin	-	no_errors
CECR2	0	genome.wustl.edu	37	22	18022285	18022286	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	22	18022285	18022286	-	C	INS	CECR2	ENST00000400573	human	ensembl	58_37c	+1	known	frame_shift_ins	c.2387_2388	p.N799fs	0.580:0.581	NULL	HMMPfam_Bromodomain,HMMSmart_BROMO,superfamily_Bromodomain,PatternScan_BROMODOMAIN_1	-	no_errors
CELSR3	0	genome.wustl.edu	37	3	48689914	48689915	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	3	48689914	48689915	-	G	INS	CELSR3	NM_001407.2	human	genbank	58_37c	-1	reviewed	frame_shift_ins	c.5707_5706	p.G1902fs	0.002:0.001	HMMSmart_SM00282,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_2	PatternScan_ASX_HYDROXYL,HMMPfam_GPS,HMMSmart_SM00303,HMMPfam_7tm_2,HMMSmart_SM00282,HMMPfam_HRM,HMMSmart_SM00008,HMMSmart_SM00179,HMMPfam_Laminin_EGF,HMMSmart_SM00180,PatternScan_EGF_LAM_1,HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_EGF,HMMSmart_SM00181,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_2,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_Cadherin-like,PatternScan_G_PROTEIN_RECEP_F2_2,superfamily_EGF/Laminin	-	no_errors
CHD4	0	genome.wustl.edu	37	12	6711207	6711209	+	In_Frame_Del	DEL	CTT	CTT	-	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	CTT	CTT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	12	6711207	6711209	CTT	-	DEL	CHD4	NM_001273.2	human	genbank	58_37c	-1	reviewed	in_frame_del	c.357_355	p.K119in_frame_del	0.999:1.000:1.000	NULL	HMMPfam_SNF2_N,HMMPfam_Chromo,HMMSmart_SM00298,PatternScan_CHROMO_1,HMMPfam_Helicase_C,HMMSmart_SM00490,HMMSmart_SM00249,PatternScan_DEAH_ATP_HELICASE,HMMPfam_DUF1086,HMMPfam_DUF1087,superfamily_FYVE/PHD zinc finger,HMMPfam_CHDCT2,HMMPfam_CHDNT,HMMSmart_SM00487,superfamily_Chromo domain-like,PatternScan_ZF_PHD_1,HMMPfam_PHD,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
CNKSR1	0	genome.wustl.edu	37	1	26514777	26514778	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	1	26514777	26514778	-	C	INS	CNKSR1	NM_006314.2	human	genbank	58_37c	+1	reviewed	frame_shift_ins	c.1507_1508	p.P506fs	0.000:0.000	NULL	superfamily_PDZ domain-like,HMMSmart_SM00454,HMMPfam_PH,HMMSmart_SM00233,superfamily_SAM/Pointed domain,HMMPfam_SAM_2,HMMPfam_CRIC_ras_sig,superfamily_PH domain-like	-	no_errors
CNOT3	0	genome.wustl.edu	37	19	54649666	54649667	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	19	54649666	54649667	-	C	INS	CNOT3	NM_014516.2	human	genbank	58_37c	+1	validated	frame_shift_ins	c.724_725	p.P244fs	1.000:1.000	NULL	HMMPfam_Not3,HMMPfam_NOT2_3_5	-	no_errors
COL4A4	0	genome.wustl.edu	37	2	227896715	227896715	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	2	227896715	227896715	G	A	SNP	COL4A4	NM_000092.4	human	genbank	58_37c	-1	reviewed	missense	c.3763	p.P1255S	0.892	NULL	HMMPfam_C4,HMMSmart_SM00111,HMMPfam_Collagen,superfamily_C-type lectin-like	-	no_errors
COL5A1	0	genome.wustl.edu	37	9	137642389	137642390	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	9	137642389	137642390	-	C	INS	COL5A1	NM_000093.3	human	genbank	58_37c	+1	reviewed	frame_shift_ins	c.1496_1497	p.G502fs	1.000:1.000	HMMPfam_Collagen	HMMPfam_COLFI,HMMSmart_COLFI,HMMSmart_LamG,HMMSmart_TSPN,HMMPfam_Collagen,superfamily_ConA_like_lec_gl,HMMPfam_Laminin_G_2	-	no_errors
CRAT	0	genome.wustl.edu	37	9	131864813	131864814	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	9	131864813	131864814	-	C	INS	CRAT	NM_000755.3	human	genbank	58_37c	-1	reviewed	frame_shift_ins	c.496_495	p.K165fs	0.909:0.127	HMMPfam_Carn_acyltransf,superfamily_CoA-dependent acyltransferases	HMMPfam_Carn_acyltransf,PatternScan_ACYLTRANSF_C_1,PatternScan_ACYLTRANSF_C_2,superfamily_CoA-dependent acyltransferases	-	no_errors
CYB5R4	0	genome.wustl.edu	37	6	84569561	84569562	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	6	84569561	84569562	-	G	INS	CYB5R4	NM_016230.3	human	genbank	58_37c	+1	validated	frame_shift_ins	c.60_61	p.R22fs	0.753:0.969	NULL	HMMPfam_Cyt-b5,superfamily_Cyt_B5,HMMPfam_NAD_binding_1,HMMPfam_FAD_binding_6,superfamily_HSP20_chap,HMMPfam_CS,superfamily_Riboflavin_synthase_like_b-brl,PatternScan_CYTOCHROME_B5_1,superfamily_SSF52343	-	no_errors
