Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
ABCA10	10349	broad.mit.edu	37	17	67148714	67148714	+	Intron	SNP	T	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA9	10350	broad.mit.edu	37	17	67014530	67014530	+	Intron	SNP	G	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB1	5243	broad.mit.edu	37	7	87133638	87133638	+	Missense_Mutation	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC9	10060	broad.mit.edu	37	12	21998656	21998656	+	Missense_Mutation	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACCN4	55515	broad.mit.edu	37	2	220396524	220396524	+	Silent	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACO1	48	broad.mit.edu	37	9	32408496	32408496	+	Intron	DEL	C	-	-	rs10123372	by1000genomes	TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM2A	123876	broad.mit.edu	37	16	20482661	20482661	+	Intron	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM2A	123876	broad.mit.edu	37	16	20488798	20488798	+	Intron	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM5	54988	broad.mit.edu	37	16	20429494	20429494	+	Silent	SNP	G	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM19	8728	broad.mit.edu	37	5	156940420	156940420	+	Intron	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM23	8745	broad.mit.edu	37	2	207452814	207452814	+	Splice_Site	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106829896	106829896	+	RNA	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	107136505	107136505	+	Intron	SNP	C	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM7	8756	broad.mit.edu	37	8	24342845	24342845	+	Missense_Mutation	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS17	170691	broad.mit.edu	37	15	100739504	100739504	+	Intron	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS17	170691	broad.mit.edu	37	15	100801699	100801699	+	Missense_Mutation	SNP	G	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS20	80070	broad.mit.edu	37	12	43840391	43840391	+	Intron	SNP	A	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS2	9509	broad.mit.edu	37	5	178541268	178541268	+	Missense_Mutation	SNP	T	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFF2	2334	broad.mit.edu	37	X	148038041	148038041	+	Silent	SNP	A	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGBL5	60509	broad.mit.edu	37	2	27292958	27292958	+	Splice_Site	SNP	A	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHCTF1	25909	broad.mit.edu	37	1	247020947	247020947	+	Intron	SNP	T	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHCTF1	25909	broad.mit.edu	37	1	247068777	247068777	+	Intron	SNP	C	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK2	113146	broad.mit.edu	37	14	105418880	105418880	+	Missense_Mutation	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMIGO1	57463	broad.mit.edu	37	1	110050444	110050444	+	Missense_Mutation	SNP	T	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD20B	729171	broad.mit.edu	37	2	95488865	95488865	+	Intron	SNP	T	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD30B	374860	broad.mit.edu	37	18	14852116	14852116	+	Missense_Mutation	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO4	121601	broad.mit.edu	37	12	101433897	101433897	+	Intron	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APCS	325	broad.mit.edu	37	1	159557666	159557666	+	5'UTR	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AQPEP	206338	broad.mit.edu	37	5	115336424	115336424	+	Intron	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARFGAP1	55738	broad.mit.edu	37	20	61910347	61910347	+	Silent	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP19	84986	broad.mit.edu	37	10	98985923	98985923	+	Intron	SNP	G	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF10L	55160	broad.mit.edu	37	1	17991008	17991008	+	Missense_Mutation	SNP	C	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF38	54848	broad.mit.edu	37	4	106534548	106534549	+	Frame_Shift_Ins	INS	-	TATC	TATC			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARL14	80117	broad.mit.edu	37	3	160395577	160395577	+	Missense_Mutation	SNP	A	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASAH1	427	broad.mit.edu	37	8	17942257	17942257	+	5'Flank	SNP	G	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASAH2B	653308	broad.mit.edu	37	10	52502843	52502843	+	Intron	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASAP2	8853	broad.mit.edu	37	2	9540191	9540191	+	Silent	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASCC3	10973	broad.mit.edu	37	6	101315740	101315740	+	Intron	SNP	G	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASPM	259266	broad.mit.edu	37	1	197059495	197059495	+	Missense_Mutation	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASPM	259266	broad.mit.edu	37	1	197097545	197097545	+	Intron	SNP	A	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASPM	259266	broad.mit.edu	37	1	197112565	197112565	+	Nonsense_Mutation	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN2	23245	broad.mit.edu	37	9	119976834	119976834	+	Missense_Mutation	SNP	A	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASXL3	80816	broad.mit.edu	37	18	31323961	31323961	+	Silent	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATG2A	23130	broad.mit.edu	37	11	64678617	64678617	+	Silent	SNP	C	A	A	rs151243555		TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATG2B	55102	broad.mit.edu	37	14	96756049	96756049	+	Missense_Mutation	SNP	G	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATG2B	55102	broad.mit.edu	37	14	96791902	96791902	+	Intron	SNP	T	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP10B	23120	broad.mit.edu	37	5	160026025	160026025	+	Intron	SNP	G	T	T	rs17480493	by1000genomes	TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP10B	23120	broad.mit.edu	37	5	160061467	160061467	+	Silent	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP10D	57205	broad.mit.edu	37	4	47517444	47517444	+	Intron	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP13A2	23400	broad.mit.edu	37	1	17331296	17331296	+	Missense_Mutation	SNP	G	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1A4	480	broad.mit.edu	37	1	160125911	160125911	+	Missense_Mutation	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2B2	491	broad.mit.edu	37	3	10444022	10444022	+	Silent	SNP	C	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6V1C2	245973	broad.mit.edu	37	2	10917755	10917755	+	Silent	SNP	G	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATXN1	6310	broad.mit.edu	37	6	16328216	16328216	+	Missense_Mutation	SNP	G	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AVL9	23080	broad.mit.edu	37	7	33066410	33066410	+	Intron	SNP	C	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAGE2	85319	broad.mit.edu	37	21	11026837	11026837	+	3'UTR	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAI1	575	broad.mit.edu	37	8	143559682	143559682	+	Missense_Mutation	SNP	T	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCKDHB	594	broad.mit.edu	37	6	80838877	80838877	+	Splice_Site	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BOD1L	259282	broad.mit.edu	37	4	13588025	13588025	+	Missense_Mutation	SNP	T	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRCA1	672	broad.mit.edu	37	17	41251814	41251814	+	Missense_Mutation	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRWD3	254065	broad.mit.edu	37	X	79951398	79951398	+	Intron	SNP	T	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BSND	7809	broad.mit.edu	37	1	55472787	55472787	+	Silent	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BSN	8927	broad.mit.edu	37	3	49699759	49699759	+	Missense_Mutation	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTN1A1	696	broad.mit.edu	37	6	26506762	26506762	+	Intron	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTNL3	10917	broad.mit.edu	37	5	180419856	180419856	+	Missense_Mutation	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BZRAP1	9256	broad.mit.edu	37	17	56382393	56382393	+	Intron	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf9	745	broad.mit.edu	37	11	61541490	61541490	+	Silent	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C13orf33	84935	broad.mit.edu	37	13	31498411	31498411	+	Intron	SNP	G	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf168	199920	broad.mit.edu	37	1	57185676	57185676	+	Intron	SNP	A	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf173	127254	broad.mit.edu	37	1	75065247	75065247	+	Intron	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf173	127254	broad.mit.edu	37	1	75086594	75086594	+	Nonsense_Mutation	SNP	G	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf69	200205	broad.mit.edu	37	1	228362874	228362874	+	Missense_Mutation	SNP	A	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf103	24141	broad.mit.edu	37	20	9496758	9496758	+	Missense_Mutation	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf200	253868	broad.mit.edu	37	20	61143917	61143917	+	5'UTR	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C21orf56	84221	broad.mit.edu	37	21	47581632	47581632	+	Intron	SNP	C	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C22orf25	128989	broad.mit.edu	37	22	20030990	20030990	+	Intron	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C22orf43	51233	broad.mit.edu	37	22	23961586	23961586	+	Intron	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf47	79568	broad.mit.edu	37	2	200824646	200824646	+	Intron	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf66	401027	broad.mit.edu	37	2	197674027	197674027	+	Missense_Mutation	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf32	51066	broad.mit.edu	37	3	8675687	8675687	+	Intron	SNP	G	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6	729	broad.mit.edu	37	5	41142965	41142965	+	Missense_Mutation	SNP	T	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6	729	broad.mit.edu	37	5	41154096	41154096	+	Silent	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf168	84553	broad.mit.edu	37	6	99771263	99771263	+	Intron	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf53	286006	broad.mit.edu	37	7	112125071	112125071	+	Intron	SNP	G	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf58	79974	broad.mit.edu	37	7	120765938	120765938	+	Missense_Mutation	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf3	84909	broad.mit.edu	37	9	97823056	97823056	+	Silent	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf72	203228	broad.mit.edu	37	9	27558365	27558365	+	Intron	SNP	G	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CA2	760	broad.mit.edu	37	8	86385979	86385979	+	Missense_Mutation	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA2D1	781	broad.mit.edu	37	7	81667468	81667468	+	Silent	SNP	C	G	G	rs73151507	byFrequency;by1000genomes	TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CADM1	23705	broad.mit.edu	37	11	115080337	115080337	+	Silent	SNP	G	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALB1	793	broad.mit.edu	37	8	91090510	91090510	+	Intron	