Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
AASDH	132949	broad.mit.edu	37	4	57217624	57217624	+	Splice_Site	SNP	C	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA12	26154	broad.mit.edu	37	2	215862467	215862467	+	Silent	SNP	A	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACACA	31	broad.mit.edu	37	17	35506652	35506652	+	Intron	SNP	T	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACAD10	80724	broad.mit.edu	37	12	112174763	112174763	+	Missense_Mutation	SNP	C	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACAD9	28976	broad.mit.edu	37	3	128598331	128598331	+	5'Flank	SNP	C	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACRC	93953	broad.mit.edu	37	X	70823472	70823472	+	Silent	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACRC	93953	broad.mit.edu	37	X	70832808	70832808	+	Silent	SNP	G	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM2A	123876	broad.mit.edu	37	16	20491954	20491954	+	Silent	SNP	G	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM2B	348158	broad.mit.edu	37	16	20554525	20554525	+	Silent	SNP	C	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS10	81794	broad.mit.edu	37	19	8666048	8666048	+	Intron	SNP	C	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS5	11096	broad.mit.edu	37	21	28337760	28337760	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY2	108	broad.mit.edu	37	5	7820842	7820842	+	Intron	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADD2	119	broad.mit.edu	37	2	70906031	70906031	+	Missense_Mutation	SNP	A	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADORA1	134	broad.mit.edu	37	1	203134690	203134690	+	Missense_Mutation	SNP	G	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFAP1	60312	broad.mit.edu	37	4	7857263	7857263	+	Silent	SNP	G	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFF2	2334	broad.mit.edu	37	X	147744260	147744260	+	Frame_Shift_Del	DEL	C	-	-			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFF2	2334	broad.mit.edu	37	X	148048333	148048333	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGFG2	3268	broad.mit.edu	37	7	100161345	100161345	+	Intron	SNP	A	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK2	113146	broad.mit.edu	37	14	105412026	105412026	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK2	113146	broad.mit.edu	37	14	105412521	105412521	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKR1C2	1646	broad.mit.edu	37	10	5043657	5043657	+	Intron	SNP	A	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALPI	248	broad.mit.edu	37	2	233322813	233322813	+	Missense_Mutation	SNP	A	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMICA1	120425	broad.mit.edu	37	11	118068676	118068676	+	Intron	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMOT	154796	broad.mit.edu	37	X	112024258	112024258	+	Nonsense_Mutation	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMOT	154796	broad.mit.edu	37	X	112058796	112058796	+	Silent	SNP	C	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANGEL2	90806	broad.mit.edu	37	1	213186785	213186785	+	Intron	SNP	G	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK2	287	broad.mit.edu	37	4	114254323	114254323	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO1	55107	broad.mit.edu	37	11	69933828	69933828	+	Intron	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APBA2	321	broad.mit.edu	37	15	29409425	29409425	+	3'UTR	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF37	389337	broad.mit.edu	37	5	149008426	149008426	+	Missense_Mutation	SNP	G	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARIH1	25820	broad.mit.edu	37	15	72859047	72859047	+	Intron	SNP	A	T	T	rs138966710	by1000genomes	TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARMC3	219681	broad.mit.edu	37	10	23297778	23297778	+	Missense_Mutation	SNP	T	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATAD2B	54454	broad.mit.edu	37	2	23980357	23980357	+	Missense_Mutation	SNP	A	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP10D	57205	broad.mit.edu	37	4	47565645	47565645	+	Missense_Mutation	SNP	A	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP11A	23250	broad.mit.edu	37	13	113487067	113487067	+	Intron	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP13A4	84239	broad.mit.edu	37	3	193185342	193185342	+	Intron	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2C1	27032	broad.mit.edu	37	3	130682828	130682828	+	Missense_Mutation	SNP	G	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATRX	546	broad.mit.edu	37	X	76845335	76845335	+	Silent	SNP	T	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AZI1	22994	broad.mit.edu	37	17	79165040	79165040	+	Silent	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAI2	576	broad.mit.edu	37	1	32197007	32197007	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCL10	8915	broad.mit.edu	37	1	85736391	85736391	+	Missense_Mutation	SNP	T	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BGLAP	632	broad.mit.edu	37	1	156212901	156212901	+	Missense_Mutation	SNP	C	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BIRC6	57448	broad.mit.edu	37	2	32706530	32706530	+	Intron	SNP	C	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMPR1B	658	broad.mit.edu	37	4	96070172	96070172	+	Intron	SNP	C	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BNC2	54796	broad.mit.edu	37	9	16437347	16437347	+	Missense_Mutation	SNP	A	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRCA2	675	broad.mit.edu	37	13	32907276	32907276	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRD4	23476	broad.mit.edu	37	19	15360069	15360072	+	Intron	DEL	ATTA	-	-			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRS3	680	broad.mit.edu	37	X	135574142	135574142	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRSK1	84446	broad.mit.edu	37	19	55814218	55814218	+	Silent	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRWD3	254065	broad.mit.edu	37	X	79932535	79932535	+	Missense_Mutation	SNP	C	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRWD3	254065	broad.mit.edu	37	X	79939515	79939515	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTK	695	broad.mit.edu	37	X	100613365	100613365	+	Nonsense_Mutation	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTNL3	10917	broad.mit.edu	37	5	180424111	180424111	+	Intron	SNP	G	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf78	119392	broad.mit.edu	37	10	105883551	105883553	+	In_Frame_Del	DEL	TTA	-	-			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf79	80217	broad.mit.edu	37	10	105985209	105985209	+	Intron	SNP	T	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf9	745	broad.mit.edu	37	11	61544847	61544847	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf89	284184	broad.mit.edu	37	17	79214822	79214822	+	3'UTR	SNP	A	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C18orf34	374864	broad.mit.edu	37	18	30913319	30913319	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf112	55732	broad.mit.edu	37	1	169773439	169773439	+	Intron	SNP	A	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf150	148823	broad.mit.edu	37	1	247737774	247737774	+	3'UTR	SNP	A	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf26	26074	broad.mit.edu	37	20	20168807	20168807	+	Intron	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf26	26074	broad.mit.edu	37	20	20246079	20246079	+	Intron	SNP	T	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2CD2	25966	broad.mit.edu	37	21	43319393	43319393	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf34	79823	broad.mit.edu	37	2	44970769	44970769	+	Missense_Mutation	SNP	G	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf167	253714	broad.mit.edu	37	6	97726798	97726798	+	Intron	SNP	G	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf192	116843	broad.mit.edu	37	6	133100440	133100440	+	Silent	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf97	80129	broad.mit.edu	37	6	151869438	151869438	+	Splice_Site	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf10	79783	broad.mit.edu	37	7	40193438	40193438	+	Intron	SNP	G	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1E	777	broad.mit.edu	37	1	181726319	181726319	+	Intron	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CADPS2	93664	broad.mit.edu	37	7	121985606	121985606	+	Intron	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMK2B	816	broad.mit.edu	37	7	44272474	44272474	+	Intron	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPN3	825	broad.mit.edu	37	15	42678003	42678003	+	Intron	SNP	G	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASP14	23581	broad.mit.edu	37	19	15164396	15164396	+	Missense_Mutation	SNP	G	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CBLN4	140689	broad.mit.edu	37	20	54573585	