Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
A2M	2	broad.mit.edu	37	12	9225370	9225370	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AARS	16	broad.mit.edu	37	16	70299365	70299365	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA12	26154	broad.mit.edu	37	2	215917192	215917192	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA12	26154	broad.mit.edu	37	2	215917194	215917194	+	Intron	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA8	10351	broad.mit.edu	37	17	66914177	66914177	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA8	10351	broad.mit.edu	37	17	66915347	66915347	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB1	5243	broad.mit.edu	37	7	87178743	87178743	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB5	340273	broad.mit.edu	37	7	20687653	20687653	+	5'UTR	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB5	340273	broad.mit.edu	37	7	20698250	20698250	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC5	10057	broad.mit.edu	37	3	183645220	183645220	+	Silent	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCG4	64137	broad.mit.edu	37	11	119029413	119029413	+	Silent	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCG5	64240	broad.mit.edu	37	2	44052004	44052004	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCG8	64241	broad.mit.edu	37	2	44100901	44100901	+	Intron	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABLIM3	22885	broad.mit.edu	37	5	148521775	148521775	+	Intron	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABLIM3	22885	broad.mit.edu	37	5	148622135	148622135	+	Intron	SNP	A	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACAA2	10449	broad.mit.edu	37	18	47329193	47329193	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSL6	23305	broad.mit.edu	37	5	131312363	131312363	+	Nonsense_Mutation	SNP	G	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTR5	79913	broad.mit.edu	37	20	37384668	37384668	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACVR2A	92	broad.mit.edu	37	2	148602690	148602690	+	5'UTR	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAD1	132612	broad.mit.edu	37	4	123301509	123301509	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM2	2515	broad.mit.edu	37	8	39645695	39645695	+	Missense_Mutation	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM33	80332	broad.mit.edu	37	20	3653196	3653196	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106174436	106174436	+	RNA	SNP	G	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106321752	106321752	+	RNA	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106926529	106926529	+	Intron	SNP	C	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	107170326	107170326	+	RNA	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS12	81792	broad.mit.edu	37	5	33616189	33616189	+	Intron	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS13	11093	broad.mit.edu	37	9	136321309	136321309	+	Silent	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS16	170690	broad.mit.edu	37	5	5232586	5232586	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS18	170692	broad.mit.edu	37	16	77389879	77389879	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS6	11174	broad.mit.edu	37	5	64521877	64521877	+	Intron	SNP	A	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTSL3	57188	broad.mit.edu	37	15	84611461	84611461	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY10	55811	broad.mit.edu	37	1	167794135	167794135	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY2	108	broad.mit.edu	37	5	7820628	7820628	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADD2	119	broad.mit.edu	37	2	70904853	70904853	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADH4	127	broad.mit.edu	37	4	100052734	100052734	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADHFE1	137872	broad.mit.edu	37	8	67361002	67361002	+	Intron	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADRA1A	148	broad.mit.edu	37	8	26627597	26627597	+	3'UTR	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADRA2B	151	broad.mit.edu	37	2	96781457	96781457	+	Silent	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AEBP1	165	broad.mit.edu	37	7	44152342	44152342	+	Silent	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AEBP2	121536	broad.mit.edu	37	12	19615515	19615515	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFF2	2334	broad.mit.edu	37	X	147743642	147743642	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFP	174	broad.mit.edu	37	4	74307937	74307937	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGAP2	116986	broad.mit.edu	37	12	58124496	58124496	+	Intron	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGAP3	116988	broad.mit.edu	37	7	150839627	150839628	+	Frame_Shift_Ins	INS	-	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGBL1	123624	broad.mit.edu	37	15	87572018	87572018	+	Intron	SNP	C	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGXT	189	broad.mit.edu	37	2	241808615	241808615	+	Missense_Mutation	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKD1	221264	broad.mit.edu	37	6	109954214	109954214	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKNA	80709	broad.mit.edu	37	9	117138647	117138647	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKR1D1	6718	broad.mit.edu	37	7	137792057	137792057	+	Intron	SNP	G	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH1A2	8854	broad.mit.edu	37	15	58253451	58253451	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH1L1	10840	broad.mit.edu	37	3	125876315	125876315	+	Silent	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALG3	10195	broad.mit.edu	37	3	183960561	183960561	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALLC	55821	broad.mit.edu	37	2	3730547	3730547	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMELY	266	broad.mit.edu	37	Y	6736316	6736316	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMOTL1	154810	broad.mit.edu	37	11	94554901	94554901	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMOT	154796	broad.mit.edu	37	X	112054522	112054522	+	Nonsense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMPH	273	broad.mit.edu	37	7	38462040	38462040	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANAPC4	29945	broad.mit.edu	37	4	25382048	25382048	+	Missense_Mutation	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANAPC5	51433	broad.mit.edu	37	12	121773309	121773309	+	Intron	SNP	C	G	G	rs113720618	by1000genomes	TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK1	286	broad.mit.edu	37	8	41547719	41547719	+	Intron	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK2	287	broad.mit.edu	37	4	114208779	114208779	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD20B	729171	broad.mit.edu	37	2	95514947	95514947	+	RNA	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD30A	91074	broad.mit.edu	37	10	37486390	37486390	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD33	341405	broad.mit.edu	37	12	52282384	52282384	+	Translation_Start_Site	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD35	148741	broad.mit.edu	37	1	145561885	145561885	+	Missense_Mutation	SNP	C	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD44	91526	broad.mit.edu	37	2	197873684	197873684	+	Nonsense_Mutation	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANLN	54443	broad.mit.edu	37	7	36464304	36464304	+	Missense_Mutation	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANP32E	81611	broad.mit.edu	37	1	150199078	150199078	+	Silent	SNP	C	G	G	rs144321821		TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AOX1	316	broad.mit.edu	37	2	201531518	201531518	+	Intron	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP3D1	8943	broad.mit.edu	37	19	2109914	2109914	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP3S2	10239	broad.mit.edu	37	15	90447054	90447054	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOB	338	broad.mit.edu	37	2	21228933	21228933	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APTX	54840	broad.mit.edu	37	9	32973624	32973624	+	Missense_Mutation	SNP	C	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AQP4	361	broad.mit.edu	37	18	24442598	24442598	+	Intron	SNP	A	T	T	rs35940398		TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AQPEP	206338	broad.mit.edu	37	5	115335492	115335492	+	Missense_Mutation	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARCN1	372	broad.mit.edu	37	11	118451821	118451821	+	Intron	SNP	T	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARCN1	372	broad.mit.edu	37	11	118463522	118463522	+	Silent	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP25	9938	broad.mit.edu	37	2	69040394	69040394	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP28	79822	broad.mit.edu	37	18	6895014	6895014	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP39	80728	broad.mit.edu	37	8	145763250	145763250	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF4	50649	broad.mit.edu	37	2	131704278	131704278	+	Intron	SNP	G	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF5	7984	broad.mit.edu	37	7	144060384	144060384	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARL5B	221079	broad.mit.edu	37	10	18964192	18964192	+	3'UTR	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARMC3	219681	broad.mit.edu	37	10	23257482	23257482	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARPP21	10777	broad.mit.edu	37	3	35778749	35778749	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARSF	416	broad.mit.edu	37	X	2998960	2998960	+	Silent	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASAP1	50807	broad.mit.edu	37	8	131138090	131138090	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASB5	140458	broad.mit.edu	37	4	177136756	177136756	+	Nonsense_Mutation	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASCC3	10973	broad.mit.edu	37	6	101103674	101103674	+	Silent	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASPM	259266	broad.mit.edu	37	1	197053579	197053579	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASPM	259266	broad.mit.edu	37	1	197107879	197107879	+	Intron	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTL	431705	broad.mit.edu	37	2	96798292	96798292	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN1	460	broad.mit.edu	37	1	176915133	176915133	+	Silent	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATF6B	1388	broad.mit.edu	37	6	32087639	32087639	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATM	472	broad.mit.edu	37	11	108121360	108121360	+	Intron	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATN1	1822	broad.mit.edu	37	12	7050624	7050624	+	Missense_Mutation	SNP	A	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP10B	23120	broad.mit.edu	37	5	160048044	160048044	+	Intron	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP11C	286410	broad.mit.edu	37	X	138827926	138827926	+	Frame_Shift_Del	DEL	C	-	-			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2B3	492	broad.mit.edu	37	X	152814197	152814197	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2C2	9914	broad.mit.edu	37	16	84449249	84449249	+	Intron	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP5F1	515	broad.mit.edu	37	1	111998816	111998816	+	Missense_Mutation	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP8B3	148229	broad.mit.edu	37	19	1785468	1785468	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP9B	374868	broad.mit.edu	37	18	77105355	77105355	+	Intron	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AZI1	22994	broad.mit.edu	37	17	79164929	79164929	+	Intron	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
B3GNT6	192134	broad.mit.edu	37	11	76750737	76750737	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAALC	79870	broad.mit.edu	37	8	104225421	104225421	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAAT	570	broad.mit.edu	37	9	104124972	104124972	+	Missense_Mutation	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAI3	577	broad.mit.edu	37	6	70034899	70034899	+	Silent	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAT2	7916	broad.mit.edu	37	6	31597268	31597268	+	Intron	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCR	613	broad.mit.edu	37	22	23627343	23627343	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BDH2	56898	broad.mit.edu	37	4	104004086	104004086	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BFSP2	8419	broad.mit.edu	37	3	133166285	133166285	+	Intron	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BIRC6	57448	broad.mit.edu	37	2	32689617	32689617	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BIRC6	57448	broad.mit.edu	37	2	32726951	32726951	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BIRC6	57448	broad.mit.edu	37	2	32768471	32768471	+	Missense_Mutation	SNP	C	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BIRC6	57448	broad.mit.edu	37	2	32768555	32768555	+	Missense_Mutation	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BLMH	642	broad.mit.edu	37	17	28599581	28599582	+	Frame_Shift_Ins	INS	-	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMP5	653	broad.mit.edu	37	6	55739810	55739810	+	5'UTR	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMPER	168667	broad.mit.edu	37	7	34118560	34118560	+	Silent	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMS1	9790	broad.mit.edu	37	10	43292409	43292409	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BNC1	646	broad.mit.edu	37	15	83926469	83926469	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BNC1	646	broad.mit.edu	37	15	83931668	83931668	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRCC3	79184	broad.mit.edu	37	X	154299836	154299836	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRDT	676	broad.mit.edu	37	1	92470181	92470181	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRF1	2972	broad.mit.edu	37	14	105692651	105692651	+	Intron	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRWD1	54014	broad.mit.edu	37	21	40588694	40588694	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BSG	682	broad.mit.edu	37	19	579483	579483	+	Intron	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTBD7	55727	broad.mit.edu	37	14	93709128	93709128	+	Missense_Mutation	SNP	T	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTN2A1	11120	broad.mit.edu	37	6	26468861	26468861	+	3'UTR	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTN3A1	11119	broad.mit.edu	37	6	26413399	26413399	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BUB1	699	broad.mit.edu	37	2	111426970	111426970	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf71	118461	broad.mit.edu	37	10	50530859	50530859	+	Frame_Shift_Del	DEL	C	-	-			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf91	170393	broad.mit.edu	37	10	134259298	134259298	+	Intron	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf63	79864	broad.mit.edu	37	11	122775073	122775074	+	Frame_Shift_Ins	INS	-	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf50	160419	broad.mit.edu	37	12	88377040	88377040	+	Intron	SNP	G	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf51	283450	broad.mit.edu	37	12	112708216	112708216	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf27	123591	broad.mit.edu	37	15	76496577	76496577	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf41	84529	broad.mit.edu	37	15	36906097	36906097	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf103	256302	broad.mit.edu	37	17	21146659	21146659	+	Silent	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf57	124989	broad.mit.edu	37	17	45502543	45502543	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf71	55181	broad.mit.edu	37	17	57289749	57289749	+	Missense_Mutation	SNP	A	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf95	124512	broad.mit.edu	37	17	74729667	74729667	+	Nonsense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C19orf41	126123	broad.mit.edu	37	19	50661573	50661573	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf101	257044	broad.mit.edu	37	1	244715607	244715607	+	Intron	SNP	T	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf105	92346	broad.mit.edu	37	1	172431312	172431312	+	Intron	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf112	55732	broad.mit.edu	37	1	169798428	169798428	+	Missense_Mutation	SNP	C	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf122	127687	broad.mit.edu	37	1	38274837	38274837	+	3'UTR	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf141	400757	broad.mit.edu	37	1	67559010	67559010	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf173	127254	broad.mit.edu	37	1	75102097	75102097	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf166	128826	broad.mit.edu	37	20	61150803	61150804	+	5'UTR	DNP	CC	AA	AA			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf70	140683	broad.mit.edu	37	20	31763433	31763433	+	Intron	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2	717	broad.mit.edu	37	6	31903837	31903837	+	Silent	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf48	348738	broad.mit.edu	37	2	10282453	10282453	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf62	375341	broad.mit.edu	37	3	49308858	49308858	+	Missense_Mutation	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf63	23272	broad.mit.edu	37	3	56675799	56675799	+	Intron	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf40	401137	broad.mit.edu	37	4	71020081	71020081	+	Splice_Site	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf23	79614	broad.mit.edu	37	5	32789921	32789921	+	3'UTR	SNP	C	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf118	168090	broad.mit.edu	37	6	165714964	165714964	+	Intron	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7	730	broad.mit.edu	37	5	40964941	40964941	+	Missense_Mutation	SNP	T	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf34	135927	broad.mit.edu	37	7	142637531	142637531	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf58	79974	broad.mit.edu	37	7	120906170	120906170	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf173	441476	broad.mit.edu	37	9	140145688	140145688	+	5'Flank	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1C	775	broad.mit.edu	37	12	2778097	2778097	+	Splice_Site	