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CARD11	84433	broad.mit.edu	37	7	2976752	2976752	+	Missense_Mutation	SNP	C	A	A	rs112171353	byFrequency	TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASP5	838	broad.mit.edu	37	11	104878093	104878093	+	Intron	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASR	846	broad.mit.edu	37	3	122003983	122003983	+	Missense_Mutation	SNP	G	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CATSPERB	79820	broad.mit.edu	37	14	92058149	92058149	+	Intron	SNP	T	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CATSPERB	79820	broad.mit.edu	37	14	92074741	92074741	+	Missense_Mutation	SNP	T	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CC2D1A	54862	broad.mit.edu	37	19	14029551	14029551	+	Intron	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC158	339965	broad.mit.edu	37	4	77305770	77305770	+	Missense_Mutation	SNP	T	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC15	80071	broad.mit.edu	37	11	124857203	124857203	+	Nonsense_Mutation	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC3	83643	broad.mit.edu	37	10	13040235	13040235	+	Intron	SNP	T	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC63	160762	broad.mit.edu	37	12	111290731	111290731	+	5'UTR	SNP	A	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCM2	83605	broad.mit.edu	37	7	45104118	45104118	+	Silent	SNP	G	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCNE1	898	broad.mit.edu	37	19	30308274	30308274	+	Intron	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD163L1	283316	broad.mit.edu	37	12	7585062	7585062	+	Missense_Mutation	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD38	952	broad.mit.edu	37	4	15839701	15839701	+	Intron	DEL	T	-	-	rs113665761		TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD84	8832	broad.mit.edu	37	1	160535531	160535531	+	Silent	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH10	1008	broad.mit.edu	37	5	24487942	24487942	+	Missense_Mutation	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH10	1008	broad.mit.edu	37	5	24498501	24498501	+	Intron	SNP	G	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH23	64072	broad.mit.edu	37	10	73490369	73490369	+	Intron	SNP	T	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH6	1004	broad.mit.edu	37	5	31294040	31294040	+	Intron	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK15	65061	broad.mit.edu	37	2	202671456	202671456	+	Silent	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEACAM19	56971	broad.mit.edu	37	19	45175887	45175887	+	Missense_Mutation	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP164	22897	broad.mit.edu	37	11	117267237	117267237	+	Intron	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFTR	1080	broad.mit.edu	37	7	117243042	117243042	+	Intron	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD5	26038	broad.mit.edu	37	1	6190214	6190214	+	Intron	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHN2	1124	broad.mit.edu	37	7	29394316	29394316	+	Intron	SNP	T	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCA4	22802	broad.mit.edu	37	1	87029468	87029468	+	Intron	SNP	T	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC10A	10462	broad.mit.edu	37	17	6981959	6981959	+	Intron	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLPX	10845	broad.mit.edu	37	15	65472568	65472568	+	Intron	SNP	A	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNKSR2	22866	broad.mit.edu	37	X	21579529	21579529	+	Intron	SNP	A	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNKSR2	22866	broad.mit.edu	37	X	21627175	21627175	+	Intron	SNP	G	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNNM1	26507	broad.mit.edu	37	10	101090479	101090479	+	Silent	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN3	5067	broad.mit.edu	37	3	74350822	74350822	+	Missense_Mutation	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN3	5067	broad.mit.edu	37	3	74350861	74350861	+	Missense_Mutation	SNP	C	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP2	26047	broad.mit.edu	37	7	147183020	147183020	+	Intron	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103444196	103444196	+	Intron	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL21A1	81578	broad.mit.edu	37	6	55932126	55932126	+	Silent	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL25A1	84570	broad.mit.edu	37	4	109971271	109971271	+	Intron	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL3A1	1281	broad.mit.edu	37	2	189870978	189870978	+	Missense_Mutation	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A5	1287	broad.mit.edu	37	X	107858176	107858177	+	Missense_Mutation	DNP	GG	TT	TT	rs104886182		TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A2	1290	broad.mit.edu	37	2	189923181	189923181	+	Missense_Mutation	SNP	C	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL6A1	1291	broad.mit.edu	37	21	47423462	47423462	+	Silent	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL7A1	1294	broad.mit.edu	37	3	48613018	48613018	+	Intron	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COLQ	8292	broad.mit.edu	37	3	15520396	15520396	+	Intron	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COPA	1314	broad.mit.edu	37	1	160260101	160260101	+	Intron	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPE	1363	broad.mit.edu	37	4	166389022	166389022	+	Intron	SNP	A	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPS1	1373	broad.mit.edu	37	2	211539587	211539587	+	Intron	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPXM2	119587	broad.mit.edu	37	10	125521558	125521558	+	Missense_Mutation	SNP	G	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPZ	8532	broad.mit.edu	37	4	8616159	8616159	+	Silent	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CR2	1380	broad.mit.edu	37	1	207649641	207649641	+	Missense_Mutation	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRB1	23418	broad.mit.edu	37	1	197390222	197390222	+	Missense_Mutation	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRCP	27297	broad.mit.edu	37	7	65610483	65610483	+	Missense_Mutation	SNP	A	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSDA	8531	broad.mit.edu	37	12	10868273	10868273	+	Intron	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	4851843	4851843	+	Intron	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113650903	113650903	+	Intron	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	114326964	114326964	+	Silent	SNP	A	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	114448956	114448956	+	Missense_Mutation	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSNK1G1	53944	broad.mit.edu	37	15	64592498	64592498	+	Intron	SNP	T	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSRNP3	80034	broad.mit.edu	37	2	166533101	166533101	+	Missense_Mutation	SNP	G	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSRNP3	80034	broad.mit.edu	37	2	166535484	166535484	+	Missense_Mutation	SNP	G	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTCFL	140690	broad.mit.edu	37	20	56099046	56099046	+	Silent	SNP	C	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNND2	1501	broad.mit.edu	37	5	10982047	10982047	+	Intron	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTRC	11330	broad.mit.edu	37	1	15772300	15772300	+	Intron	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTTNBP2	83992	broad.mit.edu	37	7	117386042	117386042	+	Intron	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTTNBP2	83992	broad.mit.edu	37	7	117417770	117417770	+	Missense_Mutation	SNP	C	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTTNBP2	83992	broad.mit.edu	37	7	117432194	117432194	+	Silent	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTTNBP2	83992	broad.mit.edu	37	7	117450774	117450774	+	Intron	SNP	G	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUBN	8029	broad.mit.edu	37	10	16942697	16942697	+	Silent	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUL7	9820	broad.mit.edu	37	6	43018826	43018826	+	Missense_Mutation	SNP	C	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP4V2	285440	broad.mit.edu	37	4	187118467	187118467	+	Intron	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAB1	1600	broad.mit.edu	37	1	58522101	58522101	+	Intron	SNP	C	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DACT1	51339	broad.mit.edu	37	14	59112610	59112610	+	Silent	SNP	A	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF8	50717	broad.mit.edu	37	1	160210208	160210208	+	Intron	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCHS2	54798	broad.mit.edu	37	4	155155900	155155900	+	Missense_Mutation	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCHS2	54798	broad.mit.edu	37	4	155155902	155155902	+	Missense_Mutation	SNP	A	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDI1	414301	broad.mit.edu	37	11	103907640	103907640	+	Missense_Mutation	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEFB110	245913	broad.mit.edu	37	6	49986946	49986946	+	Intron	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND4C	55667	broad.mit.edu	37	9	19345883	19345883	+	Intron	SNP	A	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKB	1607	broad.mit.edu	37	7	14797366	14797366	+	Intron	SNP	A	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKZ	8525	broad.mit.edu	37	11	46389247	46389247	+	Missense_Mutation	SNP	T	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DICER1	23405	broad.mit.edu	37	14	95573988	95573988	+	Missense_Mutation	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DKK2	27123	broad.mit.edu	37	4	108124803	108124803	+	Intron	SNP	G	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLK1	8788	broad.mit.edu	37	14	101198328	101198328	+	Intron	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLST	1743	broad.mit.edu	37	14	75360125	75360125	+	Missense_Mutation	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLX5	1749	broad.mit.edu	37	7	96650229	96650229	+	Missense_Mutation	SNP	G	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH10	196385	broad.mit.edu	37	12	124298029	124298029	+	Missense_Mutation	SNP	C	T	T	rs138397621	byFrequency	TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH11	8701	broad.mit.edu	37	7	21721152	21721152	+	Intron	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH5	1767	broad.mit.edu	37	5	13788778	13788778	+	Intron	SNP	T	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH6	1768	broad.mit.edu	37	2	84775457	84775457	+	Missense_Mutation	SNP	A	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH7	56171	broad.mit.edu	37	2	196825191	196825191	+	Missense_Mutation	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC3	5611	broad.mit.edu	37	13	96443247	96443247	+	Missense_Mutation	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC5B	85479	broad.mit.edu	37	8	66963858	66963858	+	Silent	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK10	55619	broad.mit.edu	37	2	225635387	225635387	+	Intron	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK11	139818	broad.mit.edu	37	X	117758564	