54573585	+	3'UTR	SNP	T	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC88A	55704	broad.mit.edu	37	2	55561797	55561797	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCKAR	886	broad.mit.edu	37	4	26484573	26484573	+	Intron	SNP	C	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD163L1	283316	broad.mit.edu	37	12	7586276	7586276	+	Nonsense_Mutation	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH12	1010	broad.mit.edu	37	5	21765020	21765020	+	Intron	SNP	G	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH7	1005	broad.mit.edu	37	18	63477091	63477091	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDKAL1	54901	broad.mit.edu	37	6	20546821	20546821	+	Intron	SNP	G	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDYL	9425	broad.mit.edu	37	6	4892352	4892352	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CENPI	2491	broad.mit.edu	37	X	100403112	100403113	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFTR	1080	broad.mit.edu	37	7	117242773	117242773	+	Intron	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHIT1	1118	broad.mit.edu	37	1	203194938	203194938	+	Missense_Mutation	SNP	G	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRM4	1132	broad.mit.edu	37	11	46407047	46407047	+	Missense_Mutation	SNP	A	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRNA9	55584	broad.mit.edu	37	4	40339156	40339156	+	Intron	SNP	A	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CIB4	130106	broad.mit.edu	37	2	26863485	26863485	+	Intron	SNP	G	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC4F	165530	broad.mit.edu	37	2	71043658	71043658	+	Missense_Mutation	SNP	G	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNDP1	84735	broad.mit.edu	37	18	72228242	72228242	+	Missense_Mutation	SNP	C	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNOT6	57472	broad.mit.edu	37	5	179996154	179996154	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNPY3	10695	broad.mit.edu	37	6	42905438	42905438	+	Intron	SNP	C	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNPY3	10695	broad.mit.edu	37	6	42905451	42905451	+	Intron	SNP	C	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNR2	1269	broad.mit.edu	37	1	24201958	24201958	+	Silent	SNP	C	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN4	152330	broad.mit.edu	37	3	3072687	3072687	+	Intron	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN5	53942	broad.mit.edu	37	11	100211835	100211835	+	Missense_Mutation	SNP	A	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP5	129684	broad.mit.edu	37	2	124783218	124783218	+	5'UTR	SNP	C	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL3A1	1281	broad.mit.edu	37	2	189873816	189873816	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A3	50509	broad.mit.edu	37	19	10081551	10081551	+	Intron	SNP	T	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL6A3	1293	broad.mit.edu	37	2	238234302	238234302	+	Missense_Mutation	SNP	G	A	A	rs147533489	byFrequency	TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COLEC11	78989	broad.mit.edu	37	2	3673659	3673659	+	Intron	SNP	C	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CORO1C	23603	broad.mit.edu	37	12	109042258	109042258	+	Intron	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPXCR1	53336	broad.mit.edu	37	X	88008550	88008550	+	Missense_Mutation	SNP	A	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPZ	8532	broad.mit.edu	37	4	8621204	8621204	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CR1L	1379	broad.mit.edu	37	1	207883741	207883741	+	Intron	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRISP1	167	broad.mit.edu	37	6	49819667	49819667	+	Intron	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRISP3	10321	broad.mit.edu	37	6	49699034	49699034	+	Intron	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CROCC	9696	broad.mit.edu	37	1	17292317	17292317	+	Missense_Mutation	SNP	T	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRTAM	56253	broad.mit.edu	37	11	122720770	122720770	+	Intron	SNP	C	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD2	114784	broad.mit.edu	37	1	34038007	34038007	+	Intron	SNP	C	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD2	114784	broad.mit.edu	37	1	34049032	34049032	+	Intron	SNP	A	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113651094	113651094	+	Silent	SNP	G	A	A	rs145905619		TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTDSPL2	51496	broad.mit.edu	37	15	44806806	44806806	+	Missense_Mutation	SNP	G	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNBL1	56259	broad.mit.edu	37	20	36361518	36361518	+	Intron	SNP	C	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNND2	1501	broad.mit.edu	37	5	10981975	10981975	+	Intron	SNP	A	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNND2	1501	broad.mit.edu	37	5	11159798	11159798	+	Silent	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUBN	8029	broad.mit.edu	37	10	16970156	16970156	+	Missense_Mutation	SNP	T	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DBF4B	80174	broad.mit.edu	37	17	42818613	42818613	+	Intron	SNP	C	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DBF4B	80174	broad.mit.edu	37	17	42825784	42825784	+	Silent	SNP	C	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DBF4B	80174	broad.mit.edu	37	17	42827879	42827879	+	Intron	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DBR1	51163	broad.mit.edu	37	3	137881363	137881363	+	Missense_Mutation	SNP	G	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DBR1	51163	broad.mit.edu	37	3	137882759	137882759	+	Intron	SNP	C	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCDC2	51473	broad.mit.edu	37	6	24205198	24205198	+	Intron	SNP	C	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCLK2	166614	broad.mit.edu	37	4	151153986	151153986	+	Intron	SNP	T	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND3	22898	broad.mit.edu	37	8	142195205	142195205	+	Intron	SNP	C	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGAT2L6	347516	broad.mit.edu	37	X	69421829	69421829	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGAT2L6	347516	broad.mit.edu	37	X	69424475	69424475	+	Intron	SNP	G	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIP2C	22982	broad.mit.edu	37	10	395293	395293	+	Silent	SNP	G	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMD	1756	broad.mit.edu	37	X	31462517	31462517	+	Intron	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMP1	1758	broad.mit.edu	37	4	88583361	88583361	+	Missense_Mutation	SNP	T	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMXL1	1657	broad.mit.edu	37	5	118533728	118533728	+	Intron	SNP	G	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH11	8701	broad.mit.edu	37	7	21745109	21745109	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNALI1	7802	broad.mit.edu	37	1	38027131	38027131	+	Intron	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK2	1794	broad.mit.edu	37	5	169126310	169126310	+	Intron	SNP	T	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPY19L2	283417	broad.mit.edu	37	12	63974596	63974596	+	Silent	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSP	1832	broad.mit.edu	37	6	7563904	7563904	+	Intron	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP27	92235	broad.mit.edu	37	1	167097069	167097069	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNC2LI1	51626	broad.mit.edu	37	2	44023920	44023921	+	Missense_Mutation	DNP	GG	CT	CT			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
