GDAC_clinicalDataPicker1 stage2File | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataMerger/SKCM/2897828/0.GDAC_clinicalDataMerger.Finished/SKCM.clin.merged.txt |
GDAC_clinicalDataPicker1 selectFile | file:/xchip/cga/reference/tcga/clinical/2013_03_30/stage3_params_clin_skcm.tsv |
GDAC_clinicalDataPicker1 nodeColumn | 1 |
GDAC_clinicalDataPicker1 outPrefix | SKCM |
Execution Times: | |
Submitted: | 12:38:49 08-04-13 |
Completed: | |
Elapsed: | 06 hrs 12 mins 57 secs |
step 1. GDAC_clinicalDataPicker [id: 372534] Picks out the clinical paramters of interest
urn:lsid:broadinstitute.org:cancer.genome.analysis:00312:26
stage2File | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataMerger/SKCM/2897828/0.GDAC_clinicalDataMerger.Finished/SKCM.clin.merged.txt |
selectFile | file:/xchip/cga/reference/tcga/clinical/2013_03_30/stage3_params_clin_skcm.tsv |
nodeColumn | 1 |
outPrefix | SKCM |
Output Files: | |
SKCM.clin.merged.picked.txt | |
.lsf.out | |
stdout.txt |
Execution Times: | |
Submitted: | 12:38:49 08-04-13 |
Completed: | 13:08:07 08-04-13 |
Elapsed: | 00 hrs 29 mins 18 secs |
step 2. GDAC_clinicalDataPickerReport [id: 372535] Clinical data report
urn:lsid:broadinstitute.org:cancer.genome.analysis:00330:50
picked | SKCM.clin.merged.picked.txt |
Execution Times: | |
Submitted: | 12:38:49 08-04-13 |
Completed: | 18:51:45 08-04-13 |
Elapsed: | 06 hrs 12 mins 55 secs |