117758564	+	Missense_Mutation	SNP	A	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK11	139818	broad.mit.edu	37	X	117814713	117814713	+	Intron	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK2	1794	broad.mit.edu	37	5	169186763	169186763	+	Missense_Mutation	SNP	G	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK2	1794	broad.mit.edu	37	5	169446013	169446013	+	Silent	SNP	G	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK4	9732	broad.mit.edu	37	7	111535708	111535708	+	Missense_Mutation	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPYSL2	1808	broad.mit.edu	37	8	26513217	26513217	+	Missense_Mutation	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DRGX	644168	broad.mit.edu	37	10	50599213	50599213	+	Missense_Mutation	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DST	667	broad.mit.edu	37	6	56472096	56472096	+	Intron	SNP	A	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DTNA	1837	broad.mit.edu	37	18	32374320	32374320	+	Intron	SNP	T	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYSF	8291	broad.mit.edu	37	2	71839888	71839888	+	Silent	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGLN3	112399	broad.mit.edu	37	14	34398476	34398476	+	Intron	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELTD1	64123	broad.mit.edu	37	1	79392809	79392809	+	Intron	SNP	C	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENG	2022	broad.mit.edu	37	9	130586661	130586661	+	Silent	SNP	C	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EP400	57634	broad.mit.edu	37	12	132498101	132498101	+	Silent	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EP400	57634	broad.mit.edu	37	12	132539519	132539519	+	Missense_Mutation	SNP	G	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA7	2045	broad.mit.edu	37	6	93955244	93955244	+	Intron	SNP	A	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERI3	79033	broad.mit.edu	37	1	44818453	44818453	+	Intron	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERN2	10595	broad.mit.edu	37	16	23713880	23713880	+	Intron	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESRRB	2103	broad.mit.edu	37	14	76965259	76965259	+	Intron	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EYA2	2139	broad.mit.edu	37	20	45702913	45702913	+	Silent	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FABP12	646486	broad.mit.edu	37	8	82437306	82437306	+	Nonsense_Mutation	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM102B	284611	broad.mit.edu	37	1	109148824	109148824	+	Intron	SNP	A	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM135B	51059	broad.mit.edu	37	8	139180172	139180172	+	Missense_Mutation	SNP	G	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM135B	51059	broad.mit.edu	37	8	139209829	139209829	+	Silent	SNP	A	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM13C	220965	broad.mit.edu	37	10	61083990	61083990	+	Intron	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM153C	653316	broad.mit.edu	37	5	177466249	177466249	+	Intron	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM190B	54462	broad.mit.edu	37	10	86259667	86259667	+	Missense_Mutation	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM193A	8603	broad.mit.edu	37	4	2691508	2691508	+	Intron	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM20B	9917	broad.mit.edu	37	1	179013192	179013192	+	Nonsense_Mutation	SNP	G	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM47A	158724	broad.mit.edu	37	X	34149722	34149722	+	Missense_Mutation	SNP	G	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM47C	442444	broad.mit.edu	37	X	37028384	37028384	+	Missense_Mutation	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM5C	339479	broad.mit.edu	37	1	190423887	190423887	+	Missense_Mutation	SNP	T	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM71B	153745	broad.mit.edu	37	5	156592624	156592624	+	Missense_Mutation	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM91A1	157769	broad.mit.edu	37	8	124789603	124789603	+	Intron	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FASTKD1	79675	broad.mit.edu	37	2	170387292	170387292	+	Intron	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO11	80204	broad.mit.edu	37	2	48066010	48066010	+	Missense_Mutation	SNP	T	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRL6	343413	broad.mit.edu	37	1	159783300	159783300	+	Missense_Mutation	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRLA	84824	broad.mit.edu	37	1	161680999	161680999	+	Missense_Mutation	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FER1L6	654463	broad.mit.edu	37	8	125052164	125052164	+	Silent	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGFR4	2264	broad.mit.edu	37	5	176520557	176520557	+	Intron	SNP	G	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FHOD3	80206	broad.mit.edu	37	18	34310681	34310681	+	Missense_Mutation	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FHOD3	80206	broad.mit.edu	37	18	34335226	34335226	+	Silent	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152286898	152286898	+	Missense_Mutation	SNP	C	A	A	rs113297198		TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ46321	389763	broad.mit.edu	37	9	84606402	84606402	+	Silent	SNP	T	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRAS1	80144	broad.mit.edu	37	4	79373507	79373507	+	Silent	SNP	A	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FUBP1	8880	broad.mit.edu	37	1	78425923	78425923	+	Nonsense_Mutation	SNP	G	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
G6PC	2538	broad.mit.edu	37	17	41056063	41056063	+	Intron	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABBR2	9568	broad.mit.edu	37	9	101304342	101304342	+	Intron	SNP	A	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAD2	2572	broad.mit.edu	37	10	26575229	26575229	+	Intron	SNP	T	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT14	79623	broad.mit.edu	37	2	31178519	31178519	+	Frame_Shift_Del	DEL	C	-	-			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT8	26290	broad.mit.edu	37	12	4873146	4873146	+	Missense_Mutation	SNP	G	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCA	25801	broad.mit.edu	37	2	163212867	163212867	+	Intron	SNP	A	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GGCT	79017	broad.mit.edu	37	7	30544351	30544351	+	5'UTR	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GIMAP5	55340	broad.mit.edu	37	7	150439764	150439764	+	Missense_Mutation	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GIMAP6	474344	broad.mit.edu	37	7	150325428	150325428	+	Missense_Mutation	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GINS2	51659	broad.mit.edu	37	16	85712182	85712182	+	Silent	SNP	A	G	G	rs138755140		TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLMN	11146	broad.mit.edu	37	1	92755673	92755673	+	Intron	SNP	G	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLT25D1	79709	broad.mit.edu	37	19	17690182	17690182	+	Intron	SNP	G	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GMFG	9535	broad.mit.edu	37	19	39825873	39825873	+	Intron	DEL	C	-	-			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GML	2765	broad.mit.edu	37	8	143921845	143921845	+	5'UTR	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GON4L	54856	broad.mit.edu	37	1	155815398	155815398	+	Intron	SNP	G	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GP2	2813	broad.mit.edu	37	16	20329664	20329664	+	Missense_Mutation	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPC3	2719	broad.mit.edu	37	X	132670042	132670042	+	3'UTR	SNP	T	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPIHBP1	338328	broad.mit.edu	37	8	144297010	144297010	+	Intron	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR123	84435	broad.mit.edu	37	10	134896241	134896241	+	Intron	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR139	124274	broad.mit.edu	37	16	20043936	20043937	+	Nonsense_Mutation	DNP	GG	TT	TT			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR77	27202	broad.mit.edu	37	19	47845055	47845055	+	Silent	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIA4	2893	broad.mit.edu	37	11	105795003	105795003	+	Intron	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIN2B	2904	broad.mit.edu	37	12	13768141	13768141	+	Missense_Mutation	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRINA	2907	broad.mit.edu	37	8	145065687	145065687	+	Missense_Mutation	SNP	A	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM1	2911	broad.mit.edu	37	6	146480615	146480615	+	Silent	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSG1L	146395	broad.mit.edu	37	16	27802648	27802648	+	3'UTR	SNP	G	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSPT2	23708	broad.mit.edu	37	X	51486791	51486791	+	Silent	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GYPA	2993	broad.mit.edu	37	4	145037952	145037952	+	Intron	SNP	C	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
H19	283120	broad.mit.edu	37	11	2016848	2016848	+	3'UTR	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HACE1	57531	broad.mit.edu	37	6	105192119	105192120	+	Intron	INS	-	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HBG2	3048	broad.mit.edu	37	11	5592781	5592781	+	Intron	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR5B	54497	broad.mit.edu	37	2	37227729	37227729	+	Nonsense_Mutation	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HHIPL1	84439	broad.mit.edu	37	14	100123176	100123176	+	Intron	DEL	G	-	-			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HLA-B	3106	broad.mit.edu	37	6	31248723	31248723	+	Intron	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNRNPUL2	221092	broad.mit.edu	37	11	62488849	62488849	+	Missense_Mutation	SNP	A	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXA13	3209	broad.mit.edu	37	7	27237756	27237756	+	3'UTR	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXD10	3236	broad.mit.edu	37	2	176981647	176981647	+	Missense_Mutation	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HPGD	3248	broad.mit.edu	37	4	175443105	175443105	+	Silent	SNP	T	C	C	rs146392763		TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPB3	8988	broad.mit.edu	37	5	53751553	53751553	+	5'UTR	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFT88	8100	broad.mit.edu	37	13	21166510	21166510	+	Missense_Mutation	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGF2R	3482	broad.mit.edu	37	6	160493977	160493977	+	Intron	SNP	T	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGFN1	91156	broad.mit.edu	37	1	201187763	201187763	+	Missense_Mutation	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1F6	27179	broad.mit.edu	37	2	113764288	113764288	+	Missense_Mutation	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1F7	27178	broad.mit.edu	37	2	113674893	113674893	+	Intron	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL7R	3575	broad.mit.edu	37	5	35874576	35874576	+	Silent	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IMPAD1	54928	broad.mit.edu	37	8	57876276	57876276	