DHX9	0	genome.wustl.edu	37	1	182811768	182811768	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	1	182811768	182811768	A	G	SNP	DHX9	NM_001357.4	human	genbank	58_37c	+1	reviewed	missense	c.67	p.I23V	1.000	HMMPfam_dsrm,HMMSmart_SM00358,superfamily_dsRNA-binding domain-like	HMMPfam_dsrm,HMMSmart_SM00358,HMMPfam_Helicase_C,HMMSmart_SM00490,PatternScan_DEAH_ATP_HELICASE,HMMPfam_HA2,HMMPfam_DEAD,HMMPfam_DUF1605,HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases,superfamily_dsRNA-binding domain-like	-	no_errors
DNM2	0	genome.wustl.edu	37	19	10940881	10940882	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	19	10940881	10940882	-	C	INS	DNM2	NM_001005360.1	human	genbank	58_37c	+1	reviewed	frame_shift_ins	c.2370_2371	p.L792fs	0.894:1.000	NULL	HMMPfam_Dynamin_M,HMMPfam_Dynamin_N,HMMSmart_SM00053,HMMPfam_PH,HMMSmart_SM00233,HMMPfam_GED,HMMSmart_SM00302,PatternScan_DYNAMIN,superfamily_PH domain-like,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
ENSG00000198886	0	genome.wustl.edu	37	MT	10773	10773	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	MT	10773	10773	T	C	SNP	ENSG00000198886	ENST00000361381	human	ensembl	58_37c	+1	known	missense	c.14	p.I5T	NULL	HMMPfam_Oxidored_q5_N	HMMPfam_Oxidored_q5_N,HMMPfam_Oxidored_q1	-	no_stop_codon:bad_bp_length_for_coding_region:mismatch_between_exon_seq_and_reference
ENSG00000210082	0	genome.wustl.edu	37	MT	2289	2289	+	RNA	SNP	G	A	A	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	MT	2289	2289	G	A	SNP	ENSG00000210082	ENST00000387347	human	ensembl	58_37c	+1	known	rna	NULL	NULL	NULL	-	-	-	no_errors
ENSG00000210140	0	genome.wustl.edu	37	MT	5773	5773	+	RNA	SNP	G	A	A	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	MT	5773	5773	G	A	SNP	ENSG00000210140	ENST00000387405	human	ensembl	58_37c	-1	novel	rna	NULL	NULL	NULL	-	-	-	no_errors
ENSG00000228637	0	genome.wustl.edu	37	10	42392834	42392835	+	RNA	INS	-	-	G	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	10	42392834	42392835	-	G	INS	ENSG00000228637	ENST00000439345	human	ensembl	58_37c	-1	novel	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors
ENSG00000249665	0	genome.wustl.edu	37	8	86786357	86786357	+	RNA	SNP	C	C	A	rs60098459	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	8	86786357	86786357	C	A	SNP	ENSG00000249665	ENST00000503540	human	ensembl	58_37c	+1	known	rna	NULL	NULL	0.034	-	-	-	no_errors
ENSG00000249705	0	genome.wustl.edu	37	7	65996396	65996398	+	RNA	DEL	ACA	ACA	-	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	ACA	ACA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	7	65996396	65996398	ACA	-	DEL	ENSG00000249705	ENST00000418858	human	ensembl	58_37c	+1	known	rna	NULL	NULL	0.004:0.000:0.000	-	-	-	no_errors
ENSG00000251705	0	genome.wustl.edu	37	Y	10037868	10037868	+	RNA	SNP	G	G	A	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	Y	10037868	10037868	G	A	SNP	ENSG00000251705	ENST00000515896	human	ensembl	58_37c	+1	novel	rna	NULL	NULL	1.000	-	-	-	no_errors
ERCC6	0	genome.wustl.edu	37	10	50690757	50690758	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	10	50690757	50690758	-	C	INS	ERCC6	NM_000124.2	human	genbank	58_37c	-1	reviewed	frame_shift_ins	c.2145_2144	p.Y716fs	0.736:1.000	HMMPfam_SNF2_N	HMMPfam_SNF2_N,HMMPfam_Helicase_C,HMMSmart_HELICc,HMMSmart_DEXDc,superfamily_SSF52540	-	no_errors
FAM178B	0	genome.wustl.edu	37	2	97636500	97636501	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	2	97636500	97636501	-	C	INS	FAM178B	NM_001122646.2	human	genbank	58_37c	-1	validated	frame_shift_ins	c.483_482	p.S162fs	0.024:0.001	NULL	NULL	-	no_errors
FAM40A	0	genome.wustl.edu	37	1	110585774	110585775	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	1	110585774	110585775	-	C	INS	FAM40A	NM_033088.2	human	genbank	58_37c	+1	validated	frame_shift_ins	c.950_951	p.L320fs	0.999:0.006	HMMPfam_N1221	HMMPfam_N1221	-	no_errors
FAT2	0	genome.wustl.edu	37	5	150905451	150905452	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	5	150905451	150905452	-	G	INS	FAT2	NM_001447.2	human	genbank	58_37c	-1	reviewed	frame_shift_ins	c.10384_10383	p.Y3461fs	1.000:0.841	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Concanavalin A-like lectins/glucanases,superfamily_Cadherin-like	HMMSmart_SM00282,HMMSmart_SM00179,HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_EGF,HMMSmart_SM00181,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_2,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_Cadherin-like,superfamily_EGF/Laminin	-	no_errors