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1E	777	broad.mit.edu	37	1	181620470	181620470	+	Intron	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1E	777	broad.mit.edu	37	1	181763998	181763998	+	Splice_Site	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1S	779	broad.mit.edu	37	1	201081551	201081551	+	5'UTR	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNB2	783	broad.mit.edu	37	10	18789826	18789850	+	Frame_Shift_Del	DEL	ACATGAGGCTGCAGCATGAACAGAG	-	-			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNG3	10368	broad.mit.edu	37	16	24366154	24366154	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CADM2	253559	broad.mit.edu	37	3	85932594	85932594	+	Splice_Site	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALCOCO1	57658	broad.mit.edu	37	12	54109899	54109899	+	Intron	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMK2B	816	broad.mit.edu	37	7	44259817	44259817	+	Silent	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMK2D	817	broad.mit.edu	37	4	114434364	114434364	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CARD11	84433	broad.mit.edu	37	7	2968426	2968426	+	Intron	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CARS2	79587	broad.mit.edu	37	13	111319904	111319904	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASP1	834	broad.mit.edu	37	11	104897650	104897650	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASP9	842	broad.mit.edu	37	1	15844850	15844850	+	Missense_Mutation	SNP	A	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCBP2	1238	broad.mit.edu	37	3	42931753	42931753	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC102B	79839	broad.mit.edu	37	18	66504245	66504245	+	Missense_Mutation	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC129	223075	broad.mit.edu	37	7	31617894	31617894	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC48	79825	broad.mit.edu	37	3	128758690	128758690	+	Silent	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC50	152137	broad.mit.edu	37	3	191107176	191107176	+	Intron	SNP	T	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC63	160762	broad.mit.edu	37	12	111330844	111330844	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC77	84318	broad.mit.edu	37	12	539914	539914	+	Intron	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC88B	283234	broad.mit.edu	37	11	64108862	64108862	+	Intron	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC91	55297	broad.mit.edu	37	12	28701853	28701853	+	Intron	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCNF	899	broad.mit.edu	37	16	2499515	2499515	+	Intron	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD1A	909	broad.mit.edu	37	1	158224560	158224561	+	Intron	DEL	TC	-	-			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD1B	910	broad.mit.edu	37	1	158300429	158300429	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD1D	912	broad.mit.edu	37	1	158152106	158152106	+	Intron	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD209	30835	broad.mit.edu	37	19	7809059	7809059	+	Missense_Mutation	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD300C	10871	broad.mit.edu	37	17	72537713	72537713	+	3'UTR	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD34	947	broad.mit.edu	37	1	208061568	208061568	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD6	923	broad.mit.edu	37	11	60785469	60785469	+	Silent	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC23	8697	broad.mit.edu	37	5	137542338	137542338	+	Silent	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC40	51362	broad.mit.edu	37	6	110522870	110522870	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDCA7L	55536	broad.mit.edu	37	7	21951455	21951455	+	Intron	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH13	1012	broad.mit.edu	37	16	83813620	83813620	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH18	1016	broad.mit.edu	37	5	19520713	19520713	+	Intron	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH8	1006	broad.mit.edu	37	16	61689281	61689281	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK17	5128	broad.mit.edu	37	12	96692734	96692734	+	Missense_Mutation	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDKN2A	1029	broad.mit.edu	37	9	21968267	21968267	+	Intron	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDS1	1040	broad.mit.edu	37	4	85560132	85560132	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDYL	9425	broad.mit.edu	37	6	4715960	4715960	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CENPA	1058	broad.mit.edu	37	2	27016122	27016122	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CENPF	1063	broad.mit.edu	37	1	214816822	214816822	+	Intron	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP152	22995	broad.mit.edu	37	15	49036530	49036530	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP170	9859	broad.mit.edu	37	1	243303204	243303204	+	Intron	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP350	9857	broad.mit.edu	37	1	180006234	180006234	+	Intron	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHL1	10752	broad.mit.edu	37	3	432949	432949	+	Intron	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHN2	1124	broad.mit.edu	37	7	29440108	29440108	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHN2	1124	broad.mit.edu	37	7	29440373	29440373	+	Missense_Mutation	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRNB3	1142	broad.mit.edu	37	8	42552778	42552778	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRND	1144	broad.mit.edu	37	2	233396061	233396061	+	Splice_Site	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRNG	1146	broad.mit.edu	37	2	233409472	233409472	+	Intron	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHST2	9435	broad.mit.edu	37	3	142841065	142841065	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCN5	1184	broad.mit.edu	37	X	49840441	49840441	+	Intron	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCN6	1185	broad.mit.edu	37	1	11879386	11879388	+	Intron	DEL	CTT	-	-			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC18B	497190	broad.mit.edu	37	16	74447479	74447479	+	Frame_Shift_Del	DEL	G	-	-	rs149591176	byFrequency	TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC4F	165530	broad.mit.edu	37	2	71038540	71038540	+	Intron	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC9A	283420	broad.mit.edu	37	12	10194175	10194175	+	5'UTR	DEL	G	-	-			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLGN	1047	broad.mit.edu	37	4	141316926	141316926	+	Intron	SNP	C	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLN5	1203	broad.mit.edu	37	13	77569228	77569228	+	Silent	SNP	T	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLN5	1203	broad.mit.edu	37	13	77569333	77569333	+	Silent	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLSTN2	64084	broad.mit.edu	37	3	140281150	140281150	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLSTN3	9746	broad.mit.edu	37	12	7302053	7302053	+	Intron	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLVS1	157807	broad.mit.edu	37	8	62289155	62289155	+	Intron	SNP	T	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNBD1	168975	broad.mit.edu	37	8	88249304	88249304	+	Silent	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNGB3	54714	broad.mit.edu	37	8	87674045	87674045	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN2	6900	broad.mit.edu	37	1	205042200	205042201	+	Missense_Mutation	DNP	TG	CT	CT			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN6	27255	broad.mit.edu	37	3	1320246	1320246	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP2	26047	broad.mit.edu	37	7	146805426	146805426	+	Silent	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP5	129684	broad.mit.edu	37	2	125367443	125367443	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP5	129684	broad.mit.edu	37	2	125671823	125671823	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103573670	103573670	+	Missense_Mutation	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL12A1	1303	broad.mit.edu	37	6	75796349	75796349	+	Intron	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL21A1	81578	broad.mit.edu	37	6	56035886	56035886	+	Missense_Mutation	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL22A1	169044	broad.mit.edu	37	8	139606189	139606189	+	Intron	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL22A1	169044	broad.mit.edu	37	8	139635992	139635992	+	Missense_Mutation	SNP	C	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL22A1	169044	broad.mit.edu	37	8	139788142	139788142	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL22A1	169044	broad.mit.edu	37	8	139819829	139819829	+	Intron	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL22A1	169044	broad.mit.edu	37	8	139838813	139838813	+	Intron	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL3A1	1281	broad.mit.edu	37	2	189859624	189859624	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A1	1282	broad.mit.edu	37	13	110819542	110819542	+	Silent	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A2	1284	broad.mit.edu	37	13	111077259	111077259	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A4	1286	broad.mit.edu	37	2	227914766	227914766	+	Intron	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A5	1287	broad.mit.edu	37	X	107930773	107930773	+	Silent	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A6	1288	broad.mit.edu	37	X	107449608	107449608	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A6	1288	broad.mit.edu	37	X	107462816	107462816	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A2	1290	broad.mit.edu	37	2	189933479	189933480	+	Intron	INS	-	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL6A3	1293	broad.mit.edu	37	2	238274647	238274647	+	Silent	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL6A6	131873	broad.mit.edu	37	3	130292971	130292971	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CORO1A	11151	broad.mit.edu	37	16	30199766	30199766	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CORO2B	10391	broad.mit.edu	37	15	69007578	69007578	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COX7B2	170712	broad.mit.edu	37	4	46737285	46737285	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPE	1363	broad.mit.edu	37	4	166408578	166408578	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CR1L	1379	broad.mit.edu	37	1	207867945	207867945	+	Silent	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRB1	23418	broad.mit.edu	37	1	197237509	197237509	+	5'UTR	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CREB3L3	84699	broad.mit.edu	37	19	4157097	4157097	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRHR2	1395	broad.mit.edu	37	7	30702210	30702210	+	Intron	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRISPLD2	83716	broad.mit.edu	37	16	84914128	84914128	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRYGA	1418	broad.mit.edu	37	2	209027790	209027790	+	Intron	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSF2RA	1438	broad.mit.edu	37	X	1409426	1409427	+	Intron	DNP	CC	AG	AG			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	2949081	2949081	+	Silent	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	3224543	3224543	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD2	114784	broad.mit.edu	37	1	34033332	34033332	+	Missense_Mutation	SNP	G	T	T	rs140959425		TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113301567	113301567	+	Intron	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113402884	113402884	+	Intron	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113649205	113649205	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113812445	113812445	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSTL1	128817	broad.mit.edu	37	20	23425464	23425464	+	Silent	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA3	29119	broad.mit.edu	37	10	69299427	69299427	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNND2	1501	broad.mit.edu	37	5	11110885	11110885	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUX2	23316	broad.mit.edu	37	12	111701430	111701434	+	Intron	DEL	AAAAC	-	-	rs113958521		TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CWH43	80157	broad.mit.edu	37	4	49032993	49032993	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXorf21	80231	broad.mit.edu	37	X	30577751	30577751	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYB5RL	606495	broad.mit.edu	37	1	54640559	54640560	+	Intron	DNP	CC	AA	AA			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP11B2	1585	broad.mit.edu	37	8	143993923	143993923	+	Intron	DEL	C	-	-			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP11B2	1585	broad.mit.edu	37	8	143994258	143994258	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP26B1	56603	broad.mit.edu	37	2	72359733	72359733	+	Missense_Mutation	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP2A13	1553	broad.mit.edu	37	19	41594960	41594960	+	Nonsense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP4F22	126410	broad.mit.edu	37	19	15658844	15658844	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP4V2	285440	broad.mit.edu	37	4	187115681	187115681	+	Missense_Mutation	SNP	C	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP7A1	1581	broad.mit.edu	37	8	59410881	59410881	+	Silent	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYTSB	92521	broad.mit.edu	37	17	20135731	20135731	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYYR1	116159	broad.mit.edu	37	21	27945088	27945088	+	Intron	SNP	A	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAB1	1600	broad.mit.edu	37	1	58514585	58514585	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAGLA	747	broad.mit.edu	37	11	61511175	61511175	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DBF4B	80174	broad.mit.edu	37	17	42818823	42818823	+	Intron	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF12	25853	broad.mit.edu	37	9	34126444	34126444	+	5'UTR	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF4L2	138009	broad.mit.edu	37	8	88885435	88885435	+	Nonsense_Mutation	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF4L2	138009	broad.mit.edu	37	8	88885437	88885437	+	Missense_Mutation	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF5	8816	broad.mit.edu	37	14	69521308	69521308	+	Missense_Mutation	SNP	T	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF8L2	347442	broad.mit.edu	37	X	27765055	27765055	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCHS2	54798	broad.mit.edu	37	4	155295093	155295093	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCT	1638	broad.mit.edu	37	13	95092211	95092211	+	Nonsense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX42	11325	broad.mit.edu	37	17	61890703	61890703	+	Silent	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX4	54514	broad.mit.edu	37	5	55059044	55059044	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND2C	163259	broad.mit.edu	37	1	115079437	115079437	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKK	139189	broad.mit.edu	37	X	50127908	50127908	+	Intron	DEL	G	-	-			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIAPH1	1729	broad.mit.edu	37	5	140957954	140957954	+	Intron	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIP2A	23181	broad.mit.edu	37	21	47985608	47985608	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIP2C	22982	broad.mit.edu	37	10	408656	408656	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLD	1738	broad.mit.edu	37	7	107557757	107557757	+	Silent	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLG2	1740	broad.mit.edu	37	11	84732529	84732530	+	Intron	DNP	AC	GT	GT			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLGAP4	22839	broad.mit.edu	37	20	35060432	35060433	+	Missense_Mutation	DNP	CC	AA	AA	rs144799810		TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMBT1	1755	broad.mit.edu	37	10	124385351	124385351	+	Intron	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMD	1756	broad.mit.edu	37	X	32430021	32430021	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH7	56171	broad.mit.edu	37	2	196722014	196722014	+	Intron	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11568095	11568095	+	Intron	SNP	C	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11584038	11584038	+	Splice_Site	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11827025	11827025	+	Intron	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJB8	165721	broad.mit.edu	37	3	128181837	128181837	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJB9	4189	broad.mit.edu	37	7	108213544	108213544	+	Missense_Mutation	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC10	54431	broad.mit.edu	37	2	183605029	183605029	+	Missense_Mutation	SNP	C	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC22	79962	broad.mit.edu	37	12	49742618	49742618	+	5'UTR	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAL1	83544	broad.mit.edu	37	14	74125618	74125618	+	Missense_Mutation	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK1	1793	broad.mit.edu	37	10	129172391	129172391	+	Silent	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK3	1795	broad.mit.edu	37	3	50757269	50757269	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOLPP1	57171	broad.mit.edu	37	9	131848960	131848960	+	Intron	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP3	10072	broad.mit.edu	37	11	66252768	66252768	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP6	1804	broad.mit.edu	37	7	154379836	154379836	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPPA5	340168	broad.mit.edu	37	6	74063858	74063858	+	Silent	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPY19L2	283417	broad.mit.edu	37	12	64055011	64055011	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPYD	1806	broad.mit.edu	37	1	98058934	98058934	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DR1	1810	broad.mit.edu	37	1	93812179	93812179	+	5'UTR	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSCAM	1826	broad.mit.edu	37	21	41384892	41384893	+	3'UTR	INS	-	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DTX1	1840	broad.mit.edu	37	12	113515322	113515322	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DTX4	