E2F7	144455	broad.mit.edu	37	12	77424063	77424063	+	Missense_Mutation	SNP	C	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EBF1	1879	broad.mit.edu	37	5	158422364	158422364	+	Intron	SNP	A	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ECD	11319	broad.mit.edu	37	10	74898992	74898992	+	Intron	SNP	G	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ECM1	1893	broad.mit.edu	37	1	150484952	150484952	+	Missense_Mutation	SNP	C	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EHF	26298	broad.mit.edu	37	11	34668199	34668199	+	Missense_Mutation	SNP	T	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELAC2	60528	broad.mit.edu	37	17	12914910	12914910	+	Intron	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELN	2006	broad.mit.edu	37	7	73480297	73480297	+	Silent	SNP	C	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EMP2	2013	broad.mit.edu	37	16	10641523	10641523	+	5'UTR	SNP	G	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EMR3	84658	broad.mit.edu	37	19	14743590	14743590	+	Intron	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENTPD6	955	broad.mit.edu	37	20	25199194	25199194	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB41L3	23136	broad.mit.edu	37	18	5419763	5419763	+	Missense_Mutation	SNP	G	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB41L5	57669	broad.mit.edu	37	2	120849214	120849214	+	Missense_Mutation	SNP	C	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPC1	80314	broad.mit.edu	37	10	32573955	32573955	+	Missense_Mutation	SNP	G	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA6	285220	broad.mit.edu	37	3	97356765	97356765	+	Missense_Mutation	SNP	G	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERBB3	2065	broad.mit.edu	37	12	56489093	56489093	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EREG	2069	broad.mit.edu	37	4	75230974	75230974	+	5'UTR	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESRRG	2104	broad.mit.edu	37	1	216850421	216850421	+	Nonsense_Mutation	SNP	G	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOC6B	23233	broad.mit.edu	37	2	72968242	72968242	+	Intron	SNP	A	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EYS	346007	broad.mit.edu	37	6	66063453	66063453	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F8	2157	broad.mit.edu	37	X	154221303	154221303	+	Frame_Shift_Del	DEL	G	-	-			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F8	2157	broad.mit.edu	37	X	154225290	154225290	+	Missense_Mutation	SNP	T	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FADS2	9415	broad.mit.edu	37	11	61632769	61632769	+	Intron	SNP	A	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM129C	199786	broad.mit.edu	37	19	17641793	17641793	+	Intron	SNP	C	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM134A	79137	broad.mit.edu	37	2	220045854	220045854	+	Missense_Mutation	SNP	G	T	T	rs149941380	byFrequency;by1000genomes	TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM162B	221303	broad.mit.edu	37	6	117086432	117086432	+	Intron	SNP	A	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM86B1	85002	broad.mit.edu	37	8	12040325	12040325	+	3'UTR	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM90A1	55138	broad.mit.edu	37	12	8374359	8374359	+	3'UTR	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT2	2196	broad.mit.edu	37	5	150930994	150930994	+	Intron	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBLN2	2199	broad.mit.edu	37	3	13659609	13659609	+	Missense_Mutation	SNP	T	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBLN5	10516	broad.mit.edu	37	14	92343783	92343783	+	Intron	SNP	A	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCN1	2219	broad.mit.edu	37	9	137805525	137805525	+	Intron	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FDX1L	112812	broad.mit.edu	37	19	10421173	10421173	+	Missense_Mutation	SNP	T	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FDX1L	112812	broad.mit.edu	37	19	10421195	10421195	+	Missense_Mutation	SNP	G	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGF14	2259	broad.mit.edu	37	13	102378842	102378842	+	Intron	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FHL2	2274	broad.mit.edu	37	2	106013203	106013203	+	5'UTR	SNP	G	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152286049	152286049	+	Missense_Mutation	SNP	G	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMNL3	91010	broad.mit.edu	37	12	50045755	50045755	+	Missense_Mutation	SNP	G	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMO1	2326	broad.mit.edu	37	1	171252251	171252251	+	Intron	SNP	T	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOLH1	2346	broad.mit.edu	37	11	49204841	49204841	+	Intron	SNP	C	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMPD4	9758	broad.mit.edu	37	X	12722577	12722577	+	Silent	SNP	T	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSTL1	11167	broad.mit.edu	37	3	120118703	120118703	+	Intron	SNP	T	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FZR1	51343	broad.mit.edu	37	19	3525945	3525945	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAA	2548	broad.mit.edu	37	17	78078846	78078846	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABPA	2551	broad.mit.edu	37	21	27135314	27135314	+	Intron	SNP	G	T	T	rs148104793	by1000genomes	TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRA2	2555	broad.mit.edu	37	4	46252306	46252306	+	3'UTR	SNP	A	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRA6	2559	broad.mit.edu	37	5	161128675	161128675	+	Missense_Mutation	SNP	T	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRB1	2560	broad.mit.edu	37	4	47322141	47322141	+	Intron	SNP	C	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRB1	2560	broad.mit.edu	37	4	47408881	47408881	+	Missense_Mutation	SNP	G	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GATA3	2625	broad.mit.edu	37	10	8111435	8111435	+	Splice_Site	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GFM1	85476	broad.mit.edu	37	3	158380533	158380533	+	Intron	SNP	A	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GFRAL	389400	broad.mit.edu	37	6	55196432	55196432	+	Intron	SNP	C	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLIS3	169792	broad.mit.edu	37	9	4286471	4286471	+	5'UTR	SNP	A	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLRA2	2742	broad.mit.edu	37	X	14625540	14625540	+	Intron	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GMDS	2762	broad.mit.edu	37	6	2117864	2117864	+	Intron	SNP	T	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GMFG	9535	broad.mit.edu	37	19	39823874	39823874	+	Intron	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLGA2	2801	broad.mit.edu	37	9	131028029	131028029	+	Intron	SNP	T	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GORASP2	26003	broad.mit.edu	37	2	171806689	171806689	+	Intron	SNP	A	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPNMB	10457	broad.mit.edu	37	7	23306249	23306249	+	Intron	SNP	G	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR115	221393	broad.mit.edu	37	6	47682229	47682229	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR123	84435	broad.mit.edu	37	10	134886307	134886308	+	Intron	DNP	GG	TT	TT			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR143	4935	broad.mit.edu	37	X	9693874	9693874	+	Missense_Mutation	SNP	T	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR158	57512	broad.mit.edu	37	10	25684824	25684824	+	Intron	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR158	57512	broad.mit.edu	37	10	25887711	25887711	+	Silent	SNP	T	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIPAP1	56850	broad.mit.edu	37	X	48840352	48840352	+	Intron	SNP	C	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM1	2911	broad.mit.edu	37	6	146673535	146673535	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GZMK	3003	broad.mit.edu	37	5	54329521	54329521	+	Intron	SNP	C	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC9	9734	broad.mit.edu	37	7	18767433	18767433	+	Intron	SNP	G	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HELZ	9931	broad.mit.edu	37	17	65082999	65082999	+	Missense_Mutation	SNP	G	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC4	26091	broad.mit.edu	37	10	69699479	69699480	+	Intron	DEL	AT	-	-			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEY2	23493	broad.mit.edu	37	6	126080924	126080924	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H3D	8351	broad.mit.edu	37	6	26199486	26199486	+	5'Flank	SNP	A	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HLCS	3141	broad.mit.edu	37	21	38308720	38308720	+	Intron	SNP	G	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMCN1	83872	broad.mit.edu	37	1	185959285	185959285	+	Intron	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMCN1	83872	broad.mit.edu	37	1	185964275	185964275	+	Intron	SNP	C	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMCN1	83872	broad.mit.edu	37	1	186055633	186055633	+	Intron	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HS3ST5	222537	broad.mit.edu	37	6	114379241	114379241	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSD17B2	3294	broad.mit.edu	37	16	82068949	82068949	+	5'UTR	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HUWE1	10075	broad.mit.edu	37	X	53607798	53607798	+	Silent	SNP	T	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HUWE1	10075	broad.mit.edu	37	X	53652829	53652852	+	Intron	DEL	GCCGGGGCCGGGGCCGGGGCCGGT	-	-	rs78801842	by1000genomes	TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HYDIN	54768	broad.mit.edu	37	16	70896074	70896074	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IDS	3423	broad.mit.edu	37	X	148586522	148586522	+	Intron	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFT81	28981	broad.mit.edu	37	12	110574609	110574609	+	Missense_Mutation	SNP	G	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGDCC3	9543	broad.mit.edu	37	15	65621915	65621915	+	Missense_Mutation	SNP	A	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGFN1	91156	broad.mit.edu	37	1	201184736	201184736	+	