FBXW9	0	genome.wustl.edu	37	19	12800973	12800974	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	19	12800973	12800974	-	C	INS	FBXW9	ENST00000380339	human	ensembl	58_37c	-1	known	frame_shift_ins	c.925_924	p.P308fs	0.001:0.002	superfamily_WD40 repeat-like	HMMSmart_SM00320,HMMPfam_F-box,HMMSmart_SM00256,superfamily_WD40 repeat-like,PatternScan_WD_REPEATS_1,HMMPfam_WD40,superfamily_F-box domain	-	no_errors
FLJ43860	0	genome.wustl.edu	37	8	142506589	142506590	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	8	142506589	142506590	-	G	INS	FLJ43860	NM_207414.2	human	genbank	58_37c	-1	validated	frame_shift_ins	c.93_92	p.V32fs	0.000:0.000	NULL	HMMPfam_HEAT,superfamily_ARM repeat	-	pseudogene
FLT3LG	0	genome.wustl.edu	37	19	49982165	49982166	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	19	49982165	49982166	-	C	INS	FLT3LG	NM_001459.2	human	genbank	58_37c	+1	validated	frame_shift_ins	c.344_343	p.S118fs	1.000:1.000	HMMPfam_Flt3_lig,superfamily_4-helical cytokines	HMMPfam_Flt3_lig,superfamily_4-helical cytokines	-	no_errors
FNDC4	0	genome.wustl.edu	37	2	27717516	27717517	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	2	27717516	27717517	-	G	INS	FNDC4	NM_022823.2	human	genbank	58_37c	-1	validated	frame_shift_ins	c.31_30	p.S10fs	0.989:0.915	NULL	HMMPfam_fn3,HMMSmart_FN3,superfamily_FN_III-like	-	no_errors
FOXM1	0	genome.wustl.edu	37	12	2968087	2968088	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	12	2968087	2968088	-	G	INS	FOXM1	NM_202002.1	human	genbank	58_37c	-1	validated	frame_shift_ins	c.2123_2122	p.L708fs	1.000:1.000	NULL	"HMMPfam_Fork_head,HMMSmart_SM00339,PatternScan_FORK_HEAD_1,PatternScan_FORK_HEAD_2,superfamily_""Winged helix"" DNA-binding domain"	-	no_errors
GATA3	0	genome.wustl.edu	37	10	8111496	8111497	+	Frame_Shift_Ins	INS	-	-	GGAG	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	10	8111496	8111497	-	GGAG	INS	GATA3	NM_001002295.1	human	genbank	58_37c	+1	reviewed	frame_shift_ins	c.985_986	p.R331fs	1.000:1.000	HMMPfam_GATA,HMMSmart_SM00401,PatternScan_GATA_ZN_FINGER_1,superfamily_Glucocorticoid receptor-like (DNA-binding domain)	HMMPfam_GATA,HMMSmart_SM00401,PatternScan_GATA_ZN_FINGER_1,superfamily_Glucocorticoid receptor-like (DNA-binding domain)	-	no_errors
GLI3	0	genome.wustl.edu	37	7	42004243	42004244	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	7	42004243	42004244	-	T	INS	GLI3	NM_000168.5	human	genbank	58_37c	-1	reviewed	frame_shift_ins	c.4428_4427	p.N1476fs	1.000:0.993	NULL	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
GLYR1	0	genome.wustl.edu	37	16	4862228	4862229	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	16	4862228	4862229	-	C	INS	GLYR1	NM_032569.3	human	genbank	58_37c	-1	validated	frame_shift_ins	c.1141_1140	p.R380fs	0.990:0.170	HMMPfam_NAD_binding_2,superfamily_NAD(P)-binding Rossmann-fold domains	HMMPfam_PWWP,HMMSmart_SM00293,HMMPfam_NAD_binding_2,superfamily_6-phosphogluconate dehydrogenase C-terminal domain-like,superfamily_NAD(P)-binding Rossmann-fold domains,HMMPfam_AT_hook,superfamily_Tudor/PWWP/MBT	-	no_errors
GPSM2	0	genome.wustl.edu	37	1	109466642	109466643	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	1	109466642	109466643	-	C	INS	GPSM2	NM_013296.4	human	genbank	58_37c	+1	validated	frame_shift_ins	c.1621_1622	p.N543fs	0.975:0.997	NULL	HMMPfam_TPR_1,HMMPfam_GoLoco,HMMSmart_GoLoco,HMMSmart_TPR,superfamily_SSF48452	-	no_errors
HERC1	0	genome.wustl.edu	37	15	63918305	63918306	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	15	63918305	63918306	-	G	INS	HERC1	NM_003922.3	human	genbank	58_37c	-1	reviewed	frame_shift_ins	c.13154_13153	p.Q4385fs	1.000:1.000	NULL	HMMPfam_RCC1,PatternScan_RCC1_2,HMMPfam_HECT,HMMSmart_SM00119,superfamily_Hect E3 ligase catalytic domain,HMMSmart_SM00320,HMMPfam_SPRY,PatternScan_ARGINASE_2,PatternScan_PHOSPHOPANTETHEINE,superfamily_RCC1/BLIP-II,superfamily_WD40 repeat-like,HMMSmart_SM00449,PatternScan_WD_REPEATS_1,HMMPfam_WD40	-	no_errors
HN1L	0	genome.wustl.edu	37	16	1735531	1735531	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	16	1735531	1735531	A	G	SNP	HN1L	NM_144570.2	human	genbank	58_37c	+1	validated	missense	c.136	p.N46D	0.995	NULL	NULL	-	no_errors