+	3'UTR	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INTU	27152	broad.mit.edu	37	4	128584607	128584607	+	Silent	SNP	G	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPO9	55705	broad.mit.edu	37	1	201823891	201823892	+	Intron	INS	-	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQCF2	389123	broad.mit.edu	37	3	51897392	51897392	+	3'UTR	DEL	G	-	-			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAX	3687	broad.mit.edu	37	16	31382401	31382401	+	Intron	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JHDM1D	80853	broad.mit.edu	37	7	139794028	139794028	+	Intron	SNP	G	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KANK4	163782	broad.mit.edu	37	1	62740490	62740490	+	Missense_Mutation	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNA2	3737	broad.mit.edu	37	1	111145816	111145816	+	3'UTR	SNP	A	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH4	23415	broad.mit.edu	37	17	40317401	40317401	+	Intron	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNT2	343450	broad.mit.edu	37	1	196227445	196227445	+	Silent	SNP	A	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0430	9665	broad.mit.edu	37	16	15694590	15694590	+	Intron	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0467	23334	broad.mit.edu	37	1	43900849	43900849	+	Intron	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0556	23247	broad.mit.edu	37	16	27689013	27689013	+	Intron	SNP	A	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0947	23379	broad.mit.edu	37	5	5486895	5486895	+	Silent	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1409	57578	broad.mit.edu	37	14	94060029	94060029	+	Silent	SNP	G	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1409	57578	broad.mit.edu	37	14	94158119	94158119	+	Missense_Mutation	SNP	C	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1429	25962	broad.mit.edu	37	8	95531312	95531312	+	Missense_Mutation	SNP	T	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1432	57589	broad.mit.edu	37	9	5772720	5772720	+	Missense_Mutation	SNP	A	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1755	85449	broad.mit.edu	37	20	36869019	36869019	+	Missense_Mutation	SNP	G	T	T	rs144867582		TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1797	54914	broad.mit.edu	37	9	20981356	20981356	+	Intron	SNP	G	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIDINS220	57498	broad.mit.edu	37	2	8888001	8888001	+	Intron	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF12	113220	broad.mit.edu	37	9	116858525	116858525	+	Intron	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF15	56992	broad.mit.edu	37	3	44846493	44846493	+	Intron	SNP	G	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF17	57576	broad.mit.edu	37	1	20992836	20992836	+	Intron	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF21B	23046	broad.mit.edu	37	1	200960801	200960801	+	Missense_Mutation	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF21B	23046	broad.mit.edu	37	1	200961370	200961370	+	Intron	SNP	G	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF21B	23046	broad.mit.edu	37	1	200969654	200969654	+	Missense_Mutation	SNP	G	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF2B	84643	broad.mit.edu	37	17	51901824	51901824	+	Missense_Mutation	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL20	27252	broad.mit.edu	37	1	173703228	173703228	+	Missense_Mutation	SNP	G	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT13	3860	broad.mit.edu	37	17	39658830	39658830	+	Missense_Mutation	SNP	T	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT14	3861	broad.mit.edu	37	17	39739908	39739908	+	Silent	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT34	3885	broad.mit.edu	37	17	39537532	39537532	+	Intron	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP11-1	337880	broad.mit.edu	37	21	32253584	32253584	+	Missense_Mutation	SNP	C	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP5-5	439915	broad.mit.edu	37	11	1651183	1651183	+	Missense_Mutation	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCE1A	353131	broad.mit.edu	37	1	152799832	152799832	+	5'Flank	SNP	A	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCE1F	353137	broad.mit.edu	37	1	152748857	152748857	+	Missense_Mutation	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGALS9	3965	broad.mit.edu	37	17	25974363	25974363	+	Missense_Mutation	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LHFPL1	340596	broad.mit.edu	37	X	111903845	111903845	+	Intron	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRA6	79168	broad.mit.edu	37	19	54745485	54745485	+	Missense_Mutation	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRB1	10859	broad.mit.edu	37	19	55143393	55143393	+	Nonsense_Mutation	SNP	C	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIN7C	55327	broad.mit.edu	37	11	27522982	27522982	+	Intron	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIPH	200879	broad.mit.edu	37	3	185232351	185232351	+	Intron	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMAN2L	81562	broad.mit.edu	37	2	97400113	97400113	+	Intron	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC338651	338651	broad.mit.edu	37	11	1618918	1618918	+	Missense_Mutation	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC440040	440040	broad.mit.edu	37	11	49598269	49598269	+	Missense_Mutation	SNP	G	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC645166	645166	broad.mit.edu	37	1	148932735	148932735	+	Intron	SNP	A	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC96610	96610	broad.mit.edu	37	22	23213997	23213997	+	RNA	SNP	A	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRCH2	57631	broad.mit.edu	37	X	114357172	114357172	+	Intron	SNP	A	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRFN5	145581	broad.mit.edu	37	14	42356586	42356586	+	Missense_Mutation	SNP	G	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	140995720	140995720	+	Splice_Site	SNP	C	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141641581	141641581	+	Missense_Mutation	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1	4035	broad.mit.edu	37	12	57595378	57595378	+	Missense_Mutation	SNP	G	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP2	4036	broad.mit.edu	37	2	170099499	170099499	+	Missense_Mutation	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP2	4036	broad.mit.edu	37	2	170113562	170113562	+	Intron	SNP	C	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP2	4036	broad.mit.edu	37	2	170127535	170127535	+	Missense_Mutation	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC18	474354	broad.mit.edu	37	10	50121502	50121502	+	Silent	SNP	T	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC8A	56262	broad.mit.edu	37	9	131670205	131670205	+	Silent	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC8E	80131	broad.mit.edu	37	19	7965609	7965609	+	Silent	SNP	G	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRCC1	85444	broad.mit.edu	37	8	86027601	86027601	+	Intron	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRIQ3	127255	broad.mit.edu	37	1	74507380	74507380	+	Missense_Mutation	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEC1	9947	broad.mit.edu	37	X	140995890	140995890	+	Missense_Mutation	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MALAT1	378938	broad.mit.edu	37	11	65273655	65273655	+	RNA	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED1	5469	broad.mit.edu	37	17	37580133	37580133	+	Intron	SNP	C	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED23	9439	broad.mit.edu	37	6	131943063	131943063	+	Silent	SNP	T	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEIS2	4212	broad.mit.edu	37	15	37187407	37187407	+	Missense_Mutation	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEPE	56955	broad.mit.edu	37	4	88766342	88766342	+	Missense_Mutation	SNP	A	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MFSD6	54842	broad.mit.edu	37	2	191301129	191301129	+	Missense_Mutation	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAM	8972	broad.mit.edu	37	7	141785590	141785590	+	Intron	SNP	C	A	A	rs111685780		TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAM	8972	broad.mit.edu	37	7	141802532	141802532	+	Intron	SNP	G	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIB2	142678	broad.mit.edu	37	1	1562844	1562844	+	Intron	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MKRN3	7681	broad.mit.edu	37	15	23811300	23811300	+	Frame_Shift_Del	DEL	G	-	-			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLKL	197259	broad.mit.edu	37	16	74712987	74712988	+	Intron	DNP	CC	AA	AA	rs148805824	by1000genomes	TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMD2	221938	broad.mit.edu	37	7	4965100	4965100	+	Silent	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP16	4325	broad.mit.edu	37	8	89209452	89209452	+	Silent	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP21	118856	broad.mit.edu	37	10	127459199	127459199	+	Intron	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP27	64066	broad.mit.edu	37	11	102565698	102565698	+	Missense_Mutation	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MON2	23041	broad.mit.edu	37	12	62981934	62981934	+	Missense_Mutation	SNP	A	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOV10L1	54456	broad.mit.edu	37	22	50591726	50591726	+	Intron	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MS4A1	931	broad.mit.edu	37	11	60235910	60235910	+	Missense_Mutation	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MS4A2	2206	broad.mit.edu	37	11	59860249	59860249	+	Intron	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MS4A4A	51338	broad.mit.edu	37	11	60075571	60075571	+	Intron	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MST4	51765	broad.mit.edu	37	X	131206387	131206387	+	Missense_Mutation	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTA3	57504	broad.mit.edu	37	2	42883392	42883392	+	Silent	SNP	A	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9048033	9048033	+	Missense_Mutation	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9087382	9087382	+	Missense_Mutation	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC17	140453	broad.mit.edu	37	7	100683669	100683669	+	Missense_Mutation	SNP	G	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC7	4589	broad.mit.edu	37	4	71347269	71347269	+	Missense_Mutation	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH3	4621	broad.mit.edu	37	17	10555979	10555979	+	Intron	SNP	C	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYL4	4635	broad.mit.edu	37	17	45300361	45300361	+	Intron	SNP	A	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO16	23026	broad.mit.edu	37	13	109562326	109562326	+	Intron	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO3A	53904	broad.mit.edu	37	10	26462618	26462618	+	Missense_Mutation	SNP	A	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYRIP	25924	broad.mit.edu	37	3	40204346	40204346	+	Intron	SNP	T	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