Missense_Mutation	SNP	C	T	T	rs149837907	by1000genomes	TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF11	152404	broad.mit.edu	37	3	118644931	118644931	+	Intron	SNP	A	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF1	3547	broad.mit.edu	37	X	130420644	130420644	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF3	3321	broad.mit.edu	37	1	117150688	117150688	+	Silent	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IK	3550	broad.mit.edu	37	5	140031639	140031639	+	Intron	SNP	A	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1F5	26525	broad.mit.edu	37	2	113820007	113820007	+	Intron	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IMPG2	50939	broad.mit.edu	37	3	100964568	100964568	+	Intron	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INHBA	3624	broad.mit.edu	37	7	41739733	41739733	+	Silent	SNP	C	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INPP5D	3635	broad.mit.edu	37	2	234106843	234106843	+	Silent	SNP	C	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INTS3	65123	broad.mit.edu	37	1	153701264	153701264	+	Intron	SNP	G	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQCD	115811	broad.mit.edu	37	12	113645421	113645421	+	Missense_Mutation	SNP	A	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQGAP3	128239	broad.mit.edu	37	1	156508834	156508834	+	Intron	SNP	T	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQSEC1	9922	broad.mit.edu	37	3	12944171	12944171	+	Intron	SNP	A	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGB1BP3	27231	broad.mit.edu	37	19	3937323	3937323	+	Intron	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITIH5	80760	broad.mit.edu	37	10	7618929	7618929	+	Missense_Mutation	SNP	C	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JAK1	3716	broad.mit.edu	37	1	65307190	65307190	+	Missense_Mutation	SNP	T	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KANK4	163782	broad.mit.edu	37	1	62740219	62740219	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNB2	9312	broad.mit.edu	37	8	73480420	73480420	+	Missense_Mutation	SNP	G	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH1	3756	broad.mit.edu	37	1	211192154	211192154	+	Missense_Mutation	SNP	G	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNJ4	3761	broad.mit.edu	37	22	38823842	38823842	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNK2	3776	broad.mit.edu	37	1	215368231	215368231	+	Intron	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNS3	3790	broad.mit.edu	37	2	18113214	18113214	+	Silent	SNP	A	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM5B	10765	broad.mit.edu	37	1	202743725	202743725	+	Intron	SNP	G	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM6B	23135	broad.mit.edu	37	17	7752153	7752153	+	Silent	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0556	23247	broad.mit.edu	37	16	27715463	27715463	+	Intron	SNP	A	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF13B	23303	broad.mit.edu	37	8	29023195	29023195	+	Missense_Mutation	SNP	G	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF13B	23303	broad.mit.edu	37	8	29023330	29023330	+	Intron	SNP	G	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF26B	55083	broad.mit.edu	37	1	245530037	245530037	+	Intron	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF27	55582	broad.mit.edu	37	9	86503413	86503413	+	Missense_Mutation	SNP	C	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL13	90293	broad.mit.edu	37	X	117033333	117033333	+	Silent	SNP	T	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRAS	3845	broad.mit.edu	37	12	25398285	25398285	+	Missense_Mutation	SNP	C	A	A	rs121913530		TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRI1	65095	broad.mit.edu	37	19	10665777	10665777	+	Silent	SNP	T	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT17	3872	broad.mit.edu	37	17	39778677	39778677	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP10-11	386678	broad.mit.edu	37	21	46067170	46067170	+	Silent	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP13-2	337959	broad.mit.edu	37	21	31743890	31743890	+	3'UTR	SNP	C	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP4-1	85285	broad.mit.edu	37	17	39340604	39340604	+	3'UTR	SNP	T	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP6-3	337968	broad.mit.edu	37	21	31964725	31964725	+	5'Flank	SNP	T	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA1	284217	broad.mit.edu	37	18	6986344	6986344	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA2	3908	broad.mit.edu	37	6	129250739	129250739	+	Intron	SNP	G	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA5	3911	broad.mit.edu	37	20	60927018	60927018	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCE2D	353141	broad.mit.edu	37	1	152636816	152636816	+	Missense_Mutation	SNP	C	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEPRE1	64175	broad.mit.edu	37	1	43213816	43213816	+	Intron	SNP	T	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGR5	8549	broad.mit.edu	37	12	71898271	71898271	+	Intron	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRB2	10288	broad.mit.edu	37	19	54782221	54782221	+	Missense_Mutation	SNP	C	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC100130331	100130331	broad.mit.edu	37	1	238090339	238090339	+	RNA	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC284232	284232	broad.mit.edu	37	13	19425905	19425905	+	RNA	SNP	T	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPHN3	23284	broad.mit.edu	37	4	62641291	62641291	+	Intron	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141460200	141460200	+	Intron	SNP	A	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141986802	141986802	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP4	4038	broad.mit.edu	37	11	46894892	46894892	+	Intron	DEL	C	-	-			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC16B	90668	broad.mit.edu	37	14	24523588	24523588	+	Intron	SNP	C	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC7	57554	broad.mit.edu	37	1	70226072	70226072	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LSM5	23658	broad.mit.edu	37	7	32528799	32528799	+	Intron	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LY75	4065	broad.mit.edu	37	2	160698699	160698700	+	Intron	DEL	TA	-	-	rs41265133	by1000genomes	TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MACF1	23499	broad.mit.edu	37	1	39827187	39827187	+	Frame_Shift_Del	DEL	G	-	-			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEA3	4102	broad.mit.edu	37	X	151935196	151935196	+	3'UTR	SNP	G	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEA4	4103	broad.mit.edu	37	X	151092363	151092363	+	Missense_Mutation	SNP	T	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGED2	10916	broad.mit.edu	37	X	54835717	54835717	+	Intron	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGOHB	55110	broad.mit.edu	37	12	10766174	10766174	+	5'UTR	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MANBA	4126	broad.mit.edu	37	4	103650054	103650054	+	Intron	SNP	G	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K4	4216	broad.mit.edu	37	6	161522878	161522878	+	Intron	SNP	A	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPKBP1	23005	broad.mit.edu	37	15	42109166	42109166	+	Silent	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCH6	10299	broad.mit.edu	37	5	10411648	10411648	+	Missense_Mutation	SNP	G	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARK1	4139	broad.mit.edu	37	1	220791808	220791808	+	Nonsense_Mutation	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MBD1	4152	broad.mit.edu	37	18	47800612	47800612	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MC5R	4161	broad.mit.edu	37	18	13825653	13825653	+	5'Flank	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCM3AP	8888	broad.mit.edu	37	21	47655246	47655246	+	Missense_Mutation	SNP	G	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED24	9862	broad.mit.edu	37	17	38179414	38179414	+	Silent	SNP	G	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED6	10001	broad.mit.edu	37	14	71052429	71052429	+	Intron	SNP	T	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MET	4233	broad.mit.edu	37	7	116339807	116339807	+	Silent	SNP	A	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MID2	11043	broad.mit.edu	37	X	107169847	107169847	+	Intron	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR519E	574463	broad.mit.edu	37	19	54183030	54183031	+	5'Flank	DNP	CT	AA	AA			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL5	55904	broad.mit.edu	37	7	104745898	104745898	+	Missense_Mutation	SNP	G	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLLT10	8028	broad.mit.edu	37	10	22022812	22022812	+	Missense_Mutation	SNP	A	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMAA	166785	broad.mit.edu	