HPS1	0	genome.wustl.edu	37	10	100189562	100189563	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	10	100189562	100189563	-	C	INS	HPS1	NM_000195.2	human	genbank	58_37c	-1	reviewed	frame_shift_ins	c.853_852	p.S284fs	0.033:0.007	NULL	NULL	-	no_errors
HSPD1	0	genome.wustl.edu	37	2	198363501	198363501	+	Silent	SNP	C	C	T	rs78187001	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	2	198363501	198363501	C	T	SNP	HSPD1	NM_002156.4	human	genbank	58_37c	-1	reviewed	silent	c.72	p.R24	0.995	NULL	HMMPfam_Cpn60_TCP1,superfamily_GroEL-ATPase,PatternScan_CHAPERONINS_CPN60,superfamily_SSF52029,superfamily_SSF54849	-	no_errors
IGFN1	0	genome.wustl.edu	37	1	201174401	201174402	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	1	201174401	201174402	-	G	INS	IGFN1	ENST00000451870	human	ensembl	58_37c	+1	known	frame_shift_ins	c.1108_1109	p.A372fs	0.884:0.684	HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,HMMPfam_I-set,superfamily_Immunoglobulin	-	no_errors
IGHG3	0	genome.wustl.edu	37	14	106234219	106234219	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	14	106234219	106234219	C	G	SNP	IGHG3	ENST00000390550	human	ensembl	58_37c	-1	known	missense	c.1142	p.R381P	0.951	NULL	PatternScan_IG_MHC,HMMPfam_C1-set,HMMSmart_SM00407,superfamily_Immunoglobulin	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region
IGSF9B	0	genome.wustl.edu	37	11	133815978	133815979	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	11	133815978	133815979	-	G	INS	IGSF9B	NM_014987.1	human	genbank	58_37c	-1	validated	frame_shift_ins	c.240_239	p.H81fs	0.087:1.000	HMMSmart_IG,HMMPfam_V-set,superfamily_SSF48726	HMMSmart_IGc2,HMMSmart_IG,HMMPfam_fn3,HMMSmart_FN3,superfamily_FN_III-like,HMMPfam_I-set,HMMPfam_V-set,superfamily_SSF48726	-	no_errors
ILF3	0	genome.wustl.edu	37	19	10794365	10794366	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	19	10794365	10794366	-	C	INS	ILF3	NM_017620.2	human	genbank	58_37c	+1	reviewed	frame_shift_ins	c.1917_1918	p.N641fs	0.918:0.998	NULL	HMMPfam_dsrm,HMMSmart_SM00358,HMMPfam_DZF,HMMSmart_SM00572,superfamily_dsRNA-binding domain-like	-	no_errors
KAZALD1	0	genome.wustl.edu	37	10	102824102	102824102	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	10	102824102	102824102	C	G	SNP	KAZALD1	NM_030929.4	human	genbank	58_37c	+1	reviewed	missense	c.596	p.P199R	1.000	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin	HMMSmart_SM00280,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_Kazal_2,HMMPfam_I-set,superfamily_Kazal-type serine protease inhibitors,superfamily_Immunoglobulin	-	no_errors
KIAA2022	0	genome.wustl.edu	37	X	73963324	73963324	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	X	73963324	73963324	C	T	SNP	KIAA2022	NM_001008537.2	human	genbank	58_37c	-1	validated	silent	c.1068	p.K356	0.996	NULL	NULL	-	no_errors
KIF13B	0	genome.wustl.edu	37	8	29003919	29003919	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	8	29003919	29003919	G	A	SNP	KIF13B	NM_015254.3	human	genbank	58_37c	-1	validated	silent	c.2163	p.A721	1.000	NULL	HMMPfam_FHA,HMMPfam_CAP_GLY,PatternScan_CAP_GLY_1,HMMPfam_Kinesin,HMMSmart_SM00129,superfamily_SMAD/FHA domain,PatternScan_KINESIN_MOTOR_DOMAIN1,superfamily_P-loop containing nucleoside triphosphate hydrolases,superfamily_Cap-Gly domain	-	no_errors
KIR2DS4	0	genome.wustl.edu	37	19	55350963	55350964	+	Frame_Shift_Ins	INS	-	-	CCCGGAGCTCCTATGACATGTA	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	19	55350963	55350964	-	CCCGGAGCTCCTATGACATGTA	INS	KIR2DS4	ENST00000339924	human	ensembl	58_37c	+1	known	frame_shift_ins	c.451_452	p.I152fs	0.473:0.334	superfamily_Immunoglobulin	HMMPfam_ig,superfamily_Immunoglobulin	-	no_errors
LIMK1	0	genome.wustl.edu	37	7	73535322	73535323	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	7	73535322	73535323	-	C	INS	LIMK1	NM_002314.2	human	genbank	58_37c	+1	reviewed	frame_shift_ins	c.1724_1725	p.S578fs	1.000:1.000	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like)	HMMSmart_SM00219,HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like,HMMPfam_LIM,HMMSmart_SM00132,PatternScan_LIM_DOMAIN_1,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,superfamily_Glucocorticoid receptor-like (DNA-binding domain)	-	no_errors