N4BP2L2	10443	broad.mit.edu	37	13	33018246	33018246	+	Missense_Mutation	SNP	T	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NARS	4677	broad.mit.edu	37	18	55276717	55276717	+	Intron	SNP	T	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBAS	51594	broad.mit.edu	37	2	15427279	15427279	+	Missense_Mutation	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBEA	26960	broad.mit.edu	37	13	35619056	35619056	+	Intron	SNP	T	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCAPD3	23310	broad.mit.edu	37	11	134050952	134050952	+	Intron	SNP	T	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDE1	54820	broad.mit.edu	37	16	15785148	15785148	+	Missense_Mutation	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEBL	10529	broad.mit.edu	37	10	21317950	21317950	+	Intron	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEDD4	4734	broad.mit.edu	37	15	56139269	56139269	+	Intron	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEURL	9148	broad.mit.edu	37	10	105330655	105330655	+	Missense_Mutation	SNP	A	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEUROG1	4762	broad.mit.edu	37	5	134871381	134871381	+	5'UTR	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NF1	4763	broad.mit.edu	37	17	29562721	29562721	+	Frame_Shift_Del	DEL	G	-	-			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NF1	4763	broad.mit.edu	37	17	29679430	29679430	+	Frame_Shift_Del	DEL	T	-	-			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFKBID	84807	broad.mit.edu	37	19	36380905	36380905	+	Missense_Mutation	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFRKB	4798	broad.mit.edu	37	11	129751924	129751924	+	Intron	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NID2	22795	broad.mit.edu	37	14	52509064	52509064	+	Silent	SNP	T	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP8	126205	broad.mit.edu	37	19	56481879	56481879	+	Intron	SNP	A	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOD1	10392	broad.mit.edu	37	7	30492353	30492353	+	Missense_Mutation	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOS2	4843	broad.mit.edu	37	17	26114746	26114746	+	Missense_Mutation	SNP	T	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN1	9378	broad.mit.edu	37	2	50883582	50883582	+	Intron	SNP	G	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTN1	9423	broad.mit.edu	37	17	9124456	9124456	+	Intron	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF5	55998	broad.mit.edu	37	X	101093983	101093983	+	Intron	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXNL1	115861	broad.mit.edu	37	19	17571338	17571338	+	Intron	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OAF	220323	broad.mit.edu	37	11	120097542	120097542	+	Silent	SNP	G	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OC90	729330	broad.mit.edu	37	8	133053357	133053357	+	Missense_Mutation	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPA1	4976	broad.mit.edu	37	3	193333443	193333443	+	Intron	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10A7	121364	broad.mit.edu	37	12	55615682	55615682	+	Missense_Mutation	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10G2	26534	broad.mit.edu	37	14	22102829	22102829	+	Missense_Mutation	SNP	G	C	C	rs57476477	byFrequency;by1000genomes	TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10G9	219870	broad.mit.edu	37	11	123894188	123894188	+	Missense_Mutation	SNP	G	T	T	rs144713433		TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR13C8	138802	broad.mit.edu	37	9	107331444	107331444	+	5'Flank	SNP	G	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1A2	26189	broad.mit.edu	37	17	3101096	3101096	+	Missense_Mutation	SNP	G	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2A1	346528	broad.mit.edu	37	7	144015559	144015559	+	Silent	SNP	G	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2M7	391196	broad.mit.edu	37	1	248487249	248487249	+	Missense_Mutation	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2M7	391196	broad.mit.edu	37	1	248487840	248487840	+	Missense_Mutation	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T12	127064	broad.mit.edu	37	1	248458341	248458341	+	Silent	SNP	G	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T12	127064	broad.mit.edu	37	1	248458344	248458344	+	Silent	SNP	G	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR3A3	8392	broad.mit.edu	37	17	3324736	3324737	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4A16	81327	broad.mit.edu	37	11	55111517	55111517	+	Missense_Mutation	SNP	A	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4D6	219983	broad.mit.edu	37	11	59225048	59225048	+	Silent	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4N5	390437	broad.mit.edu	37	14	20612416	20612416	+	Silent	SNP	C	A	A	rs76001619	byFrequency;by1000genomes	TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5D13	390142	broad.mit.edu	37	11	55540864	55540864	+	5'Flank	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5M8	219484	broad.mit.edu	37	11	56258326	56258326	+	Missense_Mutation	SNP	T	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6C70	390327	broad.mit.edu	37	12	55863608	55863608	+	Missense_Mutation	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8H1	219469	broad.mit.edu	37	11	56057612	56057612	+	Missense_Mutation	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL5	114879	broad.mit.edu	37	11	3121425	3121425	+	Silent	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL6	114880	broad.mit.edu	37	2	179209008	179209008	+	Intron	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL6	114880	broad.mit.edu	37	2	179238620	179238620	+	Missense_Mutation	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTOA	146183	broad.mit.edu	37	16	21696548	21696548	+	Intron	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTOF	9381	broad.mit.edu	37	2	26683600	26683600	+	Nonsense_Mutation	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PADI4	23569	broad.mit.edu	37	1	17666217	17666217	+	Silent	SNP	G	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPPA2	60676	broad.mit.edu	37	1	176762718	176762718	+	Silent	SNP	T	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPPA2	60676	broad.mit.edu	37	1	176762847	176762847	+	Intron	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARD3B	117583	broad.mit.edu	37	2	205978327	205978327	+	Intron	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARD3B	117583	broad.mit.edu	37	2	206364739	206364739	+	Missense_Mutation	SNP	A	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARG	8505	broad.mit.edu	37	10	51480445	51480445	+	Intron	SNP	C	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARN	5073	broad.mit.edu	37	16	14711498	14711498	+	Missense_Mutation	SNP	T	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH11X	27328	broad.mit.edu	37	X	91238182	91238182	+	Intron	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH11X	27328	broad.mit.edu	37	X	91714861	91714861	+	Intron	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH17	27253	broad.mit.edu	37	13	58240807	58240807	+	Missense_Mutation	SNP	T	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH7	5099	broad.mit.edu	37	4	30725632	30725632	+	Missense_Mutation	SNP	A	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA12	56137	broad.mit.edu	37	5	140256413	140256413	+	Silent	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA7	56141	broad.mit.edu	37	5	140215949	140215949	+	Missense_Mutation	SNP	G	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB13	56123	broad.mit.edu	37	5	140594897	140594897	+	Missense_Mutation	SNP	A	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB17	54661	broad.mit.edu	37	5	140537221	140537221	+	Missense_Mutation	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB1	29930	broad.mit.edu	37	5	140431512	140431512	+	Missense_Mutation	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB3	56132	broad.mit.edu	37	5	140482154	140482154	+	Missense_Mutation	SNP	G	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDCD6IP	10015	broad.mit.edu	37	3	33877528	33877528	+	Intron	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE1A	5136	broad.mit.edu	37	2	183291392	183291392	+	Intron	SNP	A	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4B	5142	broad.mit.edu	37	1	66723462	66723462	+	Intron	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144882871	144882871	+	Missense_Mutation	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144915608	144915608	+	Missense_Mutation	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZD2	23037	broad.mit.edu	37	5	31847444	31847444	+	Intron	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEG3	5178	broad.mit.edu	37	19	57327625	57327625	+	Missense_Mutation	SNP	T	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEX5L	51555	broad.mit.edu	37	3	179537810	179537810	+	Intron	SNP	A	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHACTR3	116154	broad.mit.edu	37	20	58318045	58318045	+	Intron	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIP5K1B	8395	broad.mit.edu	37	9	71509280	71509280	+	Missense_Mutation	SNP	T	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PJA2	9867	broad.mit.edu	37	5	108717348	108717348	+	Missense_Mutation	SNP	T	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKDCC	91461	broad.mit.edu	37	2	42284449	42284449	+	Silent	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1	5314	broad.mit.edu	37	6	51887575	51887575	+	Intron	SNP	T	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKLR	5313	broad.mit.edu	37	1	155261655	155261655	+	Frame_Shift_Del	DEL	G	-	-			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKP1	5317	broad.mit.edu	37	1	201288901	201288901	+	Intron	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCE1	51196	broad.mit.edu	37	10	95892185	95892185	+	Missense_Mutation	SNP	T	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCH1	23007	broad.mit.edu	37	3	155199813	155199813	+	Missense_Mutation	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCH2	9651	broad.mit.edu	37	1	2420731	2420731	+	Missense_Mutation	SNP	G	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHB2	55041	broad.mit.edu	37	2	131935309	131935309	+	Intron	SNP	G	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHB2	55041	broad.mit.edu	37	2	132109724	132109724	+	Intron	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA2	5362	broad.mit.edu	37	1	208270154	208270154	+	Silent	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNPT1	87178	broad.mit.edu	37	2	55894127	55894127	+	Missense_Mutation	SNP	T	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POC1B	282809	broad.mit.edu	37	12	89860637	89860637	+	Silent	SNP	G	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPARGC1A	10891	broad.mit.edu	37	4	23814445	23814445	+	Missense_Mutation	SNP	T	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPM1K	152926	broad.mit.edu	37	4	89189557	89189557	+	Intron	SNP	G	A	A	rs142621223	by1000genomes	TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R3A	5506	