23220	broad.mit.edu	37	11	58949516	58949516	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUOX2	50506	broad.mit.edu	37	15	45404928	45404928	+	Intron	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUS2L	54920	broad.mit.edu	37	16	68104916	68104916	+	Missense_Mutation	SNP	G	T	T	rs150098325		TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP22	56940	broad.mit.edu	37	6	348664	348664	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP22	56940	broad.mit.edu	37	6	348673	348673	+	Intron	DEL	G	-	-			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP22	56940	broad.mit.edu	37	6	350824	350824	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUXA	503835	broad.mit.edu	37	19	57670500	57670500	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNC1H1	1778	broad.mit.edu	37	14	102461090	102461090	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYSF	8291	broad.mit.edu	37	2	71743361	71743361	+	Missense_Mutation	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EBF1	1879	broad.mit.edu	37	5	158500252	158500252	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ECEL1	9427	broad.mit.edu	37	2	233345169	233345169	+	Missense_Mutation	SNP	C	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFCAB10	100130771	broad.mit.edu	37	7	105223386	105223386	+	5'Flank	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFCAB5	374786	broad.mit.edu	37	17	28380882	28380882	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFHA2	286097	broad.mit.edu	37	8	16948092	16948092	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EHMT1	79813	broad.mit.edu	37	9	140611370	140611370	+	Missense_Mutation	SNP	C	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF3B	8662	broad.mit.edu	37	7	2402421	2402421	+	Intron	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF4G1	1981	broad.mit.edu	37	3	184039223	184039223	+	Missense_Mutation	SNP	C	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF4G1	1981	broad.mit.edu	37	3	184039251	184039251	+	Missense_Mutation	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELF1	1997	broad.mit.edu	37	13	41567353	41567353	+	Intron	SNP	G	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELFN2	114794	broad.mit.edu	37	22	37771374	37771374	+	Silent	SNP	G	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELN	2006	broad.mit.edu	37	7	73482908	73482908	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELOF1	84337	broad.mit.edu	37	19	11664687	11664687	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EMR1	2015	broad.mit.edu	37	19	6921732	6921732	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENGASE	64772	broad.mit.edu	37	17	77079624	77079624	+	Silent	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENPP3	5169	broad.mit.edu	37	6	132054860	132054860	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EP400	57634	broad.mit.edu	37	12	132516359	132516359	+	Intron	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA3	2042	broad.mit.edu	37	3	89259557	89259557	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA3	2042	broad.mit.edu	37	3	89478163	89478163	+	Intron	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA8	2046	broad.mit.edu	37	1	22902862	22902870	+	In_Frame_Del	DEL	CCTGCGCGA	-	-			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB1	2047	broad.mit.edu	37	3	134968361	134968361	+	Intron	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPS8L2	64787	broad.mit.edu	37	11	722597	722597	+	Intron	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERBB2	2064	broad.mit.edu	37	17	37866776	37866776	+	Intron	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERBB3	2065	broad.mit.edu	37	12	56495852	56495852	+	3'UTR	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERCC4	2072	broad.mit.edu	37	16	14028125	14028125	+	Silent	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERI3	79033	broad.mit.edu	37	1	44804524	44804524	+	Intron	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESPL1	9700	broad.mit.edu	37	12	53682786	53682786	+	Intron	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESPNP	284729	broad.mit.edu	37	1	17023377	17023377	+	Nonsense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EYA1	2138	broad.mit.edu	37	8	72229718	72229718	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EYA4	2070	broad.mit.edu	37	6	133802682	133802682	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EYA4	2070	broad.mit.edu	37	6	133833817	133833817	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAIM2	23017	broad.mit.edu	37	12	50282944	50282944	+	Silent	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM131B	9715	broad.mit.edu	37	7	143056027	143056027	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM135B	51059	broad.mit.edu	37	8	139165270	139165270	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM154A	158297	broad.mit.edu	37	9	18941835	18941835	+	Missense_Mutation	SNP	C	A	A	rs149549686		TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM183B	340286	broad.mit.edu	37	7	38725088	38725088	+	3'UTR	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM19A1	407738	broad.mit.edu	37	3	68055731	68055731	+	Intron	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM21C	253725	broad.mit.edu	37	10	46281164	46281164	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM26F	441168	broad.mit.edu	37	6	116784347	116784347	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM3D	131177	broad.mit.edu	37	3	58621920	58621920	+	Intron	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM47B	170062	broad.mit.edu	37	X	34961437	34961437	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM55D	54827	broad.mit.edu	37	11	114441811	114441811	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM65B	9750	broad.mit.edu	37	6	25023946	25023946	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM66D	100132923	broad.mit.edu	37	8	12232655	12232655	+	Intron	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM66E	100132103	broad.mit.edu	37	8	7835065	7835065	+	Intron	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM75A6	389730	broad.mit.edu	37	9	43625036	43625036	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM82B	51115	broad.mit.edu	37	8	87494871	87494871	+	Intron	SNP	G	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FANCA	2175	broad.mit.edu	37	16	89857781	89857781	+	Intron	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FANCG	2189	broad.mit.edu	37	9	35078407	35078407	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAR2	55711	broad.mit.edu	37	12	29474839	29474839	+	Silent	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FARP2	9855	broad.mit.edu	37	2	242429445	242429445	+	Missense_Mutation	SNP	C	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT1	2195	broad.mit.edu	37	4	187557842	187557842	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT2	2196	broad.mit.edu	37	5	150905491	150905491	+	Silent	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT3	120114	broad.mit.edu	37	11	92495238	92495238	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT4	79633	broad.mit.edu	37	4	126240578	126240578	+	Silent	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCGBP	8857	broad.mit.edu	37	19	40412002	40412002	+	Missense_Mutation	SNP	C	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCGR3A	2214	broad.mit.edu	37	1	161518430	161518430	+	Missense_Mutation	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCGR3B	2215	broad.mit.edu	37	1	161600996	161600996	+	5'UTR	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRL3	115352	broad.mit.edu	37	1	157670161	157670161	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FER1L6	654463	broad.mit.edu	37	8	125072897	125072897	+	Nonsense_Mutation	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGD5	152273	broad.mit.edu	37	3	14862143	14862143	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGFBP2	83888	broad.mit.edu	37	4	15964478	15964478	+	Nonsense_Mutation	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGFR2	2263	broad.mit.edu	37	10	123279674	123279674	+	Missense_Mutation	SNP	G	A	A	rs77543610		TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FHOD3	80206	broad.mit.edu	37	18	34298531	34298531	+	Nonsense_Mutation	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG2	388698	broad.mit.edu	37	1	152326607	152326608	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ43950	347127	broad.mit.edu	37	9	84531000	84531000	+	Silent	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ44082	389762	broad.mit.edu	37	9	84564680	84564680	+	3'UTR	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ46321	389763	broad.mit.edu	37	9	84607070	84607070	+	Missense_Mutation	SNP	C	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLNC	2318	broad.mit.edu	37	7	128487051	128487051	+	Intron	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLT4	2324	broad.mit.edu	37	5	180048007	180048007	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMN2	56776	broad.mit.edu	37	1	240371074	240371074	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMNL1	752	broad.mit.edu	37	17	43323889	43323889	+	Missense_Mutation	SNP	T	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMNL2	114793	broad.mit.edu	37	2	153437457	153437457	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FNBP4	23360	broad.mit.edu	37	11	47772419	47772419	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FNIP1	96459	broad.mit.edu	37	5	131007483	131007483	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOSB	2354	broad.mit.edu	37	19	45976290	45976290	+	3'UTR	SNP	C	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXC2	2303	broad.mit.edu	37	16	86601062	86601062	+	Missense_Mutation	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXN3	1112	broad.mit.edu	37	14	89647103	89647103	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRG1B	284802	broad.mit.edu	37	20	29632690	29632690	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMPD4	9758	broad.mit.edu	37	X	12736249	12736249	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRZB	2487	broad.mit.edu	37	2	183699582	183699582	+	Silent	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSTL5	56884	broad.mit.edu	37	4	162307217	162307217	+	Silent	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAB3	139716	broad.mit.edu	37	X	153927854	153927854	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRA5	2558	broad.mit.edu	37	15	27182439	27182439	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRB1	2560	broad.mit.edu	37	4	47034433	47034433	+	Splice_Site	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRB1	2560	broad.mit.edu	37	4	47408916	47408916	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRB3	2562	broad.mit.edu	37	15	26806027	26806027	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRB3	2562	broad.mit.edu	37	15	26866615	26866615	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRG2	2566	broad.mit.edu	37	5	161524813	161524813	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRP	2568	broad.mit.edu	37	5	170235643	170235643	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAD2	2572	broad.mit.edu	37	10	26558193	26558193	+	Intron	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNS	2588	broad.mit.edu	37	16	88902642	88902642	+	Silent	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNTL2	117248	broad.mit.edu	37	3	16261085	16261086	+	Intron	DNP	CC	AA	AA			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNTL6	442117	broad.mit.edu	37	4	173804035	173804035	+	Nonsense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GATSL3	652968	broad.mit.edu	37	22	30683290	30683290	+	Intron	SNP	G	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCKR	2646	broad.mit.edu	37	2	27730148	27730148	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GDF10	2662	broad.mit.edu	37	10	48429174	48429174	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GFPT2	9945	broad.mit.edu	37	5	179729392	179729392	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GGPS1	9453	broad.mit.edu	37	1	235505515	235505515	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GINS3	64785	broad.mit.edu	37	16	58437222	58437222	+	Missense_Mutation	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GMDS	2762	broad.mit.edu	37	6	2117778	2117778	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GMIP	51291	broad.mit.edu	37	19	19749277	19749277	+	Silent	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GML	2765	broad.mit.edu	37	8	143927822	143927822	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLGA2B	55592	broad.mit.edu	37	12	100564722	100564722	+	5'UTR	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLGA6C	653641	broad.mit.edu	37	15	75557766	75557766	+	Splice_Site	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOSR2	9570	broad.mit.edu	37	17	45096789	45096789	+	Intron	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPA33	10223	broad.mit.edu	37	1	167032937	167032937	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPC6	10082	broad.mit.edu	37	13	95034836	95034836	+	Intron	SNP	G	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPD1L	23171	broad.mit.edu	37	3	32207310	32207310	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPM6A	2823	broad.mit.edu	37	4	176622815	176622815	+	Silent	SNP	A	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPM6B	2824	broad.mit.edu	37	X	13825814	13825814	+	Intron	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR112	139378	broad.mit.edu	37	X	135429849	135429849	+	Silent	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR158	57512	broad.mit.edu	37	10	25886839	25886839	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPRC5B	51704	broad.mit.edu	37	16	19883228	19883228	+	Missense_Mutation	SNP	T	A	A	rs145563587	byFrequency	TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPSM1	26086	broad.mit.edu	37	9	139250962	139250962	+	Missense_Mutation	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRHL2	79977	broad.mit.edu	37	8	102586052	102586052	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIA1	2890	broad.mit.edu	37	5	153065836	153065836	+	Silent	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSG1L	146395	broad.mit.edu	37	16	27802775	27802775	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSTA5	221357	broad.mit.edu	37	6	52712788	52712788	+	5'Flank	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTPBP10	85865	broad.mit.edu	37	7	89975947	89975947	+	5'Flank	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GZMH	2999	broad.mit.edu	37	14	25076845	25076845	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HBG2	3048	broad.mit.edu	37	11	5275539	5275539	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HCFC2	29915	broad.mit.edu	37	12	104476242	104476242	+	Intron	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC9	9734	broad.mit.edu	37	7	18705919	18705919	+	Silent	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR5A	25938	broad.mit.edu	37	14	31774347	31774347	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR5B	54497	broad.mit.edu	37	2	37289111	37289111	+	Nonsense_Mutation	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEG1	57493	broad.mit.edu	37	3	124720857	124720857	+	Splice_Site	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEPH	9843	broad.mit.edu	37	X	65413396	65413396	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC2	8924	broad.mit.edu	37	15	28427530	28427530	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC2	8924	broad.mit.edu	37	15	28474639	28474639	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEY2	23493	broad.mit.edu	37	6	126080786	126080786	+	Silent	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HGF	3082	broad.mit.edu	37	7	81374416	81374416	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HKDC1	80201	broad.mit.edu	37	10	71021127	71021127	+	Intron	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HLA-DPB1	3115	broad.mit.edu	37	6	33095795	33095795	+	Intron	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HLA-G	3135	broad.mit.edu	37	6	29857397	29857397	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMMR	3161	broad.mit.edu	37	5	162918138	162918138	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNRNPM	4670	broad.mit.edu	37	19	8527445	8527445	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNRNPR	10236	broad.mit.edu	37	1	23637569	23637569	+	Intron	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXA4	3201	broad.mit.edu	37	7	27169274	27169274	+	Intron	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXC10	3226	broad.mit.edu	37	12	54379623	54379623	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXD3	3232	broad.mit.edu	37	2	177033942	177033942	+	Missense_Mutation	SNP	T	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HPSE2	60495	broad.mit.edu	37	10	100503814	100503814	+	Splice_Site	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRH2	3274	broad.mit.edu	37	5	175111326	175111326	+	3'UTR	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPA2	3306	broad.mit.edu	37	14	65008744	65008744	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR1F	3355	broad.mit.edu	37	3	88040364	88040364	+	Silent	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR2A	3356	broad.mit.edu	37	13	47409209	47409209	+	Silent	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR2A	3356	broad.mit.edu	37	13	47466626	47466626	+	Missense_Mutation	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HYDIN	54768	broad.mit.edu	37	16	70884565	70884565	+	Intron	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HYDIN	54768	broad.mit.edu	37	16	70975570	70975570	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HYDIN	54768	broad.mit.edu	37	16	71007878	71007878	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFNA17	3451	broad.mit.edu	37	9	21227612	21227612	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL18RAP	8807	broad.mit.edu	37	2	103068613	103068613	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1F9	56300	broad.mit.edu	37	2	113738708	113738708	+	Intron	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1RAPL1	11141	broad.mit.edu	37	X	29938104	29938104	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL23R	