LOC284685	0	genome.wustl.edu	37	1	166245344	166245344	+	RNA	SNP	G	G	C	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	1	166245344	166245344	G	C	SNP	LOC284685	XR_017685.3	human	genbank	58_37c	-1	model	rna	NULL	NULL	0.001	-	-	-	pseudogene
LOC441416	0	genome.wustl.edu	37	9	44175205	44175206	+	RNA	INS	-	-	C	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	9	44175205	44175206	-	C	INS	LOC441416	XR_016304.2	human	genbank	58_37c	-1	model	rna	NULL	NULL	0.997:0.809	-	-	-	pseudogene
LOC642424	0	genome.wustl.edu	37	10	42681259	42681259	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	10	42681259	42681259	A	G	SNP	LOC642424	XM_001717196.2	human	genbank	58_37c	+1	model	missense	c.724	p.T242A	0.982	NULL	HMMSmart_SM00406,HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin	-	no_errors
LOC643310	0	genome.wustl.edu	37	X	92542797	92542797	+	RNA	SNP	G	G	A	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	X	92542797	92542797	G	A	SNP	LOC643310	XR_038903.2	human	genbank	58_37c	-1	model	rna	NULL	NULL	1.000	-	-	-	pseudogene
LRP2	0	genome.wustl.edu	37	2	169997024	169997025	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	2	169997024	169997025	-	G	INS	LRP2	NM_004525.2	human	genbank	58_37c	-1	reviewed	frame_shift_ins	c.13140_13139	p.C4381fs	1.000:1.000	HMMSmart_EGF,superfamily_SSF57196	HMMPfam_Ldl_recept_b,HMMSmart_LY,PatternScan_ASX_HYDROXYL,HMMSmart_EGF_CA,HMMPfam_Ldl_recept_a,HMMSmart_LDLa,PatternScan_LDLRA_1,superfamily_LDL_rcpt_classA_cys-rich,HMMPfam_EGF,HMMSmart_EGF,superfamily_Grow_fac_recept,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF_CA,PatternScan_EGF_CA,superfamily_SSF57196,superfamily_SSF63825	-	no_errors
LRP4	0	genome.wustl.edu	37	11	46917494	46917495	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	11	46917494	46917495	-	C	INS	LRP4	NM_002334.3	human	genbank	58_37c	-1	reviewed	frame_shift_ins	c.1124_1123	p.A375fs	0.850:0.844	HMMPfam_EGF,HMMSmart_SM00181,superfamily_EGF/Laminin	HMMPfam_Ldl_recept_b,HMMSmart_SM00135,PatternScan_ASX_HYDROXYL,HMMSmart_SM00179,HMMPfam_Ldl_recept_a,HMMSmart_SM00192,PatternScan_LDLRA_1,superfamily_LDL receptor-like module,HMMPfam_EGF,HMMSmart_SM00181,PatternScan_EGF_2,HMMPfam_EGF_CA,PatternScan_EGF_CA,superfamily_EGF/Laminin,superfamily_YWTD domain	-	no_errors
LRRC56	0	genome.wustl.edu	37	11	551227	551228	+	Frame_Shift_Ins	INS	-	-	CC	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	11	551227	551228	-	CC	INS	LRRC56	NM_198075.3	human	genbank	58_37c	+1	validated	frame_shift_ins	c.721_722	p.R245fs	0.000:0.000	superfamily_SSF52075	HMMPfam_LRR_1,HMMSmart_LRRcap,superfamily_SSF52075	-	no_errors
MAP2K4	0	genome.wustl.edu	37	17	11984789	11984790	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	17	11984789	11984790	-	T	INS	MAP2K4	NM_003010.2	human	genbank	58_37c	+1	reviewed	frame_shift_ins	c.335_336	p.Y113fs	1.000:0.997	HMMSmart_S_TKc,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	HMMSmart_S_TKc,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
MAPRE3	0	genome.wustl.edu	37	2	27248516	27248517	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	2	27248516	27248517	-	C	INS	MAPRE3	NM_012326.2	human	genbank	58_37c	+1	reviewed	frame_shift_ins	c.535_536	p.C182fs	0.999:1.000	NULL	HMMPfam_CH,HMMPfam_EB1,superfamily_Calponin-homology domain CH-domain	-	no_errors
MUC2	0	genome.wustl.edu	37	11	1092910	1092910	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	11	1092910	1092910	G	A	SNP	MUC2	NM_002457.2	human	genbank	58_37c	+1	reviewed	missense	c.4729	p.G1577S	0.048	NULL	HMMPfam_VWC,HMMSmart_SM00214,PatternScan_VWFC_1,HMMPfam_VWD,HMMSmart_SM00216,superfamily_Serine proterase inhibitors,HMMSmart_SM00041,PatternScan_CTCK_1,HMMPfam_Cys_knot,HMMSmart_SM00215,superfamily_PMP inhibitors,PatternScan_EGF_1,HMMPfam_C8	-	no_errors
MUC2	0	genome.wustl.edu	37	11	1092971	1092971	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	11	1092971	1092971	C	T	SNP	MUC2	NM_002457.2	human	genbank	58_37c	+1	reviewed	missense	c.4790	p.T1597I	0.001	NULL	HMMPfam_VWC,HMMSmart_SM00214,PatternScan_VWFC_1,HMMPfam_VWD,HMMSmart_SM00216,superfamily_Serine proterase inhibitors,HMMSmart_SM00041,PatternScan_CTCK_1,HMMPfam_Cys_knot,HMMSmart_SM00215,superfamily_PMP inhibitors,PatternScan_EGF_1,HMMPfam_C8	-	no_errors