broad.mit.edu	37	7	113522066	113522066	+	Intron	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRAMEF2	65122	broad.mit.edu	37	1	12919770	12919770	+	Missense_Mutation	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM9	56979	broad.mit.edu	37	5	23526524	23526524	+	Missense_Mutation	SNP	G	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM9	56979	broad.mit.edu	37	5	23526569	23526569	+	Nonsense_Mutation	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM9	56979	broad.mit.edu	37	5	23526586	23526586	+	Silent	SNP	G	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM9	56979	broad.mit.edu	37	5	23526601	23526601	+	Nonsense_Mutation	SNP	G	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRG4	10216	broad.mit.edu	37	1	186269110	186269110	+	Intron	SNP	C	A	A	rs77422143	by1000genomes	TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRIM2	5558	broad.mit.edu	37	6	57398139	57398139	+	Missense_Mutation	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PROM2	150696	broad.mit.edu	37	2	95953996	95953996	+	Missense_Mutation	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG1	5669	broad.mit.edu	37	19	43348899	43348899	+	Intron	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSIP1	11168	broad.mit.edu	37	9	15506708	15506708	+	Intron	SNP	G	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTGER2	5732	broad.mit.edu	37	14	52781374	52781374	+	Silent	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN9	5780	broad.mit.edu	37	15	75816577	75816577	+	Missense_Mutation	SNP	C	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	8449818	8449818	+	Missense_Mutation	SNP	A	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRZ1	5803	broad.mit.edu	37	7	121651908	121651909	+	Frame_Shift_Ins	INS	-	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB3GAP2	25782	broad.mit.edu	37	1	220379362	220379362	+	Intron	DEL	A	-	-			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RABEP1	9135	broad.mit.edu	37	17	5276845	5276845	+	Intron	SNP	C	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RACGAP1P	83956	broad.mit.edu	37	12	45457374	45457375	+	RNA	INS	-	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RALA	5898	broad.mit.edu	37	7	39736360	39736360	+	Missense_Mutation	SNP	A	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAPGEF1	2889	broad.mit.edu	37	9	134454756	134454756	+	3'UTR	SNP	G	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM24	221662	broad.mit.edu	37	6	17292081	17292081	+	Missense_Mutation	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REG3A	5068	broad.mit.edu	37	2	79384873	79384873	+	Intron	SNP	C	G	G	rs146788331	by1000genomes	TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RELN	5649	broad.mit.edu	37	7	103252320	103252320	+	Intron	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS18	64407	broad.mit.edu	37	1	192129574	192129574	+	Intron	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHBG	57127	broad.mit.edu	37	1	156354339	156354339	+	Missense_Mutation	SNP	T	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHOU	58480	broad.mit.edu	37	1	228879403	228879403	+	Missense_Mutation	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RICTOR	253260	broad.mit.edu	37	5	38949913	38949913	+	Missense_Mutation	SNP	G	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS2	9699	broad.mit.edu	37	8	104897787	104897787	+	Nonsense_Mutation	SNP	C	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIN3	79890	broad.mit.edu	37	14	93118691	93118691	+	Missense_Mutation	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RMND5A	64795	broad.mit.edu	37	2	87128071	87128071	+	Intron	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNASEN	29102	broad.mit.edu	37	5	31429689	31429689	+	Intron	SNP	C	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RND3	390	broad.mit.edu	37	2	151331328	151331328	+	Intron	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF123	63891	broad.mit.edu	37	3	49743572	49743572	+	Intron	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF133	168433	broad.mit.edu	37	7	122338345	122338345	+	Missense_Mutation	SNP	T	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROBO4	54538	broad.mit.edu	37	11	124761606	124761606	+	Missense_Mutation	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPGRIP1L	23322	broad.mit.edu	37	16	53639303	53639303	+	Intron	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPGR	6103	broad.mit.edu	37	X	38178331	38178331	+	Intron	SNP	G	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RRN3	54700	broad.mit.edu	37	16	15166736	15166736	+	Intron	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTN1	6252	broad.mit.edu	37	14	60069844	60069844	+	Intron	SNP	A	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUNX1T1	862	broad.mit.edu	37	8	92999139	92999139	+	Silent	SNP	T	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237789139	237789139	+	Intron	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237813179	237813179	+	Silent	SNP	A	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237921011	237921011	+	Missense_Mutation	SNP	A	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR3	6263	broad.mit.edu	37	15	33936678	33936678	+	Silent	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN2A	6326	broad.mit.edu	37	2	166164446	166164446	+	Missense_Mutation	SNP	G	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN3B	55800	broad.mit.edu	37	11	123524448	123524448	+	Intron	SNP	T	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDR42E1	93517	broad.mit.edu	37	16	82034527	82034527	+	Intron	SNP	A	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA3D	223117	broad.mit.edu	37	7	84694657	84694657	+	Intron	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA5A	9037	broad.mit.edu	37	5	9197541	9197541	+	Intron	SNP	A	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETDB2	83852	broad.mit.edu	37	13	50042023	50042023	+	Missense_Mutation	SNP	G	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEZ6L	23544	broad.mit.edu	37	22	26747161	26747161	+	Missense_Mutation	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SF4	57794	broad.mit.edu	37	19	19388526	19388526	+	Intron	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFPQ	6421	broad.mit.edu	37	1	35652958	35652958	+	Intron	SNP	A	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH2D4B	387694	broad.mit.edu	37	10	82369203	82369203	+	Missense_Mutation	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3BP2	6452	broad.mit.edu	37	4	2831140	2831140	+	Intron	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3TC2	79628	broad.mit.edu	37	5	148388674	148388674	+	Intron	SNP	A	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHBG	6462	broad.mit.edu	37	17	7534882	7534882	+	Intron	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC16	400709	broad.mit.edu	37	19	50475331	50475331	+	Intron	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC6	946	broad.mit.edu	37	19	52033116	52033116	+	Missense_Mutation	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIRPB1	10326	broad.mit.edu	37	20	1551451	1551451	+	Nonsense_Mutation	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SI	6476	broad.mit.edu	37	3	164766917	164766917	+	Missense_Mutation	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLAIN2	57606	broad.mit.edu	37	4	48381723	48381723	+	Silent	SNP	A	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A2	6558	broad.mit.edu	37	5	127514405	127514405	+	Intron	SNP	A	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A3	6559	broad.mit.edu	37	16	56913484	56913484	+	Silent	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC13A2	9058	broad.mit.edu	37	17	26818601	26818601	+	Missense_Mutation	SNP	G	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC23A1	9963	broad.mit.edu	37	5	138718265	138718265	+	Silent	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A11	284129	broad.mit.edu	37	17	78210991	78210991	+	Intron	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC2A14	144195	broad.mit.edu	37	12	7967074	7967074	+	Missense_Mutation	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC2A2	6514	broad.mit.edu	37	3	170736221	170736221	+	Intron	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC2A8	29988	broad.mit.edu	37	9	130160593	130160593	+	Intron	SNP	A	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC35F1	222553	broad.mit.edu	37	6	118598573	118598573	+	Intron	SNP	G	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A10	57282	broad.mit.edu	37	2	162719630	162719630	+	Intron	SNP	C	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A5	6528	broad.mit.edu	37	19	17988751	17988751	+	Intron	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A2	6530	broad.mit.edu	37	16	55729298	55729298	+	Silent	SNP	G	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC7A14	57709	broad.mit.edu	37	3	170214357	170214357	+	Intron	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC7A14	57709	broad.mit.edu	37	3	170214499	170214499	+	Intron	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO1B1	10599	broad.mit.edu	37	12	21353667	21353667	+	Intron	SNP	A	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO1B3	28234	broad.mit.edu	37	12	21033901	21033901	+	Silent	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT2	9353	broad.mit.edu	37	4	20555632	20555632	+	Intron	SNP	A	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT2	9353	broad.mit.edu	37	4	20597397	20597397	+	Missense_Mutation	SNP	A	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLITRK1	114798	broad.mit.edu	37	13	84454106	84454106	+	Missense_Mutation	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMAD3	4088	broad.mit.edu	37	15	67473723	67473723	+	Missense_Mutation	SNP	G	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMPD4	55627	broad.mit.edu	37	2	130910820	130910820	+	Intron	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMS	6611	broad.mit.edu	37	X	22010739	22010739	+	Missense_Mutation	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNRNP200	23020	broad.mit.edu	37	2	96950908	96950908	+	Intron	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX15	29907	broad.mit.edu	37	11	64795119	64795119	+	Intron	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX18	112574	broad.mit.edu	37	5	53814525	53814525	+	Missense_Mutation	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX25	83891	broad.mit.edu	37	4	186274560	186274564	+	Intron	DEL	TACAC	-	-			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS1	114815	broad.mit.edu	37	10	108438960	108438960	+	Intron	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPANXC	64663	broad.mit.edu	37	X	140358296	140358296	+	Intron	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRGAP3	9901	broad.mit.edu	37	3	9032338	9032338	+	Missense_Mutation	SNP	G	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRPX	8406	broad.mit.edu	37	X	38033568	38033568	+	Missense_Mutation	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSFA2	6744	broad.mit.edu	37	2	