149233	broad.mit.edu	37	1	67724401	67724401	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL28B	282617	broad.mit.edu	37	19	39734553	39734553	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL2RA	3559	broad.mit.edu	37	10	6104076	6104076	+	Silent	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL4R	3566	broad.mit.edu	37	16	27357723	27357723	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INTS1	26173	broad.mit.edu	37	7	1539273	1539273	+	Intron	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPO8	10526	broad.mit.edu	37	12	30784831	30784831	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQCE	23288	broad.mit.edu	37	7	2611710	2611710	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRX5	10265	broad.mit.edu	37	16	54966343	54966343	+	Intron	SNP	T	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ISL1	3670	broad.mit.edu	37	5	50687313	50687313	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA3	3675	broad.mit.edu	37	17	48166490	48166490	+	3'UTR	SNP	G	T	T	rs139083066	byFrequency	TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA7	3679	broad.mit.edu	37	12	56078798	56078798	+	3'UTR	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA8	8516	broad.mit.edu	37	10	15649716	15649716	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITIH2	3698	broad.mit.edu	37	10	7763016	7763016	+	Intron	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITLN1	55600	broad.mit.edu	37	1	160851656	160851656	+	Intron	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITPR1	3708	broad.mit.edu	37	3	4715184	4715184	+	Intron	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KALRN	8997	broad.mit.edu	37	3	124378374	124378374	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KBTBD5	131377	broad.mit.edu	37	3	42730470	42730470	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNC2	3747	broad.mit.edu	37	12	75601598	75601598	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH3	23416	broad.mit.edu	37	12	49937199	49937199	+	Missense_Mutation	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH4	23415	broad.mit.edu	37	17	40312458	40312458	+	Intron	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNK10	54207	broad.mit.edu	37	14	88693646	88693646	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNT2	343450	broad.mit.edu	37	1	196227561	196227561	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNT2	343450	broad.mit.edu	37	1	196303087	196303087	+	Frame_Shift_Del	DEL	A	-	-			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNT2	343450	broad.mit.edu	37	1	196395074	196395074	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM4C	23081	broad.mit.edu	37	9	6814718	6814718	+	Silent	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0195	9772	broad.mit.edu	37	17	73494186	73494186	+	Intron	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0427	9811	broad.mit.edu	37	18	46385872	46385872	+	Missense_Mutation	SNP	C	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0895	23366	broad.mit.edu	37	7	36396649	36396649	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0947	23379	broad.mit.edu	37	5	5454709	5454709	+	Missense_Mutation	SNP	A	T	T	rs34789072		TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1009	22832	broad.mit.edu	37	6	84872875	84872875	+	Missense_Mutation	SNP	C	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1826	84437	broad.mit.edu	37	11	105881245	105881245	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF1B	23095	broad.mit.edu	37	1	10355764	10355764	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF26B	55083	broad.mit.edu	37	1	245530707	245530707	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF5A	3798	broad.mit.edu	37	12	57957545	57957545	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIFC1	3833	broad.mit.edu	37	6	33367932	33367932	+	Intron	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIFC1	3833	broad.mit.edu	37	6	33371703	33371703	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLK1	3816	broad.mit.edu	37	19	51327105	51327105	+	5'Flank	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KL	9365	broad.mit.edu	37	13	33628269	33628269	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KNDC1	85442	broad.mit.edu	37	10	135020313	135020313	+	Intron	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KPNB1	3837	broad.mit.edu	37	17	45748181	45748181	+	Silent	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT31	3881	broad.mit.edu	37	17	39553533	39553533	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP10-2	386679	broad.mit.edu	37	21	45971197	45971197	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP19-8	728299	broad.mit.edu	37	21	32410763	32410763	+	5'UTR	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KSR2	283455	broad.mit.edu	37	12	118105377	118105377	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KYNU	8942	broad.mit.edu	37	2	143799619	143799619	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LACTB	114294	broad.mit.edu	37	15	63414824	63414824	+	Intron	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LALBA	3906	broad.mit.edu	37	12	48963044	48963044	+	Intron	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA2	3908	broad.mit.edu	37	6	129478613	129478613	+	Intron	SNP	C	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMB1	3912	broad.mit.edu	37	7	107642135	107642135	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMB2	3913	broad.mit.edu	37	3	49168500	49168500	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMC3	10319	broad.mit.edu	37	9	133901990	133901990	+	Intron	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCE2B	26239	broad.mit.edu	37	1	152659201	152659201	+	Intron	SNP	C	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCP2	3937	broad.mit.edu	37	5	169714976	169714976	+	Silent	SNP	C	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCT	3938	broad.mit.edu	37	2	136562311	136562311	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCT	3938	broad.mit.edu	37	2	136570111	136570111	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEF1	51176	broad.mit.edu	37	4	109086205	109086205	+	Intron	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEPREL2	10536	broad.mit.edu	37	12	6948210	6948210	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LETMD1	25875	broad.mit.edu	37	12	51443033	51443033	+	Intron	SNP	A	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGALS9B	284194	broad.mit.edu	37	17	20358672	20358672	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGR5	8549	broad.mit.edu	37	12	71834077	71834077	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMF1	64788	broad.mit.edu	37	16	929612	929612	+	Silent	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMNA	4000	broad.mit.edu	37	1	156104873	156104873	+	Intron	SNP	T	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMX1B	4010	broad.mit.edu	37	9	129376824	129376824	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC644165	644165	broad.mit.edu	37	22	25041637	25041637	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC647288	647288	broad.mit.edu	37	13	75814465	75814465	+	Silent	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC96610	96610	broad.mit.edu	37	22	22469218	22469218	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPCAT1	79888	broad.mit.edu	37	5	1474683	1474683	+	Silent	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPHN2	23266	broad.mit.edu	37	1	81892935	81892935	+	Intron	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPHN3	23284	broad.mit.edu	37	4	62897253	62897253	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRCH3	84859	broad.mit.edu	37	3	197553671	197553671	+	Intron	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRIG3	121227	broad.mit.edu	37	12	59276602	59276602	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141607774	141607774	+	Silent	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141641558	141641558	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP2	4036	broad.mit.edu	37	2	169985301	169985301	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP2	4036	broad.mit.edu	37	2	170103295	170103295	+	Missense_Mutation	SNP	C	A	A	rs147058423	byFrequency	TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC7	57554	broad.mit.edu	37	1	70385469	70385469	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC8C	84230	broad.mit.edu	37	1	90178352	90178352	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC8D	55144	broad.mit.edu	37	1	90399291	90399291	+	Nonsense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRTM1	347730	broad.mit.edu	37	2	80530357	80530357	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LTBP1	4052	broad.mit.edu	37	2	33505174	33505174	+	Nonsense_Mutation	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LTBP4	8425	broad.mit.edu	37	19	41113371	41113371	+	Missense_Mutation	SNP	C	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LUZP4	51213	broad.mit.edu	37	X	114540964	114540964	+	Missense_Mutation	SNP	G	T	T	rs2232735	byFrequency;by1000genomes	TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYN	4067	broad.mit.edu	37	8	56910873	56910873	+	Intron	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYPD1	116372	broad.mit.edu	37	2	133425898	133425898	+	Intron	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LZTS1	11178	broad.mit.edu	37	8	20110255	20110255	+	Intron	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEA10	4109	broad.mit.edu	37	X	151302988	151302988	+	Nonsense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEC1	9947	broad.mit.edu	37	X	140994298	140994298	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEC3	139081	broad.mit.edu	37	X	140984766	140984766	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGI2	9863	broad.mit.edu	37	7	78150963	78150963	+	Splice_Site	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MALAT1	378938	broad.mit.edu	37	11	65268496	65268496	+	RNA	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP2K5	5607	broad.mit.edu	37	15	67920408	67920408	+	Intron	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP7D3	79649	broad.mit.edu	37	X	135303096	135303096	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPKAPK5	8550	broad.mit.edu	37	12	112326315	112326315	+	Silent	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCH11	441061	broad.mit.edu	37	5	16177732	16177732	+	Intron	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCO	8685	broad.mit.edu	37	2	119750829	119750829	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCO	8685	broad.mit.edu	37	2	119752155	119752155	+	3'UTR	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAT2B	27430	broad.mit.edu	37	5	162940737	162940737	+	Intron	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MC5R	4161	broad.mit.edu	37	18	13825819	13825819	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCART6	401612	broad.mit.edu	37	X	103349993	103349993	+	Intron	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCF2L	23263	broad.mit.edu	37	13	113714873	113714873	+	Intron	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCM10	55388	broad.mit.edu	37	10	13239666	13239666	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCM5	4174	broad.mit.edu	37	22	35813679	35813679	+	Intron	SNP	C	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDGA1	266727	broad.mit.edu	37	6	37620084	37620084	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED1	5469	broad.mit.edu	37	17	37566045	37566045	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED30	90390	broad.mit.edu	37	8	118540906	118540906	+	Missense_Mutation	SNP	C	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEIS2	4212	broad.mit.edu	37	15	37184257	37184257	+	3'UTR	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAM	8972	broad.mit.edu	37	7	141767216	141767216	+	Intron	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAM	8972	broad.mit.edu	37	7	141795597	141795597	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGC87042	256227	broad.mit.edu	37	7	22532984	22532984	+	Nonsense_Mutation	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIP	4284	broad.mit.edu	37	12	56845342	56845342	+	Intron	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIP	4284	broad.mit.edu	37	12	56846752	56846752	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIP	4284	broad.mit.edu	37	12	56848062	56848062	+	Silent	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR1269	100302177	broad.mit.edu	37	4	67142342	67142342	+	5'Flank	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR548A3	693127	broad.mit.edu	37	8	105496842	105496842	+	5'Flank	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR890	100126303	broad.mit.edu	37	X	145075804	145075804	+	RNA	SNP	C	A	A	rs138166791	by1000genomes	TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLH1	4292	broad.mit.edu	37	3	37057967	37057967	+	Intron	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL3	58508	broad.mit.edu	37	7	151874238	151874238	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLLT3	4300	broad.mit.edu	37	9	20354792	20354792	+	Intron	SNP	G	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP16	4325	broad.mit.edu	37	8	89086777	89086777	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP27	64066	broad.mit.edu	37	11	102562551	102562551	+	Silent	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MNDA	4332	broad.mit.edu	37	1	158817415	158817415	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MORC1	27136	broad.mit.edu	37	3	108813939	108813939	+	Intron	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPEG1	219972	broad.mit.edu	37	11	58978321	58978321	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPEG1	219972	broad.mit.edu	37	11	58980169	58980169	+	Missense_Mutation	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPO	4353	broad.mit.edu	37	17	56355387	56355387	+	Silent	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRGPRF	116535	broad.mit.edu	37	11	68777376	68777376	+	5'UTR	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRGPRF	116535	broad.mit.edu	37	11	68777421	68777421	+	Translation_Start_Site	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPL14	64928	broad.mit.edu	37	6	44081627	44081627	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPS17	51373	broad.mit.edu	37	7	56022592	56022592	+	Intron	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRS2	57380	broad.mit.edu	37	6	24418936	24418936	+	Intron	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MS4A1	931	broad.mit.edu	37	11	60230467	60230467	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MST1P2	11209	broad.mit.edu	37	1	16973893	16973893	+	RNA	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTHFR	4524	broad.mit.edu	37	1	11853947	11853947	+	Intron	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTHFSD	64779	broad.mit.edu	37	16	86575299	86575299	+	Intron	SNP	C	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR11	10903	broad.mit.edu	37	1	149907354	149907354	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTNR1B	4544	broad.mit.edu	37	11	92714402	92714402	+	Intron	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTUS1	57509	broad.mit.edu	37	8	17612649	17612649	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9038377	9038377	+	Intron	SNP	C	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC17	140453	broad.mit.edu	37	7	100674548	100674548	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC21	394263	broad.mit.edu	37	6	30955046	30955047	+	Nonsense_Mutation	DNP	CC	AA	AA			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYBPC2	4606	broad.mit.edu	37	19	50946953	50946953	+	Intron	DEL	C	-	-			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH11	4629	broad.mit.edu	37	16	15838971	15838971	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH13	8735	broad.mit.edu	37	17	10248473	10248473	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH13	8735	broad.mit.edu	37	17	10267634	10267634	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH14	79784	broad.mit.edu	37	19	50804968	50804968	+	Silent	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH7	4625	broad.mit.edu	37	14	23898980	23898980	+	Intron	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH9	4627	broad.mit.edu	37	22	36737461	36737462	+	Frame_Shift_Ins	INS	-	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYL7	58498	broad.mit.edu	37	7	44179887	44179887	+	Intron	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO18B	84700	broad.mit.edu	37	22	26343716	26343716	+	Silent	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO3A	53904	broad.mit.edu	37	10	26454991	26454991	+	Intron	SNP	C	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO7B	4648	broad.mit.edu	37	2	128324254	128324254	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOCD	93649	broad.mit.edu	37	17	12656601	12656601	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOF	26509	broad.mit.edu	37	10	95123702	95123702	+	Intron	SNP	G	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAAA	27163	broad.mit.edu	37	4	76841001	76841001	+	Intron	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NALCN	259232	broad.mit.edu	37	13	101833673	101833673	+	Intron	SNP	G	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NALCN	259232	broad.mit.edu	37	13	102051499	102051499	+	5'UTR	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAT8	9027	broad.mit.edu	37	2	73868332	73868332	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV3	89795	broad.mit.edu	37	12	78334186	78334186	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBL1	4681	broad.mit.edu	37	1	19983389	19983389	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCAPD3	23310	broad.mit.edu	37	11	134047106	134047106	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCOA1	8648	broad.mit.edu	37	2	24929492	24929492	+	Silent	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCOR2	9612	broad.mit.edu	37	12	124886833	124886833	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDST4	64579	broad.mit.edu	37	4	115749058	115749058	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDUFB4	4710	broad.mit.edu	37	3	120320105	120320105	+	Splice_Site	