Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
A2BP1	54715	broad.mit.edu	37	16	7382936	7382936	+	Intron	SNP	A	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
A2ML1	144568	broad.mit.edu	37	12	9004757	9004757	+	Intron	DEL	G	-	-			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AADAC	13	broad.mit.edu	37	3	151542581	151542581	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AARS2	57505	broad.mit.edu	37	6	44268086	44268086	+	3'UTR	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AARSD1	80755	broad.mit.edu	37	17	41105677	41105677	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA10	10349	broad.mit.edu	37	17	67181702	67181702	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA12	26154	broad.mit.edu	37	2	215866256	215866256	+	Intron	SNP	T	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA12	26154	broad.mit.edu	37	2	215880350	215880350	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA13	154664	broad.mit.edu	37	7	48316041	48316041	+	Missense_Mutation	SNP	A	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA7	10347	broad.mit.edu	37	19	1061838	1061838	+	Missense_Mutation	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA9	10350	broad.mit.edu	37	17	67028185	67028185	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB5	340273	broad.mit.edu	37	7	20685634	20685634	+	5'Flank	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC2	1244	broad.mit.edu	37	10	101606846	101606846	+	Silent	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC4	10257	broad.mit.edu	37	13	95861826	95861826	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC9	10060	broad.mit.edu	37	12	22078928	22078928	+	Silent	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCF2	10061	broad.mit.edu	37	7	150912627	150912627	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCG2	9429	broad.mit.edu	37	4	89043006	89043006	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABHD12B	145447	broad.mit.edu	37	14	51370657	51370657	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABHD15	116236	broad.mit.edu	37	17	27893424	27893424	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABHD3	171586	broad.mit.edu	37	18	19231745	19231745	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABI3BP	25890	broad.mit.edu	37	3	100569548	100569548	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABR	29	broad.mit.edu	37	17	915336	915336	+	Intron	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACACB	32	broad.mit.edu	37	12	109697788	109697788	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACAN	176	broad.mit.edu	37	15	89391305	89391305	+	Intron	DEL	G	-	-			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACAP1	9744	broad.mit.edu	37	17	7253566	7253567	+	Intron	DNP	CC	AT	AT			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACHE	43	broad.mit.edu	37	7	100488527	100488527	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACIN1	22985	broad.mit.edu	37	14	23538845	23538845	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACOT7	11332	broad.mit.edu	37	1	6354914	6354914	+	Intron	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM2A	123876	broad.mit.edu	37	16	20497976	20497976	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTA1	58	broad.mit.edu	37	1	229567954	229567954	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTL6A	86	broad.mit.edu	37	3	179287864	179287864	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTN2	88	broad.mit.edu	37	1	236891068	236891068	+	Intron	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACVR2A	92	broad.mit.edu	37	2	148683668	148683668	+	Nonsense_Mutation	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAD1	132612	broad.mit.edu	37	4	123332560	123332560	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM18	8749	broad.mit.edu	37	8	39535050	39535050	+	Silent	SNP	A	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM21P1	145241	broad.mit.edu	37	14	70713003	70713003	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106232157	106232157	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106692219	106692219	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106848871	106848871	+	RNA	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106866534	106866534	+	RNA	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106899461	106899461	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106916915	106916915	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS10	81794	broad.mit.edu	37	19	8654284	8654284	+	Intron	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS12	81792	broad.mit.edu	37	5	33588546	33588546	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS12	81792	broad.mit.edu	37	5	33616054	33616054	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS16	170690	broad.mit.edu	37	5	5146295	5146295	+	Silent	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS20	80070	broad.mit.edu	37	12	43826370	43826370	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS3	9508	broad.mit.edu	37	4	73414200	73414200	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS4	9507	broad.mit.edu	37	1	161161117	161161117	+	Silent	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS4	9507	broad.mit.edu	37	1	161165959	161165959	+	Splice_Site	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS5	11096	broad.mit.edu	37	21	28306779	28306779	+	Intron	SNP	A	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS6	11174	broad.mit.edu	37	5	64492849	64492849	+	Missense_Mutation	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS7	11173	broad.mit.edu	37	15	79057034	79057034	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS9	56999	broad.mit.edu	37	3	64606734	64606734	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTSL1	92949	broad.mit.edu	37	9	18639381	18639381	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTSL3	57188	broad.mit.edu	37	15	84566611	84566611	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADARB2	105	broad.mit.edu	37	10	1313244	1313244	+	Silent	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY1	107	broad.mit.edu	37	7	45662261	45662261	+	Silent	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY1	107	broad.mit.edu	37	7	45726179	45726179	+	Silent	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY2	108	broad.mit.edu	37	5	7626390	7626390	+	Silent	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY2	108	broad.mit.edu	37	5	7784630	7784630	+	Intron	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY8	114	broad.mit.edu	37	8	131896902	131896902	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADNP	23394	broad.mit.edu	37	20	49530773	49530773	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADRBK2	157	broad.mit.edu	37	22	26074883	26074883	+	Splice_Site	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFAP1	60312	broad.mit.edu	37	4	7795473	7795473	+	Silent	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFF2	2334	broad.mit.edu	37	X	148048661	148048661	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFF2	2334	broad.mit.edu	37	X	148054888	148054888	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGAP2	116986	broad.mit.edu	37	12	58121759	58121759	+	Silent	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGXT2L1	64850	broad.mit.edu	37	4	109663949	109663949	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AIM2	9447	broad.mit.edu	37	1	159035799	159035799	+	Silent	SNP	C	A	A	rs142558736		TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AIM2	9447	broad.mit.edu	37	1	159035909	159035909	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AIM2	9447	broad.mit.edu	37	1	159038199	159038199	+	Intron	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AIM2	9447	broad.mit.edu	37	1	159038509	159038509	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AIRE	326	broad.mit.edu	37	21	45709652	45709652	+	Silent	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AK3	50808	broad.mit.edu	37	9	4719353	4719353	+	Intron	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKAP4	8852	broad.mit.edu	37	X	49958170	49958170	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKR1B10	57016	broad.mit.edu	37	7	134222224	134222224	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKR1C4	1109	broad.mit.edu	37	10	5242098	5242098	+	Intron	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKR1D1	6718	broad.mit.edu	37	7	137782616	137782616	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKR1E2	83592	broad.mit.edu	37	10	4879695	4879695	+	Silent	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALG10	84920	broad.mit.edu	37	12	34175689	34175689	+	Missense_Mutation	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALG10	84920	broad.mit.edu	37	12	34177036	34177036	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALG8	79053	broad.mit.edu	37	11	77825338	77825338	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALKBH3	221120	broad.mit.edu	37	11	43908276	43908276	+	Intron	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALKBH3	221120	broad.mit.edu	37	11	43940650	43940650	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALKBH4	54784	broad.mit.edu	37	7	102097954	102097954	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALLC	55821	broad.mit.edu	37	2	3718823	3718823	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALLC	55821	broad.mit.edu	37	2	3729201	3729201	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALOX12	239	broad.mit.edu	37	17	6902727	6902727	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALOX15	246	broad.mit.edu	37	17	4536632	4536632	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALPK2	115701	broad.mit.edu	37	18	56184357	56184357	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALPK2	115701	broad.mit.edu	37	18	56246001	56246001	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMOT	154796	broad.mit.edu	37	X	112024186	112024186	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANAPC1	64682	broad.mit.edu	37	2	112542754	112542754	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANGEL1	23357	broad.mit.edu	37	14	77270204	77270204	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK1	286	broad.mit.edu	37	8	41525854	41525854	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK1	286	broad.mit.edu	37	8	41548014	41548014	+	Missense_Mutation	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK2	287	broad.mit.edu	37	4	114257011	114257011	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK2	287	broad.mit.edu	37	4	114276714	114276714	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKIB1	54467	broad.mit.edu	37	7	91948852	91948852	+	Intron	SNP	A	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD17	26057	broad.mit.edu	37	4	73979401	73979401	+	Intron	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD27	84079	broad.mit.edu	37	19	33093033	33093033	+	Splice_Site	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD30A	91074	broad.mit.edu	37	10	37438728	37438728	+	Silent	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD30A	91074	broad.mit.edu	37	10	37442598	37442598	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD30A	91074	broad.mit.edu	37	10	37508127	37508127	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD30B	374860	broad.mit.edu	37	18	14757826	14757826	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD57	65124	broad.mit.edu	37	2	110373178	110373178	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD5	63926	broad.mit.edu	37	20	10033777	10033778	+	Frame_Shift_Ins	INS	-	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO4	121601	broad.mit.edu	37	12	101462380	101462380	+	Intron	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO5	203859	broad.mit.edu	37	11	22272361	22272361	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO5	203859	broad.mit.edu	37	11	22279207	22279207	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO6	196527	broad.mit.edu	37	12	45742320	45742320	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO6	196527	broad.mit.edu	37	12	45761615	45761615	+	Intron	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO8	57719	broad.mit.edu	37	19	17444344	17444344	+	Silent	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANXA11	311	broad.mit.edu	37	10	81923853	81923853	+	Missense_Mutation	SNP	C	A	A	rs140133265		TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AOAH	313	broad.mit.edu	37	7	36661407	36661407	+	Intron	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP1M1	8907	broad.mit.edu	37	19	16345295	16345295	+	3'UTR	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APCS	325	broad.mit.edu	37	1	159558031	159558031	+	Missense_Mutation	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOB	338	broad.mit.edu	37	2	21235092	21235092	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOL4	80832	broad.mit.edu	37	22	36591550	36591551	+	Intron	INS	-	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APP	351	broad.mit.edu	37	21	27462312	27462312	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AQP3	360	broad.mit.edu	37	9	33442495	33442495	+	Missense_Mutation	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARF4	378	broad.mit.edu	37	3	57570220	57570220	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP25	9938	broad.mit.edu	37	2	69034414	69034414	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP32	9743	broad.mit.edu	37	11	128838969	128838970	+	Missense_Mutation	DNP	GC	AA	AA	rs117353412	byFrequency	TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP36	158763	broad.mit.edu	37	X	130222674	130222674	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF11	9826	broad.mit.edu	37	1	156914257	156914257	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF12	23365	broad.mit.edu	37	11	120348157	120348157	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF1	9138	broad.mit.edu	37	19	42396277	42396277	+	Intron	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF3	50650	broad.mit.edu	37	3	56771095	56771095	+	Intron	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF4	50649	broad.mit.edu	37	2	131704285	131704285	+	Intron	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARID3A	1820	broad.mit.edu	37	19	964827	964827	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARMC1	55156	broad.mit.edu	37	8	66517445	66517445	+	Intron	SNP	A	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ART5	116969	broad.mit.edu	37	11	3661637	3661637	+	Intron	SNP	A	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASB18	401036	broad.mit.edu	37	2	237123093	237123093	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASB2	51676	broad.mit.edu	37	14	94420888	94420888	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASB7	140460	broad.mit.edu	37	15	101170046	101170046	+	Missense_Mutation	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASCC2	84164	broad.mit.edu	37	22	30202159	30202159	+	Intron	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN1	460	broad.mit.edu	37	1	176926736	176926736	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN1	460	broad.mit.edu	37	1	177002012	177002012	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN2	23245	broad.mit.edu	37	9	119943389	119943389	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN2	23245	broad.mit.edu	37	9	120176788	120176788	+	Silent	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASZ1	136991	broad.mit.edu	37	7	117067580	117067580	+	5'Flank	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATHL1	80162	broad.mit.edu	37	11	294531	294531	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATL1	51062	broad.mit.edu	37	14	51099082	51099082	+	3'UTR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP10B	23120	broad.mit.edu	37	5	160029653	160029653	+	Silent	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP10B	23120	broad.mit.edu	37	5	160059375	160059375	+	Splice_Site	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP10D	57205	broad.mit.edu	37	4	47493055	47493055	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP12A	479	broad.mit.edu	37	13	25264402	25264402	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP13A4	84239	broad.mit.edu	37	3	193156789	193156789	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP13A4	84239	broad.mit.edu	37	3	193183721	193183721	+	Intron	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1A4	480	broad.mit.edu	37	1	160129081	160129081	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1A4	480	broad.mit.edu	37	1	160156347	160156347	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2B3	492	broad.mit.edu	37	X	152815041	152815042	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP5A1	498	broad.mit.edu	37	18	43664302	43664302	+	Silent	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6AP1L	92270	broad.mit.edu	37	5	81606107	81606107	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6AP1	537	broad.mit.edu	37	X	153664270	153664270	+	3'UTR	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6V0A4	50617	broad.mit.edu	37	7	138413315	138413315	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6V1C1	528	broad.mit.edu	37	8	104065051	104065051	+	Splice_Site	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP8A2	51761	broad.mit.edu	37	13	26151107	26151107	+	Intron	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP8A2	51761	broad.mit.edu	37	13	26402171	26402171	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP8A2	51761	broad.mit.edu	37	13	26411231	26411231	+	Intron	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP8B1	5205	broad.mit.edu	37	18	55365077	55365077	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP8B3	148229	broad.mit.edu	37	19	1796077	1796077	+	Silent	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATRX	546	broad.mit.edu	37	X	76931695	76931695	+	Intron	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AXIN1	8312	broad.mit.edu	37	16	347698	347698	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AZU1	566	broad.mit.edu	37	19	829516	829516	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
B4GALNT2	124872	broad.mit.edu	37	17	47236504	47236504	+	Silent	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
B4GALNT4	338707	broad.mit.edu	37	11	381797	381797	+	3'UTR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
B4GALT6	9331	broad.mit.edu	37	18	29205774	29205774	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BACH2	60468	broad.mit.edu	37	6	90660326	90660326	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAGE2	85319	broad.mit.edu	37	21	11047590	11047590	+	3'UTR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAI1	575	broad.mit.edu	37	8	143570778	143570778	+	Silent	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAI2	576	broad.mit.edu	37	1	32194077	32194077	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAI3	577	broad.mit.edu	37	6	70065638	70065638	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAT2L1	84726	broad.mit.edu	37	9	134354682	134354682	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAZ1A	11177	broad.mit.edu	37	14	35243654	35243654	+	Missense_Mutation	SNP	C	G	G	rs146795126		TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAZ1B	9031	broad.mit.edu	37	7	72877186	72877186	+	Intron	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCL11A	53335	broad.mit.edu	37	2	60689032	60689032	+	Missense_Mutation	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCLAF1	9774	broad.mit.edu	37	6	136596682	136596682	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCLAF1	9774	broad.mit.edu	37	6	136600953	136600953	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCR	613	broad.mit.edu	37	22	23606096	23606096	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCR	613	broad.mit.edu	37	22	23615088	23615088	+	Intron	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BGN	633	broad.mit.edu	37	X	152771607	152771607	+	Intron	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BIRC6	57448	broad.mit.edu	37	2	32602748	32602748	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMP3	651	broad.mit.edu	37	4	81974563	81974563	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMX	660	broad.mit.edu	37	X	15509128	15509128	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BNC2	54796	broad.mit.edu	37	9	16582912	16582913	+	Intron	INS	-	AA	AA			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BOC	91653	broad.mit.edu	37	3	113002510	113002510	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BPIL1	80341	broad.mit.edu	37	20	31601492	31601492	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BPIL2	254240	broad.mit.edu	37	22	32810311	32810311	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BPNT1	10380	broad.mit.edu	37	1	220246039	220246039	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRAF	673	broad.mit.edu	37	7	140534575	140534575	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRD3	8019	broad.mit.edu	37	9	136916669	136916669	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRD4	23476	broad.mit.edu	37	19	15378421	15378421	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTD	686	broad.mit.edu	37	3	15677002	15677002	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTN3A3	10384	broad.mit.edu	37	6	26448919	26448919	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTN3A3	10384	broad.mit.edu	37	6	26452326	26452326	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf137	26098	broad.mit.edu	37	10	127414293	127414293	+	Silent	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf18	54906	broad.mit.edu	37	10	5782143	5782143	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf18	54906	broad.mit.edu	37	10	5790825	5790825	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf26	54838	broad.mit.edu	37	10	104557873	104557873	+	Intron	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf41	25758	broad.mit.edu	37	11	33564725	33564725	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf12	196477	broad.mit.edu	37	12	91348265	91348265	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf35	55196	broad.mit.edu	37	12	32137492	32137492	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf45	121053	broad.mit.edu	37	12	105388402	105388402	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf50	160419	broad.mit.edu	37	12	88379804	88379804	+	Nonsense_Mutation	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf71	728858	broad.mit.edu	37	12	27235077	27235077	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf145	145508	broad.mit.edu	37	14	81244364	81244364	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf148	122945	broad.mit.edu	37	14	77880278	77880278	+	Silent	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C16orf58	64755	broad.mit.edu	37	16	31510740	31510740	+	Intron	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C16orf70	80262	broad.mit.edu	37	16	67154014	67154014	+	Splice_Site	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf47	284083	broad.mit.edu	37	17	56621194	56621194	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C19orf47	126526	broad.mit.edu	37	19	40832377	40832377	+	Silent	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C19orf76	199800	broad.mit.edu	37	19	50193051	50193051	+	5'UTR	SNP	T	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1QTNF3	114899	broad.mit.edu	37	5	34020750	34020750	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1QTNF8	390664	broad.mit.edu	37	16	1143871	1143871	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf107	27042	broad.mit.edu	37	1	210012182	210012182	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf157	284573	broad.mit.edu	37	1	204006263	204006263	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf163	65260	broad.mit.edu	37	1	53153409	53153409	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf172	126695	broad.mit.edu	37	1	27278544	27278544	+	Missense_Mutation	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf173	127254	broad.mit.edu	37	1	75086428	75086428	+	Silent	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf189	388701	broad.mit.edu	37	1	154177945	154177945	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf43	25912	broad.mit.edu	37	1	154185163	154185163	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf74	148304	broad.mit.edu	37	1	209956858	209956858	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf132	140699	broad.mit.edu	37	20	35743538	35743538	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf135	140701	broad.mit.edu	37	20	62493477	62493478	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf185	359710	broad.mit.edu	37	20	31647780	31647780	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf26	26074	broad.mit.edu	37	20	20033430	20033430	+	Intron	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C21orf29	54084	broad.mit.edu	37	21	46097579	46097579	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C21orf62	56245	broad.mit.edu	37	21	34166535	34166535	+	Silent	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf39	92749	broad.mit.edu	37	2	26671598	26671598	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf48	348738	broad.mit.edu	37	2	10295279	10295279	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf53	339779	broad.mit.edu	37	2	27361199	27361199	+	5'UTR	SNP	G	A	A	rs143780871		TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf55	343990	broad.mit.edu	37	2	99413735	99413735	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf22	55322	broad.mit.edu	37	5	31541486	31541486	+	Silent	SNP	A	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf28	64417	broad.mit.edu	37	5	43446492	43446492	+	Silent	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf10	10665	broad.mit.edu	37	6	32260988	32260989	+	Frame_Shift_Ins	INS	-	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf115	58527	broad.mit.edu	37	6	139355328	139355328	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf118	168090	broad.mit.edu	37	6	165693636	165693636	+	Intron	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf145	221749	broad.mit.edu	37	6	3754343	3754343	+	5'Flank	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf222	389384	broad.mit.edu	37	6	36294270	36294270	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf33	202865	broad.mit.edu	37	7	148312286	148312286	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf42	55069	broad.mit.edu	37	7	66418141	66418141	+	Intron	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8B	732	broad.mit.edu	37	1	57431535	57431535	+	Silent	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8orf38	137682	broad.mit.edu	37	8	96044361	96044361	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8orf84	157869	broad.mit.edu	37	8	73993286	73993286	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf5	23731	broad.mit.edu	37	9	111870813	111870813	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf79	286234	broad.mit.edu	37	9	90503661	90503661	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf98	158067	broad.mit.edu	37	9	135602757	135602757	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CA10	56934	broad.mit.edu	37	17	49730927	49730927	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CA9	768	broad.mit.edu	37	9	35676078	35676078	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CABIN1	23523	broad.mit.edu	37	22	24455567	24455567	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CABLES2	81928	broad.mit.edu	37	20	60965853	60965853	+	3'UTR	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1A	773	broad.mit.edu	37	19	13363933	13363933	+	Intron	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1C	775	broad.mit.edu	37	12	2613866	2613866	+	Intron	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1C	775	broad.mit.edu	37	12	2786312	2786312	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1D	776	broad.mit.edu	37	3	53535534	53535534	+	Intron	SNP	A	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1G	8913	broad.mit.edu	37	17	48655739	48655739	+	Silent	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1H	8912	broad.mit.edu	37	16	1255228	1255228	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1S	779	broad.mit.edu	37	1	201016619	201016619	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1S	779	broad.mit.edu	37	1	201039427	201039427	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA2D1	781	broad.mit.edu	37	7	81689761	81689761	+	Missense_Mutation	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA2D4	93589	broad.mit.edu	37	12	1943326	1943326	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNG1	786	broad.mit.edu	37	17	65040956	65040956	+	Silent	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNG3	10368	broad.mit.edu	37	16	24268293	24268293	+	Intron	SNP	A	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNG3	10368	broad.mit.edu	37	16	24366360	24366360	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNG5	27091	broad.mit.edu	37	17	64873633	64873633	+	Silent	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAD	790	broad.mit.edu	37	2	27457406	27457406	+	Silent	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALN1	83698	broad.mit.edu	37	7	71571317	71571317	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAND2	23066	broad.mit.edu	37	3	12857205	12857205	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CANT1	124583	broad.mit.edu	37	17	76993512	76993512	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPN2	824	broad.mit.edu	37	1	223934731	223934731	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CARD11	84433	broad.mit.edu	37	7	2951946	2951946	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CARD11	84433	broad.mit.edu	37	7	2963813	2963813	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CARNS1	57571	broad.mit.edu	37	11	67190960	67190960	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASKIN1	57524	broad.mit.edu	37	16	2239583	2239583	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASP2	835	broad.mit.edu	37	7	143000892	143000892	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASP8AP2	9994	broad.mit.edu	37	6	90572173	90572173	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CATSPER2	117155	broad.mit.edu	37	15	43939636	43939636	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCBL1	883	broad.mit.edu	37	9	131605146	131605146	+	Intron	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC106	29903	broad.mit.edu	37	19	56160838	56160838	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC123	84902	broad.mit.edu	37	19	33392156	33392156	+	Silent	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC141	285025	broad.mit.edu	37	2	179702053	179702053	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC141	285025	broad.mit.edu	37	2	179702335	179702335	+	Missense_Mutation	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC144C	348254	broad.mit.edu	37	17	20227624	20227624	+	Intron	DEL	A	-	-			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC18	343099	broad.mit.edu	37	1	93646523	93646523	+	Intron	SNP	G	A	A	rs76205214	byFrequency;by1000genomes	TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC46	201134	broad.mit.edu	37	17	63848085	63848085	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC57	284001	broad.mit.edu	37	17	80129781	80129781	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC60	160777	broad.mit.edu	37	12	119866454	119866454	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC63	160762	broad.mit.edu	37	12	111291371	111291371	+	Missense_Mutation	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC93	54520	broad.mit.edu	37	2	118688558	118688558	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCL22	6367	broad.mit.edu	37	16	57392777	57392777	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCNB3	85417	broad.mit.edu	37	X	50051724	50051724	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCS	9973	broad.mit.edu	37	11	66368020	66368020	+	Silent	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCT7	10574	broad.mit.edu	37	2	73478400	73478400	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD1B	910	broad.mit.edu	37	1	158298024	158298024	+	3'UTR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD1B	910	broad.mit.edu	37	1	158299199	158299199	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD207	50489	broad.mit.edu	37	2	71058869	71058870	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD248	57124	broad.mit.edu	37	11	66082936	66082936	+	Nonsense_Mutation	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD300C	10871	broad.mit.edu	37	17	72541045	72541045	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD300LB	124599	broad.mit.edu	37	17	72527721	72527721	+	5'Flank	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD33	945	broad.mit.edu	37	19	51729106	51729106	+	Missense_Mutation	SNP	G	T	T	rs76522752		TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD34	947	broad.mit.edu	37	1	208072592	208072592	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD3D	915	broad.mit.edu	37	11	118210393	118210393	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD80	941	broad.mit.edu	37	3	119263667	119263667	+	Missense_Mutation	SNP	A	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD86	942	broad.mit.edu	37	3	121825185	121825185	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD96	10225	broad.mit.edu	37	3	111304157	111304157	+	Intron	SNP	A	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC14C	168448	broad.mit.edu	37	7	48964719	48964719	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC20B	166979	broad.mit.edu	37	5	54423141	54423141	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC42BPB	9578	broad.mit.edu	