Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	dataset	type	classification	start	end	gene	chr	ref_allele	tum_allele1	tum_allele2	context
OR4F5	79501	genome.wustl.edu	36	1	59625	59625	+	Missense_Mutation	SNP	T	T	G	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	59625	59625	OR4F5	1	T	T	G	49
SLC6A3	6531	genome.wustl.edu	36	5	1462901	1462901	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	1462901	1462901	SLC6A3	5	G	G	C	39
SEPX1	51734	genome.wustl.edu	36	16	1930805	1930805	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	1930805	1930805	SEPX1	16	G	G	T	46
MYOM1	8736	genome.wustl.edu	36	18	3069264	3069264	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	3069264	3069264	MYOM1	18	G	G	C	42
CELF5	60680	genome.wustl.edu	36	19	3233187	3233187	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	3233187	3233187	CELF5	19	T	T	C	56
DFFB	1677	genome.wustl.edu	36	1	3772119	3772119	+	Silent	SNP	T	T	C	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	3772119	3772119	DFFB	1	T	T	C	55
LRG1	116844	genome.wustl.edu	36	19	4489173	4489173	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	4489173	4489173	LRG1	19	C	C	T	19
SEC14L5	9717	genome.wustl.edu	36	16	4995935	4995935	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	4995935	4995935	SEC14L5	16	A	A	G	11
GRM7	2917	genome.wustl.edu	36	3	6878441	6878441	+	Missense_Mutation	SNP	C	A	A	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	C	C	A	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	6878441	6878441	GRM7	3	C	A	A	31
ATN1	1822	genome.wustl.edu	36	12	6918599	6918599	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	6918599	6918599	ATN1	12	C	C	T	25
CAGE1	285782	genome.wustl.edu	36	6	7318748	7318748	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	7318748	7318748	CAGE1	6	C	C	A	17
PNPLA6	10908	genome.wustl.edu	36	19	7525516	7525516	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	7525516	7525516	PNPLA6	19	C	C	T	19
PFAS	5198	genome.wustl.edu	36	17	8099559	8099559	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	8099559	8099559	PFAS	17	G	G	A	40
MYH8	4626	genome.wustl.edu	36	17	10244527	10244527	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	10244527	10244527	MYH8	17	G	G	T	46
LOC642451	642451	genome.wustl.edu	36	16	11028662	11028662	+	Missense_Mutation	SNP	A	A	C	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	11028662	11028662	LOC642451	16	A	A	C	9
HERV-FRD	405754	genome.wustl.edu	36	6	11213309	11213309	+	Missense_Mutation	SNP	A	A	C	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	A	A	A	C	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	11213309	11213309	HERV-FRD	6	A	A	C	4
ZNF833	401898	genome.wustl.edu	36	19	11657542	11657542	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	11657542	11657542	ZNF833	19	T	T	A	58
NPPB	4879	genome.wustl.edu	36	1	11841068	11841068	+	Nonsense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Nonsense_Mutation	SNP	11841068	11841068	NPPB	1	C	C	A	30
CIDEA	1149	genome.wustl.edu	36	18	12264107	12264107	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	12264107	12264107	CIDEA	18	C	C	A	22
DAND5	199699	genome.wustl.edu	36	19	12941509	12941509	+	Missense_Mutation	SNP	T	T	G	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	12941509	12941509	DAND5	19	T	T	G	55
MC5R	4161	genome.wustl.edu	36	18	13816421	13816421	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	13816421	13816421	MC5R	18	C	C	T	31
LOC90379	90379	genome.wustl.edu	36	19	13931608	13931608	+	Silent	SNP	A	A	G	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	13931608	13931608	LOC90379	19	A	A	G	6
OR10H4	126541	genome.wustl.edu	36	19	15921303	15921303	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	15921303	15921303	OR10H4	19	G	G	A	37
NSUN6	221078	genome.wustl.edu	36	10	18980066	18980066	+	Nonsense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Nonsense_Mutation	SNP	18980066	18980066	NSUN6	10	C	C	A	30
NCAN	1463	genome.wustl.edu	36	19	19196156	19196156	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	19196156	19196156	NCAN	19	G	G	A	40