37	4	146560391	146560391	+	Missense_Mutation	SNP	C	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP17	4326	broad.mit.edu	37	12	132325033	132325033	+	Intron	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOCOS	55034	broad.mit.edu	37	18	33780309	33780309	+	Intron	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPHOSPH8	54737	broad.mit.edu	37	13	20221403	20221403	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRC1	4360	broad.mit.edu	37	10	17927574	17927574	+	Intron	SNP	A	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSLNL	401827	broad.mit.edu	37	16	830202	830202	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR1	8776	broad.mit.edu	37	X	149900973	149900973	+	Intron	SNP	C	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTO1	25821	broad.mit.edu	37	6	74207313	74207313	+	Intron	SNP	A	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9066581	9066581	+	Missense_Mutation	SNP	C	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC2	4583	broad.mit.edu	37	11	1083181	1083181	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUM1L1	139221	broad.mit.edu	37	X	105449798	105449798	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUM1	84939	broad.mit.edu	37	19	1364226	1364226	+	Intron	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUS81	80198	broad.mit.edu	37	11	65630743	65630743	+	Intron	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MXRA7	439921	broad.mit.edu	37	17	74673799	74673799	+	Intron	SNP	G	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH1	4619	broad.mit.edu	37	17	10411133	10411133	+	Intron	SNP	T	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYLK3	91807	broad.mit.edu	37	16	46764575	46764575	+	Missense_Mutation	SNP	G	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NALCN	259232	broad.mit.edu	37	13	101735600	101735600	+	Intron	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAP1L2	4674	broad.mit.edu	37	X	72434489	72434489	+	5'UTR	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF1	55672	broad.mit.edu	37	1	16893659	16893659	+	Intron	SNP	T	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCAPH	23397	broad.mit.edu	37	2	97008559	97008559	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDFIP1	80762	broad.mit.edu	37	5	141520014	141520014	+	Intron	DEL	A	-	-			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NELL1	4745	broad.mit.edu	37	11	21581993	21581993	+	Intron	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NELL2	4753	broad.mit.edu	37	12	45173407	45173407	+	Intron	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEO1	4756	broad.mit.edu	37	15	73541597	73541597	+	Intron	SNP	T	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NHSL2	340527	broad.mit.edu	37	X	71359765	71359765	+	Silent	SNP	C	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLGN3	54413	broad.mit.edu	37	X	70387665	70387665	+	Intron	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP5	126206	broad.mit.edu	37	19	56539603	56539603	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOL7	51406	broad.mit.edu	37	6	13617987	13617988	+	Intron	INS	-	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRAP	4892	broad.mit.edu	37	10	115371929	115371929	+	Intron	SNP	G	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRAS	4893	broad.mit.edu	37	1	115251098	115251098	+	Intron	SNP	T	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSDHL	50814	broad.mit.edu	37	X	152034484	152034484	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF3	56000	broad.mit.edu	37	X	102332726	102332726	+	Intron	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OBSL1	23363	broad.mit.edu	37	2	220434961	220434961	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR13C4	138804	broad.mit.edu	37	9	107288692	107288692	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2G3	81469	broad.mit.edu	37	1	247769097	247769097	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2M4	26245	broad.mit.edu	37	1	248402862	248402862	+	Missense_Mutation	SNP	T	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T11	127077	broad.mit.edu	37	1	248790027	248790027	+	Missense_Mutation	SNP	G	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4A16	81327	broad.mit.edu	37	11	55110823	55110823	+	Silent	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4C13	283092	broad.mit.edu	37	11	49974727	49974727	+	Silent	SNP	C	A	A	rs150732180		TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4S1	256148	broad.mit.edu	37	11	48328454	48328454	+	Nonsense_Mutation	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4X1	390113	broad.mit.edu	37	11	48285600	48285600	+	Missense_Mutation	SNP	A	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51A7	119687	broad.mit.edu	37	11	4928721	4928721	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51L1	119682	broad.mit.edu	37	11	5020560	5020561	+	Frame_Shift_Ins	INS	-	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR56A4	120793	broad.mit.edu	37	11	6023636	6023636	+	Missense_Mutation	SNP	G	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8J1	219477	broad.mit.edu	37	11	56128013	56128013	+	Nonsense_Mutation	SNP	T	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPOLB	56903	broad.mit.edu	37	7	4900091	4900091	+	Nonsense_Mutation	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA10	56139	broad.mit.edu	37	5	140235739	140235739	+	Missense_Mutation	SNP	G	A	A	rs147800828		TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB10	56126	broad.mit.edu	37	5	140573632	140573632	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB16	57717	broad.mit.edu	37	5	140562314	140562314	+	Silent	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB7	56129	broad.mit.edu	37	5	140554630	140554630	+	Missense_Mutation	SNP	C	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA2	56113	broad.mit.edu	37	5	140720308	140720308	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCGF2	7703	broad.mit.edu	37	17	36896531	36896531	+	Intron	DEL	C	-	-			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE11A	50940	broad.mit.edu	37	2	178879143	178879143	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDHA2	5161	broad.mit.edu	37	4	96762282	96762282	+	Silent	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZD7	79955	broad.mit.edu	37	10	102780300	102780300	+	Intron	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PFAS	5198	broad.mit.edu	37	17	8157323	8157323	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGPEP1L	145814	broad.mit.edu	37	15	99514147	99514147	+	Intron	SNP	T	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHEX	5251	broad.mit.edu	37	X	22094595	22094595	+	Intron	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHEX	5251	broad.mit.edu	37	X	22132530	22132530	+	Intron	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHRF1	57661	broad.mit.edu	37	11	597358	597358	+	Intron	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PI4KB	5298	broad.mit.edu	37	1	151280153	151280153	+	Missense_Mutation	SNP	T	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIGU	128869	broad.mit.edu	37	20	33162841	33162841	+	Intron	SNP	C	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIWIL1	9271	broad.mit.edu	37	12	130841526	130841526	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD1L1	168507	broad.mit.edu	37	7	47847825	47847825	+	Intron	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD1L2	114780	broad.mit.edu	37	16	81199372	81199372	+	Intron	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD2L2	27039	broad.mit.edu	37	5	137225063	137225063	+	5'Flank	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2G4A	5321	broad.mit.edu	37	1	186823505	186823505	+	Missense_Mutation	SNP	T	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCB3	5331	broad.mit.edu	37	11	64023116	64023116	+	Intron	SNP	T	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEC	5339	broad.mit.edu	37	8	145010135	145010143	+	In_Frame_Del	DEL	CTTGGCCGT	-	-			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHG1	57480	broad.mit.edu	37	6	151152182	151152182	+	Silent	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHG2	64857	broad.mit.edu	37	19	39907024	39907024	+	Silent	SNP	C	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA3	55558	broad.mit.edu	37	X	153695419	153695419	+	Missense_Mutation	SNP	G	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PMFBP1	83449	broad.mit.edu	37	16	72159911	72159911	+	Missense_Mutation	SNP	T	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNLIPRP3	119548	broad.mit.edu	37	10	118199151	118199151	+	Intron	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLA2	23649	broad.mit.edu	37	11	65055391	65055391	+	Intron	SNP	G	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR2A	5430	broad.mit.edu	37	