37	14	103416313	103416313	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDCP1	64866	broad.mit.edu	37	3	45153906	45153906	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH10	1008	broad.mit.edu	37	5	24537671	24537671	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH10	1008	broad.mit.edu	37	5	24593550	24593550	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH12	1010	broad.mit.edu	37	5	21884018	21884018	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH18	1016	broad.mit.edu	37	5	19721647	19721647	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH18	1016	broad.mit.edu	37	5	19838945	19838945	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH1	999	broad.mit.edu	37	16	68853411	68853411	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH20	28316	broad.mit.edu	37	18	59157724	59157724	+	5'Flank	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH4	1002	broad.mit.edu	37	20	60348120	60348120	+	Missense_Mutation	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH4	1002	broad.mit.edu	37	20	60470149	60470149	+	Intron	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH5	1003	broad.mit.edu	37	16	66436898	66436898	+	Silent	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH6	1004	broad.mit.edu	37	5	31322878	31322878	+	Intron	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH6	1004	broad.mit.edu	37	5	31323321	31323321	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH6	1004	broad.mit.edu	37	5	31323516	31323516	+	3'UTR	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH9	1007	broad.mit.edu	37	5	26881641	26881641	+	Silent	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDHR3	222256	broad.mit.edu	37	7	105661087	105661087	+	Intron	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK19	23097	broad.mit.edu	37	6	110947904	110947904	+	Intron	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDKN2A	1029	broad.mit.edu	37	9	21968276	21968276	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDS2	8760	broad.mit.edu	37	20	5166437	5166437	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEACAM1	634	broad.mit.edu	37	19	43015917	43015917	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CECR2	27443	broad.mit.edu	37	22	17983998	17983998	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELA2A	63036	broad.mit.edu	37	1	15788109	15788109	+	Silent	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELF5	60680	broad.mit.edu	37	19	3293293	3293293	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CENPC1	1060	broad.mit.edu	37	4	68374686	68374686	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CENPE	1062	broad.mit.edu	37	4	104067249	104067249	+	Missense_Mutation	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP164	22897	broad.mit.edu	37	11	117233039	117233039	+	Intron	SNP	A	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP250	11190	broad.mit.edu	37	20	34059740	34059740	+	Intron	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP250	11190	broad.mit.edu	37	20	34090885	34090885	+	Missense_Mutation	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CES2	8824	broad.mit.edu	37	16	66976710	66976710	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFHR4	10877	broad.mit.edu	37	1	196871708	196871708	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHAF1A	10036	broad.mit.edu	37	19	4409849	4409849	+	Intron	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHAF1A	10036	broad.mit.edu	37	19	4429352	4429352	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHAT	1103	broad.mit.edu	37	10	50857714	50857714	+	Intron	DEL	C	-	-			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD3	1107	broad.mit.edu	37	17	7806546	7806546	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD5	26038	broad.mit.edu	37	1	6185835	6185835	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD5	26038	broad.mit.edu	37	1	6186578	6186579	+	Intron	DNP	CC	AA	AA			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD6	84181	broad.mit.edu	37	20	40080657	40080657	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHGB	1114	broad.mit.edu	37	20	5903859	5903859	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHIT1	1118	broad.mit.edu	37	1	203194102	203194102	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHMP7	91782	broad.mit.edu	37	8	23116469	23116469	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRAC1	54108	broad.mit.edu	37	8	141524616	141524616	+	Intron	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRM3	1131	broad.mit.edu	37	1	240070814	240070814	+	Silent	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRNB3	1142	broad.mit.edu	37	8	42581163	42581163	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRND	1144	broad.mit.edu	37	2	233392133	233392133	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRND	1144	broad.mit.edu	37	2	233398732	233398732	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRND	1144	broad.mit.edu	37	2	233399824	233399824	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHSY3	337876	broad.mit.edu	37	5	129521374	129521374	+	Missense_Mutation	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CIB3	117286	broad.mit.edu	37	19	16272226	16272226	+	3'UTR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCN1	1180	broad.mit.edu	37	7	143020555	143020555	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCN2	1181	broad.mit.edu	37	3	184076898	184076898	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLDN17	26285	broad.mit.edu	37	21	31538801	31538801	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLDN8	9073	broad.mit.edu	37	21	31588141	31588141	+	Missense_Mutation	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC10A	10462	broad.mit.edu	37	17	6978391	6978391	+	Silent	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC1B	51266	broad.mit.edu	37	12	10147844	10147844	+	Missense_Mutation	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC3B	7123	broad.mit.edu	37	3	45077113	45077113	+	Silent	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC4A	50856	broad.mit.edu	37	12	8286766	8286766	+	Intron	SNP	C	T	T	rs111886055		TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC4A	50856	broad.mit.edu	37	12	8289546	8289546	+	Intron	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLK2P	1197	broad.mit.edu	37	7	23625767	23625767	+	5'UTR	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLSTN2	64084	broad.mit.edu	37	3	140281579	140281579	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLVS1	157807	broad.mit.edu	37	8	62370920	62370920	+	Missense_Mutation	SNP	T	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLYBL	171425	broad.mit.edu	37	13	100425245	100425245	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CMIP	80790	broad.mit.edu	37	16	81735260	81735260	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CMTM5	116173	broad.mit.edu	37	14	23847785	23847785	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNGB1	1258	broad.mit.edu	37	16	57994668	57994668	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNGB3	54714	broad.mit.edu	37	8	87645092	87645092	+	Missense_Mutation	SNP	C	A	A	rs147876778	byFrequency	TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNKSR1	10256	broad.mit.edu	37	1	26515042	26515042	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNN3	1266	broad.mit.edu	37	1	95363333	95363333	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNOT6	57472	broad.mit.edu	37	5	180000988	180000988	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTD2	79935	broad.mit.edu	37	19	40730644	40730644	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN1	1272	broad.mit.edu	37	12	41423090	41423090	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN2	6900	broad.mit.edu	37	1	205042741	205042741	+	Intron	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP2	26047	broad.mit.edu	37	7	147815072	147815072	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP3	79937	broad.mit.edu	37	9	39178102	39178102	+	Intron	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP5	129684	broad.mit.edu	37	2	125367452	125367452	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COG5	10466	broad.mit.edu	37	7	107204382	107204382	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103427840	103427840	+	Intron	SNP	A	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A2	1302	broad.mit.edu	37	6	33145571	33145571	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL12A1	1303	broad.mit.edu	37	6	75840486	75840486	+	Intron	SNP	C	A	A	rs143357577	by1000genomes	TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL13A1	1305	broad.mit.edu	37	10	71665548	71665548	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL14A1	7373	broad.mit.edu	37	8	121344352	121344352	+	Intron	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL15A1	1306	broad.mit.edu	37	9	101748080	101748080	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL15A1	1306	broad.mit.edu	37	9	101749383	101749383	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL19A1	1310	broad.mit.edu	37	6	70733619	70733619	+	Intron	SNP	A	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL22A1	169044	broad.mit.edu	37	8	139631817	139631817	+	Intron	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL22A1	169044	broad.mit.edu	37	8	139737770	139737771	+	Intron	DNP	GG	TT	TT			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL22A1	169044	broad.mit.edu	37	8	139825017	139825017	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL24A1	255631	broad.mit.edu	37	1	86246909	86246909	+	Silent	SNP	A	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL24A1	255631	broad.mit.edu	37	1	86497581	86497581	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL29A1	256076	broad.mit.edu	37	3	130187917	130187917	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A1	1282	broad.mit.edu	37	13	110814762	110814762	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A1	1282	broad.mit.edu	37	13	110829281	110829281	+	Silent	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A2	1284	broad.mit.edu	37	13	111092175	111092175	+	Nonsense_Mutation	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A2	1284	broad.mit.edu	37	13	111098172	111098172	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A6	1288	broad.mit.edu	37	X	107403709	107403709	+	Silent	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A6	1288	broad.mit.edu	37	X	107407980	107407980	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A3	50509	broad.mit.edu	37	19	10108083	10108083	+	Silent	SNP	G	T	T	rs150339396		TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL6A6	131873	broad.mit.edu	37	3	130363954	130363954	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL7A1	1294	broad.mit.edu	37	3	48615841	48615841	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL9A1	1297	broad.mit.edu	37	6	71011650	71011650	+	Intron	SNP	T	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL9A3	1299	broad.mit.edu	37	20	61460892	61460892	+	Intron	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COLQ	8292	broad.mit.edu	37	3	15493117	15493117	+	3'UTR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COPG	22820	broad.mit.edu	37	3	128982866	128982866	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CORIN	10699	broad.mit.edu	37	4	47708553	47708553	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CORO1C	23603	broad.mit.edu	37	12	109042473	109042473	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPA4	51200	broad.mit.edu	37	7	129933124	129933124	+	Intron	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPA4	51200	broad.mit.edu	37	7	129938671	129938671	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPA4	51200	broad.mit.edu	37	7	129945839	129945839	+	Intron	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPA6	57094	broad.mit.edu	37	8	68334754	68334754	+	Silent	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPB1	1360	broad.mit.edu	37	3	148558510	148558510	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPB1	1360	broad.mit.edu	37	3	148575195	148575195	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPE	1363	broad.mit.edu	37	4	166325877	166325877	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPE	1363	broad.mit.edu	37	4	166385677	166385677	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPE	1363	broad.mit.edu	37	4	166405728	166405728	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPLX1	10815	broad.mit.edu	37	4	818128	818128	+	Intron	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPN1	1369	broad.mit.edu	37	10	101829445	101829445	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPN2	1370	broad.mit.edu	37	3	194062671	194062671	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPNE6	9362	broad.mit.edu	37	14	24546478	24546478	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPSF3	51692	broad.mit.edu	37	2	9583777	9583777	+	Missense_Mutation	SNP	A	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPSF3	51692	broad.mit.edu	37	2	9583780	9583780	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CR1	1378	broad.mit.edu	37	1	207751170	207751170	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRISP1	167	broad.mit.edu	37	6	49819733	49819733	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRISP3	10321	broad.mit.edu	37	6	49703163	49703163	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CROCCL1	84809	broad.mit.edu	37	1	16948518	16948518	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRP	1401	broad.mit.edu	37	1	159684159	159684159	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRTAC1	55118	broad.mit.edu	37	10	99696156	99696156	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRYGN	155051	broad.mit.edu	37	7	151133461	151133461	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRYGS	1427	broad.mit.edu	37	3	186257006	186257006	+	Intron	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSAG1	158511	broad.mit.edu	37	X	151904401	151904416	+	Intron	DEL	TAGATTTTCTTGCTAA	-	-	rs143837299	by1000genomes	TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSF1R	1436	broad.mit.edu	37	5	149437175	149437175	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSGALNACT2	55454	broad.mit.edu	37	10	43654172	43654172	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSGALNACT2	55454	broad.mit.edu	37	10	43659278	43659279	+	Intron	DNP	GG	CT	CT			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	2813044	2813044	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	3000072	3000072	+	Silent	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113241048	113241048	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113246653	113246653	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113277872	113277872	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113323338	113323339	+	Missense_Mutation	DNP	CC	AA	AA	rs141864545		TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113648979	113648979	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113697661	113697661	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113702294	113702294	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	114448864	114448864	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSNK1E	1454	broad.mit.edu	37	22	38690126	38690126	+	Missense_Mutation	SNP	G	A	A	rs137966537	byFrequency	TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CST11	140880	broad.mit.edu	37	20	23433496	23433496	+	5'Flank	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CST1	1469	broad.mit.edu	37	20	23731392	23731392	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTAGE5	4253	broad.mit.edu	37	14	39796221	39796221	+	Missense_Mutation	SNP	C	T	T	rs149036910	byFrequency	TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTCF	10664	broad.mit.edu	37	16	67654636	67654636	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTDSPL2	51496	broad.mit.edu	37	15	44740819	44740819	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNND2	1501	broad.mit.edu	37	5	11346597	11346597	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTRC	11330	broad.mit.edu	37	1	15765007	15765007	+	Intron	DEL	G	-	-			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTSG	1511	broad.mit.edu	37	14	25042889	25042889	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTXN3	613212	broad.mit.edu	37	5	126993374	126993374	+	Missense_Mutation	SNP	A	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUL3	8452	broad.mit.edu	37	2	225346795	225346795	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXorf1	9142	broad.mit.edu	37	X	144909468	144909468	+	Silent	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXorf41	139212	broad.mit.edu	37	X	106486460	106486460	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXorf48	54967	broad.mit.edu	37	X	134303589	134303589	+	Silent	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYB561	1534	broad.mit.edu	37	17	61511984	61511984	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYB5R4	51167	broad.mit.edu	37	6	84569531	84569532	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYC1	1537	broad.mit.edu	37	8	145150838	145150838	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP11B1	1584	broad.mit.edu	37	8	143960608	143960608	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP2A13	1553	broad.mit.edu	37	19	41594903	41594903	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP3A4	1576	broad.mit.edu	37	7	99367913	99367913	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP46A1	10858	broad.mit.edu	37	14	100165801	100165801	+	Splice_Site	SNP	A	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP4F12	66002	broad.mit.edu	37	19	15793116	15793116	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP4F2	8529	broad.mit.edu	37	19	15996946	15996946	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP4F3	4051	broad.mit.edu	37	19	15769110	15769110	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP4X1	260293	broad.mit.edu	37	1	47496893	47496893	+	Intron	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYTH2	9266	broad.mit.edu	37	19	48973506	48973506	+	Intron	SNP	A	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYTH2	9266	broad.mit.edu	37	19	48973508	48973508	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAB1	1600	broad.mit.edu	37	1	59002474	59002474	+	Intron	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF12L2	340578	broad.mit.edu	37	X	125299720	125299720	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF5	8816	broad.mit.edu	37	14	69520616	69520616	+	Silent	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCC	1630	broad.mit.edu	37	18	50848396	50848396	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCHS2	54798	broad.mit.edu	37	4	155249266	155249266	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCLK1	9201	broad.mit.edu	37	13	36367660	36367660	+	Intron	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCLRE1A	9937	broad.mit.edu	37	10	115609774	115609774	+	Missense_Mutation	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCN	1634	broad.mit.edu	37	12	91572091	91572091	+	Intron	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCPS	28960	broad.mit.edu	37	11	126176481	126176481	+	Missense_Mutation	SNP	G	T	T	rs11557735		TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDB1	1642	broad.mit.edu	37	11	61091481	61091481	+	Silent	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX11	1663	broad.mit.edu	37	12	31251012	31251012	+	Intron	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX18	8886	broad.mit.edu	37	2	118572260	118572260	+	5'UTR	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX24	57062	broad.mit.edu	37	14	94545842	94545842	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX31	64794	broad.mit.edu	37	9	135521285	135521285	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX51	317781	broad.mit.edu	37	12	132624412	132624412	+	Silent	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEF8	54849	broad.mit.edu	37	16	90025465	90025465	+	Missense_Mutation	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEF8	54849	broad.mit.edu	37	16	90028432	90028432	+	Missense_Mutation	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND2A	27147	broad.mit.edu	37	7	140221569	140221569	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND2D	79961	broad.mit.edu	37	1	111741195	111741195	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND5A	23258	broad.mit.edu	37	11	9225561	9225561	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND5B	160518	broad.mit.edu	37	12	31613379	31613379	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DFNB31	25861	broad.mit.edu	37	9	117165337	117165337	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGCR2	9993	broad.mit.edu	37	22	19035861	19035861	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKB	1607	broad.mit.edu	37	7	14722152	14722152	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKG	1608	broad.mit.edu	37	3	185882676	185882676	+	Intron	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKG	1608	broad.mit.edu	37	3	185997780	185997780	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHFRL1	200895	broad.mit.edu	37	3	93780073	93780073	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX35	60625	broad.mit.edu	37	20	37597998	37597998	+	Intron	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX40P1	653645	broad.mit.edu	37	17	58088552	58088552	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX57	90957	broad.mit.edu	37	2	39075411	39075411	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIO2	1734	broad.mit.edu	37	14	80669444	80669444	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIO2	1734	broad.mit.edu	37	14	80672001	80672001	+	Intron	SNP	T	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIO2	1734	broad.mit.edu	37	14	80677716	80677716	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIP2C	22982	broad.mit.edu	37	10	410378	410378	+	Missense_Mutation	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIRC1	116093	broad.mit.edu	37	2	189599394	189599394	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIS3	22894	broad.mit.edu	37	13	73348274	73348274	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DISP1	84976	broad.mit.edu	37	1	223176687	223176687	+	Missense_Mutation	SNP	A	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DKFZP434L187	26082	broad.mit.edu	37	15	30516658	30516658	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLG2	1740	broad.mit.edu	37	11	83170832	83170832	+	3'UTR	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLGAP2	9228	broad.mit.edu	37	8	1581255	1581255	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLK1	8788	broad.mit.edu	37	14	101195108	101195108	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLK1	8788	broad.mit.edu	37	14	101200978	101200978	+	Silent	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLX2	1746	broad.mit.edu	37	2	172965595	172965595	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMD	1756	broad.mit.edu	37	X	31514907	31514907	+	Missense_Mutation	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMPK	1760	broad.mit.edu	37	19	46275986	46275986	+	Silent	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMTF1	9988	broad.mit.edu	37	7	86820288	86820288	+	Missense_Mutation	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH10	196385	broad.mit.edu	37	12	124323331	124323331	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH11	8701	broad.mit.edu	37	7	21747331	21747331	+	Silent	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH5	1767	broad.mit.edu	37	5	13708040	13708040	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH5	1767	broad.mit.edu	37	5	13751281	13751281	+	Missense_Mutation	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH7	56171	broad.mit.edu	37	2	196661269	196661269	+	Intron	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH7	56171	broad.mit.edu	37	2	196709748	196709748	+	Missense_Mutation	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH7	56171	broad.mit.edu	37	2	196859260	196859261	+	Intron	DNP	CC	AA	AA			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH8	1769	broad.mit.edu	37	6	38690781	38690781	+	5'UTR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH8	1769	broad.mit.edu	37	6	38820606	38820606	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11696994	11696994	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11786980	11786980	+	Silent	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAI1	27019	broad.mit.edu	37	9	34485241	34485241	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAI2	64446	broad.mit.edu	37	17	72297056	72297056	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJB2	3300	broad.mit.edu	37	2	220146344	220146344	+	Intron	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNHD1	144132	broad.mit.edu	37	11	6520073	6520073	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNM1L	10059	broad.mit.edu	37	12	32873785	32873785	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNMT3B	1789	broad.mit.edu	37	20	31386209	31386209	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK1	1793	broad.mit.edu	37	10	128769018	128769018	+	Silent	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK2	1794	broad.mit.edu	37	5	169141187	169141187	+	Silent	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK4	9732	broad.mit.edu	37	7	111584999	111584999	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK5	80005	broad.mit.edu	37	8	25101317	25101317	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK5	80005	broad.mit.edu	37	8	25226115	25226115	+	Silent	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK7	85440	broad.mit.edu	37	1	62995099	62995099	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK9	23348	broad.mit.edu	37	13	99462534	99462534	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOK6	220164	broad.mit.edu	37	18	67344967	67344967	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOPEY1	23033	broad.mit.edu	37	6	83820084	83820085	+	Intron	DNP	GG	TT	TT			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP10	57628	broad.mit.edu	37	2	116101362	116101362	+	Intron	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP10	57628	broad.mit.edu	37	2	116526064	116526064	+	Intron	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPY19L2P1	554236	broad.mit.edu	37	7	35204524	35204524	+	5'UTR	SNP	T	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPYSL3	1809	broad.mit.edu	37	5	146788307	146788307	+	Missense_Mutation	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPYSL4	10570	broad.mit.edu	37	10	134014081	134014082	+	Intron	DNP	CC	AA	AA			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPYSL5	56896	broad.mit.edu	37	2	27164673	27164673	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSC3	1825	broad.mit.edu	37	18	28610993	28610993	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSCAML1	57453	broad.mit.edu	37	11	117335693	117335693	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSCAM	1826	broad.mit.edu	37	21	41684194	41684194	+	Missense_Mutation	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSG1	1828	broad.mit.edu	37	18	28934808	28934808	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSTYK	25778	broad.mit.edu	37	1	205138360	205138360	+	Missense_Mutation	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DST	667	broad.mit.edu	37	6	56500450	56500450	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DTX3L	151636	broad.mit.edu	37	3	122290646	122290646	+	3'UTR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUOX1	53905	broad.mit.edu	37	15	45453242	45453242	+	Intron	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUOX2	50506	broad.mit.edu	37	15	45389466	45389466	+	Missense_Mutation	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP9	1852	broad.mit.edu	37	X	152914893	152914893	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYM	54808	broad.mit.edu	37	18	46783427	46783427	+	Silent	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNC1H1	1778	broad.mit.edu	37	14	102493773	102493773	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNC1LI1	51143	broad.mit.edu	37	3	32612316	32612316	+	5'UTR	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
E2F7	144455	broad.mit.edu	37	12	77419548	77419548	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
E2F8	79733	broad.mit.edu	37	11	19256308	19256308	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
E4F1	1877	broad.mit.edu	37	16	2279719	2279719	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EBF1	1879	broad.mit.edu	37	5	158500387	158500387	+	Intron	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EBI3	10148	broad.mit.edu	37	19	4234872	4234872	+	Intron	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ECE2	9718	broad.mit.edu	37	3	183995122	183995122	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EDARADD	128178	broad.mit.edu	37	1	236631367	236631367	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EDDM3A	10876	broad.mit.edu	37	14	21216183	21216183	+	Nonstop_Mutation	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EDN3	1908	broad.mit.edu	37	20	57899434	57899434	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EEF1A2	1917	broad.mit.edu	37	20	62129281	62129281	+	5'Flank	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFCAB5	374786	broad.mit.edu	37	17	28434942	28434942	+	Missense_Mutation	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFHD1	80303	broad.mit.edu	37	2	233546153	233546153	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFTUD2	9343	broad.mit.edu	37	17	42930912	42930912	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGR4	1961	broad.mit.edu	37	2	73520449	73520449	+	Silent	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EHMT1	79813	broad.mit.edu	37	9	140638040	140638040	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EHMT1	79813	broad.mit.edu	37	9	140729344	140729344	+	Missense_Mutation	SNP	A	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF2C2	27161	broad.mit.edu	37	8	141567245	141567245	+	Silent	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF3B	8662	broad.mit.edu	37	7	2412253	2412253	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELAVL2	1993	broad.mit.edu	37	9	23705079	23705079	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELAVL4	1996	broad.mit.edu	37	1	50659500	50659500	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELF4	2000	broad.mit.edu	37	X	129208743	129208743	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELFN2	114794	broad.mit.edu	37	22	37770562	37770562	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELMO1	9844	broad.mit.edu	37	7	37354440	37354440	+	Intron	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELN	2006	broad.mit.edu	37	7	73450802	73450802	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELOVL2	54898	broad.mit.edu	37	6	10995164	10995164	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELSPBP1	64100	broad.mit.edu	37	19	48517467	48517467	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EMG1	10436	broad.mit.edu	37	12	7083817	7083817	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENGASE	64772	broad.mit.edu	37	17	77081425	77081425	+	Splice_Site	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENG	2022	broad.mit.edu	37	9	130605503	130605503	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENOX1	55068	broad.mit.edu	37	13	43918817	43918817	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENOX1	55068	broad.mit.edu	37	13	43935509	43935509	+	Silent	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENY2	56943	broad.mit.edu	37	8	110346578	110346578	+	5'Flank	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EP400	57634	broad.mit.edu	37	12	132561930	132561930	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB41L5	57669	broad.mit.edu	37	2	120835996	120835996	+	Intron	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA3	2042	broad.mit.edu	37	3	89390902	89390902	+	Intron	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA8	2046	broad.mit.edu	37	1	22902947	22902948	+	Frame_Shift_Ins	INS	-	T	T	rs138738837	byFrequency	TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB1	2047	broad.mit.edu	37	3	134644612	134644612	+	Intron	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB1	2047	broad.mit.edu	37	3	134670266	134670266	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB1	2047	broad.mit.edu	37	3	134920579	134920579	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB4	2050	broad.mit.edu	37	7	100403408	100403408	+	Intron	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB6	2051	broad.mit.edu	37	7	142564194	142564194	+	Intron	SNP	A	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB6	2051	broad.mit.edu	37	7	142568609	142568609	+	Silent	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPS15L1	58513	broad.mit.edu	37	19	16503255	16503255	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPYC	1833	broad.mit.edu	37	12	91396094	91396094	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERC2	26059	broad.mit.edu	37	3	56207487	56207487	+	Missense_Mutation	SNP	A	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERCC4	2072	broad.mit.edu	37	16	14041959	14041959	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERI2	112479	broad.mit.edu	37	16	20873370	20873370	+	Intron	DEL	C	-	-			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERN2	10595	broad.mit.edu	37	16	23721427	23721427	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESM1	11082	broad.mit.edu	37	5	54275327	54275327	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESRRB	2103	broad.mit.edu	37	14	76905914	76905914	