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDUFB5	4711	broad.mit.edu	37	3	179334850	179334850	+	Intron	SNP	A	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEB	4703	broad.mit.edu	37	2	152528873	152528873	+	Intron	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NELL1	4745	broad.mit.edu	37	11	20949926	20949926	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NELL2	4753	broad.mit.edu	37	12	44926385	44926385	+	Missense_Mutation	SNP	G	T	T	rs80147310		TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEO1	4756	broad.mit.edu	37	15	73541487	73541487	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEURL	9148	broad.mit.edu	37	10	105331369	105331369	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEUROD6	63974	broad.mit.edu	37	7	31378648	31378648	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFKBIL2	4796	broad.mit.edu	37	8	145660445	145660445	+	Silent	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NHEDC1	150159	broad.mit.edu	37	4	103822347	103822347	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NIPAL2	79815	broad.mit.edu	37	8	99264812	99264812	+	Silent	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NIPBL	25836	broad.mit.edu	37	5	37052708	37052708	+	Intron	SNP	C	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NKD2	85409	broad.mit.edu	37	5	1037837	1037837	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLGN4X	57502	broad.mit.edu	37	X	5827164	5827164	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRC5	84166	broad.mit.edu	37	16	57077251	57077251	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP12	91662	broad.mit.edu	37	19	54301630	54301630	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP13	126204	broad.mit.edu	37	19	56422946	56422946	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP3	114548	broad.mit.edu	37	1	247587738	247587738	+	Silent	SNP	C	T	T	rs104895401		TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP7	199713	broad.mit.edu	37	19	55447801	55447801	+	Splice_Site	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NMNAT2	23057	broad.mit.edu	37	1	183273670	183273670	+	Intron	SNP	A	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NMS	129521	broad.mit.edu	37	2	101093780	101093780	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOS2	4843	broad.mit.edu	37	17	26093499	26093499	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOS2	4843	broad.mit.edu	37	17	26109073	26109073	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOTCH3	4854	broad.mit.edu	37	19	15281392	15281392	+	Intron	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOV	4856	broad.mit.edu	37	8	120430581	120430581	+	Intron	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPHP1	4867	broad.mit.edu	37	2	110901029	110901029	+	Intron	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPR3	4883	broad.mit.edu	37	5	32774653	32774653	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPR3	4883	broad.mit.edu	37	5	32786323	32786323	+	Intron	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR1I2	8856	broad.mit.edu	37	3	119501542	119501542	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR1I2	8856	broad.mit.edu	37	3	119501544	119501544	+	Intron	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR1I2	8856	broad.mit.edu	37	3	119501603	119501603	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR3C1	2908	broad.mit.edu	37	5	142779852	142779852	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRAS	4893	broad.mit.edu	37	1	115256529	115256529	+	Missense_Mutation	SNP	T	A	A	rs11554290		TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN1	9378	broad.mit.edu	37	2	50280416	50280416	+	Missense_Mutation	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN1	9378	broad.mit.edu	37	2	50280420	50280420	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN1	9378	broad.mit.edu	37	2	50850508	50850508	+	Nonsense_Mutation	SNP	C	A	A	rs34326676		TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSUN2	54888	broad.mit.edu	37	5	6632141	6632141	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTNG1	22854	broad.mit.edu	37	1	107950604	107950604	+	Intron	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTRK3	4916	broad.mit.edu	37	15	88678345	88678345	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTRK3	4916	broad.mit.edu	37	15	88678354	88678354	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP153	9972	broad.mit.edu	37	6	17661804	17661804	+	Intron	DEL	C	-	-			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP210L	91181	broad.mit.edu	37	1	154076748	154076748	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP210	23225	broad.mit.edu	37	3	13361423	13361423	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NYNRIN	57523	broad.mit.edu	37	14	24884816	24884816	+	Silent	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10C1	442194	broad.mit.edu	37	6	29408414	29408414	+	Missense_Mutation	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10G9	219870	broad.mit.edu	37	11	123893726	123893726	+	Nonsense_Mutation	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR14A16	284532	broad.mit.edu	37	1	247978434	247978434	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR14C36	127066	broad.mit.edu	37	1	248512748	248512748	+	Silent	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1S2	219958	broad.mit.edu	37	11	57970677	57970677	+	3'UTR	SNP	C	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2A14	135941	broad.mit.edu	37	7	143826981	143826981	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2A14	135941	broad.mit.edu	37	7	143827000	143827000	+	Silent	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2B11	127623	broad.mit.edu	37	1	247614592	247614592	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2B11	127623	broad.mit.edu	37	1	247614655	247614655	+	Silent	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2F1	26211	broad.mit.edu	37	7	143657496	143657496	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2W3	343171	broad.mit.edu	37	1	248058993	248058993	+	Nonsense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR3A3	8392	broad.mit.edu	37	17	3323761	3323761	+	5'Flank	SNP	A	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4A15	81328	broad.mit.edu	37	11	55136012	55136012	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4C16	219428	broad.mit.edu	37	11	55339546	55339546	+	5'Flank	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4D9	390199	broad.mit.edu	37	11	59282373	59282373	+	5'Flank	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4Q3	441669	broad.mit.edu	37	14	20216191	20216191	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52E2	119678	broad.mit.edu	37	11	5080000	5080000	+	Silent	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5J2	282775	broad.mit.edu	37	11	55944383	55944383	+	Frame_Shift_Del	DEL	G	-	-			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6F1	343169	broad.mit.edu	37	1	247875162	247875162	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6K6	128371	broad.mit.edu	37	1	158724939	158724939	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6N1	128372	broad.mit.edu	37	1	158736121	158736121	+	Missense_Mutation	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6V1	346517	broad.mit.edu	37	7	142749355	142749355	+	5'Flank	SNP	T	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR7C2	26658	broad.mit.edu	37	19	15052430	15052430	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR7D4	125958	broad.mit.edu	37	19	9324917	9324917	+	Silent	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8B8	26493	broad.mit.edu	37	11	124310801	124310801	+	Missense_Mutation	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8K1	390157	broad.mit.edu	37	11	56114132	56114132	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8K5	219453	broad.mit.edu	37	11	55927530	55927530	+	Missense_Mutation	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ORC4L	5000	broad.mit.edu	37	2	148709899	148709899	+	Intron	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTOA	146183	broad.mit.edu	37	16	21737885	21737885	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTOL1	131149	broad.mit.edu	37	3	161221370	161221371	+	Missense_Mutation	DNP	CC	TT	TT			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OVCH1	341350	broad.mit.edu	37	12	29607733	29607733	+	Intron	SNP	C	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P2RY8	286530	broad.mit.edu	37	X	1584320	1584320	+	3'UTR	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PABPC1	26986	broad.mit.edu	37	8	101725229	101725229	+	Intron	SNP	A	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PACSIN2	11252	broad.mit.edu	37	22	43289720	43289720	+	Intron	SNP	G	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAGE2	203569	broad.mit.edu	37	X	55117812	55117812	+	Nonsense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PALLD	23022	broad.mit.edu	37	4	169612313	169612313	+	Intron	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPL	390928	broad.mit.edu	37	19	39591613	39591613	+	Silent	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPOLG	64895	broad.mit.edu	37	2	60995494	60995494	+	Intron	SNP	C	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPPA2	60676	broad.mit.edu	37	1	176525310	176525310	+	5'UTR	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPPA2	60676	broad.mit.edu	37	1	176525707	176525707	+	Silent	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPPA2	60676	broad.mit.edu	37	1	176564446	176564446	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPPA2	60676	broad.mit.edu	37	1	176640027	176640027	+	Intron	SNP	A	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARP11	57097	broad.mit.edu	37	12	3949189	3949189	+	Intron	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PBX3	5090	broad.mit.edu	37	9	128678003	128678003	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCCA	5095	broad.mit.edu	37	13	101121523	101121523	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH10	57575	broad.mit.edu	37	4	134071449	134071449	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA6	56142	broad.mit.edu	37	5	140208228	140208228	+	Missense_Mutation	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB10	56126	broad.mit.edu	37	5	140574584	140574584	+	3'UTR	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB17	54661	broad.mit.edu	37	5	140536820	140536820	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB2	56133	broad.mit.edu	37	5	140475997	140475997	+	Silent	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA12	26025	broad.mit.edu	37	5	140811758	140811758	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA5	56110	broad.mit.edu	37	5	140744720	140744720	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA6	56109	broad.mit.edu	37	5	140755658	140755658	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCK1	5105	broad.mit.edu	37	20	56139650	56139650	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCLO	27445	broad.mit.edu	37	7	82582364	82582364	+	Silent	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCNP	57092	broad.mit.edu	37	3	101304186	101304186	+	Intron	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCNXL3	399909	broad.mit.edu	37	11	65385072	65385072	+	Intron	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCNX	22990	broad.mit.edu	37	14	71495557	71495557	+	Intron	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCSK1	5122	broad.mit.edu	37	5	95748052	95748052	+	Silent	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE10A	10846	broad.mit.edu	37	6	165829541	165829541	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE11A	50940	broad.mit.edu	37	2	178528571	178528571	+	Intron	SNP	T	A	A	rs144532179	by1000genomes	TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144859668	144859668	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE5A	8654	broad.mit.edu	37	4	120548231	120548231	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE6C	5146	broad.mit.edu	37	10	95380833	95380833	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDGFRA	5156	broad.mit.edu	37	4	55127576	55127576	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDHA2	5161	broad.mit.edu	37	4	96762200	96762200	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDK1	5163	broad.mit.edu	37	2	173451116	173451116	+	Silent	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDS5A	23244	broad.mit.edu	37	4	39929778	39929778	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDSS2	57107	broad.mit.edu	37	6	107533374	107533374	+	Missense_Mutation	SNP	T	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZD2	23037	broad.mit.edu	37	5	32037441	32037441	+	Silent	SNP	C	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEG3	5178	broad.mit.edu	37	19	57327451	57327451	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PFKM	5213	broad.mit.edu	37	12	48537621	48537621	+	Intron	SNP	T	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PFKP	5214	broad.mit.edu	37	10	3124618	3124618	+	Missense_Mutation	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHACTR3	116154	broad.mit.edu	37	20	58349510	58349510	+	Missense_Mutation	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHF15	23338	broad.mit.edu	37	5	133914622	133914622	+	Frame_Shift_Del	DEL	A	-	-			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHKA1	5255	broad.mit.edu	37	X	71904453	71904453	+	Intron	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PI4KA	5297	broad.mit.edu	37	22	21158629	21158629	+	Missense_Mutation	SNP	C	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3C2G	5288	broad.mit.edu	37	12	18446954	18446954	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIWIL2	55124	broad.mit.edu	37	8	22210612	22210612	+	Silent	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD1L1	168507	broad.mit.edu	37	7	47937647	47937647	+	Nonsense_Mutation	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD2	5311	broad.mit.edu	37	4	88996906	88996906	+	3'UTR	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1L1	93035	broad.mit.edu	37	8	110424445	110424445	+	Intron	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKP2	5318	broad.mit.edu	37	12	32977151	32977151	+	Intron	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2G4D	283748	broad.mit.edu	37	15	42374529	42374529	+	Missense_Mutation	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2G4D	283748	broad.mit.edu	37	15	42376058	42376058	+	Intron	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCXD2	257068	broad.mit.edu	37	3	111426936	111426936	+	Silent	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHA3	65977	broad.mit.edu	37	2	179350531	179350531	+	Intron	SNP	G	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHG4B	153478	broad.mit.edu	37	5	163534	163534	+	Missense_Mutation	SNP	C	A	A	rs144505991	byFrequency	TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLGLA	285189	broad.mit.edu	37	2	107002687	107002687	+	5'Flank	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLG	5340	broad.mit.edu	37	6	161137586	161137586	+	Intron	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLOD3	8985	broad.mit.edu	37	7	100856219	100856219	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA1	5361	broad.mit.edu	37	3	126749082	126749082	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNB2	23654	broad.mit.edu	37	22	50716360	50716360	+	Missense_Mutation	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PMFBP1	83449	broad.mit.edu	37	16	72170249	72170249	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNLDC1	154197	broad.mit.edu	37	6	160241522	160241522	+	Silent	SNP	G	A	A	rs144377714		TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNPLA5	150379	broad.mit.edu	37	22	44280253	44280253	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLQ	10721	broad.mit.edu	37	3	121238684	121238684	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POM121L12	285877	broad.mit.edu	37	7	53103526	53103526	+	Silent	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POP4	10775	broad.mit.edu	37	19	30106349	30106349	+	3'UTR	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POTEC	388468	broad.mit.edu	37	18	14542897	14542897	+	Silent	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POTEH	23784	broad.mit.edu	37	22	16267032	16267032	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POU2F3	25833	broad.mit.edu	37	11	120175760	120175760	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POU6F2	11281	broad.mit.edu	37	7	39503654	39503654	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPFIBP1	8496	broad.mit.edu	37	12	27841066	27841066	+	Intron	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R3A	5506	broad.mit.edu	37	7	113518831	113518831	+	Silent	SNP	C	A	A	rs34610491	byFrequency;by1000genomes	TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R2B	5521	broad.mit.edu	37	5	146070805	146070805	+	Splice_Site	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R3B	28227	broad.mit.edu	37	X	306222	306222	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRB4	5545	broad.mit.edu	37	12	11035531	11035531	+	Intron	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM12	59335	broad.mit.edu	37	9	133543823	133543823	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM14	63978	broad.mit.edu	37	8	70964509	70964509	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PREX2	80243	broad.mit.edu	37	8	68956759	68956759	+	Silent	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PREX2	80243	broad.mit.edu	37	8	68989739	68989739	+	Intron	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKCB	5579	broad.mit.edu	37	16	23848659	23848659	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKD1	5587	broad.mit.edu	37	14	30135337	30135337	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRRX2	51450	broad.mit.edu	37	9	132484487	132484488	+	Intron	DNP	CG	TT	TT			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRSS37	136242	broad.mit.edu	37	7	141539040	141539040	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRSS55	203074	broad.mit.edu	37	8	10387192	10387192	+	Silent	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG6	5675	broad.mit.edu	37	19	43411745	43411745	+	Missense_Mutation	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG6	5675	broad.mit.edu	37	19	43411752	43411752	+	Missense_Mutation	SNP	T	C	C	rs144522626	byFrequency	TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG6	5675	broad.mit.edu	37	19	43430515	43430515	+	Intron	SNP	A	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG7	5676	broad.mit.edu	37	19	43430607	43430607	+	Missense_Mutation	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMB7	5695	broad.mit.edu	37	9	127177085	127177085	+	Intron	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSME2	5721	broad.mit.edu	37	14	24612995	24612995	+	Intron	SNP	A	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSME2	5721	broad.mit.edu	37	14	24614409	24614409	+	Intron	SNP	G	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSME4	23198	broad.mit.edu	37	2	54122188	54122188	+	Frame_Shift_Del	DEL	C	-	-			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTCD1	26024	broad.mit.edu	37	7	99031015	99031016	+	Frame_Shift_Ins	INS	-	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTH2R	5746	broad.mit.edu	37	2	209302472	209302472	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRC	5788	broad.mit.edu	37	1	198725263	198725263	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	8528593	8528594	+	Missense_Mutation	DNP	GA	TT	TT			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRE	5791	broad.mit.edu	37	10	129845794	129845794	+	Intron	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRT	11122	broad.mit.edu	37	20	40789982	40789983	+	Intron	DNP	GG	TT	TT			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRT	11122	broad.mit.edu	37	20	40979267	40979267	+	Splice_Site	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRT	11122	broad.mit.edu	37	20	41101140	41101140	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PXDNL	137902	broad.mit.edu	37	8	52348476	52348476	+	Intron	SNP	G	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PXDNL	137902	broad.mit.edu	37	8	52348484	52348484	+	Intron	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PYGL	5836	broad.mit.edu	37	14	51404380	51404380	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