MYBPC3	0	genome.wustl.edu	37	11	47368187	47368187	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	11	47368187	47368187	C	T	SNP	MYBPC3	NM_000256.3	human	genbank	58_37c	-1	reviewed	missense	c.917	p.R306Q	0.999	NULL	HMMSmart_IGc2,HMMSmart_IG,HMMPfam_fn3,HMMSmart_FN3,superfamily_FN_III-like,HMMPfam_I-set,HMMPfam_ig,superfamily_SSF48726	-	no_errors
NBL1	0	genome.wustl.edu	37	1	19981543	19981544	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	1	19981543	19981544	-	G	INS	NBL1	NM_182744.2	human	genbank	58_37c	+1	reviewed	frame_shift_ins	c.125_126	p.A44fs	1.000:0.999	HMMPfam_DAN	HMMPfam_DAN,HMMSmart_CT	-	no_errors
NCRNA00174	0	genome.wustl.edu	37	7	65842446	65842446	+	RNA	SNP	G	G	A	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	7	65842446	65842446	G	A	SNP	NCRNA00174	NR_026873.1	human	genbank	58_37c	-1	validated	rna	NULL	NULL	0.786	-	-	-	no_errors
NDOR1	0	genome.wustl.edu	37	9	140108277	140108278	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	9	140108277	140108278	-	G	INS	NDOR1	NM_001144026.1	human	genbank	58_37c	+1	reviewed	frame_shift_ins	c.357_358	p.S121fs	0.230:0.998	HMMPfam_Flavodoxin_1,superfamily_SSF52218	HMMPfam_NAD_binding_1,HMMPfam_FAD_binding_1,HMMPfam_Flavodoxin_1,superfamily_Riboflavin_synthase_like_b-brl,superfamily_SSF52218,superfamily_SSF52343	-	no_errors
NR1H2	0	genome.wustl.edu	37	19	50881822	50881823	+	In_Frame_Ins	INS	-	-	CAG	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	19	50881822	50881823	-	CAG	INS	NR1H2	NM_007121.4	human	genbank	58_37c	+1	validated	in_frame_ins	c.516_517	p.175in_frame_insQ	0.999:1.000	superfamily_Nuclear receptor ligand-binding domain,superfamily_Glucocorticoid receptor-like (DNA-binding domain)	HMMPfam_Hormone_recep,HMMSmart_SM00430,HMMPfam_zf-C4,HMMSmart_SM00399,PatternScan_NUCLEAR_REC_DBD_1,superfamily_Nuclear receptor ligand-binding domain,superfamily_Glucocorticoid receptor-like (DNA-binding domain)	-	no_errors
PALM3	0	genome.wustl.edu	37	19	14167592	14167592	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	19	14167592	14167592	G	T	SNP	PALM3	NM_001145028.1	human	genbank	58_37c	-1	validated	missense	c.151	p.L51I	1.000	NULL	NULL	-	no_errors
PCDH19	0	genome.wustl.edu	37	X	99662746	99662746	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	X	99662746	99662746	G	A	SNP	PCDH19	NM_001105243.1	human	genbank	58_37c	-1	reviewed	missense	c.850	p.R284C	0.087	HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin	HMMPfam_Cadherin,HMMSmart_CA,PatternScan_CADHERIN_1,HMMPfam_Cadherin_2,superfamily_Cadherin	-	no_errors
PCDHA5	0	genome.wustl.edu	37	5	140202792	140202792	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	5	140202792	140202792	G	A	SNP	PCDHA5	NM_018908.2	human	genbank	58_37c	+1	reviewed	missense	c.1432	p.A478T	0.993	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like	HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin_2,superfamily_Cadherin-like	-	no_errors
PIK3CA	0	genome.wustl.edu	37	3	178936082	178936082	+	Missense_Mutation	SNP	G	G	A	rs121913273	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	3	178936082	178936082	G	A	SNP	PIK3CA	NM_006218.2	human	genbank	58_37c	+1	reviewed	missense	c.1624	p.E542K	1.000	HMMPfam_PI3Ka,HMMSmart_PI3Ka,superfamily_ARM-type_fold	HMMSmart_C2,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,HMMPfam_PI3Ka,HMMSmart_PI3Ka,HMMPfam_PI3K_C2,HMMSmart_PI3K_C2,HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_C2_CaLB,superfamily_Kinase_like,superfamily_ARM-type_fold,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2,superfamily_SSF54236	-	no_errors
PIK3CD	0	genome.wustl.edu	37	1	9777113	9777114	+	Frame_Shift_Ins	INS	-	-	CC	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	1	9777113	9777114	-	CC	INS	PIK3CD	NM_005026.3	human	genbank	58_37c	+1	validated	frame_shift_ins	c.877_878	p.Q295fs	0.001:0.080	NULL	HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,HMMPfam_PI3Ka,HMMSmart_PI3Ka,HMMPfam_PI3K_C2,HMMSmart_PI3K_C2,HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_C2_CaLB,superfamily_Kinase_like,superfamily_ARM-type_fold,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2,superfamily_SSF54236	-	no_errors