NPC1	4864	genome.wustl.edu	36	18	19372552	19372552	+	Missense_Mutation	SNP	A	A	C	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	19372552	19372552	NPC1	18	A	A	C	9
EFHB	151651	genome.wustl.edu	36	3	19950031	19950031	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	19950031	19950031	EFHB	3	C	C	T	25
DNAH3	55567	genome.wustl.edu	36	16	21000511	21000511	+	Missense_Mutation	SNP	T	T	G	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	21000511	21000511	DNAH3	16	T	T	G	64
LOC100131998	0	genome.wustl.edu	36	16	22348687	22348687	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	22348687	22348687	LOC100131998	16	C	C	T	30
ARID1A	8289	genome.wustl.edu	36	1	26960004	26960004	+	Nonsense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Nonsense_Mutation	SNP	26960004	26960004	ARID1A	1	C	C	G	29
STK38L	23012	genome.wustl.edu	36	12	27353314	27353314	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	27353314	27353314	STK38L	12	G	G	C	44
RHOT1	55288	genome.wustl.edu	36	17	27527332	27527332	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	27527332	27527332	RHOT1	17	G	G	C	33
CDK5R1	8851	genome.wustl.edu	36	17	27839273	27839273	+	Silent	SNP	C	T	T	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	27839273	27839273	CDK5R1	17	C	T	T	23
C8orf80	389643	genome.wustl.edu	36	8	27943808	27943808	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	27943808	27943808	C8orf80	8	T	T	A	56
MTUS2	23281	genome.wustl.edu	36	13	28796764	28796764	+	Missense_Mutation	SNP	G	A	A	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	G	G	A	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	28796764	28796764	MTUS2	13	G	A	A	46
WRN	7486	genome.wustl.edu	36	8	31068951	31068951	+	Missense_Mutation	SNP	T	T	G	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	T	T	T	G	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	31068951	31068951	WRN	8	T	T	G	61
DMD	1756	genome.wustl.edu	36	X	32290831	32290831	+	Nonsense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Nonsense_Mutation	SNP	32290831	32290831	DMD	23	C	C	A	21
DDX52	11056	genome.wustl.edu	36	17	33064181	33064181	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	33064181	33064181	DDX52	17	C	C	A	25
FNDC5	252995	genome.wustl.edu	36	1	33106019	33106019	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	33106019	33106019	FNDC5	1	T	T	A	51
RBL1	5933	genome.wustl.edu	36	20	35094482	35094482	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	35094482	35094482	RBL1	20	C	C	G	24
PDXP	57026	genome.wustl.edu	36	22	36391593	36391593	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	36391593	36391593	PDXP	22	G	G	C	36
CCDC123	84902	genome.wustl.edu	36	19	38114236	38114236	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	38114236	38114236	CCDC123	19	T	T	A	51
BUB1B	701	genome.wustl.edu	36	15	38292066	38292066	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	38292066	38292066	BUB1B	15	T	T	A	50
SCN10A	6336	genome.wustl.edu	36	3	38714850	38714850	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	38714850	38714850	SCN10A	3	G	G	A	33
CCR8	1237	genome.wustl.edu	36	3	39349522	39349522	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	39349522	39349522	CCR8	3	C	C	G	17
BRWD1	54014	genome.wustl.edu	36	21	39568229	39568229	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	39568229	39568229	BRWD1	21	C	C	A	30
EHD4	30844	genome.wustl.edu	36	15	40033268	40033268	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	40033268	40033268	EHD4	15	G	G	A	40
PHOX2B	8929	genome.wustl.edu	36	4	41445365	41445365	+	Missense_Mutation	SNP	G	T	T	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	G	G	T	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	41445365	41445365	PHOX2B	4	G	T	T	33
HECW1	23072	genome.wustl.edu	36	7	43499238	43499238	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	43499238	43499238	HECW1	7	G	G	A	38