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESRRB	2103	broad.mit.edu	37	14	76929102	76929102	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EVI2B	2124	broad.mit.edu	37	17	29631301	29631301	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EVPL	2125	broad.mit.edu	37	17	74014575	74014575	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOC4	60412	broad.mit.edu	37	7	133622473	133622473	+	Intron	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOSC3	51010	broad.mit.edu	37	9	37785051	37785051	+	5'UTR	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EYA1	2138	broad.mit.edu	37	8	72184058	72184058	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EYS	346007	broad.mit.edu	37	6	66094394	66094394	+	Splice_Site	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EZH1	2145	broad.mit.edu	37	17	40865465	40865465	+	Intron	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F10	2159	broad.mit.edu	37	13	113801935	113801935	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAHD2B	151313	broad.mit.edu	37	2	97749976	97749976	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM114A2	10827	broad.mit.edu	37	5	153381950	153381950	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM122C	159091	broad.mit.edu	37	X	133941868	133941868	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM123B	139285	broad.mit.edu	37	X	63411430	63411430	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM128B	80097	broad.mit.edu	37	2	130948287	130948287	+	3'UTR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM131B	9715	broad.mit.edu	37	7	143056562	143056562	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM135A	57579	broad.mit.edu	37	6	71235818	71235818	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM135B	51059	broad.mit.edu	37	8	139207383	139207383	+	Intron	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM13B	51306	broad.mit.edu	37	5	137354124	137354124	+	Silent	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM13C	220965	broad.mit.edu	37	10	61062572	61062572	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM169A	26049	broad.mit.edu	37	5	74095254	74095254	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM171A1	221061	broad.mit.edu	37	10	15254994	15254994	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM177B	400823	broad.mit.edu	37	1	222923200	222923200	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM179A	165186	broad.mit.edu	37	2	29234250	29234250	+	Intron	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM19A2	338811	broad.mit.edu	37	12	62104171	62104171	+	3'UTR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM19A4	151647	broad.mit.edu	37	3	68802096	68802096	+	Missense_Mutation	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM38B	63895	broad.mit.edu	37	18	10671787	10671787	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM46D	169966	broad.mit.edu	37	X	79698195	79698195	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM47A	158724	broad.mit.edu	37	X	34148158	34148158	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM55D	54827	broad.mit.edu	37	11	114465538	114465538	+	Intron	SNP	A	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM5C	339479	broad.mit.edu	37	1	190067155	190067155	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM5C	339479	broad.mit.edu	37	1	190203541	190203541	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM5C	339479	broad.mit.edu	37	1	190234069	190234069	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM63A	55793	broad.mit.edu	37	1	150970273	150970273	+	Intron	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM65B	9750	broad.mit.edu	37	6	24843402	24843402	+	Missense_Mutation	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM70B	348013	broad.mit.edu	37	13	114507819	114507819	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM75A3	727830	broad.mit.edu	37	9	40702836	40702836	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM75A6	389730	broad.mit.edu	37	9	43629302	43629302	+	Silent	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM75A6	389730	broad.mit.edu	37	9	43630825	43630825	+	5'Flank	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM83F	113828	broad.mit.edu	37	22	40415783	40415783	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM91A1	157769	broad.mit.edu	37	8	124818616	124818616	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FANCD2	2177	broad.mit.edu	37	3	10140682	10140682	+	3'UTR	SNP	A	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FANCE	2178	broad.mit.edu	37	6	35424179	35424179	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FANCM	57697	broad.mit.edu	37	14	45645702	45645702	+	Missense_Mutation	SNP	A	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FANCM	57697	broad.mit.edu	37	14	45658239	45658239	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAR2	55711	broad.mit.edu	37	12	29450256	29450256	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FASN	2194	broad.mit.edu	37	17	80045115	80045115	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FASTKD5	60493	broad.mit.edu	37	20	3128165	3128165	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT2	2196	broad.mit.edu	37	5	150905354	150905354	+	Missense_Mutation	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT3	120114	broad.mit.edu	37	11	92085508	92085508	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT3	120114	broad.mit.edu	37	11	92533122	92533122	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT3	120114	broad.mit.edu	37	11	92616436	92616436	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT4	79633	broad.mit.edu	37	4	126241500	126241500	+	Missense_Mutation	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT4	79633	broad.mit.edu	37	4	126336650	126336650	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBLN5	10516	broad.mit.edu	37	14	92353727	92353727	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN2	2201	broad.mit.edu	37	5	127710262	127710262	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN2	2201	broad.mit.edu	37	5	127730962	127730962	+	Nonsense_Mutation	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN3	84467	broad.mit.edu	37	19	8176862	8176862	+	Silent	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXL7	23194	broad.mit.edu	37	5	15927930	15927930	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXL7	23194	broad.mit.edu	37	5	15927936	15927936	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO24	26261	broad.mit.edu	37	7	100184162	100184162	+	5'UTR	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO32	114907	broad.mit.edu	37	8	124545499	124545499	+	Intron	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO36	130888	broad.mit.edu	37	2	230861767	230861767	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO42	54455	broad.mit.edu	37	1	16578650	16578650	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXW8	26259	broad.mit.edu	37	12	117448436	117448436	+	Intron	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCER1A	2205	broad.mit.edu	37	1	159272631	159272631	+	Intron	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCER1G	2207	broad.mit.edu	37	1	161187846	161187846	+	Silent	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCGR2A	2212	broad.mit.edu	37	1	161483836	161483836	+	Intron	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRL2	79368	broad.mit.edu	37	1	157740181	157740181	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRL3	115352	broad.mit.edu	37	1	157659676	157659676	+	Silent	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRL4	83417	broad.mit.edu	37	1	157550266	157550266	+	Intron	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRL5	83416	broad.mit.edu	37	1	157490914	157490914	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FDXR	2232	broad.mit.edu	37	17	72862393	72862393	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FER1L6	654463	broad.mit.edu	37	8	124989713	124989713	+	Silent	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FER1L6	654463	broad.mit.edu	37	8	125023085	125023085	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FER1L6	654463	broad.mit.edu	37	8	125074234	125074234	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FER1L6	654463	broad.mit.edu	37	8	125078855	125078855	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FER1L6	654463	broad.mit.edu	37	8	125079976	125079976	+	Intron	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FER1L6	654463	broad.mit.edu	37	8	125103928	125103928	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGD6	55785	broad.mit.edu	37	12	95535446	95535446	+	Intron	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGF12	2257	broad.mit.edu	37	3	191861764	191861764	+	3'UTR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGF14	2259	broad.mit.edu	37	13	102521158	102521158	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGF14	2259	broad.mit.edu	37	13	102670779	102670779	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGF21	26291	broad.mit.edu	37	19	49260110	49260110	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FHDC1	85462	broad.mit.edu	37	4	153896629	153896629	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FHOD3	80206	broad.mit.edu	37	18	34205545	34205545	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FKBP9L	360132	broad.mit.edu	37	7	55755449	55755449	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG2	388698	broad.mit.edu	37	1	152328819	152328819	+	Silent	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152285627	152285627	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152286112	152286112	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLI1	2313	broad.mit.edu	37	11	128680738	128680739	+	Frame_Shift_Ins	INS	-	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ43950	347127	broad.mit.edu	37	9	84530530	84530530	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ43950	347127	broad.mit.edu	37	9	84530687	84530687	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ43950	347127	broad.mit.edu	37	9	84532176	84532176	+	3'UTR	SNP	A	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ46321	389763	broad.mit.edu	37	9	84605674	84605674	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLT1	2321	broad.mit.edu	37	13	29004289	29004289	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMN2	56776	broad.mit.edu	37	1	240308465	240308465	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMN2	56776	broad.mit.edu	37	1	240492642	240492642	+	Missense_Mutation	SNP	C	A	A	rs143591952		TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FNDC7	163479	broad.mit.edu	37	1	109270669	109270669	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FNIP2	57600	broad.mit.edu	37	4	159772515	159772515	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOLH1	2346	broad.mit.edu	37	11	49168457	49168457	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOLR4	390243	broad.mit.edu	37	11	94040589	94040589	+	Splice_Site	DEL	G	-	-			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXG1	2290	broad.mit.edu	37	14	29237763	29237763	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRG2B	441581	broad.mit.edu	37	10	135440169	135440169	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMPD4	9758	broad.mit.edu	37	X	12704383	12704383	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSD2	123722	broad.mit.edu	37	15	83440921	83440921	+	Silent	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSHR	2492	broad.mit.edu	37	2	49189949	49189950	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSHR	2492	broad.mit.edu	37	2	49190729	49190729	+	Missense_Mutation	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSTL5	56884	broad.mit.edu	37	4	162307436	162307436	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FTMT	94033	broad.mit.edu	37	5	121187716	121187716	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FUT10	84750	broad.mit.edu	37	8	33246764	33246764	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FXR2	9513	broad.mit.edu	37	17	7497649	7497649	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FXYD4	53828	broad.mit.edu	37	10	43869024	43869024	+	5'UTR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FYB	2533	broad.mit.edu	37	5	39169563	39169563	+	Intron	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FYTTD1	84248	broad.mit.edu	37	3	197495447	197495447	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAB4	128954	broad.mit.edu	37	22	17468885	17468885	+	Silent	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABBR2	9568	broad.mit.edu	37	9	101061687	101061687	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRA1	2554	broad.mit.edu	37	5	161292702	161292702	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRA6	2559	broad.mit.edu	37	5	161128727	161128727	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRB1	2560	broad.mit.edu	37	4	47034103	47034104	+	Intron	DEL	AG	-	-	rs67779259		TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRB3	2562	broad.mit.edu	37	15	27126228	27126228	+	Intron	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRD	2563	broad.mit.edu	37	1	1960949	1960949	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRD	2563	broad.mit.edu	37	1	1961087	1961087	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRG3	2567	broad.mit.edu	37	15	27571836	27571836	+	Intron	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRG3	2567	broad.mit.edu	37	15	27571838	27571838	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRG3	2567	broad.mit.edu	37	15	27586119	27586119	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRQ	55879	broad.mit.edu	37	X	151820222	151820222	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRR2	2570	broad.mit.edu	37	6	90012098	90012098	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GADL1	339896	broad.mit.edu	37	3	30842529	30842529	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAL3ST4	79690	broad.mit.edu	37	7	99758146	99758146	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT10	55568	broad.mit.edu	37	5	153756064	153756064	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT1	2589	broad.mit.edu	37	18	33283564	33283564	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNTL1	57452	broad.mit.edu	37	14	69800212	69800212	+	Splice_Site	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNTL2	117248	broad.mit.edu	37	3	16263881	16263881	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNTL6	442117	broad.mit.edu	37	4	172735859	172735859	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNTL6	442117	broad.mit.edu	37	4	173232936	173232936	+	Intron	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNTL6	442117	broad.mit.edu	37	4	173301167	173301167	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNTL6	442117	broad.mit.edu	37	4	173730517	173730517	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAN	8139	broad.mit.edu	37	16	81391423	81391423	+	Missense_Mutation	SNP	A	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GART	2618	broad.mit.edu	37	21	34906819	34906819	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GART	2618	broad.mit.edu	37	21	34907023	34907023	+	Missense_Mutation	SNP	C	A	A	rs145820555	byFrequency	TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GBP1	2633	broad.mit.edu	37	1	89525729	89525729	+	Intron	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GBX2	2637	broad.mit.edu	37	2	237074654	237074654	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCK	2645	broad.mit.edu	37	7	44228500	44228500	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCNT2	2651	broad.mit.edu	37	6	10626804	10626804	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GDPD1	284161	broad.mit.edu	37	17	57311945	57311945	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GDPD4	220032	broad.mit.edu	37	11	76996134	76996134	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GEFT	115557	broad.mit.edu	37	12	58009514	58009514	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GEMIN5	25929	broad.mit.edu	37	5	154306888	154306888	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GFM2	84340	broad.mit.edu	37	5	74063022	74063022	+	5'UTR	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GFRAL	389400	broad.mit.edu	37	6	55266543	55266543	+	Intron	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GGT8P	645367	broad.mit.edu	37	2	91968430	91968430	+	Intron	DEL	C	-	-			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GHRHR	2692	broad.mit.edu	37	7	31016237	31016238	+	Intron	DNP	AC	TT	TT			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GIGYF1	64599	broad.mit.edu	37	7	100280514	100280514	+	Intron	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GIMAP1	170575	broad.mit.edu	37	7	150416336	150416336	+	Intron	SNP	G	T	T	rs141813224	by1000genomes	TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GIPC1	10755	broad.mit.edu	37	19	14593722	14593722	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GIPC1	10755	broad.mit.edu	37	19	14593830	14593830	+	Intron	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GJD4	219770	broad.mit.edu	37	10	35894692	35894692	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLDC	2731	broad.mit.edu	37	9	6534752	6534752	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLDC	2731	broad.mit.edu	37	9	6606658	6606658	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLI1	2735	broad.mit.edu	37	12	57865862	57865862	+	3'UTR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLRA1	2741	broad.mit.edu	37	5	151229710	151229710	+	Intron	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLS2	27165	broad.mit.edu	37	12	56867227	56867227	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLT1D1	144423	broad.mit.edu	37	12	129373263	129373263	+	Silent	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLT1D1	144423	broad.mit.edu	37	12	129442081	129442081	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLT25D2	23127	broad.mit.edu	37	1	183913489	183913489	+	Intron	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLT25D2	23127	broad.mit.edu	37	1	183920059	183920059	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLUL	2752	broad.mit.edu	37	1	182354738	182354738	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLGA5	9950	broad.mit.edu	37	14	93286037	93286037	+	Intron	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLGA6C	653641	broad.mit.edu	37	15	75562442	75562442	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLM1	51280	broad.mit.edu	37	9	88651390	88651390	+	Silent	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPAT2	150763	broad.mit.edu	37	2	96689826	96689826	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPC2	221914	broad.mit.edu	37	7	99773279	99773279	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPC3	2719	broad.mit.edu	37	X	132730525	132730525	+	Missense_Mutation	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPC6	10082	broad.mit.edu	37	13	94938671	94938671	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPD1L	23171	broad.mit.edu	37	3	32180072	32180072	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPD1	2819	broad.mit.edu	37	12	50497978	50497978	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPN1	11321	broad.mit.edu	37	2	27861952	27861952	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPNMB	10457	broad.mit.edu	37	7	23299711	23299711	+	Silent	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR124	25960	broad.mit.edu	37	8	37692865	37692865	+	Silent	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR149	344758	broad.mit.edu	37	3	154055653	154055653	+	Silent	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR158	57512	broad.mit.edu	37	10	25510017	25510017	+	Silent	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR158	57512	broad.mit.edu	37	10	25886893	25886893	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR158	57512	broad.mit.edu	37	10	25887673	25887673	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR179	440435	broad.mit.edu	37	17	36485601	36485601	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR35	2859	broad.mit.edu	37	2	241570038	241570038	+	Silent	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPRC5C	55890	broad.mit.edu	37	17	72429969	72429969	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRAMD1C	54762	broad.mit.edu	37	3	113604632	113604632	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRHL1	29841	broad.mit.edu	37	2	10101410	10101410	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIA2	2891	broad.mit.edu	37	4	158257624	158257624	+	Silent	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRID2	2895	broad.mit.edu	37	4	94145723	94145723	+	Intron	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRID2	2895	broad.mit.edu	37	4	94344041	94344041	+	Nonsense_Mutation	SNP	C	A	A	rs140894316	byFrequency	TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRID2	2895	broad.mit.edu	37	4	94693256	94693256	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIK3	2899	broad.mit.edu	37	1	37324537	37324537	+	Intron	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIN2B	2904	broad.mit.edu	37	12	13719990	13719990	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIN3A	116443	broad.mit.edu	37	9	104335453	104335453	+	3'UTR	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIN3A	116443	broad.mit.edu	37	9	104449333	104449333	+	Silent	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIP2	80852	broad.mit.edu	37	3	14558767	14558767	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRK4	2868	broad.mit.edu	37	4	3029638	3029639	+	Splice_Site	DNP	GG	TT	TT			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRK4	2868	broad.mit.edu	37	4	3038967	3038967	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM1	2911	broad.mit.edu	37	6	146755806	146755806	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM3	2913	broad.mit.edu	37	7	86394633	86394633	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM4	2914	broad.mit.edu	37	6	33990499	33990499	+	3'UTR	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM4	2914	broad.mit.edu	37	6	34024378	34024379	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM7	2917	broad.mit.edu	37	3	7348424	7348424	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM8	2918	broad.mit.edu	37	7	126173450	126173450	+	Silent	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSDMD	79792	broad.mit.edu	37	8	144642025	144642025	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSG1L	146395	broad.mit.edu	37	16	27802640	27802641	+	3'UTR	DNP	GG	TT	TT	rs62029147	by1000genomes	TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSTA1	2938	broad.mit.edu	37	6	52662467	52662467	+	Intron	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF2E1	2960	broad.mit.edu	37	3	120461471	120461471	+	5'Flank	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF2H1	2965	broad.mit.edu	37	11	18361254	18361254	+	Intron	SNP	A	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF3C5	9328	broad.mit.edu	37	9	135933328	135933328	+	Silent	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTPBP4	23560	broad.mit.edu	37	10	1046860	1046860	+	Intron	SNP	G	A	A	rs138913470	by1000genomes	TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUCY2F	2986	broad.mit.edu	37	X	108628408	108628408	+	Intron	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUCY2F	2986	broad.mit.edu	37	X	108652141	108652141	+	Intron	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAND2	9464	broad.mit.edu	37	4	174450170	174450170	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HARS2	23438	broad.mit.edu	37	5	140075532	140075532	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HARS2	23438	broad.mit.edu	37	5	140076891	140076891	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAUS5	23354	broad.mit.edu	37	19	36105968	36105968	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAVCR1	26762	broad.mit.edu	37	5	156459760	156459760	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAVCR1	26762	broad.mit.edu	37	5	156479505	156479505	+	Silent	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HBE1	3046	broad.mit.edu	37	11	5290996	5290996	+	Intron	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HCFC1	3054	broad.mit.edu	37	X	153224149	153224149	+	Silent	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HCFC2	29915	broad.mit.edu	37	12	104496743	104496743	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC7	51564	broad.mit.edu	37	12	48188652	48188652	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDGF	3068	broad.mit.edu	37	1	156713853	156713853	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR5B	54497	broad.mit.edu	37	2	37247992	37247992	+	Intron	SNP	A	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR7B2	133558	broad.mit.edu	37	5	41010084	41010084	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HECTD3	79654	broad.mit.edu	37	1	45469633	45469633	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HECTD3	79654	broad.mit.edu	37	1	45470039	45470039	+	Missense_Mutation	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HELZ	9931	broad.mit.edu	37	17	65146102	65146102	+	Splice_Site	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEPH	9843	broad.mit.edu	37	X	65423424	65423424	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC2P4	440362	broad.mit.edu	37	16	32164194	32164194	+	5'Flank	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HES3	390992	broad.mit.edu	37	1	6305524	6305524	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HGD	3081	broad.mit.edu	37	3	120365227	120365227	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HGF	3082	broad.mit.edu	37	7	81359038	81359038	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HHIPL2	79802	broad.mit.edu	37	1	222715345	222715345	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HHIPL2	79802	broad.mit.edu	37	1	222715445	222715445	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H1E	3008	broad.mit.edu	37	6	26156939	26156939	+	Silent	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H2AA	221613	broad.mit.edu	37	6	25727627	25727628	+	5'Flank	INS	-	T	T	rs61603783		TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST2H2AC	8338	broad.mit.edu	37	1	149858692	149858692	+	Silent	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HJURP	55355	broad.mit.edu	37	2	234749700	234749700	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HLA-DPA1	3113	broad.mit.edu	37	6	33037434	33037434	+	Silent	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HLA-G	3135	broad.mit.edu	37	6	29897161	29897161	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMCN1	83872	broad.mit.edu	37	1	185704281	185704281	+	Intron	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMGCLL1	54511	broad.mit.edu	37	6	55406798	55406798	+	Intron	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMGCS2	3158	broad.mit.edu	37	1	120298156	120298156	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMMR	3161	broad.mit.edu	37	5	162900540	162900540	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNF4G	3174	broad.mit.edu	37	8	76470801	76470801	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNF4G	3174	broad.mit.edu	37	8	76472578	76472578	+	Splice_Site	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNRNPA2B1	3181	broad.mit.edu	37	7	26237076	26237076	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNRNPC	3183	broad.mit.edu	37	14	21679518	21679518	+	Intron	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNRNPD	3184	broad.mit.edu	37	4	83277876	83277876	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNRNPM	4670	broad.mit.edu	37	19	8520518	8520518	+	Intron	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOOK2	29911	broad.mit.edu	37	19	12874440	12874440	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXA2	3199	broad.mit.edu	37	7	27140602	27140602	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXA7	3204	broad.mit.edu	37	7	27195972	27195972	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRNR	388697	broad.mit.edu	37	1	152191479	152191479	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRNR	388697	broad.mit.edu	37	1	152193740	152193740	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSCB	150274	broad.mit.edu	37	22	29140054	29140054	+	Intron	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSD11B1	3290	broad.mit.edu	37	1	209880128	209880129	+	Missense_Mutation	DNP	CG	TC	TC			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSD17B4	3295	broad.mit.edu	37	5	118814643	118814643	+	Silent	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSD17B6	8630	broad.mit.edu	37	12	57178691	57178691	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSD3B7	80270	broad.mit.edu	37	16	30997686	30997686	+	Intron	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSF5	124535	broad.mit.edu	37	17	56553583	56553583	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSFX2	100130086	broad.mit.edu	37	X	148842431	148842431	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR1E	3354	broad.mit.edu	37	6	87726241	87726241	+	3'UTR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR1F	3355	broad.mit.edu	37	3	88039841	88039841	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HYDIN	54768	broad.mit.edu	37	16	70934909	70934909	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HYDIN	54768	broad.mit.edu	37	16	70935048	70935048	+	Silent	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ICAM3	3385	broad.mit.edu	37	19	10445566	10445566	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ICAM3	3385	broad.mit.edu	37	19	10449401	10449401	+	Silent	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFI16	3428	broad.mit.edu	37	1	158988130	158988130	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFI27L1	122509	broad.mit.edu	37	14	94567239	94567239	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFNA13	3447	broad.mit.edu	37	9	21367390	21367390	+	3'UTR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFT46	56912	broad.mit.edu	37	11	118428531	118428531	+	Intron	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFT88	8100	broad.mit.edu	37	13	21171206	21171206	+	Missense_Mutation	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGDCC4	57722	broad.mit.edu	37	15	65678331	65678331	+	Silent	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGF2BP1	10642	broad.mit.edu	37	17	47104011	47104011	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGF2R	3482	broad.mit.edu	37	6	160466889	160466889	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGFBP1	3484	broad.mit.edu	37	7	45931536	45931536	+	Silent	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGFBP3	3486	broad.mit.edu	37	7	45957088	45957088	+	Intron	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGLL1	3543	broad.mit.edu	37	22	23915735	23915735	+	Silent	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF9	57549	broad.mit.edu	37	1	159901753	159901753	+	Intron	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IHH	3549	broad.mit.edu	37	2	219922303	219922303	+	Silent	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IKBKB	3551	broad.mit.edu	37	8	42146322	42146322	+	Intron	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IKZF1	10320	broad.mit.edu	37	7	50455154	50455154	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL17RA	23765	broad.mit.edu	37	22	17581332	17581332	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL17REL	400935	broad.mit.edu	37	22	50436080	50436080	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL17RE	132014	broad.mit.edu	37	3	9948315	9948315	+	Intron	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL18R1	8809	broad.mit.edu	37	2	103010927	103010927	+	Splice_Site	SNP	A	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1RL1	9173	broad.mit.edu	37	2	102954739	102954739	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL21R	50615	broad.mit.edu	37	16	27456476	27456476	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL27RA	9466	broad.mit.edu	37	19	14162620	14162620	+	Intron	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL2RG	3561	broad.mit.edu	37	X	70328051	70328051	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL31RA	133396	broad.mit.edu	37	5	55168222	55168222	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL32	9235	broad.mit.edu	37	16	3119200	3119200	+	Silent	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL32	9235	broad.mit.edu	37	16	3119312	3119312	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ILDR2	387597	broad.mit.edu	37	1	166904654	166904654	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ILK	3611	broad.mit.edu	37	11	6630604	6630604	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IMPG1	3617	broad.mit.edu	37	6	76744429	76744430	+	Missense_Mutation	DNP	CA	AC	AC			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IMPG2	50939	broad.mit.edu	37	3	100964923	100964923	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ING1	3621	broad.mit.edu	37	13	111367725	111367725	+	5'UTR	SNP	A	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ING1	3621	broad.mit.edu	37	13	111367733	111367734	+	5'UTR	DNP	GG	TT	TT			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ING5	84289	broad.mit.edu	37	2	242644014	242644014	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INPP5A	3632	broad.mit.edu	37	10	134594441	134594441	+	Intron	SNP	A	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INPP5D	3635	broad.mit.edu	37	2	233995472	233995472	+	Intron	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INSC	387755	broad.mit.edu	37	11	15212480	15212480	+	Intron	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INSC	