182780208	182780208	+	Missense_Mutation	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST14	6768	broad.mit.edu	37	11	130064043	130064043	+	Splice_Site	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST18	9705	broad.mit.edu	37	8	53049131	53049131	+	Intron	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK32B	55351	broad.mit.edu	37	4	5399976	5399976	+	Intron	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STRA8	346673	broad.mit.edu	37	7	134927625	134927625	+	Intron	SNP	T	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUPT5H	6829	broad.mit.edu	37	19	39959770	39959770	+	Nonsense_Mutation	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUSD4	55061	broad.mit.edu	37	1	223465926	223465926	+	Silent	SNP	T	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYTL5	94122	broad.mit.edu	37	X	37984682	37984682	+	Missense_Mutation	SNP	T	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF1L	138474	broad.mit.edu	37	9	32635336	32635336	+	Missense_Mutation	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TATDN3	128387	broad.mit.edu	37	1	212976051	212976051	+	Missense_Mutation	SNP	T	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D16	125058	broad.mit.edu	37	17	77987181	77987181	+	Missense_Mutation	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D3P2	440452	broad.mit.edu	37	17	60351180	60351180	+	Missense_Mutation	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX20	57057	broad.mit.edu	37	7	35242211	35242211	+	Missense_Mutation	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX22	50945	broad.mit.edu	37	X	79286020	79286020	+	Missense_Mutation	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDG	6996	broad.mit.edu	37	12	104378552	104378552	+	Missense_Mutation	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDRD6	221400	broad.mit.edu	37	6	46660740	46660740	+	Silent	SNP	G	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDRD9	122402	broad.mit.edu	37	14	104490907	104490907	+	Missense_Mutation	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEAD1	7003	broad.mit.edu	37	11	12886397	12886397	+	Missense_Mutation	SNP	A	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEX15	56154	broad.mit.edu	37	8	30694594	30694594	+	Missense_Mutation	SNP	A	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGFBRAP1	9392	broad.mit.edu	37	2	105912807	105912807	+	Intron	SNP	A	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGM6	343641	broad.mit.edu	37	20	2384036	2384036	+	Intron	SNP	G	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THSD7A	221981	broad.mit.edu	37	7	11447019	11447019	+	Missense_Mutation	SNP	G	T	T	rs142233480	by1000genomes	TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THSD7B	80731	broad.mit.edu	37	2	138163308	138163308	+	Missense_Mutation	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIAM1	7074	broad.mit.edu	37	21	32537365	32537365	+	Nonsense_Mutation	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLE4	7091	broad.mit.edu	37	9	82337955	82337955	+	Intron	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLL1	7092	broad.mit.edu	37	4	167022109	167022109	+	3'UTR	SNP	A	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLL1	7092	broad.mit.edu	37	4	167022111	167022111	+	3'UTR	SNP	A	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TM7SF4	81501	broad.mit.edu	37	8	105361895	105361895	+	Intron	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMCO7	79613	broad.mit.edu	37	16	68953169	68953169	+	Intron	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM132B	114795	broad.mit.edu	37	12	126138770	126138770	+	Missense_Mutation	SNP	C	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM217	221468	broad.mit.edu	37	6	37186304	37186304	+	Missense_Mutation	SNP	C	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMIGD1	388364	broad.mit.edu	37	17	28656339	28656339	+	Silent	SNP	G	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS11F	389208	broad.mit.edu	37	4	68934421	68934421	+	Missense_Mutation	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNFRSF11B	4982	broad.mit.edu	37	8	119936780	119936780	+	Missense_Mutation	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNNI3K	51086	broad.mit.edu	37	1	74905377	74905377	+	Intron	SNP	T	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNR	7143	broad.mit.edu	37	1	175355420	175355420	+	Missense_Mutation	SNP	G	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNR	7143	broad.mit.edu	37	1	175360617	175360617	+	Intron	SNP	T	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNR	7143	broad.mit.edu	37	1	175365934	175365934	+	Missense_Mutation	SNP	G	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOP1MT	116447	broad.mit.edu	37	8	144407573	144407573	+	Missense_Mutation	SNP	T	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP53	7157	broad.mit.edu	37	17	7577609	7577609	+	Splice_Site	SNP	C	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRA2A	29896	broad.mit.edu	37	7	23556189	23556189	+	Intron	SNP	T	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM39	56658	broad.mit.edu	37	6	30309955	30309955	+	Missense_Mutation	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIO	7204	broad.mit.edu	37	5	14364019	14364019	+	Missense_Mutation	SNP	A	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPA1	8989	broad.mit.edu	37	8	72973915	72973915	+	Missense_Mutation	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPC7	57113	broad.mit.edu	37	5	135692916	135692916	+	Missense_Mutation	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM6	140803	broad.mit.edu	37	9	77436681	77436681	+	Missense_Mutation	SNP	T	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM6	140803	broad.mit.edu	37	9	77457061	77457061	+	Intron	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSKS	60385	broad.mit.edu	37	19	50245161	50245161	+	Missense_Mutation	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC13	79573	broad.mit.edu	37	1	231081094	231081094	+	Intron	SNP	T	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC8	123016	broad.mit.edu	37	14	89327606	89327606	+	Missense_Mutation	SNP	T	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTLL8	164714	broad.mit.edu	37	22	50485615	50485615	+	Silent	SNP	T	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179449532	179449532	+	Silent	SNP	A	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179582535	179582535	+	Missense_Mutation	SNP	G	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TXLNB	167838	broad.mit.edu	37	6	139598001	139598001	+	Missense_Mutation	SNP	T	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE2O	63893	broad.mit.edu	37	17	74398656	74398656	+	Intron	SNP	G	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBN2	254048	broad.mit.edu	37	7	138967913	138967913	+	Missense_Mutation	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR1	197131	broad.mit.edu	37	15	43367404	43367404	+	Intron	SNP	T	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR5	51366	broad.mit.edu	37	8	103289440	103289440	+	Intron	SNP	A	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B28	54490	broad.mit.edu	37	4	70160247	70160247	+	Splice_Site	SNP	G	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC13C	440279	broad.mit.edu	37	15	54914534	54914534	+	Missense_Mutation	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC45B	146862	broad.mit.edu	37	17	33510508	33510508	+	Silent	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC5A	90249	broad.mit.edu	37	5	176301187	176301187	+	Intron	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC80	285175	broad.mit.edu	37	2	210658353	210658353	+	Intron	SNP	G	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UPP1	7378	broad.mit.edu	37	7	48146550	48146550	+	Missense_Mutation	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UQCRC1	7384	broad.mit.edu	37	3	48646610	48646610	+	Silent	SNP	A	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP53	54532	broad.mit.edu	37	4	120170028	120170029	+	Nonsense_Mutation	DNP	GG	CT	CT	rs144065914	by1000genomes	TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTP14C	9724	broad.mit.edu	37	13	52602691	52602691	+	5'UTR	SNP	A	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	42681352	42681352	+	IGR	SNP	C	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	101640556	101640556	+	IGR	SNP	A	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	50129700	50129700	+	IGR	SNP	C	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	98436358	98436358	+	IGR	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	19271489	19271489	+	IGR	SNP	A	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	19400758	19400758	+	IGR	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	57889159	57889159	+	IGR	SNP	C	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	19468505	19468505	+	IGR	SNP	T	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	19475772	19475772	+	IGR	SNP	G	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	63589798	63589798	+	IGR	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	90204003	90204003	+	IGR	SNP	G	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	20434159	20434159	+	IGR	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	20481958	20481958	+	IGR	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	22566766	22566766	+	IGR	SNP	T	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	27890416	27890416	+	IGR	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	35591459	35591459	+	IGR	SNP	C	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	53178427	53178427	+	IGR	SNP	G	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33424677	33424677	+	IGR	SNP	G	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33605665	33605665	+	IGR	SNP	G	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	34335996	34335996	+	IGR	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	46660301	46660301	+	IGR	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	28898291	28898291	+	IGR	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	13151821	13151821	+	IGR	SNP	G	T	T	rs111499958	by1000genomes	TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	14146760	14146760	+	IGR	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	14361689	14361689	+	IGR	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	156997	156997	+	IGR	SNP	A	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	104615709	104615709	+	IGR	SNP	G	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	194158416	194158416	+	IGR	SNP	C	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	210439404	210439404	+	IGR	SNP	G	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	248604932	248604932	+	IGR	SNP	G	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	47310127	47310127	+	IGR	SNP	A	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	79216154	79216154	+	IGR	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	79986950	79986951	+	IGR	DNP	GG	TT	TT			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	