POLR2A	0	genome.wustl.edu	37	17	7388097	7388098	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	17	7388097	7388098	-	C	INS	POLR2A	NM_000937.3	human	genbank	58_37c	+1	validated	frame_shift_ins	c.14_15	p.S8fs	1.000:0.998	NULL	HMMPfam_RNA_pol_Rpb1_R,PatternScan_RNA_POL_II_REPEAT,HMMPfam_RNA_pol_Rpb1_2,HMMPfam_RNA_pol_Rpb1_3,HMMPfam_RNA_pol_Rpb1_7,HMMPfam_RNA_pol_Rpb1_6,HMMPfam_RNA_pol_Rpb1_1,HMMPfam_RNA_pol_Rpb1_5,HMMPfam_RNA_pol_Rpb1_4,superfamily_SSF64484	-	no_errors
PRPF38B	0	genome.wustl.edu	37	1	109241968	109241969	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	1	109241968	109241969	-	G	INS	PRPF38B	NM_018061.2	human	genbank	58_37c	+1	validated	frame_shift_ins	c.967_968	p.L325fs	1.000:0.997	NULL	HMMPfam_PRP38	-	no_errors
PUS10	0	genome.wustl.edu	37	2	61238927	61238927	+	Silent	SNP	A	A	G	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	2	61238927	61238927	A	G	SNP	PUS10	NM_144709.2	human	genbank	58_37c	-1	validated	silent	c.99	p.F33	0.988	NULL	NULL	-	no_errors
PWRN2	0	genome.wustl.edu	37	15	24411003	24411004	+	RNA	DEL	AA	AA	-	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	AA	AA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	15	24411003	24411004	AA	-	DEL	PWRN2	NR_026647.1	human	genbank	58_37c	-1	provisional	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors
RALGAPB	0	genome.wustl.edu	37	20	37146232	37146233	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	20	37146232	37146233	-	C	INS	RALGAPB	NM_020336.2	human	genbank	58_37c	+1	validated	frame_shift_ins	c.1135_1136	p.H382fs	0.999:1.000	NULL	superfamily_Rap/Ran-GAP (Pfam 02145)	-	no_errors
RALGAPB	0	genome.wustl.edu	37	20	37203484	37203485	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	20	37203484	37203485	-	C	INS	RALGAPB	NM_020336.2	human	genbank	58_37c	+1	validated	frame_shift_ins	c.4359_4360	p.H1455fs	0.992:1.000	superfamily_Rap/Ran-GAP (Pfam 02145)	superfamily_Rap/Ran-GAP (Pfam 02145)	-	no_errors
RBMX	0	genome.wustl.edu	37	X	135960146	135960147	+	Frame_Shift_Ins	INS	-	-	AA	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	X	135960146	135960147	-	AA	INS	RBMX	NM_002139.3	human	genbank	58_37c	-1	reviewed	frame_shift_ins	c.316_315	p.P105fs	1.000:1.000	superfamily_RNA-binding domain RBD	HMMPfam_RRM_1,HMMSmart_SM00360,HMMSmart_SM00361,HMMPfam_RBM1CTR,superfamily_RNA-binding domain RBD	-	no_errors
RNMTL1	0	genome.wustl.edu	37	17	694866	694866	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	17	694866	694866	G	A	SNP	RNMTL1	NM_018146.2	human	genbank	58_37c	+1	provisional	missense	c.820	p.V274M	0.004	HMMPfam_SpoU_methylase,superfamily_SSF75217	HMMPfam_SpoU_methylase,HMMPfam_SpoU_sub_bind,superfamily_SSF55315,superfamily_SSF75217	-	no_errors
ROCK2	0	genome.wustl.edu	37	2	11355160	11355160	+	Nonsense_Mutation	SNP	A	A	T	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	2	11355160	11355160	A	T	SNP	ROCK2	NM_004850.3	human	genbank	58_37c	-1	reviewed	nonsense	c.1742	p.L581*	1.000	NULL	HMMPfam_HR1,HMMSmart_SM00133,HMMSmart_SM00219,HMMPfam_PH,HMMSmart_SM00233,HMMPfam_C1_1,HMMSmart_SM00109,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),HMMPfam_Rho_Binding,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,HMMPfam_Pkinase_C,superfamily_PH domain-like,superfamily_Cysteine-rich domain	-	no_errors
RPL10L	0	genome.wustl.edu	37	14	47120828	47120828	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	14	47120828	47120828	T	C	SNP	RPL10L	NM_080746.2	human	genbank	58_37c	-1	reviewed	missense	c.112	p.R38G	0.992	HMMPfam_Ribosomal_L16,superfamily_Ribosomal_L10e/L16	HMMPfam_Ribosomal_L16,superfamily_Ribosomal_L10e/L16,PatternScan_RIBOSOMAL_L10E	-	no_errors
SBF1	0	genome.wustl.edu	37	22	50898755	50898756	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	22	50898755	50898756	-	G	INS	SBF1	NM_002972.2	human	genbank	58_37c	-1	validated	frame_shift_ins	c.3229_3228	p.S1076fs	0.053:0.039	NULL	HMMPfam_DENN,HMMSmart_SM00799,HMMPfam_PH,HMMSmart_SM00233,HMMPfam_GRAM,HMMSmart_SM00568,HMMPfam_dDENN,HMMSmart_SM00801,HMMPfam_uDENN,HMMSmart_SM00800,HMMPfam_Myotub-related,superfamily_PH domain-like,superfamily_(Phosphotyrosine protein) phosphatases II	-	no_errors