387755	broad.mit.edu	37	11	15260691	15260691	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INTS6	26512	broad.mit.edu	37	13	51957561	51957561	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPO7	10527	broad.mit.edu	37	11	9450370	9450370	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPO8	10526	broad.mit.edu	37	12	30802261	30802261	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPO9	55705	broad.mit.edu	37	1	201832721	201832721	+	Silent	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRF1	3659	broad.mit.edu	37	5	131821541	131821542	+	Intron	INS	-	CACACACAC	CACACACAC	rs151015807	by1000genomes	TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA3	3675	broad.mit.edu	37	17	48153965	48153965	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA4	3676	broad.mit.edu	37	2	182346387	182346388	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA6	3655	broad.mit.edu	37	2	173344280	173344280	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA6	3655	broad.mit.edu	37	2	173349786	173349786	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA8	8516	broad.mit.edu	37	10	15617565	15617565	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA8	8516	broad.mit.edu	37	10	15714546	15714546	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA8	8516	broad.mit.edu	37	10	15730001	15730001	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAD	3681	broad.mit.edu	37	16	31421713	31421713	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAM	3684	broad.mit.edu	37	16	31277255	31277255	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAX	3687	broad.mit.edu	37	16	31392121	31392121	+	Intron	DEL	G	-	-			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGB3	3690	broad.mit.edu	37	17	45360745	45360745	+	Missense_Mutation	SNP	G	C	C	rs74554539		TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITIH1	3697	broad.mit.edu	37	3	52817001	52817001	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITM2A	9452	broad.mit.edu	37	X	78622739	78622739	+	5'UTR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITPR1	3708	broad.mit.edu	37	3	4706742	4706742	+	Intron	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IVD	3712	broad.mit.edu	37	15	40708319	40708319	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JAK3	3718	broad.mit.edu	37	19	17955064	17955064	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JAKMIP1	152789	broad.mit.edu	37	4	6066531	6066531	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JHDM1D	80853	broad.mit.edu	37	7	139827469	139827469	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KALRN	8997	broad.mit.edu	37	3	124282086	124282086	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KANK4	163782	broad.mit.edu	37	1	62739778	62739778	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNE1	3753	broad.mit.edu	37	21	35821667	35821667	+	Missense_Mutation	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH1	3756	broad.mit.edu	37	1	210857003	210857003	+	Missense_Mutation	SNP	C	T	T	rs148523415		TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNK10	54207	broad.mit.edu	37	14	88652099	88652099	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNK16	83795	broad.mit.edu	37	6	39285745	39285745	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNK18	338567	broad.mit.edu	37	10	118969762	118969762	+	Silent	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNQ1	3784	broad.mit.edu	37	11	2591810	2591810	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNQ1	3784	broad.mit.edu	37	11	2683345	2683345	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNQ1	3784	broad.mit.edu	37	11	2683347	2683347	+	Intron	SNP	A	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNQ2	3785	broad.mit.edu	37	20	62046273	62046273	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNQ2	3785	broad.mit.edu	37	20	62065167	62065167	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNQ2	3785	broad.mit.edu	37	20	62069894	62069894	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNQ5	56479	broad.mit.edu	37	6	73904317	73904317	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM3B	51780	broad.mit.edu	37	5	137726954	137726954	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM3B	51780	broad.mit.edu	37	5	137766189	137766189	+	Intron	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM4C	23081	broad.mit.edu	37	9	6893233	6893233	+	Splice_Site	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KEL	3792	broad.mit.edu	37	7	142638578	142638578	+	Intron	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KEL	3792	broad.mit.edu	37	7	142659377	142659377	+	5'UTR	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0146	23514	broad.mit.edu	37	8	48639868	48639868	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0247	9766	broad.mit.edu	37	14	70175482	70175482	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0368	23392	broad.mit.edu	37	9	114156454	114156454	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0368	23392	broad.mit.edu	37	9	114176853	114176853	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0415	9907	broad.mit.edu	37	7	4826038	4826038	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0748	9840	broad.mit.edu	37	12	55357527	55357527	+	Silent	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0947	23379	broad.mit.edu	37	5	5460556	5460556	+	Missense_Mutation	SNP	A	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0947	23379	broad.mit.edu	37	5	5464516	5464516	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1009	22832	broad.mit.edu	37	6	84872831	84872831	+	Intron	SNP	T	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1109	84162	broad.mit.edu	37	4	123192197	123192197	+	Silent	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1109	84162	broad.mit.edu	37	4	123207825	123207825	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1267	284058	broad.mit.edu	37	17	44159803	44159803	+	Intron	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1377	57562	broad.mit.edu	37	11	101828831	101828831	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1377	57562	broad.mit.edu	37	11	101832914	101832914	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1409	57578	broad.mit.edu	37	14	94069601	94069601	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1409	57578	broad.mit.edu	37	14	94088826	94088826	+	Silent	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1409	57578	broad.mit.edu	37	14	94113051	94113051	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1632	57724	broad.mit.edu	37	18	43497819	43497819	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1755	85449	broad.mit.edu	37	20	36854137	36854137	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA2018	205717	broad.mit.edu	37	3	113377384	113377384	+	Nonsense_Mutation	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA2018	205717	broad.mit.edu	37	3	113378844	113378844	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF13A	63971	broad.mit.edu	37	6	17764658	17764658	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF1A	547	broad.mit.edu	37	2	241659303	241659303	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF4A	24137	broad.mit.edu	37	X	69521723	69521723	+	Intron	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF4B	285643	broad.mit.edu	37	5	154396417	154396417	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIR3DL1	3811	broad.mit.edu	37	19	55329796	55329796	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLF10	7071	broad.mit.edu	37	8	103664175	103664175	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLF17	128209	broad.mit.edu	37	1	44588065	44588065	+	Intron	DEL	A	-	-			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHDC10	23008	broad.mit.edu	37	7	129770576	129770576	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL10	317719	broad.mit.edu	37	17	39998215	39998215	+	Missense_Mutation	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL14	57565	broad.mit.edu	37	18	30254777	30254777	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL17	339451	broad.mit.edu	37	1	899186	899186	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL1	57626	broad.mit.edu	37	13	70514351	70514351	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL1	57626	broad.mit.edu	37	13	70681381	70681381	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL24	54800	broad.mit.edu	37	3	183382992	183382992	+	Intron	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL5	51088	broad.mit.edu	37	4	39109334	39109334	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLK15	55554	broad.mit.edu	37	19	51329777	51329777	+	Intron	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLK4	9622	broad.mit.edu	37	19	51412000	51412000	+	Silent	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLKB1	3818	broad.mit.edu	37	4	187178397	187178397	+	Silent	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLRAQ1	129285	broad.mit.edu	37	2	48722704	48722704	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLRG2	346689	broad.mit.edu	37	7	139164247	139164247	+	Intron	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KNG1	3827	broad.mit.edu	37	3	186456894	186456894	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT35	3886	broad.mit.edu	37	17	39633777	39633778	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT72	140807	broad.mit.edu	37	12	52994912	52994912	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT78	196374	broad.mit.edu	37	12	53232851	53232851	+	3'UTR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT79	338785	broad.mit.edu	37	12	53217606	53217606	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT8	3856	broad.mit.edu	37	12	53342823	53342823	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP19-7	337974	broad.mit.edu	37	21	31933529	31933529	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP24-1	643803	broad.mit.edu	37	21	31654874	31654874	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP5-3	387266	broad.mit.edu	37	11	1629527	1629527	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP9-2	83899	broad.mit.edu	37	17	39383032	39383032	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP9-4	85280	broad.mit.edu	37	17	39406098	39406098	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KSR2	283455	broad.mit.edu	37	12	118020257	118020257	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
L1CAM	3897	broad.mit.edu	37	X	153135306	153135306	+	Missense_Mutation	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAG3	3902	broad.mit.edu	37	12	6886278	6886278	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA2	3908	broad.mit.edu	37	6	129250534	129250534	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA2	3908	broad.mit.edu	37	6	129511486	129511486	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA4	3910	broad.mit.edu	37	6	112463543	112463543	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMB4	22798	broad.mit.edu	37	7	107708405	107708405	+	Intron	SNP	T	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMB4	22798	broad.mit.edu	37	7	107720070	107720070	+	Silent	SNP	G	T	T	rs145534341	byFrequency;by1000genomes	TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMC1	3915	broad.mit.edu	37	1	183096318	183096318	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMC3	10319	broad.mit.edu	37	9	133951287	133951287	+	Silent	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LARP4B	23185	broad.mit.edu	37	10	860865	860865	+	Intron	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LARS2	23395	broad.mit.edu	37	3	45530212	45530212	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LATS2	26524	broad.mit.edu	37	13	21549522	21549522	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LBP	3929	broad.mit.edu	37	20	36983646	36983646	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCE2C	353140	broad.mit.edu	37	1	152648428	152648429	+	Intron	DNP	CC	AA	AA			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCN15	389812	broad.mit.edu	37	9	139658873	139658873	+	Missense_Mutation	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCTL	197021	broad.mit.edu	37	15	66855910	66855911	+	Missense_Mutation	DNP	GG	AT	AT			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCT	3938	broad.mit.edu	37	2	136555732	136555732	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCT	3938	broad.mit.edu	37	2	136565894	136565894	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LDLR	3949	broad.mit.edu	37	19	11210879	11210879	+	Intron	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEF1	51176	broad.mit.edu	37	4	109004522	109004522	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEPRE1	64175	broad.mit.edu	37	1	43232495	43232495	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEPR	3953	broad.mit.edu	37	1	66088664	66088664	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LFNG	3955	broad.mit.edu	37	7	2566918	2566918	+	3'UTR	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGI1	9211	broad.mit.edu	37	10	95556853	95556853	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGI1	9211	broad.mit.edu	37	10	95557293	95557293	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGR5	8549	broad.mit.edu	37	12	71946859	71946859	+	Silent	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LHX1	3975	broad.mit.edu	37	17	35300290	35300290	+	Silent	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LHX4	89884	broad.mit.edu	37	1	180241153	180241153	+	Intron	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIFR	3977	broad.mit.edu	37	5	38496683	38496683	+	Silent	SNP	A	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIG1	3978	broad.mit.edu	37	19	48664733	48664733	+	Missense_Mutation	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRB4	11006	broad.mit.edu	37	19	55175136	55175136	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIMCH1	22998	broad.mit.edu	37	4	41615532	41615532	+	Missense_Mutation	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIMD2	80774	broad.mit.edu	37	17	61776059	61776059	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIN9	286826	broad.mit.edu	37	1	226475278	226475278	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIX1	167410	broad.mit.edu	37	5	96478146	96478146	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMBRD2	92255	broad.mit.edu	37	5	36117773	36117773	+	Intron	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMX1A	4009	broad.mit.edu	37	1	165218611	165218611	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LNX2	222484	broad.mit.edu	37	13	28155856	28155856	+	5'UTR	SNP	T	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC100124692	100124692	broad.mit.edu	37	7	141896625	141896625	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC100133308	100133308	broad.mit.edu	37	10	45625383	45625383	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC200030	200030	broad.mit.edu	37	1	148193785	148193785	+	Intron	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC220429	220429	broad.mit.edu	37	13	50465823	50465823	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC285359	285359	broad.mit.edu	37	3	101431342	101431342	+	RNA	SNP	G	T	T	rs2317940		TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC338651	338651	broad.mit.edu	37	11	1619013	1619013	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC387646	387646	broad.mit.edu	37	10	27536480	27536480	+	3'UTR	SNP	A	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC642846	642846	broad.mit.edu	37	12	9464356	9464356	+	Intron	SNP	A	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC643955	643955	broad.mit.edu	37	7	62758810	62758810	+	Intron	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC645752	645752	broad.mit.edu	37	15	78213669	78213669	+	Intron	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC650368	650368	broad.mit.edu	37	11	3424906	3424906	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC651250	651250	broad.mit.edu	37	17	66122957	66122957	+	RNA	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC729375	729375	broad.mit.edu	37	3	129821485	129821485	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC96610	96610	broad.mit.edu	37	22	22664611	22664611	+	RNA	SNP	T	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPO	4025	broad.mit.edu	37	17	56329887	56329887	+	Intron	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRFN5	145581	broad.mit.edu	37	14	42356854	42356854	+	Silent	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141004668	141004668	+	Missense_Mutation	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141092139	141092139	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141110678	141110678	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141128181	141128181	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141135813	141135813	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141143663	141143663	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141283458	141283458	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141441363	141441363	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141458260	141458260	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141459545	141459545	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	142004857	142004857	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1	4035	broad.mit.edu	37	12	57589477	57589478	+	Missense_Mutation	DNP	GC	TG	TG			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP2	4036	broad.mit.edu	37	2	170131704	170131704	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC1	55227	broad.mit.edu	37	6	53747624	53747624	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC31	79782	broad.mit.edu	37	3	169572827	169572827	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC32	2615	broad.mit.edu	37	11	76370954	76370954	+	Silent	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC4C	57689	broad.mit.edu	37	11	40137638	40137638	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC7	57554	broad.mit.edu	37	1	70226092	70226092	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC7	57554	broad.mit.edu	37	1	70504169	70504169	+	Missense_Mutation	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC7	57554	broad.mit.edu	37	1	70541828	70541828	+	Silent	SNP	G	A	A	rs147035395	byFrequency	TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC8D	55144	broad.mit.edu	37	1	90399621	90399621	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRFIP1	9208	broad.mit.edu	37	2	238657973	238657973	+	Intron	SNP	A	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRTM1	347730	broad.mit.edu	37	2	80530092	80530092	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LUZP6	767558	broad.mit.edu	37	7	135614761	135614761	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LY75	4065	broad.mit.edu	37	2	160692035	160692035	+	Missense_Mutation	SNP	T	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LY75	4065	broad.mit.edu	37	2	160697206	160697206	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LY9	4063	broad.mit.edu	37	1	160793746	160793746	+	Intron	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYST	1130	broad.mit.edu	37	1	235878603	235878603	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYST	1130	broad.mit.edu	37	1	235879978	235879978	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MADD	8567	broad.mit.edu	37	11	47317027	47317027	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEC2	51438	broad.mit.edu	37	X	141291520	141291520	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEC3	139081	broad.mit.edu	37	X	140984513	140984513	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGI2	9863	broad.mit.edu	37	7	78131078	78131078	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAML3	55534	broad.mit.edu	37	4	140809599	140809599	+	Intron	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAN2B1	4125	broad.mit.edu	37	19	12774458	12774458	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MANBA	4126	broad.mit.edu	37	4	103673139	103673139	+	Intron	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K12	7786	broad.mit.edu	37	12	53876886	53876886	+	Silent	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPK10	5602	broad.mit.edu	37	4	87022299	87022299	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPK6	5597	broad.mit.edu	37	15	52339291	52339291	+	Intron	SNP	A	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPT	4137	broad.mit.edu	37	17	44077080	44077080	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCH4	57574	broad.mit.edu	37	2	217124302	217124302	+	Silent	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCH6	10299	broad.mit.edu	37	5	10403613	10403613	+	Missense_Mutation	SNP	A	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCO	8685	broad.mit.edu	37	2	119699919	119699919	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCO	8685	broad.mit.edu	37	2	119739336	119739336	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAS1L	116511	broad.mit.edu	37	6	29454605	29454605	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAST4	375449	broad.mit.edu	37	5	66460973	66460973	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MBD5	55777	broad.mit.edu	37	2	149227675	149227675	+	Silent	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MBNL1	4154	broad.mit.edu	37	3	152174031	152174031	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCF2L2	23101	broad.mit.edu	37	3	183056751	183056751	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCF2L	23263	broad.mit.edu	37	13	113719441	113719441	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCM3AP	8888	broad.mit.edu	37	21	47692686	47692686	+	Missense_Mutation	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCRS1	10445	broad.mit.edu	37	12	49959210	49959210	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCRS1	10445	broad.mit.edu	37	12	49959212	49959212	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDC1	9656	broad.mit.edu	37	6	30675547	30675547	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDFIC	29969	broad.mit.edu	37	7	114619570	114619570	+	Missense_Mutation	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDH1B	130752	broad.mit.edu	37	2	207622051	207622051	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED13L	23389	broad.mit.edu	37	12	116434322	116434322	+	Silent	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED6	10001	broad.mit.edu	37	14	71058048	71058048	+	Nonsense_Mutation	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEGF8	1954	broad.mit.edu	37	19	42841425	42841434	+	Intron	DEL	CTCAAGCCAC	-	-			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEGF8	1954	broad.mit.edu	37	19	42863308	42863309	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEGF8	1954	broad.mit.edu	37	19	42880607	42880607	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEP1A	4224	broad.mit.edu	37	6	46803277	46803277	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
METT10D	79066	broad.mit.edu	37	17	2405749	2405749	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEX3B	84206	broad.mit.edu	37	15	82336558	82336558	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MFAP5	8076	broad.mit.edu	37	12	8802174	8802174	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MFSD11	79157	broad.mit.edu	37	17	74738050	74738050	+	Splice_Site	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MFSD2A	84879	broad.mit.edu	37	1	40428901	40428901	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAM	8972	broad.mit.edu	37	7	141750754	141750754	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAT4A	11320	broad.mit.edu	37	2	99252887	99252887	+	Intron	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAT5B	146664	broad.mit.edu	37	17	74944851	74944851	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIB2	142678	broad.mit.edu	37	1	1560537	1560537	+	Silent	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIPEP	4285	broad.mit.edu	37	13	24449106	24449106	+	Intron	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR204	406987	broad.mit.edu	37	9	73424894	73424894	+	RNA	SNP	A	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR29B2	407025	broad.mit.edu	37	1	207975855	207975856	+	RNA	DNP	CC	AA	AA			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR525	574470	broad.mit.edu	37	19	54200784	54200784	+	5'Flank	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR526B	574468	broad.mit.edu	37	19	54197543	54197543	+	5'Flank	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLH1	4292	broad.mit.edu	37	3	37042530	37042530	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL4	9757	broad.mit.edu	37	19	36220024	36220024	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLLT10	8028	broad.mit.edu	37	10	21962656	21962656	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLXIPL	51085	broad.mit.edu	37	7	73013712	73013712	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP16	4325	broad.mit.edu	37	8	89128873	89128873	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP26	56547	broad.mit.edu	37	11	5011951	5011951	+	Silent	SNP	C	T	T	rs144183012		TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP2	4313	broad.mit.edu	37	16	55530894	55530894	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOSC2	54996	broad.mit.edu	37	1	220936224	220936224	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPP6	51678	broad.mit.edu	37	7	24705683	24705683	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRGPRF	116535	broad.mit.edu	37	11	68773766	68773766	+	Intron	DEL	C	-	-			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MS4A14	84689	broad.mit.edu	37	11	60184275	60184275	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MS4A6A	64231	broad.mit.edu	37	11	59943065	59943065	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MS4A8B	83661	broad.mit.edu	37	11	60476073	60476073	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MST1R	4486	broad.mit.edu	37	3	49936282	49936282	+	Intron	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSX1	4487	broad.mit.edu	37	4	4864420	4864420	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTHFR	4524	broad.mit.edu	37	1	11852386	11852386	+	Silent	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR6	9107	broad.mit.edu	37	13	25826203	25826203	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTRR	4552	broad.mit.edu	37	5	7886659	7886659	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTR	4548	broad.mit.edu	37	1	237023177	237023177	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTUS2	23281	broad.mit.edu	37	13	29599270	29599270	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9011134	9011134	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9049809	9049809	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9056073	9056073	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9061051	9061051	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9064316	9064316	+	Silent	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9064968	9064968	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9071983	9071983	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9084426	9084426	+	Silent	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC17	140453	broad.mit.edu	37	7	100677490	100677490	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC5B	727897	broad.mit.edu	37	11	1271501	1271501	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC5B	727897	broad.mit.edu	37	11	1281295	1281295	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MXRA5	25878	broad.mit.edu	37	X	3229472	3229472	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MXRA5	25878	broad.mit.edu	37	X	3261795	3261795	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYBPC1	4604	broad.mit.edu	37	12	102076361	102076361	+	Intron	SNP	A	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYBPH	4608	broad.mit.edu	37	1	203144911	203144911	+	5'UTR	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH11	4629	broad.mit.edu	37	16	15831439	15831439	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH11	4629	broad.mit.edu	37	16	15838948	15838948	+	Intron	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH13	8735	broad.mit.edu	37	17	10219042	10219042	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH2	4620	broad.mit.edu	37	17	10435343	10435343	+	Intron	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH4	4622	broad.mit.edu	37	17	10351909	10351925	+	Intron	DEL	GAAATAGAATGATTACA	-	-			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH6	4624	broad.mit.edu	37	14	23859650	23859650	+	Silent	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH6	4624	broad.mit.edu	37	14	23869813	23869813	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH6	4624	broad.mit.edu	37	14	23873428	23873428	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH6	4624	broad.mit.edu	37	14	23874763	23874763	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH7B	57644	broad.mit.edu	37	20	33575201	33575201	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH8	4626	broad.mit.edu	37	17	10303891	10303891	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH9	4627	broad.mit.edu	37	22	36737396	36737396	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYL12B	103910	broad.mit.edu	37	18	3273177	3273177	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO18B	84700	broad.mit.edu	37	22	26400821	26400821	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO1A	4640	broad.mit.edu	37	12	57432685	57432685	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO3A	53904	broad.mit.edu	37	10	26434347	26434347	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO7A	4647	broad.mit.edu	37	11	76872033	76872033	+	Silent	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO7A	4647	broad.mit.edu	37	11	76910853	76910853	+	Silent	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO7A	4647	broad.mit.edu	37	11	76912698	76912699	+	Intron	DNP	GG	TT	TT			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOCD	93649	broad.mit.edu	37	17	12649219	12649219	+	Intron	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOCD	93649	broad.mit.edu	37	17	12656507	12656507	+	Silent	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOD1	4654	broad.mit.edu	37	11	17743008	17743008	+	Nonsense_Mutation	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOG	4656	broad.mit.edu	37	1	203055095	203055095	+	5'UTR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOM2	9172	broad.mit.edu	37	8	2054354	2054354	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYT1L	23040	broad.mit.edu	37	2	1855465	1855465	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYT1L	23040	broad.mit.edu	37	2	1926244	1926244	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAGPA	51172	broad.mit.edu	37	16	5081741	5081741	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAIP	4671	broad.mit.edu	37	5	70308462	70308462	+	Missense_Mutation	SNP	C	G	G	rs147757754		TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NALCN	259232	broad.mit.edu	37	13	101714425	101714425	+	Silent	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NALCN	259232	broad.mit.edu	37	13	101747881	101747881	+	Intron	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAP1L3	4675	broad.mit.edu	37	X	92928086	92928086	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAP1L3	4675	broad.mit.edu	37	X	92928088	92928088	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAPB	63908	broad.mit.edu	37	20	23360135	23360135	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV2	89797	broad.mit.edu	37	11	19955082	19955082	+	Missense_Mutation	SNP	A	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV3	89795	broad.mit.edu	37	12	78444860	78444860	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF1	55672	broad.mit.edu	37	1	16892443	16892443	+	Intron	SNP	A	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF22P	285622	broad.mit.edu	37	5	85582777	85582777	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF9	400818	broad.mit.edu	37	1	144814933	144814933	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF9	400818	broad.mit.edu	37	1	144828425	144828425	+	Intron	SNP	A	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCAM1	4684	broad.mit.edu	37	11	113105826	113105826	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCAN	1463	broad.mit.edu	37	19	19337642	19337642	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCKAP1L	3071	broad.mit.edu	37	12	54930672	54930672	+	Intron	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCKAP1	10787	broad.mit.edu	37	2	183832073	183832073	+	Nonsense_Mutation	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCKAP1	10787	broad.mit.edu	37	2	183888673	183888673	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCOA2	10499	broad.mit.edu	37	8	71185832	71185832	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCOA3	8202	broad.mit.edu	37	20	46256793	46256793	+	Intron	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCR2	9436	broad.mit.edu	37	6	41309566	41309566	+	Silent	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCRNA00189	193629	broad.mit.edu	37	21	30595180	30595180	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCRNA00207	388910	broad.mit.edu	37	22	44963281	44963281	+	5'Flank	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDST3	9348	broad.mit.edu	37	4	119064718	119064718	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDUFAF4	29078	broad.mit.edu	37	6	97338990	97338990	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEBL	10529	broad.mit.edu	37	10	21318564	21318564	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEDD4	4734	broad.mit.edu	37	15	56132986	56132986	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEDD8	