NPC1L1	29881	genome.wustl.edu	36	7	44522980	44522980	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	44522980	44522980	NPC1L1	7	G	G	A	47
ZNF197	10168	genome.wustl.edu	36	3	44645733	44645733	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	44645733	44645733	ZNF197	3	C	C	A	18
SHKBP1	92799	genome.wustl.edu	36	19	45781214	45781214	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	45781214	45781214	SHKBP1	19	G	G	C	42
MAST2	23139	genome.wustl.edu	36	1	46274325	46274325	+	Nonstop_Mutation	SNP	G	G	C	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Nonstop_Mutation	SNP	46274325	46274325	MAST2	1	G	G	C	34
LRRC2	79442	genome.wustl.edu	36	3	46538078	46538078	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	46538078	46538078	LRRC2	3	C	C	T	23
PSMC3	5702	genome.wustl.edu	36	11	47401073	47401073	+	Missense_Mutation	SNP	T	T	G	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	T	T	T	G	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	47401073	47401073	PSMC3	11	T	T	G	62
DHX30	22907	genome.wustl.edu	36	3	47863811	47863811	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	47863811	47863811	DHX30	3	G	G	A	47
OR4C46	119749	genome.wustl.edu	36	11	51372438	51372438	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	51372438	51372438	OR4C46	11	A	A	T	9
PKHD1	5314	genome.wustl.edu	36	6	52025839	52025839	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	52025839	52025839	PKHD1	6	C	C	G	19
HNRNPA1	3178	genome.wustl.edu	36	12	52961503	52961503	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	52961503	52961503	HNRNPA1	12	G	G	A	45
NCKAP1L	3071	genome.wustl.edu	36	12	53216270	53216270	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	53216270	53216270	NCKAP1L	12	C	C	G	32
CACNA1D	776	genome.wustl.edu	36	3	53733046	53733046	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	53733046	53733046	CACNA1D	3	G	G	A	34
USP24	23358	genome.wustl.edu	36	1	55316852	55316852	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	55316852	55316852	USP24	1	A	A	G	14
OR5D16	390144	genome.wustl.edu	36	11	55362906	55362906	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	55362906	55362906	OR5D16	11	G	G	C	42
NLRC5	84166	genome.wustl.edu	36	16	55646900	55646900	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	55646900	55646900	NLRC5	16	G	G	A	46
COL21A1	81578	genome.wustl.edu	36	6	56152449	56152449	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	56152449	56152449	COL21A1	6	C	C	T	32
ZNF610	162963	genome.wustl.edu	36	19	57548776	57548776	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	57548776	57548776	ZNF610	19	C	C	T	31
LILRB4	11006	genome.wustl.edu	36	19	59867610	59867610	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	59867610	59867610	LILRB4	19	G	G	A	34
SS18L1	26039	genome.wustl.edu	36	20	60173926	60173926	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	60173926	60173926	SS18L1	20	C	C	T	23
PGA3	643834	genome.wustl.edu	36	11	60728299	60728299	+	Silent	SNP	C	C	A	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	60728299	60728299	PGA3	11	C	C	A	22
CDH19	28513	genome.wustl.edu	36	18	62329838	62329838	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	62329838	62329838	CDH19	18	T	T	A	52
THOC7	80145	genome.wustl.edu	36	3	63795871	63795871	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	63795871	63795871	THOC7	3	T	T	A	64
DIS3L	115752	genome.wustl.edu	36	15	64405758	64405758	+	Splice_Site_SNP	SNP	T	T	G	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Splice_Site_SNP	SNP	64405758	64405758	DIS3L	15	T	T	G	57
GPX2	2877	genome.wustl.edu	36	14	64476019	64476019	+	Silent	SNP	G	G	C	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	64476019	64476019	GPX2	14	G	G	C	46
LOC100132437		genome.wustl.edu	36	9	68357723	68357723	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	68357723	68357723	LOC100132437	9	A	A	G	12
DCAF5	8816	genome.wustl.edu	36	14	68591701	68591701	+	Silent	SNP	G	G	T	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	68591701	68591701	DCAF5	14	G	G	T	43