SELP	0	genome.wustl.edu	37	1	169564091	169564091	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	1	169564091	169564091	A	G	SNP	SELP	NM_003005.3	human	genbank	58_37c	-1	reviewed	missense	c.2126	p.V709A	0.000	HMMPfam_Sushi,HMMSmart_SM00032,superfamily_Complement control module/SCR domain	HMMPfam_Sushi,HMMSmart_SM00032,HMMPfam_Lectin_C,HMMSmart_SM00034,HMMPfam_EGF,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_Complement control module/SCR domain,superfamily_C-type lectin-like,PatternScan_C_TYPE_LECTIN_1,superfamily_EGF/Laminin	-	no_errors
SETDB1	0	genome.wustl.edu	37	1	150917623	150917624	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	1	150917623	150917624	-	G	INS	SETDB1	ENST00000368960	human	ensembl	58_37c	+1	known	frame_shift_ins	c.1179_1180	p.T396fs	0.000:0.000	NULL	HMMSmart_TUDOR	-	no_errors
SLC4A3	0	genome.wustl.edu	37	2	220494110	220494111	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	2	220494110	220494111	-	C	INS	SLC4A3	NM_201574.2	human	genbank	58_37c	+1	validated	frame_shift_ins	c.462_463	p.H156fs	0.015:0.049	NULL	HMMPfam_HCO3_cotransp,HMMPfam_Band_3_cyto,superfamily_Phoshotransferase/anion transport protein,PatternScan_ANION_EXCHANGER_1,PatternScan_ANION_EXCHANGER_2	-	no_errors
STAB1	0	genome.wustl.edu	37	3	52547907	52547908	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	3	52547907	52547908	-	C	INS	STAB1	NM_015136.2	human	genbank	58_37c	+1	reviewed	frame_shift_ins	c.3357_3358	p.R1121fs	0.951:0.999	HMMSmart_SM00554,superfamily_FAS1 domain	HMMPfam_Xlink,HMMSmart_SM00445,PatternScan_LINK_1,HMMPfam_Fasciclin,HMMSmart_SM00554,superfamily_FAS1 domain,HMMSmart_SM00179,HMMPfam_Laminin_EGF,HMMSmart_SM00180,PatternScan_EGF_LAM_1,HMMPfam_EGF,HMMSmart_SM00181,superfamily_Growth factor receptor domain,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF_2,superfamily_C-type lectin-like,PatternScan_CYTOCHROME_P450,superfamily_EGF/Laminin	-	no_errors
TAX1BP1	0	genome.wustl.edu	37	7	27831635	27831636	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	7	27831635	27831636	-	T	INS	TAX1BP1	NM_006024.5	human	genbank	58_37c	+1	validated	frame_shift_ins	c.1049_1050	p.L352fs	0.000:0.000	HMMPfam_CALCOCO1	HMMPfam_CALCOCO1	-	no_errors
TNPO3	0	genome.wustl.edu	37	7	128610258	128610259	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	7	128610258	128610259	-	G	INS	TNPO3	NM_012470.2	human	genbank	58_37c	-1	validated	frame_shift_ins	c.2542_2541	p.Y847fs	1.000:0.805	NULL	HMMPfam_Xpo1,superfamily_ARM repeat	-	no_errors
TNS1	0	genome.wustl.edu	37	2	218712887	218712889	+	In_Frame_Del	DEL	GCT	GCT	-	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	GCT	GCT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	2	218712887	218712889	GCT	-	DEL	TNS1	NM_022648.4	human	genbank	58_37c	-1	reviewed	in_frame_del	c.1978_1976	p.Q659in_frame_del	1.000:1.000:0.994	NULL	HMMPfam_SH2,HMMSmart_SH2,HMMSmart_PTB,superfamily_C2_CaLB,HMMPfam_PTB,HMMPfam_PTEN_C2,superfamily_SSF50729,superfamily_SSF52799,superfamily_SSF55550	-	no_errors
WNT16	0	genome.wustl.edu	37	7	120971878	120971879	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	7	120971878	120971879	-	G	INS	WNT16	NM_057168.1	human	genbank	58_37c	+1	reviewed	frame_shift_ins	c.493_494	p.C168fs	1.000:1.000	HMMPfam_wnt,HMMSmart_SM00097	HMMPfam_wnt,HMMSmart_SM00097,PatternScan_WNT1	-	no_errors
ZBED1	0	genome.wustl.edu	37	X	2408674	2408674	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	X	2408674	2408674	G	T	SNP	ZBED1	NM_004729.3	human	genbank	58_37c	-1	reviewed	missense	c.87	p.F29L	0.994	HMMPfam_zf-BED,HMMSmart_ZnF_BED	HMMPfam_zf-BED,HMMSmart_ZnF_BED,HMMPfam_hATC	-	no_errors
ZFHX4	0	genome.wustl.edu	37	8	77617546	77617547	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-E9-A1NI-01A-11W-A16H-09	TCGA-E9-A1NI-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3bf0b169-f870-4887-be06-414f20f1dcf0	cc9a8594-88b6-4f78-a840-9173a75e2fdb	8	77617546	77617547	-	G	INS	ZFHX4	NM_024721.4	human	genbank	58_37c	+1	validated	frame_shift_ins	c.1223_1224	p.L411fs	1.000:1.000	NULL	HMMPfam_Homeobox,HMMSmart_SM00389,HMMSmart_SM00451,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,superfamily_Homeodomain-like,HMMSmart_SM00355,PatternScan_HOMEOBOX_1,PatternScan_SOMATOTROPIN_2,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