4738	broad.mit.edu	37	14	24701538	24701538	+	5'UTR	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEK1	4750	broad.mit.edu	37	4	170498205	170498205	+	Silent	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NELF	26012	broad.mit.edu	37	9	140347452	140347452	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NELL2	4753	broad.mit.edu	37	12	45209815	45209815	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NETO1	81832	broad.mit.edu	37	18	70451059	70451059	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NF1	4763	broad.mit.edu	37	17	29557278	29557278	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFAM1	150372	broad.mit.edu	37	22	42782978	42782978	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFASC	23114	broad.mit.edu	37	1	204978640	204978640	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFATC4	4776	broad.mit.edu	37	14	24845994	24845994	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFKBID	84807	broad.mit.edu	37	19	36387226	36387226	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFX1	4799	broad.mit.edu	37	9	33311228	33311228	+	Intron	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NHEDC1	150159	broad.mit.edu	37	4	103822425	103822425	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NIPAL2	79815	broad.mit.edu	37	8	99208109	99208109	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NIPAL4	348938	broad.mit.edu	37	5	156895765	156895765	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLGN1	22871	broad.mit.edu	37	3	173996901	173996901	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRC5	84166	broad.mit.edu	37	16	57085289	57085289	+	Intron	SNP	C	T	T	rs116230020	by1000genomes	TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRC5	84166	broad.mit.edu	37	16	57100529	57100529	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP10	338322	broad.mit.edu	37	11	7982253	7982253	+	Silent	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP10	338322	broad.mit.edu	37	11	7982257	7982257	+	Missense_Mutation	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP10	338322	broad.mit.edu	37	11	7982963	7982963	+	Intron	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP10	338322	broad.mit.edu	37	11	7984715	7984715	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP12	91662	broad.mit.edu	37	19	54304410	54304410	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP2	55655	broad.mit.edu	37	19	55501843	55501843	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP3	114548	broad.mit.edu	37	1	247607998	247607998	+	Silent	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP7	199713	broad.mit.edu	37	19	55450980	55450980	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRX1	79671	broad.mit.edu	37	11	119044711	119044711	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRX1	79671	broad.mit.edu	37	11	119045171	119045171	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOBOX	135935	broad.mit.edu	37	7	144101631	144101631	+	Intron	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOBOX	135935	broad.mit.edu	37	7	144101933	144101933	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOMO3	408050	broad.mit.edu	37	16	16364154	16364154	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOS3	4846	broad.mit.edu	37	7	150699246	150699246	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOTCH2	4853	broad.mit.edu	37	1	120471800	120471800	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOTCH4	4855	broad.mit.edu	37	6	32164759	32164759	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPHP3	27031	broad.mit.edu	37	3	132422939	132422939	+	Intron	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPHP4	261734	broad.mit.edu	37	1	6027358	6027358	+	Splice_Site	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPNT	255743	broad.mit.edu	37	4	106863837	106863837	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPR3	4883	broad.mit.edu	37	5	32781025	32781025	+	Intron	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR1I2	8856	broad.mit.edu	37	3	119526124	119526124	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR1I3	9970	broad.mit.edu	37	1	161202960	161202960	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR5A1	2516	broad.mit.edu	37	9	127263080	127263080	+	Intron	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR5A2	2494	broad.mit.edu	37	1	200008740	200008740	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR5A2	2494	broad.mit.edu	37	1	200018042	200018042	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRAP	4892	broad.mit.edu	37	10	115405652	115405652	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRAP	4892	broad.mit.edu	37	10	115423132	115423132	+	Missense_Mutation	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRCAM	4897	broad.mit.edu	37	7	107864184	107864184	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRCAM	4897	broad.mit.edu	37	7	107875139	107875139	+	Intron	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRCAM	4897	broad.mit.edu	37	7	107878202	107878202	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRG1	3084	broad.mit.edu	37	8	32505910	32505911	+	Intron	DEL	AG	-	-			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRP2	8828	broad.mit.edu	37	2	206610595	206610595	+	Silent	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN1	9378	broad.mit.edu	37	2	51255054	51255054	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSF	4905	broad.mit.edu	37	17	44788372	44788372	+	Missense_Mutation	SNP	A	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSUN2	54888	broad.mit.edu	37	5	6604197	6604197	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NT5DC3	51559	broad.mit.edu	37	12	104171766	104171766	+	Silent	SNP	G	A	A	rs150307975		TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTNG1	22854	broad.mit.edu	37	1	107937801	107937801	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTNG1	22854	broad.mit.edu	37	1	107979473	107979473	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTNG2	84628	broad.mit.edu	37	9	135042221	135042221	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTRK3	4916	broad.mit.edu	37	15	88476269	88476269	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTSR1	4923	broad.mit.edu	37	20	61340789	61340789	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUDCD1	84955	broad.mit.edu	37	8	110255375	110255375	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUDCD1	84955	broad.mit.edu	37	8	110305674	110305674	+	Missense_Mutation	SNP	A	T	T	rs75876794	byFrequency;by1000genomes	TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUDT12	83594	broad.mit.edu	37	5	102886481	102886481	+	3'UTR	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP205	23165	broad.mit.edu	37	7	135263687	135263687	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP85	79902	broad.mit.edu	37	17	73227579	73227579	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NWD1	284434	broad.mit.edu	37	19	16910888	16910888	+	Silent	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF2B	728343	broad.mit.edu	37	X	101623784	101623784	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF3	56000	broad.mit.edu	37	X	102333478	102333479	+	Intron	DNP	CA	TT	TT			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF3	56000	broad.mit.edu	37	X	102337630	102337630	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXN	64359	broad.mit.edu	37	17	729321	729321	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXPH1	30010	broad.mit.edu	37	7	8790617	8790617	+	Intron	SNP	A	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OBSCN	84033	broad.mit.edu	37	1	228548050	228548050	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OBSL1	23363	broad.mit.edu	37	2	220421267	220421267	+	Silent	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OBSL1	23363	broad.mit.edu	37	2	220424002	220424002	+	Silent	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OCA2	4948	broad.mit.edu	37	15	28200122	28200122	+	Intron	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OCM2	4951	broad.mit.edu	37	7	97619369	97619369	+	Silent	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ1	10178	broad.mit.edu	37	X	123516528	123516528	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ1	10178	broad.mit.edu	37	X	123538827	123538827	+	Intron	SNP	A	T	T	rs72264611		TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ3	55714	broad.mit.edu	37	4	183664579	183664579	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OLFM4	10562	broad.mit.edu	37	13	53624276	53624276	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OLIG3	167826	broad.mit.edu	37	6	137815335	137815335	+	5'UTR	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OMA1	115209	broad.mit.edu	37	1	58996336	58996336	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPN1MW	2652	broad.mit.edu	37	X	153496323	153496323	+	Intron	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPN4	94233	broad.mit.edu	37	10	88414741	88414741	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPN5	221391	broad.mit.edu	37	6	47754378	47754378	+	Intron	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPRM1	4988	broad.mit.edu	37	6	154411019	154411019	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPTN	10133	broad.mit.edu	37	10	13175538	13175538	+	Silent	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10H5	284433	broad.mit.edu	37	19	15904977	15904977	+	Missense_Mutation	SNP	T	G	G	rs61741282		TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10J3	441911	broad.mit.edu	37	1	159284112	159284112	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10K1	391109	broad.mit.edu	37	1	158435417	158435417	+	Silent	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10K1	391109	broad.mit.edu	37	1	158436249	158436249	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10R2	343406	broad.mit.edu	37	1	158450094	158450094	+	Missense_Mutation	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10Z1	128368	broad.mit.edu	37	1	158576803	158576803	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR11L1	391189	broad.mit.edu	37	1	248004595	248004595	+	Missense_Mutation	SNP	G	T	T	rs144505770		TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR11L1	391189	broad.mit.edu	37	1	248005254	248005254	+	5'Flank	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR14A16	284532	broad.mit.edu	37	1	247978262	247978262	+	Missense_Mutation	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1C1	26188	broad.mit.edu	37	1	247921086	247921086	+	Missense_Mutation	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1C1	26188	broad.mit.edu	37	1	247921090	247921090	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1S2	219958	broad.mit.edu	37	11	57971092	57971092	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2A2	442361	broad.mit.edu	37	7	143807534	143807534	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2A7	401427	broad.mit.edu	37	7	143973632	143973632	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2B3	442184	broad.mit.edu	37	6	29054813	29054813	+	Silent	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2F2	135948	broad.mit.edu	37	7	143632387	143632387	+	Nonsense_Mutation	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2G2	81470	broad.mit.edu	37	1	247751604	247751604	+	5'Flank	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2G2	81470	broad.mit.edu	37	1	247751945	247751945	+	Missense_Mutation	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2G3	81469	broad.mit.edu	37	1	247769736	247769736	+	Silent	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2G6	391211	broad.mit.edu	37	1	248685011	248685011	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L13	284521	broad.mit.edu	37	1	248247088	248247088	+	Intron	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L13	284521	broad.mit.edu	37	1	248247669	248247669	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L13	284521	broad.mit.edu	37	1	248263401	248263401	+	Missense_Mutation	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L1P	26247	broad.mit.edu	37	1	248154255	248154255	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L8	391190	broad.mit.edu	37	1	248112518	248112518	+	Missense_Mutation	SNP	A	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2M2	391194	broad.mit.edu	37	1	248343721	248343721	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T12	127064	broad.mit.edu	37	1	248458403	248458403	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T12	127064	broad.mit.edu	37	1	248458652	248458652	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T12	127064	broad.mit.edu	37	1	248458805	248458805	+	Missense_Mutation	SNP	A	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T33	391195	broad.mit.edu	37	1	248437219	248437219	+	5'Flank	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T33	391195	broad.mit.edu	37	1	248437230	248437230	+	5'Flank	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2W3	343171	broad.mit.edu	37	1	248059604	248059604	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2Z1	284383	broad.mit.edu	37	19	8842204	8842204	+	Missense_Mutation	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4A47	403253	broad.mit.edu	37	11	48510594	48510594	+	Missense_Mutation	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4C13	283092	broad.mit.edu	37	11	49974729	49974729	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4C6	219432	broad.mit.edu	37	11	55432961	55432961	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4D6	219983	broad.mit.edu	37	11	59225307	59225307	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4K1	79544	broad.mit.edu	37	14	20404138	20404138	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4K1	79544	broad.mit.edu	37	14	20404584	20404584	+	Frame_Shift_Del	DEL	T	-	-			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4L1	122742	broad.mit.edu	37	14	20528475	20528475	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4N3P	390539	broad.mit.edu	37	15	22413884	22413884	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51A7	119687	broad.mit.edu	37	11	4929530	4929530	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51G1	79324	broad.mit.edu	37	11	4945394	4945394	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51I1	390063	broad.mit.edu	37	11	5462385	5462385	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51S1	119692	broad.mit.edu	37	11	4869647	4869647	+	Silent	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51V1	283111	broad.mit.edu	37	11	5221709	5221709	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52A4	390053	broad.mit.edu	37	11	5142299	5142299	+	Missense_Mutation	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52A4	390053	broad.mit.edu	37	11	5142639	5142639	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52J3	119679	broad.mit.edu	37	11	5068575	5068575	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52N5	390075	broad.mit.edu	37	11	5799305	5799305	+	Missense_Mutation	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52N5	390075	broad.mit.edu	37	11	5799752	5799752	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5AK2	390181	broad.mit.edu	37	11	56756596	56756596	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5AN1	390195	broad.mit.edu	37	11	59132758	59132758	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5AS1	219447	broad.mit.edu	37	11	55798170	55798170	+	Silent	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5J2	282775	broad.mit.edu	37	11	55944578	55944578	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5K3	403277	broad.mit.edu	37	3	98109949	98109949	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5M10	390167	broad.mit.edu	37	11	56344738	56344738	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5M9	390162	broad.mit.edu	37	11	56230095	56230096	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6F1	343169	broad.mit.edu	37	1	247875180	247875180	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6K2	81448	broad.mit.edu	37	1	158670322	158670322	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6K2	81448	broad.mit.edu	37	1	158670443	158670443	+	5'Flank	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6K6	128371	broad.mit.edu	37	1	158724612	158724612	+	Nonsense_Mutation	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8H1	219469	broad.mit.edu	37	11	56058584	56058584	+	5'Flank	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8H3	390152	broad.mit.edu	37	11	55890270	55890270	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR9G9	504191	broad.mit.edu	37	11	56468589	56468589	+	Silent	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL3	26031	broad.mit.edu	37	7	24870631	24870631	+	Intron	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL8	114882	broad.mit.edu	37	12	76752583	76752583	+	Silent	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL9	114883	broad.mit.edu	37	1	52226377	52226377	+	Missense_Mutation	SNP	G	C	C	rs61733665		TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL9	114883	broad.mit.edu	37	1	52248146	52248146	+	Intron	SNP	C	T	T	rs140508114	by1000genomes	TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTOA	146183	broad.mit.edu	37	16	21692968	21692968	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTOP2	92736	broad.mit.edu	37	17	72921499	72921499	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OVCH1	341350	broad.mit.edu	37	12	29617594	29617594	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OVCH1	341350	broad.mit.edu	37	12	29630545	29630545	+	Intron	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OVCH1	341350	broad.mit.edu	37	12	29648245	29648245	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PADI4	23569	broad.mit.edu	37	1	17668370	17668370	+	Intron	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPLN	89932	broad.mit.edu	37	14	73719886	73719886	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAR4	347745	broad.mit.edu	37	15	25448624	25448624	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PASD1	139135	broad.mit.edu	37	X	150842674	150842674	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAX1	5075	broad.mit.edu	37	20	21687445	21687445	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAX1	5075	broad.mit.edu	37	20	21689833	21689833	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAX3	5077	broad.mit.edu	37	2	223160154	223160154	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAX5	5079	broad.mit.edu	37	9	36966699	36966699	+	Silent	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAX7	5081	broad.mit.edu	37	1	19018403	19018403	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH10	57575	broad.mit.edu	37	4	134084189	134084189	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH11X	27328	broad.mit.edu	37	X	91134030	91134030	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH11X	27328	broad.mit.edu	37	X	91238367	91238368	+	Intron	DNP	TG	CT	CT			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH15	65217	broad.mit.edu	37	10	55588211	55588211	+	Intron	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH18	54510	broad.mit.edu	37	4	138453099	138453099	+	Silent	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH19	57526	broad.mit.edu	37	X	99551693	99551693	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH7	5099	broad.mit.edu	37	4	30724540	30724540	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA12	56137	broad.mit.edu	37	5	140255544	140255544	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA12	56137	broad.mit.edu	37	5	140256217	140256217	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA6	56142	broad.mit.edu	37	5	140209546	140209546	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB12	56124	broad.mit.edu	37	5	140590444	140590444	+	Silent	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB12	56124	broad.mit.edu	37	5	140590632	140590632	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB13	56123	broad.mit.edu	37	5	140595759	140595759	+	Silent	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB15	56121	broad.mit.edu	37	5	140627002	140627002	+	Missense_Mutation	SNP	C	A	A	rs17844634		TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB16	57717	broad.mit.edu	37	5	140563749	140563749	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB3	56132	broad.mit.edu	37	5	140481294	140481294	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB3	56132	broad.mit.edu	37	5	140481566	140481566	+	Missense_Mutation	SNP	A	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB3	56132	broad.mit.edu	37	5	140481802	140481802	+	Silent	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB5	26167	broad.mit.edu	37	5	140516349	140516349	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA11	56105	broad.mit.edu	37	5	140801578	140801579	+	Frame_Shift_Ins	INS	-	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA12	26025	broad.mit.edu	37	5	140812312	140812312	+	Silent	SNP	G	T	T	rs138883931	byFrequency	TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA1	56114	broad.mit.edu	37	5	140710390	140710390	+	Missense_Mutation	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA4	56111	broad.mit.edu	37	5	140735713	140735713	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA5	56110	broad.mit.edu	37	5	140745823	140745823	+	Silent	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCLO	27445	broad.mit.edu	37	7	82580055	82580055	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDCD11	22984	broad.mit.edu	37	10	105165712	105165712	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDCD1LG2	80380	broad.mit.edu	37	9	5534754	5534754	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE10A	10846	broad.mit.edu	37	6	165863740	165863740	+	Silent	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE1C	5137	broad.mit.edu	37	7	31862793	31862794	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE3A	5139	broad.mit.edu	37	12	20786566	20786566	+	Intron	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4B	5142	broad.mit.edu	37	1	66384213	66384213	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144864138	144864138	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE6A	5145	broad.mit.edu	37	5	149283305	149283305	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE6B	5158	broad.mit.edu	37	4	660499	660499	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE6D	5147	broad.mit.edu	37	2	232603771	232603771	+	Intron	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDGFD	80310	broad.mit.edu	37	11	103814331	103814331	+	Silent	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDGFRA	5156	broad.mit.edu	37	4	55087415	55087415	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDGFRB	5159	broad.mit.edu	37	5	149514257	149514257	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZD2	23037	broad.mit.edu	37	5	32059401	32059401	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZD2	23037	broad.mit.edu	37	5	32077526	32077526	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZRN3	23024	broad.mit.edu	37	3	73433919	73433919	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZRN4	29951	broad.mit.edu	37	12	41900598	41900598	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEX5L	51555	broad.mit.edu	37	3	179597701	179597701	+	Intron	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PFAS	5198	broad.mit.edu	37	17	8159986	8159986	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGAP2	27315	broad.mit.edu	37	11	3844950	3844950	+	Intron	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGGT1B	5229	broad.mit.edu	37	5	114598499	114598499	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGLYRP2	114770	broad.mit.edu	37	19	15580732	15580732	+	Missense_Mutation	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGM5	5239	broad.mit.edu	37	9	71006561	71006561	+	Missense_Mutation	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHF21B	112885	broad.mit.edu	37	22	45309812	45309812	+	Nonsense_Mutation	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHLDB1	23187	broad.mit.edu	37	11	118509715	118509715	+	Missense_Mutation	SNP	A	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHLDB2	90102	broad.mit.edu	37	3	111603453	111603453	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHOSPHO2	493911	broad.mit.edu	37	2	170558020	170558020	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHYH	5264	broad.mit.edu	37	10	13336346	13336346	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PI4KA	5297	broad.mit.edu	37	22	21098845	21098845	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIAS1	8554	broad.mit.edu	37	15	68378695	68378695	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PID1	55022	broad.mit.edu	37	2	229890732	229890732	+	Silent	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIF1	80119	broad.mit.edu	37	15	65114814	65114814	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIGA	5277	broad.mit.edu	37	X	15339900	15339900	+	Intron	DEL	G	-	-			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIGM	93183	broad.mit.edu	37	1	160000083	160000083	+	3'UTR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIGQ	9091	broad.mit.edu	37	16	629048	629048	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIGQ	9091	broad.mit.edu	37	16	630780	630780	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3CG	5294	broad.mit.edu	37	7	106524485	106524485	+	Intron	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3R6	146850	broad.mit.edu	37	17	8753154	8753154	+	5'UTR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIP4K2C	79837	broad.mit.edu	37	12	57993227	57993227	+	Intron	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIP5K1C	23396	broad.mit.edu	37	19	3660868	3660868	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PITX1	5307	broad.mit.edu	37	5	134364843	134364843	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIWIL1	9271	broad.mit.edu	37	12	130841624	130841624	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD1L1	168507	broad.mit.edu	37	7	47925180	47925180	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD2L2	27039	broad.mit.edu	37	5	137257250	137257250	+	Intron	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1L1	93035	broad.mit.edu	37	8	110455414	110455414	+	Intron	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1	5314	broad.mit.edu	37	6	51768588	51768588	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1	5314	broad.mit.edu	37	6	51909775	51909776	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKLR	5313	broad.mit.edu	37	1	155264414	155264414	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKLR	5313	broad.mit.edu	37	1	155269945	155269946	+	Missense_Mutation	DNP	AG	TT	TT			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKNOX1	5316	broad.mit.edu	37	21	44449838	44449838	+	Intron	SNP	G	T	T	rs143898734		TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKP2	5318	broad.mit.edu	37	12	32955375	32955375	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKP3	11187	broad.mit.edu	37	11	397119	397119	+	Silent	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2G4A	5321	broad.mit.edu	37	1	186934605	186934605	+	Silent	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2G4C	8605	broad.mit.edu	37	19	48591944	48591944	+	Frame_Shift_Del	DEL	T	-	-			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLAU	5328	broad.mit.edu	37	10	75673077	75673077	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCB1	23236	broad.mit.edu	37	20	8696897	8696897	+	Intron	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCE1	51196	broad.mit.edu	37	10	95931134	95931134	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCH2	9651	broad.mit.edu	37	1	2409932	2409932	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCH2	9651	broad.mit.edu	37	1	2428342	2428342	+	Missense_Mutation	SNP	A	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCL1	5334	broad.mit.edu	37	2	199011651	199011651	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCXD3	345557	broad.mit.edu	37	5	41313851	41313851	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLD1	5337	broad.mit.edu	37	3	171323120	171323120	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEC	5339	broad.mit.edu	37	8	145006527	145006527	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEK2	26499	broad.mit.edu	37	14	67859505	67859505	+	Silent	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHA5	54477	broad.mit.edu	37	12	19459505	19459505	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHB2	55041	broad.mit.edu	37	2	131948926	131948926	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHB2	55041	broad.mit.edu	37	2	131960364	131960364	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHB2	55041	broad.mit.edu	37	2	131960429	131960430	+	Intron	DNP	GG	TT	TT			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHG2	64857	broad.mit.edu	37	19	39909336	39909336	+	Intron	DEL	A	-	-			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEK	5341	broad.mit.edu	37	2	68613865	68613865	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLG	5340	broad.mit.edu	37	6	161160296	161160296	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLK2	10769	broad.mit.edu	37	5	57755824	57755824	+	Translation_Start_Site	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLOD2	5352	broad.mit.edu	37	3	145820679	145820679	+	Intron	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLVAP	83483	broad.mit.edu	37	19	17476329	17476329	+	Silent	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA1	5361	broad.mit.edu	37	3	126707723	126707723	+	Missense_Mutation	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA4	91584	broad.mit.edu	37	7	131825444	131825444	+	Silent	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNC1	10154	broad.mit.edu	37	12	94642069	94642069	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNLIPRP1	5407	broad.mit.edu	37	10	118359466	118359466	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNLIPRP3	119548	broad.mit.edu	37	10	118204012	118204012	+	Missense_Mutation	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNPLA4	8228	broad.mit.edu	37	X	7870224	7870224	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNPLA5	150379	broad.mit.edu	37	22	44279923	44279923	+	Intron	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNPLA6	10908	broad.mit.edu	37	19	7605228	7605228	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNPT1	87178	broad.mit.edu	37	2	55894185	55894185	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLE	5426	broad.mit.edu	37	12	133248877	133248877	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLM	27434	broad.mit.edu	37	7	44118364	44118364	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLQ	10721	broad.mit.edu	37	3	121230733	121230733	+	Splice_Site	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR2A	5430	broad.mit.edu	37	17	7405852	7405853	+	Missense_Mutation	DNP	GG	TT	TT	rs148495191	byFrequency;by1000genomes	TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR3A	11128	broad.mit.edu	37	10	79753014	79753014	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POT1	25913	broad.mit.edu	37	7	124464130	124464130	+	Intron	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POTEA	340441	broad.mit.edu	37	8	43147871	43147871	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POTEF	728378	broad.mit.edu	37	2	130832810	130832810	+	Silent	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POTEG	404785	broad.mit.edu	37	14	19566063	19566063	+	Silent	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POTEG	404785	broad.mit.edu	37	14	19566082	19566082	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POTEH	23784	broad.mit.edu	37	22	16287207	16287207	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POTEH	23784	broad.mit.edu	37	22	16287211	16287211	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POTEH	23784	broad.mit.edu	37	22	16287380	16287380	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POTEH	23784	broad.mit.edu	37	22	16287853	16287853	+	Silent	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPEF2	5470	broad.mit.edu	37	4	76781891	76781891	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPIP5K2	23262	broad.mit.edu	37	5	102503828	102503828	+	Silent	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R12B	4660	broad.mit.edu	37	1	202391829	202391829	+	Silent	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R12B	4660	broad.mit.edu	37	1	202391853	202391853	+	Missense_Mutation	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R9B	84687	broad.mit.edu	37	17	48222712	48222712	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R1A	5518	broad.mit.edu	37	19	52728931	52728931	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP4R1	9989	broad.mit.edu	37	18	9570087	9570087	+	Intron	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP4R2	151987	broad.mit.edu	37	3	73047217	73047217	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRAMEF1	65121	broad.mit.edu	37	1	12853516	12853516	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRAMEF8	391002	broad.mit.edu	37	1	12979865	12979865	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRB3	5544	broad.mit.edu	37	12	11421703	11421703	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRCD	768206	broad.mit.edu	37	17	74538531	74538531	+	Intron	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDX6	9588	broad.mit.edu	37	1	173455406	173455406	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PREPL	9581	broad.mit.edu	37	2	44571725	44571725	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PREP	5550	broad.mit.edu	37	6	105776623	105776623	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PREX2	80243	