91489953	91489953	+	IGR	SNP	G	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	97145186	97145186	+	IGR	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	14900719	14900719	+	IGR	SNP	C	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	16130636	16130636	+	IGR	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	24475318	24475318	+	IGR	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	16352332	16352332	+	IGR	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	39345009	39345009	+	IGR	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	192746707	192746707	+	IGR	SNP	G	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	81425504	81425504	+	IGR	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	85542586	85542586	+	IGR	SNP	C	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	183867537	183867537	+	IGR	SNP	A	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	39255878	39255878	+	IGR	SNP	T	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	75419583	75419583	+	IGR	SNP	T	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	96068324	96068324	+	IGR	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	104493970	104493970	+	IGR	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	112998943	112998943	+	IGR	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	4176054	4176054	+	IGR	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	57461681	57461681	+	IGR	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	65296816	65296816	+	IGR	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	70113827	70113827	+	IGR	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	107910761	107910761	+	IGR	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	117114586	117114587	+	IGR	DNP	GG	TT	TT			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	97728693	97728693	+	IGR	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	29149364	29149364	+	IGR	SNP	G	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	12511779	12511779	+	IGR	SNP	G	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	128736534	128736534	+	IGR	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	145281309	145281309	+	IGR	DEL	A	-	-			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	148277780	148277780	+	IGR	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	55832452	55832452	+	IGR	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	56358450	56358450	+	IGR	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	61969439	61969439	+	IGR	SNP	G	A	A	rs28848307		TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63563185	63563185	+	IGR	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63601890	63601890	+	IGR	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	75747162	75747162	+	IGR	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	120493066	120493066	+	IGR	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	50653020	50653020	+	IGR	SNP	T	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	50653842	50653842	+	IGR	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	73142625	73142625	+	IGR	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	80483727	80483727	+	IGR	SNP	A	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	90351075	90351075	+	IGR	SNP	A	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	42337299	42337299	+	IGR	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	44109247	44109247	+	IGR	SNP	A	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	7477791	7477791	+	IGR	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	120338478	120338478	+	IGR	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	144711805	144711805	+	IGR	SNP	C	A	A	rs80119726		TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	48136473	48136473	+	IGR	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	92543777	92543777	+	IGR	SNP	G	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAV3	10451	broad.mit.edu	37	1	108247311	108247311	+	Intron	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAX1	11023	broad.mit.edu	37	10	118896116	118896116	+	Missense_Mutation	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VCL	7414	broad.mit.edu	37	10	75874084	75874084	+	Missense_Mutation	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VNN2	8875	broad.mit.edu	37	6	133073886	133073886	+	Nonsense_Mutation	SNP	G	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13A	23230	broad.mit.edu	37	9	79890421	79890422	+	Nonsense_Mutation	DNP	GG	CT	CT			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13A	23230	broad.mit.edu	37	9	79908412	79908412	+	Silent	SNP	A	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS41	27072	broad.mit.edu	37	7	38937702	38937702	+	Missense_Mutation	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS41	27072	broad.mit.edu	37	7	38937757	38937757	+	Intron	SNP	C	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS45	11311	broad.mit.edu	37	1	150039930	150039930	+	Missense_Mutation	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VSTM2A	222008	broad.mit.edu	37	7	54610349	54610349	+	5'UTR	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WBSCR28	135886	broad.mit.edu	37	7	73279758	73279758	+	Intron	SNP	G	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDFY3	23001	broad.mit.edu	37	4	85660237	85660237	+	Missense_Mutation	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR12	55759	broad.mit.edu	37	2	203748851	203748851	+	Intron	SNP	T	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR17	116966	broad.mit.edu	37	4	177061073	177061073	+	Missense_Mutation	SNP	T	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR49	151790	broad.mit.edu	37	3	167217936	167217936	+	Intron	SNP	C	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR62	284403	broad.mit.edu	37	19	36582094	36582094	+	Intron	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR70	55100	broad.mit.edu	37	5	37726964	37726964	+	Intron	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR91	29062	broad.mit.edu	37	7	134873387	134873387	+	Intron	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNK4	65266	broad.mit.edu	37	17	40933017	40933017	+	Missense_Mutation	SNP	A	G	G			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNT8B	7479	broad.mit.edu	37	10	102242208	102242208	+	Missense_Mutation	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XCL1	6375	broad.mit.edu	37	1	168549359	168549359	+	Silent	SNP	G	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XCL2	6846	broad.mit.edu	37	1	168511287	168511287	+	Silent	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XDH	7498	broad.mit.edu	37	2	31611101	31611101	+	Missense_Mutation	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIRP2	129446	broad.mit.edu	37	2	167759983	167759983	+	5'UTR	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIRP2	129446	broad.mit.edu	37	2	167760502	167760502	+	Intron	SNP	G	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPNPEP1	7511	broad.mit.edu	37	10	111628590	111628590	+	Intron	SNP	G	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPO7	23039	broad.mit.edu	37	8	21860812	21860812	+	Missense_Mutation	SNP	T	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YTHDC1	91746	broad.mit.edu	37	4	69197847	69197847	+	Nonsense_Mutation	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBED1	9189	broad.mit.edu	37	X	2406876	2406877	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBED1	9189	broad.mit.edu	37	X	2407791	2407791	+	Nonsense_Mutation	SNP	G	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3H18	124245	broad.mit.edu	37	16	88690964	88690964	+	Intron	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3H3	23144	broad.mit.edu	37	8	144620288	144620288	+	Missense_Mutation	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3H3	23144	broad.mit.edu	37	8	144621362	144621362	+	Missense_Mutation	SNP	G	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3HC1	51530	broad.mit.edu	37	7	129665899	129665899	+	Intron	SNP	G	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZDHHC14	79683	broad.mit.edu	37	6	158066744	158066744	+	Intron	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZDHHC9	51114	broad.mit.edu	37	X	128975781	128975781	+	Silent	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZIC3	7547	broad.mit.edu	37	X	136650988	136650988	+	Intron	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMIZ2	83637	broad.mit.edu	37	7	44803065	44803065	+	Intron	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF107	51427	broad.mit.edu	37	7	64167304	64167304	+	Missense_Mutation	SNP	A	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF304	57343	broad.mit.edu	37	19	57868358	57868358	+	Missense_Mutation	SNP	G	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF318	24149	broad.mit.edu	37	6	43307502	43307502	+	Missense_Mutation	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF439	90594	broad.mit.edu	37	19	11978562	11978562	+	Silent	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF492	57615	broad.mit.edu	37	19	22847981	22847981	+	Missense_Mutation	SNP	C	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF662	389114	broad.mit.edu	37	3	42949613	42949613	+	Missense_Mutation	SNP	G	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF688	146542	broad.mit.edu	37	16	30583418	30583418	+	5'UTR	SNP	T	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF705A	440077	broad.mit.edu	37	12	8329650	8329650	+	Missense_Mutation	SNP	G	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF721	170960	broad.mit.edu	37	4	437409	437409	+	Missense_Mutation	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZP4	57829	broad.mit.edu	37	1	238050259	238050259	+	Intron	SNP	T	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZWINT	11130	broad.mit.edu	37	10	58119843	58119843	+	Missense_Mutation	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22592057	22592057	+	Intron	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	39567724	39567724	+	RNA	SNP	G	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	14218424	14218424	+	5'Flank	SNP	T	C	C	rs147131293	by1000genomes	TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	8178910	8178910	+	Intron	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89309965	89309965	+	Intron	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89320134	89320134	+	Intron	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90211710	90211710	+	Intron	SNP	G	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142157848	142157848	+	Intron	SNP	A	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142161986	142161986	+	Intron	SNP	G	T	T			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142239925	142239925	+	Intron	SNP	T	C	C			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142468330	142468330	+	Intron	SNP	C	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	55840930	55840931	+	RNA	INS	-	A	A			TCGA-50-6593-01A-11D-1753-08	TCGA-50-6593-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