MED12	9968	genome.wustl.edu	36	X	70269528	70269528	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	70269528	70269528	MED12	23	C	C	G	18
LRRC7	57554	genome.wustl.edu	36	1	70291391	70291391	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	70291391	70291391	LRRC7	1	T	T	A	57
PMFBP1	83449	genome.wustl.edu	36	16	70731875	70731875	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	70731875	70731875	PMFBP1	16	C	C	T	24
DHCR7	1717	genome.wustl.edu	36	11	70830965	70830965	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	70830965	70830965	DHCR7	11	G	G	A	36
FOLR1	2348	genome.wustl.edu	36	11	71584666	71584666	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	71584666	71584666	FOLR1	11	G	G	A	45
ZNF236	7776	genome.wustl.edu	36	18	72709644	72709644	+	Nonsense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Nonsense_Mutation	SNP	72709644	72709644	ZNF236	18	G	G	T	45
KCNQ5	56479	genome.wustl.edu	36	6	73877773	73877773	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	73877773	73877773	KCNQ5	6	G	G	C	46
MTO1	25821	genome.wustl.edu	36	6	74240007	74240007	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	74240007	74240007	MTO1	6	A	A	G	1
COL12A1	1303	genome.wustl.edu	36	6	75900411	75900411	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	75900411	75900411	COL12A1	6	G	G	C	44
FRAS1	80144	genome.wustl.edu	36	4	79514397	79514397	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	79514397	79514397	FRAS1	4	A	A	T	14
BTBD1	53339	genome.wustl.edu	36	15	81516183	81516183	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	81516183	81516183	BTBD1	15	G	G	C	48
PDE8A	5151	genome.wustl.edu	36	15	83411368	83411368	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	Sanger_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	83411368	83411368	PDE8A	15	G	G	A	47
SNAP91	9892	genome.wustl.edu	36	6	84327316	84327316	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	84327316	84327316	SNAP91	6	C	C	A	28
CEP290	80184	genome.wustl.edu	36	12	86978787	86978787	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	86978787	86978787	CEP290	12	A	A	G	5
LDB3	11155	genome.wustl.edu	36	10	88441666	88441666	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	88441666	88441666	LDB3	10	C	C	T	27
MAN2A2	4122	genome.wustl.edu	36	15	89251066	89251066	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	89251066	89251066	MAN2A2	15	C	C	G	28
IGKV1-5		genome.wustl.edu	36	2	89302534	89302534	+	Silent	SNP	G	G	T	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	89302534	89302534	IGKV1-5	2	G	G	T	47
PTEN	5728	genome.wustl.edu	36	10	89701885	89701885	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	89701885	89701885	PTEN	10	G	G	T	48
KRIT1	889	genome.wustl.edu	36	7	91681222	91681222	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	91681222	91681222	KRIT1	7	T	T	C	64
LOC119358	119358	genome.wustl.edu	36	10	91728509	91728509	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	91728509	91728509	LOC119358	10	G	G	A	37
TGFBR3	7049	genome.wustl.edu	36	1	91936263	91936263	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	91936263	91936263	TGFBR3	1	C	C	G	28
CYP2C9	1559	genome.wustl.edu	36	10	96721970	96721970	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	96721970	96721970	CYP2C9	10	G	G	A	46
EPHA6	285220	genome.wustl.edu	36	3	98188911	98188911	+	Silent	SNP	A	A	G	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	98188911	98188911	EPHA6	3	A	A	G	8
SLIT1	6585	genome.wustl.edu	36	10	98814622	98814622	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	98814622	98814622	SLIT1	10	G	G	C	48
BHLHB9	80823	genome.wustl.edu	36	X	101891283	101891283	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	101891283	101891283	BHLHB9	23	C	C	G	30
MMP8	4317	genome.wustl.edu	36	11	102092270	102092270	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	102092270	102092270	MMP8	11	C	C	A	19
ZNF189	7743	genome.wustl.edu	36	9	103210792	103210792	+	Silent	SNP	A	A	G	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	103210792	103210792	ZNF189	9	A	A	G	1