broad.mit.edu	37	8	68999897	68999897	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKAR1B	5575	broad.mit.edu	37	7	716753	716753	+	Intron	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKCB	5579	broad.mit.edu	37	16	24196597	24196597	+	Intron	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKCE	5581	broad.mit.edu	37	2	46203900	46203900	+	Intron	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKCG	5582	broad.mit.edu	37	19	54410213	54410213	+	3'UTR	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKD1	5587	broad.mit.edu	37	14	30046644	30046644	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKG1	5592	broad.mit.edu	37	10	54032160	54032160	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRMT10	90826	broad.mit.edu	37	4	148575242	148575242	+	Silent	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PROM1	8842	broad.mit.edu	37	4	16010666	16010666	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRR11	55771	broad.mit.edu	37	17	57257128	57257128	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRR11	55771	broad.mit.edu	37	17	57279141	57279141	+	3'UTR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRR23C	389152	broad.mit.edu	37	3	138762737	138762737	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRRX1	5396	broad.mit.edu	37	1	170695491	170695491	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRRX1	5396	broad.mit.edu	37	1	170699234	170699234	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRSS1	5644	broad.mit.edu	37	7	142460067	142460067	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRSS38	339501	broad.mit.edu	37	1	228003800	228003800	+	Missense_Mutation	SNP	G	T	T	rs144830766	byFrequency	TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRSS54	221191	broad.mit.edu	37	16	58314359	58314359	+	Silent	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG4	5672	broad.mit.edu	37	19	43699635	43699635	+	Intron	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG6	5675	broad.mit.edu	37	19	43439524	43439524	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTCD1	26024	broad.mit.edu	37	7	99048224	99048224	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTGDR	5729	broad.mit.edu	37	14	52735269	52735269	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTGFR	5737	broad.mit.edu	37	1	79002163	79002163	+	Silent	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTK7	5754	broad.mit.edu	37	6	43106643	43106643	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTK7	5754	broad.mit.edu	37	6	43112186	43112186	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN23	25930	broad.mit.edu	37	3	47448250	47448250	+	Intron	SNP	A	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN23	25930	broad.mit.edu	37	3	47453615	47453615	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN5	84867	broad.mit.edu	37	11	18759355	18759356	+	Intron	DNP	CC	AA	AA			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRC	5788	broad.mit.edu	37	1	198671480	198671480	+	Intron	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRC	5788	broad.mit.edu	37	1	198677229	198677229	+	Intron	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	8633443	8633443	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRH	5794	broad.mit.edu	37	19	55702802	55702802	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRU	10076	broad.mit.edu	37	1	29642666	29642666	+	Intron	DEL	G	-	-			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTS	5805	broad.mit.edu	37	11	112138746	112138746	+	Intron	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PXDNL	137902	broad.mit.edu	37	8	52366196	52366196	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PYHIN1	149628	broad.mit.edu	37	1	158908060	158908060	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PYROXD2	84795	broad.mit.edu	37	10	100146994	100146994	+	Silent	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB3GAP2	25782	broad.mit.edu	37	1	220440457	220440457	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB5B	5869	broad.mit.edu	37	12	56385939	56385939	+	Silent	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB9B	51209	broad.mit.edu	37	X	103080189	103080189	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RABL3	285282	broad.mit.edu	37	3	120413142	120413142	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RACGAP1P	83956	broad.mit.edu	37	12	45457981	45457982	+	RNA	DNP	CC	AA	AA			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAE1	8480	broad.mit.edu	37	20	55948931	55948931	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAGE	5891	broad.mit.edu	37	14	102717145	102717145	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RALYL	138046	broad.mit.edu	37	8	85441840	85441840	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RANBP17	64901	broad.mit.edu	37	5	170640791	170640791	+	Intron	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RANBP2	5903	broad.mit.edu	37	2	109393758	109393758	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAP1GAP	5909	broad.mit.edu	37	1	21925963	21925963	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAP1GAP	5909	broad.mit.edu	37	1	21936223	21936223	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RARB	5915	broad.mit.edu	37	3	25542753	25542753	+	Silent	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASGRF2	5924	broad.mit.edu	37	5	80382877	80382877	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAVER1	125950	broad.mit.edu	37	19	10429882	10429882	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAX	30062	broad.mit.edu	37	18	56940074	56940074	+	Intron	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBBP6	5930	broad.mit.edu	37	16	24580457	24580457	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM17	84991	broad.mit.edu	37	10	6143252	6143252	+	Missense_Mutation	SNP	A	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM46	166863	broad.mit.edu	37	4	155749036	155749036	+	Silent	SNP	C	A	A	rs146619160		TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM9	23543	broad.mit.edu	37	22	36206048	36206048	+	Missense_Mutation	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RCAN2	10231	broad.mit.edu	37	6	46190826	46190826	+	3'UTR	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RDH13	112724	broad.mit.edu	37	19	55568079	55568079	+	Silent	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RDH16	8608	broad.mit.edu	37	12	57351015	57351015	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RECQL5	9400	broad.mit.edu	37	17	73657142	73657142	+	Silent	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REG1B	5968	broad.mit.edu	37	2	79312369	79312369	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REG1B	5968	broad.mit.edu	37	2	79312429	79312429	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REG1B	5968	broad.mit.edu	37	2	79314057	79314057	+	Splice_Site	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REG3A	5068	broad.mit.edu	37	2	79384787	79384787	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REG3A	5068	broad.mit.edu	37	2	79386540	79386540	+	5'UTR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RELN	5649	broad.mit.edu	37	7	103270408	103270408	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RELN	5649	broad.mit.edu	37	7	103389853	103389853	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RET	5979	broad.mit.edu	37	10	43602031	43602031	+	Intron	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RET	5979	broad.mit.edu	37	10	43612207	43612207	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RET	5979	broad.mit.edu	37	10	43615704	43615704	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFX1	5989	broad.mit.edu	37	19	14073934	14073934	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGNEF	64283	broad.mit.edu	37	5	73136209	73136209	+	Intron	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGPD4	285190	broad.mit.edu	37	2	108487578	108487579	+	Missense_Mutation	DNP	CC	AG	AG			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS12	6002	broad.mit.edu	37	4	3418535	3418535	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS16	6004	broad.mit.edu	37	1	182572554	182572554	+	Intron	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS1	5996	broad.mit.edu	37	1	192544976	192544976	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS22	26166	broad.mit.edu	37	8	101076210	101076210	+	Missense_Mutation	SNP	G	T	T	rs139754977	by1000genomes	TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS3	5998	broad.mit.edu	37	9	116276913	116276913	+	Silent	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS7	6000	broad.mit.edu	37	1	240969527	240969527	+	Silent	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS7	6000	broad.mit.edu	37	1	241161967	241161967	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHCE	6006	broad.mit.edu	37	1	25718665	25718665	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHOBTB3	22836	broad.mit.edu	37	5	95099121	95099121	+	Intron	SNP	A	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHOXF2B	727940	broad.mit.edu	37	X	119211112	119211112	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHPN2	85415	broad.mit.edu	37	19	33512610	33512610	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RICH2	9912	broad.mit.edu	37	17	12862139	12862139	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMKLA	284716	broad.mit.edu	37	1	42875633	42875633	+	Intron	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS1	22999	broad.mit.edu	37	6	72892193	72892193	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS4	140730	broad.mit.edu	37	20	43400047	43400047	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RLN1	6013	broad.mit.edu	37	9	5339540	5339540	+	Silent	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RLTPR	146206	broad.mit.edu	37	16	67680346	67680346	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RMND5A	64795	broad.mit.edu	37	2	87398409	87398409	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNASE10	338879	broad.mit.edu	37	14	20978889	20978890	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF123	63891	broad.mit.edu	37	3	49739876	49739876	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF150	57484	broad.mit.edu	37	4	141868976	141868976	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF207	388591	broad.mit.edu	37	1	6270128	6270128	+	Intron	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF4	6047	broad.mit.edu	37	4	2513616	2513616	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROBO2	6092	broad.mit.edu	37	3	77366530	77366530	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROCK1	6093	broad.mit.edu	37	18	18690946	18690946	+	5'UTR	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROR2	4920	broad.mit.edu	37	9	94487290	94487290	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPL27A	6157	broad.mit.edu	37	11	8707067	8707067	+	Intron	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPL3L	6123	broad.mit.edu	37	16	2001035	2001035	+	Intron	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPL8	6132	broad.mit.edu	37	8	146017336	146017336	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPS6	6194	broad.mit.edu	37	9	19376723	19376723	+	Intron	SNP	A	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSPH10B2	728194	broad.mit.edu	37	7	6820652	6820653	+	Intron	DNP	GG	TT	TT			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTBDN	83546	broad.mit.edu	37	19	12939733	12939733	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUNX1	861	broad.mit.edu	37	21	36421221	36421221	+	5'UTR	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237993770	237993770	+	Intron	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237993832	237993832	+	Silent	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237993872	237993872	+	Missense_Mutation	SNP	A	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SACS	26278	broad.mit.edu	37	13	23909848	23909848	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMM50	25813	broad.mit.edu	37	22	44368118	44368118	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMSN1	64092	broad.mit.edu	37	21	15882899	15882899	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SASH3	54440	broad.mit.edu	37	X	128924737	128924737	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SATB2	23314	broad.mit.edu	37	2	200246529	200246529	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SC4MOL	6307	broad.mit.edu	37	4	166261514	166261514	+	Missense_Mutation	SNP	A	C	C	rs145987291		TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCD5	79966	broad.mit.edu	37	4	83552684	83552684	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCEL	8796	broad.mit.edu	37	13	78173884	78173884	+	Splice_Site	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCGB3A2	117156	broad.mit.edu	37	5	147260905	147260905	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCML2	10389	broad.mit.edu	37	X	18275192	18275192	+	Intron	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN1A	6323	broad.mit.edu	37	2	166892752	166892752	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN5A	6331	broad.mit.edu	37	3	38608022	38608022	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN8A	6334	broad.mit.edu	37	12	52082842	52082842	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCRN1	9805	broad.mit.edu	37	7	29980336	29980336	+	Missense_Mutation	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCUBE1	80274	broad.mit.edu	37	22	43603622	43603622	+	Intron	DEL	G	-	-			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDCCAG3	10807	broad.mit.edu	37	9	139304459	139304459	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDHAF2	54949	broad.mit.edu	37	11	61197628	61197628	+	Missense_Mutation	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDK1	221935	broad.mit.edu	37	7	3860954	3860954	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDS	10993	broad.mit.edu	37	12	113836547	113836547	+	Missense_Mutation	SNP	T	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC14L5	9717	broad.mit.edu	37	16	5055988	5055988	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC61A2	55176	broad.mit.edu	37	10	12191875	12191875	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA4A	64218	broad.mit.edu	37	1	156146368	156146368	+	Silent	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA4C	54910	broad.mit.edu	37	2	97529542	97529542	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SENP6	26054	broad.mit.edu	37	6	76376442	76376442	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SENP6	26054	broad.mit.edu	37	6	76423247	76423247	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SENP7	57337	broad.mit.edu	37	3	101060667	101060667	+	Intron	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEPN1	57190	broad.mit.edu	37	1	26127769	26127769	+	Intron	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEPT5	5413	broad.mit.edu	37	22	19708337	19708337	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERHL	94009	broad.mit.edu	37	22	42908077	42908077	+	Intron	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINA11	256394	broad.mit.edu	37	14	94914725	94914725	+	Silent	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINA12	145264	broad.mit.edu	37	14	94962858	94962858	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINA13	388007	broad.mit.edu	37	14	95109913	95109913	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINA6	866	broad.mit.edu	37	14	94770803	94770803	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINB12	89777	broad.mit.edu	37	18	61226923	61226923	+	Missense_Mutation	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINB4	6318	broad.mit.edu	37	18	61328208	61328208	+	Intron	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPING1	710	broad.mit.edu	37	11	57374175	57374175	+	Intron	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINI2	5276	broad.mit.edu	37	3	167159974	167159974	+	Intron	SNP	C	T	T	rs148696355		TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SESTD1	91404	broad.mit.edu	37	2	179989108	179989108	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETBP1	26040	broad.mit.edu	37	18	42531802	42531802	+	Nonsense_Mutation	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETDB1	9869	broad.mit.edu	37	1	150934743	150934743	+	Intron	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SF3B2	10992	broad.mit.edu	37	11	65824773	65824773	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SF4	57794	broad.mit.edu	37	19	19427244	19427244	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFMBT2	57713	broad.mit.edu	37	10	7262274	7262274	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFTPB	6439	broad.mit.edu	37	2	85894569	85894569	+	Intron	DEL	C	-	-	rs3024797		TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFTPD	6441	broad.mit.edu	37	10	81697894	81697894	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFXN4	119559	broad.mit.edu	37	10	120907275	120907275	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGIP1	84251	broad.mit.edu	37	1	67147788	67147788	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGSM1	129049	broad.mit.edu	37	22	25294099	25294099	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGSM3	27352	broad.mit.edu	37	22	40801211	40801211	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH2D3C	10044	broad.mit.edu	37	9	130509559	130509559	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3TC2	79628	broad.mit.edu	37	5	148384392	148384392	+	Missense_Mutation	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3TC2	79628	broad.mit.edu	37	5	148427439	148427439	+	Missense_Mutation	SNP	G	A	A	rs142488510	by1000genomes	TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHANK1	50944	broad.mit.edu	37	19	51192283	51192283	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHFM1	7979	broad.mit.edu	37	7	96339249	96339249	+	5'Flank	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHROOM2	357	broad.mit.edu	37	X	9862978	9862978	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHROOM3	57619	broad.mit.edu	37	4	77631272	77631272	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHROOM3	57619	broad.mit.edu	37	4	77661931	77661931	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC10	89790	broad.mit.edu	37	19	51918651	51918651	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC1	6614	broad.mit.edu	37	20	3683828	3683828	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC5	8778	broad.mit.edu	37	19	52133030	52133030	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SI	6476	broad.mit.edu	37	3	164727062	164727063	+	Intron	DNP	CT	AC	AC			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLAMF8	56833	broad.mit.edu	37	1	159803141	159803141	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLAMF9	89886	broad.mit.edu	37	1	159921658	159921658	+	Intron	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A2	6558	broad.mit.edu	37	5	127507508	127507508	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A5	57468	broad.mit.edu	37	20	44675012	44675012	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A7	10723	broad.mit.edu	37	5	1094281	1094281	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC17A1	6568	broad.mit.edu	37	6	25813574	25813574	+	Intron	SNP	T	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC17A1	6568	broad.mit.edu	37	6	25826618	25826618	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A11	55867	broad.mit.edu	37	11	64329846	64329846	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A6	9356	broad.mit.edu	37	11	62749558	62749558	+	Intron	SNP	A	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A7	10864	broad.mit.edu	37	6	43269812	43269812	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A9	114571	broad.mit.edu	37	11	63137513	63137513	+	5'UTR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A33	84275	broad.mit.edu	37	1	9630248	9630248	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A44	9673	broad.mit.edu	37	1	156169567	156169567	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A3	1811	broad.mit.edu	37	7	107431524	107431524	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A7	115111	broad.mit.edu	37	8	92330508	92330508	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A7	115111	broad.mit.edu	37	8	92364058	92364058	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A7	115111	broad.mit.edu	37	8	92401549	92401549	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC27A1	376497	broad.mit.edu	37	19	17611545	17611545	+	Missense_Mutation	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC30A8	169026	broad.mit.edu	37	8	118147720	118147720	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC35B1	10237	broad.mit.edu	37	17	47782381	47782381	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC35B1	10237	broad.mit.edu	37	17	47783252	47783252	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC35C2	51006	broad.mit.edu	37	20	44986052	44986052	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC35F3	148641	broad.mit.edu	37	1	234458700	234458700	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC36A1	206358	broad.mit.edu	37	5	150856211	150856211	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC38A3	10991	broad.mit.edu	37	3	50253108	50253108	+	Intron	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC39A7	7922	broad.mit.edu	37	6	33170037	33170037	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC41A3	54946	broad.mit.edu	37	3	125731602	125731602	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC43A2	124935	broad.mit.edu	37	17	1479966	1479966	+	Silent	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC44A1	23446	broad.mit.edu	37	9	108136902	108136902	+	Silent	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC44A5	204962	broad.mit.edu	37	1	75699758	75699758	+	Missense_Mutation	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A1	6521	broad.mit.edu	37	17	42337251	42337252	+	Missense_Mutation	DNP	TC	GT	GT			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A4	6527	broad.mit.edu	37	22	32614536	32614536	+	Missense_Mutation	SNP	C	A	A	rs148281524	byFrequency	TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A5	6528	broad.mit.edu	37	19	18004477	18004477	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A11	6538	broad.mit.edu	37	3	10976660	10976660	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A18	348932	broad.mit.edu	37	5	1235800	1235800	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A4	6532	broad.mit.edu	37	17	28530083	28530083	+	Intron	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC7A13	157724	broad.mit.edu	37	8	87226886	87226886	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC7A14	57709	broad.mit.edu	37	3	170219108	170219108	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC7A3	84889	broad.mit.edu	37	X	70148669	70148669	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC8A1	6546	broad.mit.edu	37	2	40657534	40657534	+	5'Flank	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A1	6548	broad.mit.edu	37	1	27426944	27426945	+	Nonsense_Mutation	DNP	CC	AT	AT			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A3	6550	broad.mit.edu	37	5	476405	476405	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A9	285195	broad.mit.edu	37	3	143297757	143297757	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO2B1	11309	broad.mit.edu	37	11	74914561	74914561	+	Intron	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO5A1	81796	broad.mit.edu	37	8	70617325	70617325	+	Silent	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO5A1	81796	broad.mit.edu	37	8	70706674	70706674	+	Intron	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT3	6586	broad.mit.edu	37	5	168187881	168187881	+	Silent	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT3	6586	broad.mit.edu	37	5	168189789	168189789	+	Intron	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLITRK1	114798	broad.mit.edu	37	13	84455652	84455652	+	5'UTR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLITRK5	26050	broad.mit.edu	37	13	88328566	88328566	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMAP2	64744	broad.mit.edu	37	1	40881975	40881975	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMURF1	57154	broad.mit.edu	37	7	98639927	98639927	+	Intron	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMURF1	57154	broad.mit.edu	37	7	98643368	98643368	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SND1	27044	broad.mit.edu	37	7	127341286	127341287	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNIP1	79753	broad.mit.edu	37	1	38006165	38006165	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD114-20	767598	broad.mit.edu	37	14	101447309	101447309	+	5'Flank	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD115-11	100033448	broad.mit.edu	37	15	25432929	25432929	+	5'Flank	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD115-13	100033450	broad.mit.edu	37	15	25438402	25438402	+	RNA	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD115-20	100033460	broad.mit.edu	37	15	25463694	25463694	+	Intron	SNP	T	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD116-4	100033416	broad.mit.edu	37	15	25344792	25344792	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNTG1	54212	broad.mit.edu	37	8	51449214	51449214	+	Intron	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNTG1	54212	broad.mit.edu	37	8	51449291	51449291	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNTG2	54221	broad.mit.edu	37	2	1093720	1093720	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNTG2	54221	broad.mit.edu	37	2	1205029	1205029	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX1	6642	broad.mit.edu	37	15	64404771	64404771	+	Splice_Site	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX25	83891	broad.mit.edu	37	4	186180179	186180179	+	Missense_Mutation	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS1	114815	broad.mit.edu	37	10	108377782	108377782	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS1	114815	broad.mit.edu	37	10	108439366	108439366	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS1	114815	broad.mit.edu	37	10	108458951	108458951	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOS1	6654	broad.mit.edu	37	2	39222459	39222459	+	Missense_Mutation	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOX13	9580	broad.mit.edu	37	1	204085496	204085496	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOX6	55553	broad.mit.edu	37	11	15994452	15994452	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SP110	3431	broad.mit.edu	37	2	231041485	231041485	+	Intron	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SP110	3431	broad.mit.edu	37	2	231065682	231065682	+	Splice_Site	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG16	79582	broad.mit.edu	37	2	215145615	215145615	+	Intron	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAM1	6677	broad.mit.edu	37	7	123594257	123594257	+	Silent	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPANXN1	494118	broad.mit.edu	37	X	144337437	144337437	+	3'UTR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPANXN2	494119	broad.mit.edu	37	X	142795594	142795594	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATA16	83893	broad.mit.edu	37	3	172834904	172834904	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATA17	128153	broad.mit.edu	37	1	217947839	217947839	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATA18	132671	broad.mit.edu	37	4	52926770	52926770	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATA5	166378	broad.mit.edu	37	4	123844162	123844162	+	5'Flank	SNP	A	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATA6	54558	broad.mit.edu	37	1	48825194	48825194	+	Intron	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEF2	79925	broad.mit.edu	37	5	35670312	35670312	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEN	23013	broad.mit.edu	37	1	16258070	16258070	+	Missense_Mutation	SNP	G	T	T	rs140024761	byFrequency	TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPERT	220082	broad.mit.edu	37	13	46276762	46276762	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPESP1	246777	broad.mit.edu	37	15	69238267	69238267	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPHKAP	80309	broad.mit.edu	37	2	228882376	228882376	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPINK13	153218	broad.mit.edu	37	5	147661762	147661762	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPNS1	83985	broad.mit.edu	37	16	28993606	28993606	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPOCK1	6695	broad.mit.edu	37	5	136320810	136320811	+	Intron	DNP	GG	AA	AA			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPRY4	81848	broad.mit.edu	37	5	141693977	141693977	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158626346	158626346	+	Intron	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158632624	158632624	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158650603	158650604	+	Intron	DNP	CC	AA	AA			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158651164	158651164	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158651177	158651177	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTAN1	6709	broad.mit.edu	37	9	131369912	131369912	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTBN1	6711	broad.mit.edu	37	2	54826187	54826187	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTB	6710	broad.mit.edu	37	14	65260272	65260272	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTLC2	9517	broad.mit.edu	37	14	78023322	78023322	+	Intron	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRGAP1	57522	broad.mit.edu	37	12	64519834	64519834	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRGAP1	57522	broad.mit.edu	37	12	64519952	64519952	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRRM2	23524	broad.mit.edu	37	16	2818920	2818920	+	Intron	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSPO	23145	broad.mit.edu	37	7	149483252	149483252	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSTR5	6755	broad.mit.edu	37	16	1128926	1128926	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSX5	6758	broad.mit.edu	37	X	48047041	48047041	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST6GAL2	84620	broad.mit.edu	37	2	107459730	107459730	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST6GALNAC2	10610	broad.mit.edu	37	17	74563515	74563515	+	Intron	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST8SIA3	51046	broad.mit.edu	37	18	55020225	55020225	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAB1	23166	broad.mit.edu	37	3	52536291	52536291	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAB2	55576	broad.mit.edu	37	12	104118665	104118665	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAT4	6775	broad.mit.edu	37	2	191926404	191926404	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAU2	27067	broad.mit.edu	37	8	74464373	74464373	+	Silent	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STEAP2	261729	broad.mit.edu	37	7	89854323	89854323	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK31	56164	broad.mit.edu	37	7	23802539	23802539	+	Silent	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK36	27148	broad.mit.edu	37	2	219553627	219553627	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STOML2	30968	broad.mit.edu	37	9	35102251	35102251	+	Intron	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STRBP	55342	broad.mit.edu	37	9	125920215	125920215	+	Intron	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STX8	9482	broad.mit.edu	37	17	9281762	9281762	+	Intron	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STXBP5L	9515	broad.mit.edu	37	3	120957869	120957869	+	Silent	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUN1	23353	broad.mit.edu	37	7	896192	896192	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUPT16H	11198	broad.mit.edu	37	14	21851948	21851948	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUPT16H	11198	broad.mit.edu	37	14	21851982	21851982	+	Intron	SNP	A	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SURF1	6834	broad.mit.edu	37	9	136220842	136220842	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SV2C	22987	broad.mit.edu	37	5	75490762	75490762	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SV2C	22987	broad.mit.edu	37	5	75537847	75537847	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYMPK	8189	broad.mit.edu	37	19	46319799	46319799	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYN2	6854	broad.mit.edu	37	3	12192691	12192691	+	Intron	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYN2	6854	broad.mit.edu	37	3	12200101	12200101	+	Intron	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYN3	8224	broad.mit.edu	37	22	32909928	32909928	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE1	23345	broad.mit.edu	37	6	152469245	152469245	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE1	23345	broad.mit.edu	37	6	152599126	152599126	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNPO2	171024	broad.mit.edu	37	4	119952640	119952640	+	Missense_Mutation	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNPO2	171024	broad.mit.edu	37	4	119979120	119979120	+	3'UTR	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT10	341359	broad.mit.edu	37	12	33559893	33559893	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT12	91683	broad.mit.edu	37	11	66812321	66812321	+	Intron	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT14	255928	broad.mit.edu	37	1	210267766	210267766	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT9	143425	broad.mit.edu	37	11	7441832	7441832	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TACC1	6867	broad.mit.edu	37	8	