QSOX1	5768	broad.mit.edu	37	1	180158700	180158700	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB42	115273	broad.mit.edu	37	1	28920492	28920492	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RABGGTB	5876	broad.mit.edu	37	1	76251970	76251970	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAD17	5884	broad.mit.edu	37	5	68695997	68695997	+	Splice_Site	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RALYL	138046	broad.mit.edu	37	8	85799925	85799926	+	Missense_Mutation	DNP	CC	AG	AG			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RARB	5915	broad.mit.edu	37	3	25622075	25622075	+	Silent	SNP	C	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASA3	22821	broad.mit.edu	37	13	114773056	114773056	+	Silent	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASGRF2	5924	broad.mit.edu	37	5	80369242	80369242	+	Silent	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASGRP3	25780	broad.mit.edu	37	2	33774801	33774801	+	Nonsense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBBP5	5929	broad.mit.edu	37	1	205069466	205069466	+	Intron	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBBP6	5930	broad.mit.edu	37	16	24573096	24573096	+	Intron	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM19	9904	broad.mit.edu	37	12	114260999	114260999	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBP3	5949	broad.mit.edu	37	10	48390038	48390038	+	Silent	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBPMS2	348093	broad.mit.edu	37	15	65042499	65042499	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RC3H2	54542	broad.mit.edu	37	9	125622059	125622059	+	Intron	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REG1A	5967	broad.mit.edu	37	2	79348928	79348928	+	Intron	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REG3G	130120	broad.mit.edu	37	2	79255038	79255038	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RELN	5649	broad.mit.edu	37	7	103132490	103132490	+	Intron	SNP	C	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RELN	5649	broad.mit.edu	37	7	103207069	103207069	+	Nonsense_Mutation	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REV1	51455	broad.mit.edu	37	2	100038094	100038094	+	Silent	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFTN1	23180	broad.mit.edu	37	3	16475219	16475219	+	Intron	SNP	G	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS21	431704	broad.mit.edu	37	1	192321432	192321432	+	Intron	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHBG	57127	broad.mit.edu	37	1	156347049	156347049	+	Intron	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS2	9699	broad.mit.edu	37	8	104664380	104664380	+	Intron	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS2	9699	broad.mit.edu	37	8	104778725	104778725	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS2	9699	broad.mit.edu	37	8	104897499	104897499	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS2	9699	broad.mit.edu	37	8	104897822	104897822	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS2	9699	broad.mit.edu	37	8	104898100	104898100	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS2	9699	broad.mit.edu	37	8	105001674	105001674	+	Intron	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS2	9699	broad.mit.edu	37	8	105261776	105261776	+	Silent	SNP	C	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIN1	9610	broad.mit.edu	37	11	66102525	66102525	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RLF	6018	broad.mit.edu	37	1	40701600	40701600	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF103	7844	broad.mit.edu	37	2	86832183	86832183	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF144A	9781	broad.mit.edu	37	2	7164598	7164598	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF17	56163	broad.mit.edu	37	13	25442861	25442861	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNFT1	51136	broad.mit.edu	37	17	58037548	58037548	+	Intron	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROBO1	6091	broad.mit.edu	37	3	78656193	78656193	+	Splice_Site	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROBO3	64221	broad.mit.edu	37	11	124742360	124742360	+	Silent	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROCK1	6093	broad.mit.edu	37	18	18622550	18622550	+	Frame_Shift_Del	DEL	C	-	-			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RP1L1	94137	broad.mit.edu	37	8	10466378	10466378	+	Nonsense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RP1L1	94137	broad.mit.edu	37	8	10469396	10469396	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPGRIP1L	23322	broad.mit.edu	37	16	53645031	53645031	+	Intron	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPGRIP1L	23322	broad.mit.edu	37	16	53686885	53686885	+	Missense_Mutation	SNP	T	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPGRIP1L	23322	broad.mit.edu	37	16	53721885	53721885	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RRBP1	6238	broad.mit.edu	37	20	17622340	17622340	+	Intron	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSPH10B2	728194	broad.mit.edu	37	7	5977705	5977705	+	Intron	SNP	G	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSPO2	340419	broad.mit.edu	37	8	108996156	108996156	+	Intron	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUNDC3B	154661	broad.mit.edu	37	7	87459223	87459223	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR1	6261	broad.mit.edu	37	19	38960040	38960040	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237632499	237632499	+	Intron	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237711773	237711773	+	Silent	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237729815	237729815	+	Intron	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237875121	237875121	+	Missense_Mutation	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
S1PR3	1903	broad.mit.edu	37	9	91616365	91616365	+	Missense_Mutation	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAAL1	113174	broad.mit.edu	37	11	18113861	18113861	+	Missense_Mutation	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SALL2	6297	broad.mit.edu	37	14	21990402	21990402	+	3'UTR	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCARF1	8578	broad.mit.edu	37	17	1542237	1542237	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCARNA2	677766	broad.mit.edu	37	1	109643075	109643075	+	RNA	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCGN	10590	broad.mit.edu	37	6	25652524	25652524	+	5'UTR	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCLY	51540	broad.mit.edu	37	2	238896697	238896697	+	Intron	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN1A	6323	broad.mit.edu	37	2	166847946	166847946	+	Missense_Mutation	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN1A	6323	broad.mit.edu	37	2	166848161	166848161	+	Missense_Mutation	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN1A	6323	broad.mit.edu	37	2	166894432	166894432	+	Missense_Mutation	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN2A	6326	broad.mit.edu	37	2	166170433	166170433	+	Missense_Mutation	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN4A	6329	broad.mit.edu	37	17	62049725	62049725	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC23A	10484	broad.mit.edu	37	14	39543704	39543704	+	Missense_Mutation	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC23B	10483	broad.mit.edu	37	20	18485244	18485244	+	5'Flank	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEL1L	6400	broad.mit.edu	37	14	81951977	81951977	+	Intron	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SELP	6403	broad.mit.edu	37	1	169586542	169586542	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA6A	57556	broad.mit.edu	37	5	115813658	115813658	+	Intron	SNP	T	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SENP1	29843	broad.mit.edu	37	12	48482982	48482982	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SF1	7536	broad.mit.edu	37	11	64536578	64536578	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFPQ	6421	broad.mit.edu	37	1	35652807	35652807	+	Nonsense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGPP2	130367	broad.mit.edu	37	2	223386707	223386707	+	Intron	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH2D7	646892	broad.mit.edu	37	15	78390402	78390403	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHISA4	149345	broad.mit.edu	37	1	201860534	201860534	+	Nonsense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHQ1	55164	broad.mit.edu	37	3	72799747	72799747	+	Missense_Mutation	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIRT4	23409	broad.mit.edu	37	12	120741852	120741852	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIRT5	23408	broad.mit.edu	37	6	13599137	13599137	+	Intron	SNP	T	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLAMF8	56833	broad.mit.edu	37	1	159799686	159799686	+	Missense_Mutation	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A1	6557	broad.mit.edu	37	15	48551398	48551399	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC15A4	121260	broad.mit.edu	37	12	129294483	129294483	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC17A2	10246	broad.mit.edu	37	6	25918685	25918685	+	Intron	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC17A3	10786	broad.mit.edu	37	6	25849906	25849906	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC17A4	10050	broad.mit.edu	37	6	25777132	25777132	+	Missense_Mutation	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC18A1	6570	broad.mit.edu	37	8	20003354	20003354	+	Silent	SNP	G	T	T	rs149404030		TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC1A3	6507	broad.mit.edu	37	5	36684013	36684013	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC1A3	6507	broad.mit.edu	37	5	36686154	36686154	+	Intron	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A13	9390	broad.mit.edu	37	3	38317702	38317702	+	Intron	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC2A4RG	56731	broad.mit.edu	37	20	62372846	62372846	+	Intron	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC30A8	169026	broad.mit.edu	37	8	118159363	118159363	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC32A1	140679	broad.mit.edu	37	20	37356308	37356308	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC39A12	221074	broad.mit.edu	37	10	18280241	18280241	+	Intron	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC39A4	55630	broad.mit.edu	37	8	145641555	145641555	+	Intron	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A11	83959	broad.mit.edu	37	20	3214271	3214271	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A1AP	22950	broad.mit.edu	37	2	27905082	27905082	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A4	8671	broad.mit.edu	37	4	72332163	72332163	+	Silent	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A11	115584	broad.mit.edu	37	16	24902456	24902456	+	Intron	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A7	60482	broad.mit.edu	37	2	108626708	108626708	+	Silent	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A8	160728	broad.mit.edu	37	12	101577997	101577997	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A18	348932	broad.mit.edu	37	5	1244963	1244963	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC7A3	84889	broad.mit.edu	37	X	70148047	70148047	+	Silent	SNP	T	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC8A1	6546	broad.mit.edu	37	2	40342676	40342676	+	Missense_Mutation	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A2	6549	broad.mit.edu	37	2	103300683	103300683	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A9	285195	broad.mit.edu	37	3	142985603	142985603	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO1C1	53919	broad.mit.edu	37	12	20864455	20864455	+	Intron	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO5A1	81796	broad.mit.edu	37	8	70585498	70585498	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT3	6586	broad.mit.edu	37	5	168175277	168175277	+	Intron	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLITRK1	114798	broad.mit.edu	37	13	84453480	84453480	+	3'UTR	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMOC2	64094	broad.mit.edu	37	6	168999393	168999393	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMO	6608	broad.mit.edu	37	7	128848686	128848686	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMPD3	55512	broad.mit.edu	37	16	68397359	68397359	+	Intron	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD116-4	100033416	broad.mit.edu	37	15	25318419	25318419	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNTG1	54212	broad.mit.edu	37	8	51449349	51449349	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNTG1	54212	broad.mit.edu	37	8	51617105	51617105	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNTG1	54212	broad.mit.edu	37	8	51705212	51705212	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX7	51375	broad.mit.edu	37	1	99157099	99157099	+	Silent	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS1	114815	broad.mit.edu	37	10	108337086	108337086	+	3'UTR	SNP	C	A	A	rs144559779	by1000genomes	TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS1	114815	broad.mit.edu	37	10	108466382	108466382	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS1	114815	broad.mit.edu	37	10	108489872	108489872	+	Nonsense_Mutation	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS1	114815	broad.mit.edu	37	10	108536260	108536260	+	Intron	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS3	22986	broad.mit.edu	37	10	106974110	106974110	+	Intron	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOX7	83595	broad.mit.edu	37	8	10584169	10584169	+	Silent	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG11A	653423	broad.mit.edu	37	8	7717882	7717882	+	Intron	SNP	C	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPANXN4	441525	broad.mit.edu	37	X	142113811	142113811	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATA5	166378	broad.mit.edu	37	4	123977508	123977508	+	Intron	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEG	10290	broad.mit.edu	37	2	220331868	220331868	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158584986	158584986	+	Intron	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158590359	158590359	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158592846	158592846	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158595971	158595971	+	Missense_Mutation	SNP	C	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158617448	158617448	+	Silent	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158646146	158646146	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTBN2	6712	broad.mit.edu	37	11	66461658	66461658	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTBN4	57731	broad.mit.edu	37	19	41010047	41010047	+	Intron	DEL	C	-	-	rs843779	by1000genomes	TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRRM2	23524	broad.mit.edu	37	16	2813458	2813458	+	Frame_Shift_Del	DEL	A	-	-			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRRT	51593	broad.mit.edu	37	7	100473278	100473278	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSPO	23145	broad.mit.edu	37	7	149481971	149481971	+	Splice_Site	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSPO	23145	broad.mit.edu	37	7	149492318	149492318	+	Silent	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSX3	10214	broad.mit.edu	37	X	48206543	48206544	+	Intron	DNP	CC	AA	AA			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSX3	10214	broad.mit.edu	37	X	48214185	48214185	+	Intron	DEL	C	-	-			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSX3	10214	broad.mit.edu	37	X	48218104	48218104	+	5'Flank	SNP	G	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST8SIA1	6489	broad.mit.edu	37	12	22354362	22354362	+	3'UTR	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAP2	55620	broad.mit.edu	37	19	4325419	4325419	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STARD3	10948	broad.mit.edu	37	17	37815267	37815268	+	Intron	DNP	AC	TT	TT			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STARD4	