17	7406039	7406039	+	Intron	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POM121	9883	broad.mit.edu	37	7	72397319	72397319	+	Intron	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POU3F4	5456	broad.mit.edu	37	X	82763325	82763325	+	5'UTR	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPEF1	5475	broad.mit.edu	37	X	18802186	18802186	+	Intron	SNP	T	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPHLN1	51535	broad.mit.edu	37	12	42681180	42681181	+	Intron	DNP	GG	TT	TT			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R3F	89801	broad.mit.edu	37	X	49127100	49127100	+	Silent	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R3A	5523	broad.mit.edu	37	3	135721504	135721504	+	Silent	SNP	A	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPWD1	23398	broad.mit.edu	37	5	64875260	64875260	+	Silent	SNP	G	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PQLC1	80148	broad.mit.edu	37	18	77679496	77679496	+	Intron	SNP	G	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRAME	23532	broad.mit.edu	37	22	22890449	22890449	+	3'UTR	SNP	T	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRAME	23532	broad.mit.edu	37	22	22893228	22893228	+	Missense_Mutation	SNP	T	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM10	56980	broad.mit.edu	37	11	129794872	129794872	+	Missense_Mutation	SNP	G	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKAG2	51422	broad.mit.edu	37	7	151261298	151261298	+	Nonsense_Mutation	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRPF19	27339	broad.mit.edu	37	11	60658726	60658726	+	Missense_Mutation	SNP	C	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRSS35	167681	broad.mit.edu	37	6	84233922	84233922	+	Silent	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSD2	84249	broad.mit.edu	37	5	139218122	139218122	+	Intron	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG1	5669	broad.mit.edu	37	19	43376393	43376393	+	Intron	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG8	440533	broad.mit.edu	37	19	43262242	43262242	+	Silent	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSIP1	11168	broad.mit.edu	37	9	15472678	15472678	+	Missense_Mutation	SNP	T	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSME4	23198	broad.mit.edu	37	2	54120044	54120044	+	Missense_Mutation	SNP	T	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTCH1	5727	broad.mit.edu	37	9	98209232	98209232	+	Nonsense_Mutation	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTDSS1	9791	broad.mit.edu	37	8	97299302	97299302	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTGER3	5733	broad.mit.edu	37	1	71331544	71331544	+	Intron	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTH2R	5746	broad.mit.edu	37	2	209307271	209307271	+	Intron	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN18	26469	broad.mit.edu	37	2	131127758	131127758	+	Silent	SNP	C	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRS	5802	broad.mit.edu	37	19	5210581	5210581	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRZ1	5803	broad.mit.edu	37	7	121682660	121682660	+	Splice_Site	SNP	A	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB9B	51209	broad.mit.edu	37	X	103080712	103080712	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAPGEF2	9693	broad.mit.edu	37	4	160275067	160275067	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASGRF2	5924	broad.mit.edu	37	5	80382859	80382859	+	Intron	SNP	G	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBBP8	5932	broad.mit.edu	37	18	20577615	20577615	+	Silent	SNP	A	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBMX	27316	broad.mit.edu	37	X	135960160	135960160	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS7	6000	broad.mit.edu	37	1	241032264	241032264	+	Intron	SNP	T	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHOXF1	158800	broad.mit.edu	37	X	119249586	119249586	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF133	168433	broad.mit.edu	37	7	122338100	122338100	+	Silent	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF32	140545	broad.mit.edu	37	7	156468537	156468537	+	Missense_Mutation	SNP	T	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNGTT	8732	broad.mit.edu	37	6	89638989	89638989	+	Intron	DEL	A	-	-	rs111616936		TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNPEP	6051	broad.mit.edu	37	1	201966378	201966378	+	Intron	SNP	A	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROCK2	9475	broad.mit.edu	37	2	11332269	11332273	+	Splice_Site	DEL	ATTAC	-	-			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR1	6261	broad.mit.edu	37	19	39002837	39002837	+	Intron	SNP	C	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237550707	237550707	+	Intron	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237982600	237982600	+	Intron	SNP	C	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237991774	237991774	+	Intron	SNP	C	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SASH3	54440	broad.mit.edu	37	X	128927572	128927572	+	Intron	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCGB1C1	147199	broad.mit.edu	37	11	193795	193795	+	Nonsense_Mutation	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN10A	6336	broad.mit.edu	37	3	38764763	38764763	+	Intron	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC14L1	6397	broad.mit.edu	37	17	75187325	75187325	+	Silent	SNP	T	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA6B	10501	broad.mit.edu	37	19	4558196	4558196	+	Intron	SNP	G	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA6D	80031	broad.mit.edu	37	15	48063372	48063372	+	Missense_Mutation	SNP	G	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SENP7	57337	broad.mit.edu	37	3	101176556	101176556	+	Intron	SNP	C	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERAC1	84947	broad.mit.edu	37	6	158549110	158549110	+	Intron	SNP	T	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINE2	5270	broad.mit.edu	37	2	224856464	224856464	+	Intron	SNP	A	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFXN5	94097	broad.mit.edu	37	2	73215352	73215352	+	Intron	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGSM1	129049	broad.mit.edu	37	22	25251480	25251480	+	Intron	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3PXD2B	285590	broad.mit.edu	37	5	171765673	171765673	+	Silent	SNP	C	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHPK	23729	broad.mit.edu	37	17	3524528	3524528	+	Intron	SNP	T	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIT1	27240	broad.mit.edu	37	9	35649866	35649866	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SKI	6497	broad.mit.edu	37	1	2234776	2234776	+	Missense_Mutation	SNP	C	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SKP2	6502	broad.mit.edu	37	5	36183971	36183971	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLAMF7	57823	broad.mit.edu	37	1	160719949	160719949	+	Intron	SNP	C	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC17A8	246213	broad.mit.edu	37	12	100797998	100797998	+	Intron	SNP	A	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC24A2	25769	broad.mit.edu	37	9	19550264	19550264	+	Silent	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A13	10165	broad.mit.edu	37	7	95814398	95814398	+	Intron	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A21	89874	broad.mit.edu	37	14	37154021	37154021	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC27A3	11000	broad.mit.edu	37	1	153747738	153747738	+	5'Flank	SNP	G	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC39A5	283375	broad.mit.edu	37	12	56629465	56629465	+	Missense_Mutation	SNP	G	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A10	125206	broad.mit.edu	37	17	18855481	18855481	+	5'UTR	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A2	6524	broad.mit.edu	37	16	31498858	31498858	+	Silent	SNP	C	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC7A3	84889	broad.mit.edu	37	X	70147433	70147433	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMCHD1	23347	broad.mit.edu	37	18	2656197	2656197	+	Silent	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMPD4	55627	broad.mit.edu	37	2	130931074	130931074	+	Intron	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMURF2	64750	broad.mit.edu	37	17	62574602	62574602	+	Intron	SNP	G	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD115-1	338433	broad.mit.edu	37	15	25415727	25415727	+	5'Flank	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD115-3	100033440	broad.mit.edu	37	15	25420002	25420002	+	5'Flank	SNP	C	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNRNP200	23020	broad.mit.edu	37	2	96953169	96953169	+	Intron	SNP	C	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS1	114815	broad.mit.edu	37	10	108447944	108447944	+	Intron	SNP	A	