38693629	38693629	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TACC3	10460	broad.mit.edu	37	4	1729232	1729232	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF1	6872	broad.mit.edu	37	X	70597538	70597538	+	Missense_Mutation	SNP	A	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAGLN3	29114	broad.mit.edu	37	3	111732327	111732327	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAOK2	9344	broad.mit.edu	37	16	29989365	29989365	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TARS2	80222	broad.mit.edu	37	1	150464060	150464060	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAS2R31	259290	broad.mit.edu	37	12	11183830	11183830	+	Silent	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TATDN1	83940	broad.mit.edu	37	8	125531027	125531027	+	Intron	DEL	T	-	-	rs76737368		TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TATDN1	83940	broad.mit.edu	37	8	125535238	125535238	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D1	23216	broad.mit.edu	37	4	38037262	38037262	+	Silent	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D5	9779	broad.mit.edu	37	3	17448047	17448047	+	Intron	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D5	9779	broad.mit.edu	37	3	17747672	17747672	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D9	23158	broad.mit.edu	37	4	141590959	141590959	+	Splice_Site	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX22	50945	broad.mit.edu	37	X	79277767	79277767	+	5'UTR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX2	6909	broad.mit.edu	37	17	59485396	59485396	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX5	6910	broad.mit.edu	37	12	114832473	114832473	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX5	6910	broad.mit.edu	37	12	114837133	114837133	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCEB3B	51224	broad.mit.edu	37	18	44561593	44561593	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCEB3C	162699	broad.mit.edu	37	18	44554581	44554581	+	Nonsense_Mutation	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCF19	6941	broad.mit.edu	37	6	31129474	31129474	+	Silent	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCF23	150921	broad.mit.edu	37	2	27373132	27373132	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCF4	6925	broad.mit.edu	37	18	52942961	52942961	+	Silent	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCHH	7062	broad.mit.edu	37	1	152080695	152080695	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCN2	6948	broad.mit.edu	37	22	31018994	31018994	+	Silent	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCTEX1D1	200132	broad.mit.edu	37	1	67243037	67243037	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCTN2	79867	broad.mit.edu	37	12	124175131	124175131	+	Missense_Mutation	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDRD1	56165	broad.mit.edu	37	10	115987609	115987609	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDRD3	81550	broad.mit.edu	37	13	61057959	61057959	+	Silent	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TENC1	23371	broad.mit.edu	37	12	53452352	53452352	+	Intron	SNP	A	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEX15	56154	broad.mit.edu	37	8	30703267	30703267	+	Silent	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEX261	113419	broad.mit.edu	37	2	71219180	71219180	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEX261	113419	broad.mit.edu	37	2	71220883	71220883	+	Silent	SNP	T	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFDP3	51270	broad.mit.edu	37	X	132351801	132351801	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TF	7018	broad.mit.edu	37	3	133485215	133485215	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGFB2	7042	broad.mit.edu	37	1	218609453	218609453	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGM2	7052	broad.mit.edu	37	20	36766847	36766847	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TG	7038	broad.mit.edu	37	8	133906337	133906337	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TG	7038	broad.mit.edu	37	8	133925417	133925417	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TG	7038	broad.mit.edu	37	8	134025908	134025908	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THG1L	54974	broad.mit.edu	37	5	157164919	157164919	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THRAP3	9967	broad.mit.edu	37	1	36758225	36758225	+	Missense_Mutation	SNP	A	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THSD1P1	374500	broad.mit.edu	37	13	52796801	52796801	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIAM2	26230	broad.mit.edu	37	6	155504666	155504666	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIE1	7075	broad.mit.edu	37	1	43777281	43777281	+	Intron	SNP	A	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIMD4	91937	broad.mit.edu	37	5	156346473	156346474	+	Missense_Mutation	DNP	GG	AA	AA			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIMP2	7077	broad.mit.edu	37	17	76853736	76853736	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLL2	7093	broad.mit.edu	37	10	98156978	98156978	+	Missense_Mutation	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLN1	7094	broad.mit.edu	37	9	35699959	35699959	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TM4SF1	4071	broad.mit.edu	37	3	149089533	149089533	+	Missense_Mutation	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TM6SF1	53346	broad.mit.edu	37	15	83791716	83791716	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TM6SF2	53345	broad.mit.edu	37	19	19377337	19377337	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMC1	117531	broad.mit.edu	37	9	75369809	75369809	+	Intron	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMC3	342125	broad.mit.edu	37	15	81637255	81637255	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMC6	11322	broad.mit.edu	37	17	76113296	76113296	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM111	55831	broad.mit.edu	37	3	10005863	10005863	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM130	222865	broad.mit.edu	37	7	98445783	98445783	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM130	222865	broad.mit.edu	37	7	98452787	98452787	+	Intron	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM132E	124842	broad.mit.edu	37	17	32956990	32956990	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM156	80008	broad.mit.edu	37	4	38972821	38972821	+	Intron	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM63B	55362	broad.mit.edu	37	6	44117945	44117945	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM82	388595	broad.mit.edu	37	1	16070920	16070921	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM87B	84910	broad.mit.edu	37	2	112849310	112849310	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM8B	51754	broad.mit.edu	37	9	35853628	35853628	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM90B	79953	broad.mit.edu	37	20	24565735	24565736	+	Intron	DNP	CC	AA	AA			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM98	26022	broad.mit.edu	37	17	31266350	31266350	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMOD3	29766	broad.mit.edu	37	15	52194302	52194302	+	Intron	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS15	5651	broad.mit.edu	37	21	19653279	19653279	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS15	5651	broad.mit.edu	37	21	19666984	19666984	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS4	56649	broad.mit.edu	37	11	117969814	117969814	+	Splice_Site	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS7	344805	broad.mit.edu	37	3	111782419	111782419	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMTC1	83857	broad.mit.edu	37	12	29736290	29736290	+	Intron	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMTC1	83857	broad.mit.edu	37	12	29736292	29736292	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMTC1	83857	broad.mit.edu	37	12	29786026	29786026	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMTC1	83857	broad.mit.edu	37	12	29786293	29786293	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMTC1	83857	broad.mit.edu	37	12	29904726	29904726	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNFRSF1A	7132	broad.mit.edu	37	12	6442132	6442132	+	Intron	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNFSF8	944	broad.mit.edu	37	9	117666507	117666507	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNFSF9	8744	broad.mit.edu	37	19	6530970	6530970	+	5'Flank	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNIP1	10318	broad.mit.edu	37	5	150422394	150422394	+	Intron	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNNT2	7139	broad.mit.edu	37	1	201328681	201328681	+	Intron	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNNT3	7140	broad.mit.edu	37	11	1953727	1953727	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNN	63923	broad.mit.edu	37	1	175053004	175053004	+	Silent	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNN	63923	broad.mit.edu	37	1	175067651	175067651	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNN	63923	broad.mit.edu	37	1	175087879	175087879	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNN	63923	broad.mit.edu	37	1	175092742	175092742	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNN	63923	broad.mit.edu	37	1	175096310	175096310	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNR	7143	broad.mit.edu	37	1	175299342	175299342	+	Nonsense_Mutation	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNR	7143	broad.mit.edu	37	1	175334926	175334926	+	Intron	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNR	7143	broad.mit.edu	37	1	175363182	175363182	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOLLIP	54472	broad.mit.edu	37	11	1298328	1298328	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOM1	10043	broad.mit.edu	37	22	35718093	35718093	+	Intron	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOM1	10043	broad.mit.edu	37	22	35743297	35743297	+	3'UTR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP53	7157	broad.mit.edu	37	17	7576928	7576928	+	Splice_Site	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPD52L3	89882	broad.mit.edu	37	9	6328619	6328619	+	Silent	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPH1	7166	broad.mit.edu	37	11	18051103	18051103	+	Silent	SNP	A	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPH2	121278	broad.mit.edu	37	12	72366135	72366135	+	Intron	SNP	A	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPP2	7174	broad.mit.edu	37	13	103301782	103301782	+	Silent	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPP2	7174	broad.mit.edu	37	13	103301784	103301784	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE	7179	broad.mit.edu	37	21	10933880	10933880	+	Silent	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE	7179	broad.mit.edu	37	21	10951340	10951340	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE	7179	broad.mit.edu	37	21	10951375	10951375	+	Silent	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE	7179	broad.mit.edu	37	21	10969921	10969921	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE	7179	broad.mit.edu	37	21	10971226	10971226	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE	7179	broad.mit.edu	37	21	10971846	10971846	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAF3IP3	80342	broad.mit.edu	37	1	209933490	209933490	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAF3IP3	80342	broad.mit.edu	37	1	209936109	209936109	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRHDE	29953	broad.mit.edu	37	12	72667430	72667430	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRHR	7201	broad.mit.edu	37	8	110099840	110099840	+	Silent	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM37	4591	broad.mit.edu	37	17	57128685	57128685	+	Nonsense_Mutation	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM48	79097	broad.mit.edu	37	11	55038012	55038012	+	3'UTR	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM56	81844	broad.mit.edu	37	7	100731029	100731029	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM56	81844	broad.mit.edu	37	7	100732256	100732256	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM58	25893	broad.mit.edu	37	1	248027963	248027963	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM58	25893	broad.mit.edu	37	1	248031183	248031183	+	Intron	DEL	C	-	-			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM63	84676	broad.mit.edu	37	1	26392931	26392931	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM68	55128	broad.mit.edu	37	11	4622416	4622416	+	Intron	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM9	114088	broad.mit.edu	37	14	51446110	51446110	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIML1	339976	broad.mit.edu	37	4	189061091	189061091	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TROAP	10024	broad.mit.edu	37	12	49724561	49724561	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM1	4308	broad.mit.edu	37	15	31357178	31357178	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM2	7226	broad.mit.edu	37	21	45860560	45860560	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPV2	51393	broad.mit.edu	37	17	16321156	16321156	+	Silent	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPV6	55503	broad.mit.edu	37	7	142574821	142574821	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRRAP	8295	broad.mit.edu	37	7	98519430	98519430	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRRAP	8295	broad.mit.edu	37	7	98545838	98545838	+	Intron	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRYX3	136541	broad.mit.edu	37	7	141954779	141954779	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSC22D2	9819	broad.mit.edu	37	3	150128499	150128499	+	Silent	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSEN34	79042	broad.mit.edu	37	19	54695493	54695493	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSHR	7253	broad.mit.edu	37	14	81609497	81609497	+	Frame_Shift_Del	DEL	T	-	-			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSHZ3	57616	broad.mit.edu	37	19	31767851	31767851	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSHZ3	57616	broad.mit.edu	37	19	31769071	31769071	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSKU	25987	broad.mit.edu	37	11	76507338	76507338	+	Silent	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSNARE1	203062	broad.mit.edu	37	8	143365769	143365769	+	Intron	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSNAXIP1	55815	broad.mit.edu	37	16	67860159	67860159	+	Silent	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSPAN16	26526	broad.mit.edu	37	19	11408976	11408976	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSPAN19	144448	broad.mit.edu	37	12	85413375	85413375	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSPAN8	7103	broad.mit.edu	37	12	71519258	71519258	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC18	118491	broad.mit.edu	37	10	75082643	75082643	+	Intron	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC21A	199223	broad.mit.edu	37	3	39162666	39162667	+	Missense_Mutation	DNP	TG	AT	AT			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC25	83538	broad.mit.edu	37	17	40091399	40091399	+	Intron	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC39A	22996	broad.mit.edu	37	1	51760290	51760290	+	Intron	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTLL5	23093	broad.mit.edu	37	14	76243078	76243078	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTLL8	164714	broad.mit.edu	37	22	50479677	50479677	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTL	150465	broad.mit.edu	37	2	113277759	113277759	+	Intron	SNP	A	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179418213	179418213	+	Intron	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179440902	179440902	+	Silent	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179440974	179440974	+	Silent	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179567309	179567309	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179588867	179588867	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179613916	179613916	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179615786	179615786	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTYH3	80727	broad.mit.edu	37	7	2698689	2698689	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBA1A	7846	broad.mit.edu	37	12	49579227	49579227	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBA4A	7277	broad.mit.edu	37	2	220116417	220116417	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBGCP5	114791	broad.mit.edu	37	15	22849092	22849092	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TWISTNB	221830	broad.mit.edu	37	7	19748721	19748721	+	5'Flank	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TXK	7294	broad.mit.edu	37	4	48088373	48088373	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TXN2	25828	broad.mit.edu	37	22	36876547	36876547	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TXNDC2	84203	broad.mit.edu	37	18	9887023	9887024	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TYRP1	7306	broad.mit.edu	37	9	12694303	12694303	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TYR	7299	broad.mit.edu	37	11	88924513	88924513	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBA6	55236	broad.mit.edu	37	4	68512442	68512442	+	Missense_Mutation	SNP	C	G	G	rs140068938		TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBAP2L	9898	broad.mit.edu	37	1	154224000	154224000	+	Nonsense_Mutation	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE2O	63893	broad.mit.edu	37	17	74398726	74398726	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE2Q1	55585	broad.mit.edu	37	1	154524037	154524037	+	Intron	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE2R2	54926	broad.mit.edu	37	9	33917170	33917170	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE3B	89910	broad.mit.edu	37	12	109921601	109921601	+	Intron	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE3C	9690	broad.mit.edu	37	7	156971381	156971381	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE3C	9690	broad.mit.edu	37	7	156991052	156991052	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR2	23304	broad.mit.edu	37	6	42600433	42600433	+	Silent	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR2	23304	broad.mit.edu	37	6	42626593	42626593	+	Intron	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR4	23352	broad.mit.edu	37	1	19432994	19432994	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR4	23352	broad.mit.edu	37	1	19470605	19470605	+	Intron	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR5	51366	broad.mit.edu	37	8	103293805	103293805	+	Intron	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR7	55148	broad.mit.edu	37	14	93673492	93673492	+	5'UTR	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBTD2	92181	broad.mit.edu	37	5	171682508	171682508	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UCMA	221044	broad.mit.edu	37	10	13275671	13275671	+	Intron	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B4	7363	broad.mit.edu	37	4	70346519	70346519	+	Missense_Mutation	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B4	7363	broad.mit.edu	37	4	70346553	70346553	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ULK1	8408	broad.mit.edu	37	12	132405810	132405810	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ULK1	8408	broad.mit.edu	37	12	132406036	132406055	+	3'UTR	DEL	ACAGTCAGCCTGCCGGCCTC	-	-			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UMPS	7372	broad.mit.edu	37	3	124453975	124453975	+	Silent	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC119	9094	broad.mit.edu	37	17	26874688	26874688	+	Intron	SNP	C	A	A	rs148433825		TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC45B	146862	broad.mit.edu	37	17	33477307	33477307	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC45B	146862	broad.mit.edu	37	17	33479761	33479762	+	Intron	DNP	TC	CA	CA			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UQCRC2	7385	broad.mit.edu	37	16	21994458	21994459	+	Frame_Shift_Ins	INS	-	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
URGCP	55665	broad.mit.edu	37	7	43918845	43918845	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USF1	7391	broad.mit.edu	37	1	161009949	161009949	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH1C	10083	broad.mit.edu	37	11	17552585	17552585	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	215807871	215807871	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	215901708	215901708	+	Silent	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	215972391	215972391	+	Silent	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216166501	216166502	+	Frame_Shift_Del	DEL	TG	-	-			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216420298	216420298	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216498839	216498839	+	Silent	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP15	9958	broad.mit.edu	37	12	62696501	62696501	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP29	57663	broad.mit.edu	37	19	57640672	57640672	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP29	57663	broad.mit.edu	37	19	57642509	57642509	+	Silent	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP31	57478	broad.mit.edu	37	16	23119414	23119414	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP39	10713	broad.mit.edu	37	2	85836453	85836453	+	Intron	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP40	55230	broad.mit.edu	37	2	234463045	234463045	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP48	84196	broad.mit.edu	37	1	22056275	22056275	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP6	9098	broad.mit.edu	37	17	5039031	5039031	+	Intron	SNP	T	C	C	rs138606900	by1000genomes	TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USPL1	10208	broad.mit.edu	37	13	31221140	31221140	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTRN	7402	broad.mit.edu	37	6	144843387	144843387	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UVRAG	7405	broad.mit.edu	37	11	75718610	75718610	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	28725710	28725710	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	37627540	37627540	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	38536928	38536928	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	39006485	39006485	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	39011250	39011250	+	IGR	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	52444072	52444072	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	52445258	52445258	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	52445886	52445886	+	IGR	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	54171016	54171016	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	54172681	54172681	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	81651918	81651918	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	8556404	8556404	+	IGR	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	98510237	98510237	+	IGR	SNP	A	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	123847395	123847395	+	IGR	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	125937607	125937607	+	IGR	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	18893492	18893492	+	IGR	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	23426163	23426163	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	4231594	4231594	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	47927119	47927119	+	IGR	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49090387	49090387	+	IGR	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	50149427	50149427	+	IGR	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	50228187	50228187	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	51483837	51483837	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55783428	55783428	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	59299639	59299639	+	IGR	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	6067319	6067319	+	IGR	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	74782873	74782873	+	IGR	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	79699948	79699948	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	10145638	10145638	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	10264579	10264579	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	110073387	110073387	+	IGR	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	129501339	129501339	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	22161695	22161695	+	IGR	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	31908010	31908010	+	IGR	SNP	T	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	32101519	32101519	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	37938465	37938465	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	38596056	38596056	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	38596840	38596840	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	43965351	43965351	+	IGR	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	47986996	47986996	+	IGR	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	75057950	75057950	+	IGR	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	8789949	8789949	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	88177017	88177017	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	96454188	96454188	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	111605148	111605148	+	IGR	SNP	A	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	19468119	19468119	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	19956643	19956643	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	24983249	24983249	+	IGR	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	37512944	37512944	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	45169504	45169504	+	IGR	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	86927824	86927824	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	86928169	86928169	+	IGR	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	86928928	86928928	+	IGR	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	19500193	19500193	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	19807009	19807009	+	IGR	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20097194	20097194	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20137062	20137062	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	23021102	23021102	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	29142492	29142492	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	43744737	43744737	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	43769786	43769786	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	44010458	44010458	+	IGR	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	44546984	44546984	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	45332167	45332167	+	IGR	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	52223813	52223813	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	54458313	54458313	+	IGR	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	62331564	62331564	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	63590206	63590206	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	65067235	65067235	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	20148592	20148592	+	IGR	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	20170187	20170187	+	IGR	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	20481948	20481948	+	IGR	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	20481981	20481981	+	IGR	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	28702765	28702765	+	IGR	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	60345673	60345673	+	IGR	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	27145537	27145537	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	27146342	27146342	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	31963689	31963689	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32077748	32077748	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32169246	32169246	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32177188	32177188	+	IGR	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32350875	32350875	+	IGR	SNP	C	A	A	rs138715649	by1000genomes	TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32399591	32399591	+	IGR	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32403233	32403233	+	IGR	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32490077	32490077	+	IGR	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33021039	33021039	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33379930	33379930	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33380251	33380251	+	IGR	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33390482	33390482	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33408567	33408567	+	IGR	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33412758	33412758	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33424971	33424971	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33490517	33490517	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33499051	33499051	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33629897	33629897	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33647176	33647176	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33647271	33647271	+	IGR	DEL	G	-	-			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33741144	33741144	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	34326363	34326363	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	34581814	34581814	+	IGR	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	59122979	59122979	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	60391321	60391321	+	IGR	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	78083359	78083359	+	IGR	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	81912	81912	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	82468616	82468617	+	IGR	DNP	GG	AT	AT			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	18301834	18301834	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	20418010	20418010	+	IGR	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	21827697	21827697	+	IGR	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	25991590	25991590	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	27348697	27348697	+	IGR	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	29377116	29377116	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	30439322	30439322	+	IGR	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	39369082	39369082	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	51513032	51513032	+	IGR	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	51513216	51513216	+	IGR	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	51834533	51834533	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	60324561	60324561	+	IGR	SNP	T	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	76481769	76481769	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	14221341	14221341	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	14377518	14377518	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	14613406	14613406	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	14630680	14630680	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	14631977	14631977	+	IGR	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	14890042	14890042	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	75147240	75147240	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	16013624	16013624	+	IGR	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	16013825	16013825	+	IGR	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	19971912	19971912	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	21751997	21751997	+	IGR	SNP	A	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	22398474	22398474	+	IGR	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	22790772	22790772	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	23158588	23158588	+	IGR	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	35033881	35033881	+	IGR	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	44968422	44968422	+	IGR	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	44975793	44975793	+	IGR	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	51322346	51322346	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	51430265	51430265	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	51499114	51499114	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	53020396	53020396	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	54278895	54278895	+	IGR	SNP	A	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	105977511	105977511	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	106434486	106434486	+	IGR	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	106435176	106435176	+	IGR	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	109045340	109045340	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	148903085	148903085	+	IGR	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	148903768	148903768	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149047022	149047022	+	IGR	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149050512	149050512	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149091711	149091711	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149102777	149102777	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	151923067	151923067	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	