| GDAC_clinicalDataPicker1 stage2File | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataMerger/STAD/2897929/0.GDAC_clinicalDataMerger.Finished/STAD.clin.merged.txt |
| GDAC_clinicalDataPicker1 selectFile | file:/xchip/cga/reference/tcga/clinical/2013_03_30/stage3_params_clin_stad.tsv |
| GDAC_clinicalDataPicker1 nodeColumn | 1 |
| GDAC_clinicalDataPicker1 outPrefix | STAD |
| Execution Times: | |
| Submitted: | 12:43:37 08-04-13 |
| Completed: | |
| Elapsed: | 06 hrs 09 mins 30 secs |
step 1. GDAC_clinicalDataPicker [id: 372569] Picks out the clinical paramters of interest
urn:lsid:broadinstitute.org:cancer.genome.analysis:00312:26
| stage2File | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataMerger/STAD/2897929/0.GDAC_clinicalDataMerger.Finished/STAD.clin.merged.txt |
| selectFile | file:/xchip/cga/reference/tcga/clinical/2013_03_30/stage3_params_clin_stad.tsv |
| nodeColumn | 1 |
| outPrefix | STAD |
| Output Files: | |
| STAD.clin.merged.picked.txt | |
| .lsf.out | |
| stdout.txt | |
| Execution Times: | |
| Submitted: | 12:43:39 08-04-13 |
| Completed: | 14:38:51 08-04-13 |
| Elapsed: | 01 hrs 55 mins 12 secs |
step 2. GDAC_clinicalDataPickerReport [id: 372570] Clinical data report
urn:lsid:broadinstitute.org:cancer.genome.analysis:00330:50
| picked | STAD.clin.merged.picked.txt |
| Execution Times: | |
| Submitted: | 12:43:39 08-04-13 |
| Completed: | 18:53:04 08-04-13 |
| Elapsed: | 06 hrs 09 mins 25 secs |