NFKB1	4790	genome.wustl.edu	36	4	103678093	103678093	+	Silent	SNP	A	A	G	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	103678093	103678093	NFKB1	4	A	A	G	14
TAF5	6877	genome.wustl.edu	36	10	105132993	105132993	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	105132993	105132993	TAF5	10	C	C	G	32
PREP	5550	genome.wustl.edu	36	6	105878338	105878338	+	Splice_Site_SNP	SNP	T	T	G	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	T	T	T	G	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Splice_Site_SNP	SNP	105878338	105878338	PREP	6	T	T	G	53
FRMPD3	84443	genome.wustl.edu	36	X	106656544	106656544	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	106656544	106656544	FRMPD3	23	G	G	A	40
COL4A5	1287	genome.wustl.edu	36	X	107826227	107826227	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	107826227	107826227	COL4A5	23	G	G	A	37
ACACB	32	genome.wustl.edu	36	12	108138838	108138838	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	108138838	108138838	ACACB	12	C	C	G	17
C1orf103	55791	genome.wustl.edu	36	1	111292268	111292268	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	111292268	111292268	C1orf103	1	G	G	C	48
PALM2	114299	genome.wustl.edu	36	9	111745233	111745233	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	111745233	111745233	PALM2	9	A	A	G	16
SLC9A10	285335	genome.wustl.edu	36	3	113471528	113471528	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	113471528	113471528	SLC9A10	3	T	T	A	50
CCDC80	151887	genome.wustl.edu	36	3	113831719	113831719	+	Missense_Mutation	SNP	T	T	G	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	T	T	T	G	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	113831719	113831719	CCDC80	3	T	T	G	62
LVRN	206338	genome.wustl.edu	36	5	115326342	115326342	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	115326342	115326342	LVRN	5	C	C	T	30
MARCO	8685	genome.wustl.edu	36	2	119445573	119445573	+	Silent	SNP	C	C	G	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	119445573	119445573	MARCO	2	C	C	G	27
MAL2	114569	genome.wustl.edu	36	8	120321660	120321660	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	120321660	120321660	MAL2	8	G	G	C	46
KTELC1	56983	genome.wustl.edu	36	3	120688369	120688369	+	Splice_Site_SNP	SNP	G	G	C	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Splice_Site_SNP	SNP	120688369	120688369	KTELC1	3	G	G	C	35
C6orf170	221322	genome.wustl.edu	36	6	121443618	121443618	+	Nonstop_Mutation	SNP	A	A	T	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Nonstop_Mutation	SNP	121443618	121443618	C6orf170	6	A	A	T	16
KNTC1	9735	genome.wustl.edu	36	12	121618772	121618772	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	121618772	121618772	KNTC1	12	G	G	T	47
BRI3BP	140707	genome.wustl.edu	36	12	124063063	124063063	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	124063063	124063063	BRI3BP	12	C	C	A	28
GAPVD1	26130	genome.wustl.edu	36	9	127123549	127123549	+	Missense_Mutation	SNP	T	T	G	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	T	T	T	G	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	127123549	127123549	GAPVD1	9	T	T	G	56
TSGA13	114960	genome.wustl.edu	36	7	130019032	130019032	+	Silent	SNP	T	T	G	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	T	T	T	G	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	130019032	130019032	TSGA13	7	T	T	G	63
RALGDS	5900	genome.wustl.edu	36	9	134975699	134975699	+	Splice_Site_SNP	SNP	T	C	C	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	T	T	C	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Splice_Site_SNP	SNP	134975699	134975699	RALGDS	9	T	C	C	55
KY	339855	genome.wustl.edu	36	3	135805662	135805662	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	135805662	135805662	KY	3	G	G	A	38
EGR1	1958	genome.wustl.edu	36	5	137830996	137830996	+	Missense_Mutation	SNP	G	A	A	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	G	G	A	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	137830996	137830996	EGR1	5	G	A	A	38