157679542	157679542	+	IGR	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	158694495	158694495	+	IGR	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	164326232	164326232	+	IGR	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	166717168	166717168	+	IGR	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	175013849	175013849	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	177529181	177529181	+	IGR	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	189960574	189960574	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	202009039	202009039	+	IGR	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	220488220	220488220	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	241995904	241995904	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	248570538	248570538	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	55003318	55003318	+	IGR	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	63826592	63826592	+	IGR	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	79215256	79215256	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	79521622	79521622	+	IGR	SNP	A	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	80917341	80917341	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	87250621	87250621	+	IGR	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	10367391	10367391	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	29873858	29873858	+	IGR	DEL	G	-	-			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	32552980	32552981	+	IGR	INS	-	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	40626548	40626548	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	10899204	10899205	+	IGR	DNP	AG	CT	CT			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	11181082	11181082	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	11181322	11181322	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	11181554	11181554	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	11181575	11181575	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	11181767	11181767	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	11181783	11181783	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	14798628	14798628	+	IGR	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	14899489	14899489	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	15385905	15385905	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	16129966	16129966	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	16130165	16130165	+	IGR	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	21798174	21798174	+	IGR	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	24474899	24474899	+	IGR	SNP	T	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	28516076	28516076	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	30275627	30275627	+	IGR	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	31809221	31809221	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	32119233	32119233	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	37503147	37503147	+	IGR	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	16348333	16348333	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	16366230	16366230	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	16415349	16415349	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	16868603	16868603	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	17339526	17339526	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	21424085	21424085	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	27283495	27283495	+	IGR	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	106961271	106961271	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	129276599	129276599	+	IGR	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	130893567	130893567	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	130988091	130988091	+	IGR	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	132349551	132349551	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	132384153	132384153	+	IGR	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	154277169	154277169	+	IGR	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	17036422	17036422	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	170623735	170623735	+	IGR	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	17466104	17466104	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	17566553	17566553	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	181737990	181737990	+	IGR	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	194994580	194994580	+	IGR	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	20729215	20729215	+	IGR	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	222808920	222808920	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	33862459	33862459	+	IGR	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	41497	41497	+	IGR	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	43053735	43053735	+	IGR	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	81428132	81428132	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	83084069	83084069	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91893835	91893835	+	IGR	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91893869	91893869	+	IGR	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	92145535	92145535	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	95400948	95400948	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	96789457	96789458	+	IGR	DNP	CC	AA	AA			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	137599174	137599174	+	IGR	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	141443240	141443240	+	IGR	SNP	A	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	147885033	147885033	+	IGR	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	148703880	148703880	+	IGR	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	148704527	148704527	+	IGR	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	152846977	152846977	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	175695451	175695451	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	180041450	180041450	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	183606078	183606078	+	IGR	SNP	T	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	186617868	186617868	+	IGR	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	191382903	191382903	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	192873909	192873909	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	192874406	192874406	+	IGR	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	68683096	68683096	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	72927055	72927055	+	IGR	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	74185667	74185667	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	75378133	75378133	+	IGR	SNP	T	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	82856675	82856675	+	IGR	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	109709834	109709834	+	IGR	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	116842578	116842579	+	IGR	DNP	CC	AA	AA			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	165865180	165865180	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	170712645	170712645	+	IGR	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	189309281	189309281	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	43589772	43589772	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	65296998	65296998	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	66959857	66959857	+	IGR	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	70108799	70108799	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	9388884	9388884	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	105752354	105752354	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	105752407	105752408	+	IGR	INS	-	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	108784693	108784693	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	116052035	116052035	+	IGR	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	117115248	117115248	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	141276153	141276153	+	IGR	SNP	A	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	14640039	14640039	+	IGR	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	153939585	153939585	+	IGR	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	154871004	154871005	+	IGR	DNP	CG	TT	TT			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	161178734	161178734	+	IGR	DEL	T	-	-			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	165809353	165809353	+	IGR	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	168043933	168043933	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	168044027	168044027	+	IGR	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	177593323	177593323	+	IGR	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	179366801	179366801	+	IGR	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	20304405	20304405	+	IGR	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	25910186	25910186	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	32524123	32524123	+	IGR	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	75207736	75207736	+	IGR	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	84760564	84760564	+	IGR	DEL	C	-	-			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	97912335	97912335	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	104466793	104466793	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	161326702	161326702	+	IGR	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	168688192	168688192	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	19614230	19614230	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	25882430	25882430	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	34157952	34157952	+	IGR	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	48182020	48182020	+	IGR	SNP	A	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	51275232	51275232	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	51275395	51275395	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	66804213	66804213	+	IGR	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	85998674	85998674	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	92525698	92525698	+	IGR	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	95153269	95153269	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	131346714	131346714	+	IGR	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	150311727	150311727	+	IGR	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	150311729	150311729	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	20629248	20629248	+	IGR	SNP	A	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	53930313	53930313	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	55003808	55003808	+	IGR	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	55004375	55004375	+	IGR	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	56665786	56665786	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	57215664	57215664	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	57216766	57216766	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	57877723	57877723	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	61820333	61820333	+	IGR	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	62669760	62669760	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63020543	63020543	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63032667	63032667	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63476077	63476077	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63894280	63894280	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	64030456	64030456	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	64030464	64030464	+	IGR	DEL	G	-	-			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	64196848	64196849	+	IGR	DNP	GG	TT	TT			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	66071828	66071828	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	75730766	75730766	+	IGR	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	87031351	87031351	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	9766843	9766843	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	9767670	9767670	+	IGR	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	99594740	99594740	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	138709056	138709056	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	53358300	53358300	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	63055889	63055889	+	IGR	DEL	C	-	-			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	6940701	6940701	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	74897038	74897038	+	IGR	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	83204052	83204052	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	85861035	85861035	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	88801404	88801404	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	88801460	88801460	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	94986738	94986738	+	IGR	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	98250830	98250830	+	IGR	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	103494057	103494057	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	109932085	109932085	+	IGR	SNP	C	G	G	rs115181008	by1000genomes	TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	114100053	114100053	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	30773759	30773759	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	30773774	30773774	+	IGR	SNP	A	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	31253934	31253935	+	IGR	DNP	CC	AA	AA			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	31254348	31254348	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	31254609	31254609	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	43426631	43426631	+	IGR	SNP	T	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	44076485	44076485	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	44174390	44174390	+	IGR	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	44175368	44175368	+	IGR	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	44789681	44789681	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	68357252	68357252	+	IGR	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	68371934	68371934	+	IGR	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	7477514	7477514	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	81652615	81652615	+	IGR	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	90425634	90425634	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	90447650	90447650	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	110864340	110864340	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	1314808	1314808	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	26179133	26179133	+	IGR	DEL	C	-	-			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	53785561	53785561	+	IGR	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	54851367	54851367	+	IGR	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	57704067	57704067	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	62103858	62103858	+	IGR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	63265073	63265073	+	IGR	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	65718189	65718189	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	73618273	73618273	+	IGR	SNP	A	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	79830132	79830132	+	IGR	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	87351476	87351476	+	IGR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	99405012	99405012	+	IGR	SNP	A	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VANGL2	57216	broad.mit.edu	37	1	160388710	160388710	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VCAM1	7412	broad.mit.edu	37	1	101197151	101197151	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VCAN	1462	broad.mit.edu	37	5	82836773	82836773	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VCAN	1462	broad.mit.edu	37	5	82837228	82837228	+	Silent	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VCAN	1462	broad.mit.edu	37	5	82837640	82837640	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VCAN	1462	broad.mit.edu	37	5	82849281	82849281	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VCP	7415	broad.mit.edu	37	9	35062999	35062999	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VIL1	7429	broad.mit.edu	37	2	219296838	219296838	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VIM	7431	broad.mit.edu	37	10	17277926	17277926	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VLDLR	7436	broad.mit.edu	37	9	2650283	2650283	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13B	157680	broad.mit.edu	37	8	100352770	100352770	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13D	55187	broad.mit.edu	37	1	12439508	12439508	+	Intron	DEL	G	-	-			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VSTM1	284415	broad.mit.edu	37	19	54554659	54554659	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDFY3	23001	broad.mit.edu	37	4	85617181	85617181	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDFY3	23001	broad.mit.edu	37	4	85742232	85742232	+	Intron	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR35	57539	broad.mit.edu	37	2	20178355	20178355	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR41	55255	broad.mit.edu	37	5	76749729	76749729	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR52	55779	broad.mit.edu	37	3	113127924	113127924	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR59	79726	broad.mit.edu	37	16	74908369	74908369	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR59	79726	broad.mit.edu	37	16	74951953	74951953	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR62	284403	broad.mit.edu	37	19	36582440	36582440	+	Intron	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR75	84128	broad.mit.edu	37	2	190316657	190316657	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR88	126248	broad.mit.edu	37	19	33655338	33655338	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR91	29062	broad.mit.edu	37	7	134873250	134873250	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WSCD2	9671	broad.mit.edu	37	12	108641767	108641767	+	Splice_Site	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WWC3	55841	broad.mit.edu	37	X	10078060	10078060	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WWC3	55841	broad.mit.edu	37	X	10096092	10096092	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WWC3	55841	broad.mit.edu	37	X	10098192	10098192	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XCL2	6846	broad.mit.edu	37	1	168510386	168510386	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XG	7499	broad.mit.edu	37	X	2688516	2688516	+	Intron	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XG	7499	broad.mit.edu	37	X	2729347	2729347	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIRP1	165904	broad.mit.edu	37	3	39227262	39227262	+	Silent	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIRP2	129446	broad.mit.edu	37	2	168100897	168100897	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XKR6	286046	broad.mit.edu	37	8	10755411	10755411	+	3'UTR	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XYLT1	64131	broad.mit.edu	37	16	17291967	17291967	+	Intron	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YEATS2	55689	broad.mit.edu	37	3	183435415	183435415	+	Intron	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YME1L1	10730	broad.mit.edu	37	10	27400900	27400900	+	3'UTR	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZAN	7455	broad.mit.edu	37	7	100336099	100336099	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB16	7704	broad.mit.edu	37	11	113934732	113934732	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB20	26137	broad.mit.edu	37	3	114069770	114069770	+	Silent	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3H12C	85463	broad.mit.edu	37	11	110023660	110023660	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3H12C	85463	broad.mit.edu	37	11	110036179	110036179	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3H14	79882	broad.mit.edu	37	14	89073594	89073594	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3H3	23144	broad.mit.edu	37	8	144621345	144621345	+	Silent	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC4H2	55906	broad.mit.edu	37	X	64138864	64138864	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZCCHC16	340595	broad.mit.edu	37	X	111624967	111624967	+	Intron	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZCWPW2	152098	broad.mit.edu	37	3	28489434	28489434	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZDHHC18	84243	broad.mit.edu	37	1	27159202	27159202	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZEB2	9839	broad.mit.edu	37	2	145156600	145156600	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZEB2	9839	broad.mit.edu	37	2	145157187	145157187	+	Missense_Mutation	SNP	T	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZEB2	9839	broad.mit.edu	37	2	145187523	145187523	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX4	79776	broad.mit.edu	37	8	77616672	77616672	+	Missense_Mutation	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX4	79776	broad.mit.edu	37	8	77745557	77745557	+	Intron	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX4	79776	broad.mit.edu	37	8	77765475	77765475	+	Silent	SNP	T	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFP57	346171	broad.mit.edu	37	6	29640985	29640985	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFPM2	23414	broad.mit.edu	37	8	106573666	106573666	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZHX1	11244	broad.mit.edu	37	8	124266202	124266202	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZIM3	114026	broad.mit.edu	37	19	57646288	57646288	+	Nonstop_Mutation	SNP	A	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZIM3	114026	broad.mit.edu	37	19	57648334	57648334	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMYND17	118490	broad.mit.edu	37	10	75182482	75182482	+	3'UTR	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF154	7710	broad.mit.edu	37	19	58213094	58213094	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF185	7739	broad.mit.edu	37	X	152087479	152087479	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF18	7566	broad.mit.edu	37	17	11882103	11882103	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF205	7755	broad.mit.edu	37	16	3169232	3169232	+	Intron	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF208	7757	broad.mit.edu	37	19	22154800	22154800	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF224	7767	broad.mit.edu	37	19	44599279	44599279	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF229	7772	broad.mit.edu	37	19	44933603	44933603	+	Silent	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF236	7776	broad.mit.edu	37	18	74606827	74606827	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF238	10472	broad.mit.edu	37	1	244217639	244217639	+	Missense_Mutation	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF251	90987	broad.mit.edu	37	8	145979533	145979533	+	Intron	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF268	10795	broad.mit.edu	37	12	133768117	133768117	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF273	10793	broad.mit.edu	37	7	64388164	64388164	+	Missense_Mutation	SNP	C	T	T	rs148564376	byFrequency	TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF273	10793	broad.mit.edu	37	7	64388706	64388706	+	Missense_Mutation	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF37A	7587	broad.mit.edu	37	10	38385625	38385625	+	Intron	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF385D	79750	broad.mit.edu	37	3	21467159	21467159	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF423	23090	broad.mit.edu	37	16	49525138	49525138	+	3'UTR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF423	23090	broad.mit.edu	37	16	49670403	49670403	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF423	23090	broad.mit.edu	37	16	49671148	49671148	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF438	220929	broad.mit.edu	37	10	31137881	31137881	+	Missense_Mutation	SNP	T	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF442	79973	broad.mit.edu	37	19	12460729	12460729	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF479	90827	broad.mit.edu	37	7	57188238	57188238	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF479	90827	broad.mit.edu	37	7	57194289	57194289	+	Intron	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF492	57615	broad.mit.edu	37	19	22836001	22836001	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF492	57615	broad.mit.edu	37	19	22836712	22836712	+	Intron	SNP	A	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF496	84838	broad.mit.edu	37	1	247492745	247492745	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF521	25925	broad.mit.edu	37	18	22804827	22804827	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF521	25925	broad.mit.edu	37	18	22805773	22805773	+	Silent	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF521	25925	broad.mit.edu	37	18	22805845	22805845	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF532	55205	broad.mit.edu	37	18	56586482	56586482	+	Silent	SNP	C	T	T	rs149812809		TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF536	9745	broad.mit.edu	37	19	30934952	30934952	+	Silent	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF536	9745	broad.mit.edu	37	19	31041611	31041611	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF558	148156	broad.mit.edu	37	19	8922189	8922190	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF559	84527	broad.mit.edu	37	19	9449202	9449202	+	5'UTR	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF560	147741	broad.mit.edu	37	19	9578134	9578134	+	Missense_Mutation	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF598	90850	broad.mit.edu	37	16	2049685	2049685	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF645	158506	broad.mit.edu	37	X	22290996	22290996	+	5'Flank	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF676	163223	broad.mit.edu	37	19	22379329	22379329	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF677	342926	broad.mit.edu	37	19	53747151	53747151	+	Splice_Site	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF679	168417	broad.mit.edu	37	7	63726798	63726798	+	Missense_Mutation	SNP	A	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF680	340252	broad.mit.edu	37	7	64004766	64004766	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF681	148213	broad.mit.edu	37	19	23926566	23926566	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF699	374879	broad.mit.edu	37	19	9407298	9407298	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF700	90592	broad.mit.edu	37	19	12060377	12060377	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF716	441234	broad.mit.edu	37	7	57522349	57522349	+	Intron	SNP	A	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF76	7629	broad.mit.edu	37	6	35260642	35260642	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF773	374928	broad.mit.edu	37	19	58016876	58016876	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF804A	91752	broad.mit.edu	37	2	185801843	185801843	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF804B	219578	broad.mit.edu	37	7	88963101	88963101	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF80	7634	broad.mit.edu	37	3	113955203	113955203	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF835	90485	broad.mit.edu	37	19	57184254	57184254	+	5'Flank	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZPLD1	131368	broad.mit.edu	37	3	102181120	102181120	+	Intron	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZPLD1	131368	broad.mit.edu	37	3	102189322	102189322	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSCAN1	284312	broad.mit.edu	37	19	58564632	58564632	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSWIM2	151112	broad.mit.edu	37	2	187694605	187694605	+	Missense_Mutation	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZZEF1	23140	broad.mit.edu	37	17	3917899	3917899	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZZEF1	23140	broad.mit.edu	37	17	3954271	3954271	+	Missense_Mutation	SNP	C	G	G	rs79012370	by1000genomes	TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZZZ3	26009	broad.mit.edu	37	1	78098394	78098394	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	134659761	134659761	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	49313231	49313231	+	RNA	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	31099509	31099509	+	Intron	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55065819	55065819	+	5'Flank	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	31300824	31300824	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	8050907	8050907	+	Missense_Mutation	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	95411282	95411282	+	5'Flank	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	19904202	19904202	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22205310	22205310	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22219312	22219312	+	Intron	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22392947	22392947	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22466369	22466369	+	Intron	SNP	G	C	C	rs138258262	by1000genomes	TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22509307	22509307	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22955211	22955211	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22970681	22970681	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	102292013	102292013	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	102315706	102315706	+	5'Flank	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	20193384	20193384	+	5'Flank	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	23609422	23609422	+	5'Flank	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	25487050	25487050	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32077595	32077595	+	RNA	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	25749580	25749580	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	78237608	78237608	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	22785375	22785375	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	23414119	23414119	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	24097758	24097758	+	RNA	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	24102947	24102947	+	RNA	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	35316486	35316486	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	146466101	146466101	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	159410599	159410599	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	179557263	179557263	+	5'Flank	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	211381098	211381098	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	227598335	227598335	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89161140	89161140	+	Splice_Site	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89319503	89319503	+	Intron	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89345441	89345441	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89428284	89428284	+	Intron	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89459364	89459364	+	RNA	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89459449	89459449	+	RNA	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89534264	89534264	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89544388	89544388	+	RNA	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89952840	89952840	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89967293	89967293	+	Intron	DEL	A	-	-			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89976523	89976523	+	Intron	SNP	C	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90091854	90091854	+	Intron	SNP	A	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90139366	90139367	+	RNA	DNP	GG	CT	CT			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90211796	90211796	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	129140308	129140308	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	180538666	180538666	+	Intron	SNP	T	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	135249610	135249610	+	5'Flank	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	69334628	69334628	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	100553191	100553191	+	Intron	SNP	C	G	G			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142231632	142231632	+	Intron	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142471328	142471328	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	38380318	38380318	+	5'Flank	SNP	A	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	30209576	30209576	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	43915835	43915835	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	66517446	66517446	+	Intron	SNP	G	A	A			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	90746863	90746863	+	Silent	SNP	G	C	C			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	90749712	90749712	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	80185805	80185806	+	Missense_Mutation	DNP	CT	AG	AG			TCGA-44-3918-01A-01D-1105-08	TCGA-44-3918-11A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