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPDYE4	388333	broad.mit.edu	37	17	8659558	8659558	+	Intron	SNP	G	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEG	10290	broad.mit.edu	37	2	220354009	220354010	+	Intron	INS	-	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPIC	121599	broad.mit.edu	37	12	101876581	101876581	+	Frame_Shift_Del	DEL	G	-	-			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPRYD5	84767	broad.mit.edu	37	11	55658932	55658932	+	Missense_Mutation	SNP	T	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158597480	158597480	+	Missense_Mutation	SNP	C	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRGAP2	23380	broad.mit.edu	37	1	206594684	206594684	+	Intron	SNP	C	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSX3	10214	broad.mit.edu	37	X	48207047	48207047	+	Intron	SNP	G	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSX3	10214	broad.mit.edu	37	X	48207144	48207144	+	Intron	SNP	G	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAU1	6780	broad.mit.edu	37	20	47770537	47770537	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK31	56164	broad.mit.edu	37	7	23750113	23750113	+	Intron	SNP	C	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STRAP	11171	broad.mit.edu	37	12	16047117	16047117	+	Intron	SNP	G	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SVEP1	79987	broad.mit.edu	37	9	113265485	113265485	+	Missense_Mutation	SNP	G	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNJ2BP	55333	broad.mit.edu	37	14	70855425	70855425	+	Intron	SNP	G	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT10	341359	broad.mit.edu	37	12	33529829	33529829	+	Missense_Mutation	SNP	C	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT13	57586	broad.mit.edu	37	11	45307669	45307669	+	Silent	SNP	A	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF1	6872	broad.mit.edu	37	X	70679627	70679627	+	Intron	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAGLN2	8407	broad.mit.edu	37	1	159888618	159888619	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAGLN3	29114	broad.mit.edu	37	3	111718394	111718394	+	Missense_Mutation	SNP	T	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TALDO1	6888	broad.mit.edu	37	11	763398	763398	+	Silent	SNP	C	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAS2R16	50833	broad.mit.edu	37	7	122635134	122635134	+	Silent	SNP	C	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D12	23232	broad.mit.edu	37	10	96291100	96291100	+	Missense_Mutation	SNP	G	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX15	6913	broad.mit.edu	37	1	119467339	119467339	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX3	6926	broad.mit.edu	37	12	115120699	115120699	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCEAL3	85012	broad.mit.edu	37	X	102864328	102864328	+	Silent	SNP	A	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCEAL5	340543	broad.mit.edu	37	X	102528926	102528926	+	Frame_Shift_Del	DEL	C	-	-			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEKT4	150483	broad.mit.edu	37	2	95539684	95539684	+	Intron	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFB2M	64216	broad.mit.edu	37	1	246714570	246714570	+	Missense_Mutation	SNP	T	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGFB1I1	7041	broad.mit.edu	37	16	31485367	31485378	+	Intron	DEL	AGAGGAATACAC	-	-			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THBS2	7058	broad.mit.edu	37	6	169641917	169641917	+	Silent	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THSD7A	221981	broad.mit.edu	37	7	11501720	11501720	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIAM1	7074	broad.mit.edu	37	21	32638630	32638630	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIGIT	201633	broad.mit.edu	37	3	114014579	114014579	+	Missense_Mutation	SNP	T	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TJAP1	93643	broad.mit.edu	37	6	43471199	43471199	+	Missense_Mutation	SNP	A	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLN1	7094	broad.mit.edu	37	9	35710595	35710595	+	Missense_Mutation	SNP	G	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLN2	83660	broad.mit.edu	37	15	63084805	63084805	+	Intron	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLR8	51311	broad.mit.edu	37	X	12924813	12924813	+	5'UTR	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMCO3	55002	broad.mit.edu	37	13	114150360	114150360	+	Intron	SNP	A	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM135	65084	broad.mit.edu	37	11	87025448	87025448	+	Intron	SNP	C	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM195	392636	broad.mit.edu	37	7	15584551	15584551	+	Intron	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM195	392636	broad.mit.edu	37	7	15599801	15599801	+	Silent	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMSB15B	286527	broad.mit.edu	37	X	103220240	103220240	+	3'UTR	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNNI2	7136	broad.mit.edu	37	11	1860895	1860895	+	5'Flank	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNNT3	7140	broad.mit.edu	37	11	1957425	1957425	+	Intron	SNP	A	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNR	7143	broad.mit.edu	37	1	175336417	175336417	+	Silent	SNP	A	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPH1	7166	broad.mit.edu	37	11	18044391	18044391	+	Missense_Mutation	SNP	C	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE	7179	broad.mit.edu	37	21	10935066	10935066	+	Intron	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAF7	84231	broad.mit.edu	37	16	2204953	2204953	+	5'Flank	SNP	A	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAPPC6B	122553	broad.mit.edu	37	14	39620949	39620949	+	Splice_Site	DEL	C	-	-			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM28	10155	broad.mit.edu	37	19	59060467	59060467	+	Missense_Mutation	SNP	G	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM47	91107	broad.mit.edu	37	17	73870695	73870695	+	Missense_Mutation	SNP	G	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIP12	9320	broad.mit.edu	37	2	230663493	230663494	+	Intron	DNP	CT	AA	AA			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSIX	9383	broad.mit.edu	37	X	73041658	73041658	+	RNA	SNP	C	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC16	158248	broad.mit.edu	37	9	130479235	130479235	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179395969	179395969	+	Missense_Mutation	SNP	T	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179575399	179575399	+	Silent	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179614294	179614294	+	Missense_Mutation	SNP	T	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBB4	10382	broad.mit.edu	37	19	6496231	6496231	+	Silent	SNP	G	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBD1	51174	broad.mit.edu	37	17	57968330	57968330	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBAP2	55833	broad.mit.edu	37	9	33943708	33943708	+	Intron	SNP	G	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR1	197131	broad.mit.edu	37	15	43351803	43351803	+	Intron	DEL	G	-	-	rs67616044		TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC13A	23025	broad.mit.edu	37	19	17735612	17735612	+	Intron	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC13D	201294	broad.mit.edu	37	17	73832735	73832735	+	Missense_Mutation	SNP	C	T	T	rs149099554		TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP6	9098	broad.mit.edu	37	17	5042392	5042392	+	Intron	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	120692157	120692157	+	IGR	SNP	G	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	131930306	131930306	+	IGR	SNP	C	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	42644740	42644740	+	IGR	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	42746422	42746422	+	IGR	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	70783290	70783290	+	IGR	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55482370	55482370	+	IGR	SNP	C	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55647081	55647081	+	IGR	SNP	T	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	129501339	129501339	+	IGR	SNP	C	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	32225763	32225763	+	IGR	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	34318510	34318510	+	IGR	SNP	C	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	19744846	19744846	+	IGR	SNP	C	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	65532124	65532124	+	IGR	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	89533447	89533447	+	IGR	SNP	A	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32178119	32178119	+	IGR	SNP	T	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33402046	33402046	+	IGR	SNP	G	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33527947	