134429	broad.mit.edu	37	5	110843034	110843034	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK33	65975	broad.mit.edu	37	11	8474494	8474494	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STT3B	201595	broad.mit.edu	37	3	31617899	31617899	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STX16	8675	broad.mit.edu	37	20	57246429	57246430	+	Intron	INS	-	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUCLA2	8803	broad.mit.edu	37	13	48547323	48547323	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUFU	51684	broad.mit.edu	37	10	104377022	104377022	+	Intron	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUN5	140732	broad.mit.edu	37	20	31577467	31577467	+	Frame_Shift_Del	DEL	C	-	-			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SV2C	22987	broad.mit.edu	37	5	75581080	75581080	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SVEP1	79987	broad.mit.edu	37	9	113168525	113168525	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SVEP1	79987	broad.mit.edu	37	9	113261339	113261339	+	Nonsense_Mutation	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNPR	132204	broad.mit.edu	37	3	63601172	63601172	+	3'UTR	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT10	341359	broad.mit.edu	37	12	33559996	33559996	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYVN1	84447	broad.mit.edu	37	11	64899785	64899785	+	Silent	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF1C	9013	broad.mit.edu	37	16	84215065	84215065	+	Missense_Mutation	SNP	G	A	A	rs138550395		TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAS2R10	50839	broad.mit.edu	37	12	10978949	10978949	+	5'Flank	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAS2R40	259286	broad.mit.edu	37	7	142919937	142919937	+	Missense_Mutation	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX15	6913	broad.mit.edu	37	1	119467342	119467342	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCF23	150921	broad.mit.edu	37	2	27375715	27375715	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCHHL1	126637	broad.mit.edu	37	1	152060431	152060431	+	Intron	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCP11	6954	broad.mit.edu	37	6	35088592	35088592	+	Intron	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDRD5	163589	broad.mit.edu	37	1	179558031	179558031	+	5'Flank	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEAD3	7005	broad.mit.edu	37	6	35443642	35443642	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEX15	56154	broad.mit.edu	37	8	30701975	30701975	+	Frame_Shift_Del	DEL	T	-	-			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFDP3	51270	broad.mit.edu	37	X	132351100	132351100	+	Silent	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGFBR3	7049	broad.mit.edu	37	1	92195261	92195261	+	Intron	SNP	G	A	A	rs114504921	by1000genomes	TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGM1	7051	broad.mit.edu	37	14	24727494	24727494	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGM6	343641	broad.mit.edu	37	20	2411780	2411780	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THADA	63892	broad.mit.edu	37	2	43735952	43735952	+	Intron	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THBS2	7058	broad.mit.edu	37	6	169648423	169648423	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THSD7A	221981	broad.mit.edu	37	7	11441426	11441426	+	Silent	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THSD7B	80731	broad.mit.edu	37	2	137872775	137872775	+	Silent	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THUMPD2	80745	broad.mit.edu	37	2	39982476	39982476	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIAL1	7073	broad.mit.edu	37	10	121342174	121342174	+	Intron	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIAM1	7074	broad.mit.edu	37	21	32639370	32639370	+	Intron	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLL2	7093	broad.mit.edu	37	10	98156848	98156848	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLR4	7099	broad.mit.edu	37	9	120471072	120471072	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLR4	7099	broad.mit.edu	37	9	120475965	120475965	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TM2D1	83941	broad.mit.edu	37	1	62175007	62175007	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TM7SF4	81501	broad.mit.edu	37	8	105360857	105360858	+	Missense_Mutation	DNP	GG	AT	AT			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEFF1	8577	broad.mit.edu	37	9	103261150	103261150	+	Silent	SNP	A	G	G	rs150250818		TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM146	257062	broad.mit.edu	37	19	5733834	5733834	+	Intron	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM156	80008	broad.mit.edu	37	4	38995327	38995327	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM202	338949	broad.mit.edu	37	15	72699376	72699376	+	Intron	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM59L	25789	broad.mit.edu	37	19	18729130	18729130	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS11B	132724	broad.mit.edu	37	4	69097124	69097124	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS15	5651	broad.mit.edu	37	21	19775907	19775907	+	Missense_Mutation	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS4	56649	broad.mit.edu	37	11	117985987	117985987	+	Missense_Mutation	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNFAIP6	7130	broad.mit.edu	37	2	152226392	152226392	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNFRSF13B	23495	broad.mit.edu	37	17	16875341	16875341	+	Nonsense_Mutation	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNFRSF1A	7132	broad.mit.edu	37	12	6439583	6439583	+	Intron	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNFRSF1A	7132	broad.mit.edu	37	12	6440156	6440156	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNKS1BP1	85456	broad.mit.edu	37	11	57070017	57070017	+	Silent	SNP	G	A	A	rs138321958		TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNR	7143	broad.mit.edu	37	1	175372466	175372466	+	Silent	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNXB	7148	broad.mit.edu	37	6	32011940	32011940	+	Intron	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOM1L2	146691	broad.mit.edu	37	17	17772603	17772603	+	Intron	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOR1AIP2	163590	broad.mit.edu	37	1	179820017	179820017	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP53	7157	broad.mit.edu	37	17	7578455	7578455	+	Missense_Mutation	SNP	C	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPK1	27010	broad.mit.edu	37	7	144344683	144344683	+	Intron	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPM2	7169	broad.mit.edu	37	9	35689925	35689925	+	5'UTR	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPR	7175	broad.mit.edu	37	1	186315207	186315207	+	Intron	SNP	G	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPSAB1	7177	broad.mit.edu	37	16	1292330	1292330	+	3'UTR	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRANK1	9881	broad.mit.edu	37	3	36871225	36871225	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIB2	28951	broad.mit.edu	37	2	12858618	12858618	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM28	10155	broad.mit.edu	37	19	59059178	59059178	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIO	7204	broad.mit.edu	37	5	14462918	14462918	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPC1	7220	broad.mit.edu	37	3	142510007	142510007	+	Intron	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPC6	7225	broad.mit.edu	37	11	101342795	101342795	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPC7	57113	broad.mit.edu	37	5	135692748	135692748	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM1	4308	broad.mit.edu	37	15	31330099	31330099	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM1	4308	broad.mit.edu	37	15	31354658	31354658	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPS1	7227	broad.mit.edu	37	8	116426738	116426738	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSGA10	80705	broad.mit.edu	37	2	99718972	99718972	+	Intron	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSN	7247	broad.mit.edu	37	2	122519158	122519158	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSPAN11	441631	broad.mit.edu	37	12	31135488	31135488	+	Missense_Mutation	SNP	A	T	T	rs148719778	by1000genomes	TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC13	79573	broad.mit.edu	37	1	231114778	231114778	+	5'Flank	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTLL7	79739	broad.mit.edu	37	1	84417625	84417625	+	Silent	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179434299	179434300	+	Missense_Mutation	DNP	TA	AT	AT			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179530103	179530103	+	Splice_Site	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179546340	179546341	+	Intron	DNP	GG	TT	TT			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179567367	179567367	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179593801	179593801	+	Missense_Mutation	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179597015	179597015	+	Frame_Shift_Del	DEL	T	-	-			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179665049	179665049	+	Intron	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUFM	7284	broad.mit.edu	37	16	28856035	28856035	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TULP1	7287	broad.mit.edu	37	6	35478796	35478796	+	Intron	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TXNDC3	51314	broad.mit.edu	37	7	37927904	37927904	+	Missense_Mutation	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE2MP1	606551	broad.mit.edu	37	16	34404234	34404234	+	RNA	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE2M	9040	broad.mit.edu	37	19	59067459	59067459	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE4B	10277	broad.mit.edu	37	1	10207112	10207112	+	Missense_Mutation	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR4	23352	broad.mit.edu	37	1	19486549	19486549	+	Intron	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBXN2B	137886	broad.mit.edu	37	8	59347001	59347001	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGDH	7358	broad.mit.edu	37	4	39512309	39512309	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT1A5	54579	broad.mit.edu	37	2	234656719	234656719	+	Intron	SNP	A	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B4	7363	broad.mit.edu	37	4	70361447	70361447	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B4	7363	broad.mit.edu	37	4	70361573	70361573	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT3A1	133688	broad.mit.edu	37	5	35965971	35965971	+	Missense_Mutation	SNP	T	A	A	rs144943338		TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT3A2	167127	broad.mit.edu	37	5	36035765	36035765	+	3'UTR	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT8	7368	broad.mit.edu	37	4	115544547	115544547	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UMOD	7369	broad.mit.edu	37	16	20352615	20352615	+	Missense_Mutation	SNP	G	A	A	rs139607138	byFrequency	TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC13A	23025	broad.mit.edu	37	19	17763418	17763418	+	Intron	SNP	C	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UQCRB	7381	broad.mit.edu	37	8	97243177	97243177	+	3'UTR	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	215953152	215953152	+	Intron	SNP	C	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216496780	216496780	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP33	23032	broad.mit.edu	37	1	78167023	78167023	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP33	23032	broad.mit.edu	37	1	78189129	78189129	+	Splice_Site	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP36	57602	broad.mit.edu	37	17	76794540	76794540	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTRN	7402	broad.mit.edu	37	6	144803498	144803498	+	Missense_Mutation	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	38536883	38536883	+	IGR	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	38978037	38978037	+	IGR	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	52439392	52439392	+	IGR	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	86320301	86320301	+	IGR	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	101079854	101079854	+	IGR	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	27912494	27912494	+	IGR	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	44561461	44561461	+	IGR	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49088611	49088611	+	IGR	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55212543	55212543	+	IGR	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	59056106	59056106	+	IGR	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	88142417	88142417	+	IGR	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	89502119	89502119	+	IGR	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	90015888	90015888	+	IGR	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	106565185	106565185	+	IGR	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	126994993	126994993	+	IGR	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	63397531	63397531	+	IGR	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	6589339	6589339	+	IGR	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	7759883	7759883	+	IGR	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	88177733	88177733	+	IGR	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	94914960	94914960	+	IGR	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	19960309	19960309	+	IGR	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	23411213	23411213	+	IGR	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	59104882	59104882	+	IGR	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	65532890	65532890	+	IGR	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	19476190	19476190	+	IGR	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	19806495	19806495	+	IGR	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20147712	20147712	+	IGR	DEL	C	-	-			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	39197329	39197329	+	IGR	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	43769666	43769666	+	IGR	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	70712068	70712068	+	IGR	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	82384145	82384146	+	IGR	DNP	CA	AG	AG	rs112152762		TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	101093819	101093819	+	IGR	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	84722160	84722160	+	IGR	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	90835040	90835040	+	IGR	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	20604053	20604053	+	IGR	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32168958	32168958	+	IGR	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32182353	32182353	+	IGR	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32369565	32369565	+	IGR	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32490287	32490287	+	IGR	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32616830	32616830	+	IGR	SNP	C	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32617070	32617070	+	IGR	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32618971	32618971	+	IGR	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32626665	32626665	+	IGR	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33366633	33366633	+	IGR	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33371759	33371759	+	IGR	SNP	A	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33372857	33372857	+	IGR	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33379942	33379942	+	IGR	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33401989	33401989	+	IGR	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33410735	33410735	+	IGR	SNP	T	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	52689802	52689802	+	IGR	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	62814287	62814287	+	IGR	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	34240577	34240577	+	IGR	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	60216079	60216079	+	IGR	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	14201088	14201088	+	IGR	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	57864248	57864248	+	IGR	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	14199148	14199148	+	IGR	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	15687458	15687458	+	IGR	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	22498533	22498533	+	IGR	SNP	G	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	22551623	22551623	+	IGR	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	23688857	23688857	+	IGR	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	36448235	36448235	+	IGR	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	55063463	55063463	+	IGR	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	57689244	57689245	+	IGR	INS	-	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	101117690	101117690	+	IGR	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	106240837	106240837	+	IGR	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	12281168	12281168	+	IGR	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	146519637	146519637	+	IGR	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	152586662	152586662	+	IGR	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	157606071	157606071	+	IGR	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	164326462	164326462	+	IGR	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	191115599	191115599	+	IGR	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	220489013	220489013	+	IGR	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	62120210	62120210	+	IGR	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	80916909	80916909	+	IGR	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	89755958	89755959	+	IGR	DNP	CA	AG	AG			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	53968445	53968445	+	IGR	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	14721557	14721557	+	IGR	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	14916908	14916908	+	IGR	SNP	C	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	