| GDAC_clinicalDataPicker1 stage2File | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataMerger/THCA/2897989/0.GDAC_clinicalDataMerger.Finished/THCA.clin.merged.txt |
| GDAC_clinicalDataPicker1 selectFile | file:/xchip/cga/reference/tcga/clinical/2013_03_30/stage3_params_clin_thca.tsv |
| GDAC_clinicalDataPicker1 nodeColumn | 1 |
| GDAC_clinicalDataPicker1 outPrefix | THCA |
| Execution Times: | |
| Submitted: | 12:47:20 08-04-13 |
| Completed: | |
| Elapsed: | 06 hrs 06 mins 53 secs |
step 1. GDAC_clinicalDataPicker [id: 372613] Picks out the clinical paramters of interest
urn:lsid:broadinstitute.org:cancer.genome.analysis:00312:26
| stage2File | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataMerger/THCA/2897989/0.GDAC_clinicalDataMerger.Finished/THCA.clin.merged.txt |
| selectFile | file:/xchip/cga/reference/tcga/clinical/2013_03_30/stage3_params_clin_thca.tsv |
| nodeColumn | 1 |
| outPrefix | THCA |
| Output Files: | |
| THCA.clin.merged.picked.txt | |
| .lsf.out | |
| stdout.txt | |
| Execution Times: | |
| Submitted: | 12:47:23 08-04-13 |
| Completed: | 18:15:34 08-04-13 |
| Elapsed: | 05 hrs 28 mins 11 secs |
step 2. GDAC_clinicalDataPickerReport [id: 372615] Clinical data report
urn:lsid:broadinstitute.org:cancer.genome.analysis:00330:50
| picked | THCA.clin.merged.picked.txt |
| Execution Times: | |
| Submitted: | 12:47:23 08-04-13 |
| Completed: | 18:54:12 08-04-13 |
| Elapsed: | 06 hrs 06 mins 48 secs |