33527948	+	IGR	DNP	GA	TT	TT			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	18400879	18400879	+	IGR	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	60361589	60361589	+	IGR	SNP	C	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	61549105	61549105	+	IGR	SNP	G	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	14631328	14631328	+	IGR	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	21469575	21469575	+	IGR	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	104470097	104470097	+	IGR	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	11692101	11692101	+	IGR	SNP	A	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	143361975	143361975	+	IGR	SNP	A	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149340864	149340864	+	IGR	SNP	T	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	164325959	164325959	+	IGR	SNP	C	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	247400543	247400543	+	IGR	SNP	G	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	248286173	248286173	+	IGR	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	248617083	248617083	+	IGR	SNP	C	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	248789473	248789473	+	IGR	SNP	G	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	53175069	53175069	+	IGR	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	14757401	14757401	+	IGR	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	14898340	14898340	+	IGR	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	109328813	109328813	+	IGR	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	130750966	130750966	+	IGR	SNP	G	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	175366766	175366766	+	IGR	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	34065210	34065210	+	IGR	SNP	A	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90458791	90458791	+	IGR	SNP	G	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91873053	91873053	+	IGR	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91893838	91893838	+	IGR	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	74185456	74185456	+	IGR	SNP	T	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	87101025	87101025	+	IGR	SNP	C	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	98030766	98030766	+	IGR	SNP	G	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	27162402	27162402	+	IGR	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	45416772	45416772	+	IGR	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	49507813	49507813	+	IGR	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	110319466	110319466	+	IGR	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	117114616	117114616	+	IGR	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	75375029	75375029	+	IGR	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	76878192	76878192	+	IGR	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	82272408	82272408	+	IGR	SNP	T	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	92225702	92225702	+	IGR	SNP	G	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	104465956	104465956	+	IGR	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	12319793	12319793	+	IGR	SNP	G	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	143664455	143664455	+	IGR	SNP	C	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	154871265	154871265	+	IGR	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	27705041	27705041	+	IGR	SNP	G	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	80774629	80774629	+	IGR	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	56244026	56244026	+	IGR	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63353552	63353552	+	IGR	SNP	C	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63392022	63392022	+	IGR	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	47610226	47610226	+	IGR	SNP	C	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	37477152	37477152	+	IGR	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	146280490	146280490	+	IGR	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	40750568	40750568	+	IGR	SNP	C	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	55661290	55661290	+	IGR	SNP	A	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	64770878	64770878	+	IGR	SNP	A	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	65296088	65296088	+	IGR	SNP	G	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	87351382	87351382	+	IGR	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VGLL1	51442	broad.mit.edu	37	X	135630900	135630900	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13D	55187	broad.mit.edu	37	1	12422567	12422567	+	Intron	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS41	27072	broad.mit.edu	37	7	38767996	38767996	+	Intron	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VTA1	51534	broad.mit.edu	37	6	142468431	142468431	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WHSC1	7468	broad.mit.edu	37	4	1976104	1976104	+	Intron	SNP	A	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WIPF1	7456	broad.mit.edu	37	2	175431778	175431778	+	Intron	SNP	A	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNT10B	7480	broad.mit.edu	37	12	49362049	49362049	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WSCD2	9671	broad.mit.edu	37	12	108618489	108618489	+	Intron	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WWC3	55841	broad.mit.edu	37	X	10106982	10106982	+	Intron	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XKR7	343702	broad.mit.edu	37	20	30584719	30584719	+	Missense_Mutation	SNP	G	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YSK4	80122	broad.mit.edu	37	2	135745193	135745193	+	Missense_Mutation	SNP	A	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZCCHC8	55596	broad.mit.edu	37	12	122958283	122958283	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX4	79776	broad.mit.edu	37	8	77617093	77617093	+	Missense_Mutation	SNP	C	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFP112	7771	broad.mit.edu	37	19	44832283	44832283	+	Missense_Mutation	SNP	G	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZIC4	84107	broad.mit.edu	37	3	147113580	147113580	+	Intron	SNP	G	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF141	7700	broad.mit.edu	37	4	337651	337651	+	Silent	SNP	G	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF225	7768	broad.mit.edu	37	19	44634920	44634920	+	Intron	SNP	A	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF238	10472	broad.mit.edu	37	1	244217323	244217323	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF248	57209	broad.mit.edu	37	10	38120629	38120629	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF419	79744	broad.mit.edu	37	19	58005275	58005275	+	Missense_Mutation	SNP	T	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF615	284370	broad.mit.edu	37	19	52497466	52497466	+	Missense_Mutation	SNP	T	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF737	100129842	broad.mit.edu	37	19	20728561	20728561	+	Missense_Mutation	SNP	A	C	C			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF804A	91752	broad.mit.edu	37	2	185798422	185798422	+	Silent	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF804A	91752	broad.mit.edu	37	2	185800661	185800661	+	Missense_Mutation	SNP	G	T	T	rs111510601	byFrequency	TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF98	148198	broad.mit.edu	37	19	22605017	22605017	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	134624088	134624088	+	Intron	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	80750336	80750336	+	Intron	SNP	C	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22322807	22322807	+	Intron	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	29096541	29096541	+	Intron	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	142720958	142720958	+	Intron	SNP	A	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	148891855	148891855	+	Intron	SNP	C	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	173331733	173331734	+	Intron	DNP	CC	AG	AG			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89292102	89292102	+	RNA	SNP	C	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89319709	89319709	+	Intron	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	144833090	144833090	+	5'Flank	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	17354055	17354055	+	RNA	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	136849107	136849107	+	5'Flank	SNP	C	A	A			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	73150328	73150328	+	Missense_Mutation	SNP	A	G	G			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	90748022	90748022	+	Intron	SNP	G	T	T			TCGA-73-4662-01A-01D-1265-08	TCGA-73-4662-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