20230531	20230531	+	IGR	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	20617824	20617824	+	IGR	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	16413988	16413988	+	IGR	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	16415440	16415440	+	IGR	SNP	C	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	27283543	27283543	+	IGR	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	104110806	104110806	+	IGR	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	128007125	128007125	+	IGR	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	130987096	130987096	+	IGR	SNP	C	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	132381478	132381478	+	IGR	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	132384792	132384792	+	IGR	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	154277293	154277294	+	IGR	DNP	CT	TA	TA			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	162436685	162436685	+	IGR	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	175174927	175174927	+	IGR	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	175366643	175366643	+	IGR	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	187866826	187866826	+	IGR	SNP	C	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	187866890	187866890	+	IGR	SNP	G	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	195052672	195052672	+	IGR	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	62788358	62788358	+	IGR	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	67241307	67241307	+	IGR	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	88664853	88664853	+	IGR	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91795507	91795507	+	IGR	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91800730	91800730	+	IGR	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91927013	91927013	+	IGR	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	148703800	148703800	+	IGR	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	178211303	178211303	+	IGR	SNP	A	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	189625184	189625184	+	IGR	SNP	G	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	36810105	36810105	+	IGR	SNP	T	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	88998382	88998382	+	IGR	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	90306519	90306519	+	IGR	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	96068637	96068637	+	IGR	SNP	C	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	11374196	11374196	+	IGR	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	135968042	135968042	+	IGR	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	139544944	139544944	+	IGR	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	156306705	156306705	+	IGR	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	165577525	165577525	+	IGR	DEL	C	-	-			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	190395536	190395536	+	IGR	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	4159072	4159072	+	IGR	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	69574449	69574449	+	IGR	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	69992111	69992111	+	IGR	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	69992176	69992176	+	IGR	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	8176237	8176237	+	IGR	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	127121502	127121502	+	IGR	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	144609200	144609200	+	IGR	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	180099208	180099209	+	IGR	INS	-	C	C	rs139418796	by1000genomes	TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	18049776	18049776	+	IGR	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	32522950	32522950	+	IGR	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	32522969	32522969	+	IGR	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	40067089	40067089	+	IGR	SNP	G	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	5376414	5376414	+	IGR	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	7296390	7296390	+	IGR	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	75207673	75207673	+	IGR	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	29231483	29231483	+	IGR	SNP	C	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	29385600	29385600	+	IGR	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	46173837	46173837	+	IGR	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	49045298	49045298	+	IGR	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	86137226	86137226	+	IGR	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	139188403	139188403	+	IGR	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	152143708	152143708	+	IGR	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	53930570	53930570	+	IGR	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	55001288	55001288	+	IGR	SNP	C	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	57216925	57216925	+	IGR	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	57217055	57217055	+	IGR	SNP	T	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	62916289	62916289	+	IGR	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63574560	63574560	+	IGR	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63575089	63575089	+	IGR	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	92098120	92098120	+	IGR	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	9766847	9766847	+	IGR	SNP	C	A	A	rs146884160	by1000genomes	TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	111568649	111568649	+	IGR	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	29885310	29885310	+	IGR	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	48012804	48012804	+	IGR	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	56962928	56962928	+	IGR	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	61852466	61852466	+	IGR	SNP	G	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	81263408	81263408	+	IGR	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	85861246	85861246	+	IGR	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	94659197	94659197	+	IGR	SNP	G	T	T	rs147003996	by1000genomes	TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	14922258	14922258	+	IGR	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	30689320	30689320	+	IGR	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	32333996	32333996	+	IGR	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	6279156	6279156	+	IGR	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	76089510	76089510	+	IGR	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	80765429	80765429	+	IGR	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	84701438	84701438	+	IGR	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	84702340	84702340	+	IGR	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	99674095	99674095	+	IGR	SNP	C	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	120003636	120003636	+	IGR	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	123460153	123460153	+	IGR	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	155058860	155058860	+	IGR	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	23094824	23094824	+	IGR	SNP	C	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	26178895	26178895	+	IGR	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	48025116	48025117	+	IGR	DNP	GG	TT	TT			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	48140442	48140442	+	IGR	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	55315152	55315152	+	IGR	SNP	G	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	63918260	63918260	+	IGR	DEL	G	-	-			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	79815995	79815995	+	IGR	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	79816291	79816291	+	IGR	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	79827677	79827677	+	IGR	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	Y	7580996	7580996	+	IGR	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	Y	9860318	9860318	+	IGR	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VDAC1	7416	broad.mit.edu	37	5	133308655	133308655	+	Intron	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VIT	5212	broad.mit.edu	37	2	36982036	36982036	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13B	157680	broad.mit.edu	37	8	100245446	100245446	+	Intron	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13B	157680	broad.mit.edu	37	8	100835929	100835929	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS16	64601	broad.mit.edu	37	20	2844701	2844701	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS39	23339	broad.mit.edu	37	15	42454056	42454056	+	Intron	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VSIG4	11326	broad.mit.edu	37	X	65253306	65253306	+	Intron	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VSTM1	284415	broad.mit.edu	37	19	54544207	54544207	+	3'UTR	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VWA3B	200403	broad.mit.edu	37	2	98844751	98844751	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WBP11P1	441818	broad.mit.edu	37	18	30093391	30093391	+	RNA	SNP	C	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WBSCR17	64409	broad.mit.edu	37	7	71175943	71175943	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDFY3	23001	broad.mit.edu	37	4	85701173	85701173	+	Intron	SNP	C	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR41	55255	broad.mit.edu	37	5	76759072	76759072	+	Intron	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR52	55779	broad.mit.edu	37	3	113092245	113092245	+	Intron	SNP	A	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WLS	79971	broad.mit.edu	37	1	68628101	68628101	+	Intron	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XDH	7498	broad.mit.edu	37	2	31571266	31571266	+	Intron	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIRP2	129446	broad.mit.edu	37	2	168104362	168104362	+	Missense_Mutation	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XKR6	286046	broad.mit.edu	37	8	10756197	10756197	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPNPEP1	7511	broad.mit.edu	37	10	111633124	111633124	+	Splice_Site	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XRCC5	7520	broad.mit.edu	37	2	216995762	216995762	+	Intron	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YIPF7	285525	broad.mit.edu	37	4	44638050	44638050	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YME1L1	10730	broad.mit.edu	37	10	27412646	27412646	+	Intron	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZAN	7455	broad.mit.edu	37	7	100369426	100369426	+	Intron	SNP	C	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZAN	7455	broad.mit.edu	37	7	100374023	100374023	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZAP70	7535	broad.mit.edu	37	2	98354099	98354099	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBBX	79740	broad.mit.edu	37	3	167045743	167045743	+	Missense_Mutation	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB11	27107	broad.mit.edu	37	3	101390764	101390764	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB39	9880	broad.mit.edu	37	12	57396914	57396914	+	Silent	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB45	84878	broad.mit.edu	37	19	59027778	59027778	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3H12B	340554	broad.mit.edu	37	X	64719040	64719040	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3H3	23144	broad.mit.edu	37	8	144522481	144522481	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3HAV1	56829	broad.mit.edu	37	7	138749476	138749476	+	Intron	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZCCHC11	23318	broad.mit.edu	37	1	52947418	52947418	+	Intron	SNP	C	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZDHHC19	131540	broad.mit.edu	37	3	195936393	195936393	+	Intron	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZDHHC19	131540	broad.mit.edu	37	3	195937443	195937443	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZEB1	6935	broad.mit.edu	37	10	31809572	31809572	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX4	79776	broad.mit.edu	37	8	77764453	77764453	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX4	79776	broad.mit.edu	37	8	77768373	77768373	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX4	79776	broad.mit.edu	37	8	77776592	77776592	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX4	79776	broad.mit.edu	37	8	77776730	77776730	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFP161	7541	broad.mit.edu	37	18	5290937	5290937	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFP57	346171	broad.mit.edu	37	6	29643085	29643085	+	Intron	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFP64	55734	broad.mit.edu	37	20	50781293	50781293	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFPM2	23414	broad.mit.edu	37	8	106813908	106813908	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFYVE1	53349	broad.mit.edu	37	14	73440837	73440837	+	Silent	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFYVE27	118813	broad.mit.edu	37	10	99504558	99504558	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZIC4	84107	broad.mit.edu	37	3	147120537	147120537	+	Nonsense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMAT1	84460	broad.mit.edu	37	X	101139127	101139127	+	Silent	SNP	T	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMAT4	79698	broad.mit.edu	37	8	40532226	40532226	+	Nonsense_Mutation	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMPSTE24	10269	broad.mit.edu	37	1	40758147	40758147	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF121	7675	broad.mit.edu	37	19	9677032	9677032	+	Nonsense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF205	7755	broad.mit.edu	37	16	3169032	3169032	+	Intron	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF211	10520	broad.mit.edu	37	19	58145268	58145268	+	Intron	SNP	G	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF229	7772	broad.mit.edu	37	19	44933335	44933335	+	Nonsense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF300	91975	broad.mit.edu	37	5	150276158	150276158	+	Missense_Mutation	SNP	T	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF304	57343	broad.mit.edu	37	19	57867648	57867648	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF318	24149	broad.mit.edu	37	6	43306991	43306991	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF33A	7581	broad.mit.edu	37	10	38305840	38305840	+	Silent	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF366	167465	broad.mit.edu	37	5	71757220	71757220	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF385D	79750	broad.mit.edu	37	3	21706377	21706377	+	Splice_Site	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF416	55659	broad.mit.edu	37	19	58089425	58089425	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF423	23090	broad.mit.edu	37	16	49670063	49670063	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF490	57474	broad.mit.edu	37	19	12691647	12691647	+	Silent	SNP	G	C	C	rs76668661	byFrequency;by1000genomes	TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF514	84874	broad.mit.edu	37	2	95815661	95815661	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF547	284306	broad.mit.edu	37	19	57888789	57888789	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF622	90441	broad.mit.edu	37	5	16465129	16465129	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF691	51058	broad.mit.edu	37	1	43316702	43316702	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF69	7620	broad.mit.edu	37	19	12016828	12016828	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF716	441234	broad.mit.edu	37	7	57510109	57510109	+	Intron	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF738	148203	broad.mit.edu	37	19	21566575	21566575	+	3'UTR	SNP	T	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF804B	219578	broad.mit.edu	37	7	88966205	88966205	+	Silent	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF81	347344	broad.mit.edu	37	X	47775135	47775135	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF829	374899	broad.mit.edu	37	19	37382996	37382996	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	45551302	45551302	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22948636	22948636	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	23606389	23606389	+	5'Flank	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	75595021	75595021	+	Silent	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	76074812	76074812	+	Intron	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	21730961	21730961	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	17385481	17385481	+	5'Flank	SNP	C	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	132294407	132294407	+	Intron	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89265778	89265778	+	RNA	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89266063	89266063	+	RNA	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89278372	89278372	+	Intron	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89292416	89292416	+	Intron	SNP	C	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89416835	89416835	+	RNA	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89544279	89544279	+	RNA	SNP	T	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90228994	90228994	+	Intron	SNP	C	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90229563	90229563	+	Intron	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	69343358	69343358	+	Intron	SNP	A	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	28927302	28927302	+	RNA	SNP	G	C	C			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142247509	142247509	+	Intron	SNP	G	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	57389706	57389706	+	Intron	SNP	C	T	T			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	43839952	43839952	+	Intron	SNP	A	G	G			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	66517908	66517908	+	Intron	DEL	C	-	-			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
psiTPTE22	387590	broad.mit.edu	37	22	17178852	17178852	+	RNA	SNP	T	A	A			TCGA-38-4632-01A-01D-1753-08	TCGA-38-4632-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