LRP1B	53353	genome.wustl.edu	36	2	140797959	140797960	+	Missense	DNP	TC	TC	CT	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	TC	TC	TC	CT	TC	TC	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense	DNP	140797959	140797960	LRP1B	2	TC	TC	CT	50
LOC441294	441294	genome.wustl.edu	36	7	142980478	142980478	+	Missense_Mutation	SNP	A	A	C	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	A	A	A	C	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	142980478	142980478	LOC441294	7	A	A	C	1
PLEC	5339	genome.wustl.edu	36	8	145066072	145066072	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	145066072	145066072	PLEC	8	C	C	A	24
OTUD4	54726	genome.wustl.edu	36	4	146278262	146278262	+	Missense_Mutation	SNP	A	A	C	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	A	A	A	C	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	146278262	146278262	OTUD4	4	A	A	C	12
FCGR1A	2209	genome.wustl.edu	36	1	148028407	148028407	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	148028407	148028407	FCGR1A	1	T	T	C	49
MTMR11	10903	genome.wustl.edu	36	1	148174218	148174218	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	148174218	148174218	MTMR11	1	C	C	G	28
GIMAP6	474344	genome.wustl.edu	36	7	149955985	149955985	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	149955985	149955985	GIMAP6	7	G	G	T	36
FAM50A	9130	genome.wustl.edu	36	X	153328092	153328092	+	Missense_Mutation	SNP	G	A	A	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	G	G	A	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	153328092	153328092	FAM50A	23	G	A	A	47
GON4L	54856	genome.wustl.edu	36	1	153993466	153993466	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	153993466	153993466	GON4L	1	C	C	T	25
NAF1	92345	genome.wustl.edu	36	4	164269865	164269865	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	164269865	164269865	NAF1	4	G	G	C	45
IRF2	3660	genome.wustl.edu	36	4	185577632	185577632	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	185577632	185577632	IRF2	4	A	A	G	7
FAT1	2195	genome.wustl.edu	36	4	187747329	187747329	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	187747329	187747329	FAT1	4	G	G	T	35
COL6A3	1293	genome.wustl.edu	36	2	237939079	237939079	+	Splice_Site_SNP	SNP	C	A	A	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	C	C	A	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Splice_Site_SNP	SNP	237939079	237939079	COL6A3	2	C	A	A	18
ZNF518B	85460	genome.wustl.edu	36	4	10053863	10053881	+	Frame_Shift_Del	DEL	GTTGCTTCTATCAAATGCC	GTTGCTTCTATCAAATGCC	-	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	GTTGCTTCTATCAAATGCC	GTTGCTTCTATCAAATGCC	GTTGCTTCTATCAAATGCC	-	GTTGCTTCTATCAAATGCC	GTTGCTTCTATCAAATGCC	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Frame_Shift_Del	DEL	10053863	10053881	ZNF518B	4	GTTGCTTCTATCAAATGCC	GTTGCTTCTATCAAATGCC	-	36
MGA	23269	genome.wustl.edu	36	15	39828708	39828709	+	Frame_Shift_Ins	INS	-	-	A	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	-	-					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Frame_Shift_Ins	INS	39828708	39828709	MGA	15	-	-	A	48
MAGEE2	139599	genome.wustl.edu	36	X	74920217	74920228	+	In_Frame_Del	DEL	AAGCTCATATTC	AAGCTCATATTC	-	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	AAGCTCATATTC	AAGCTCATATTC	AAGCTCATATTC	-	AAGCTCATATTC	AAGCTCATATTC	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	In_Frame_Del	DEL	74920217	74920228	MAGEE2	23	AAGCTCATATTC	AAGCTCATATTC	-	9
LZTS2	84445	genome.wustl.edu	36	10	102753671	102753673	+	In_Frame_Del	DEL	TCC	TCC	-	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	TCC	TCC	TCC	-	TCC	TCC	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	In_Frame_Del	DEL	102753671	102753673	LZTS2	10	TCC	TCC	-	58
SLC6A17	388662	genome.wustl.edu	36	1	110539769	110539780	+	In_Frame_Del	DEL	TTCGTCCAGCGC	TTCGTCCAGCGC	-	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	TTCGTCCAGCGC	TTCGTCCAGCGC	TTCGTCCAGCGC	-	TTCGTCCAGCGC	TTCGTCCAGCGC	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	In_Frame_Del	DEL	110539769	110539780	SLC6A17	1	TTCGTCCAGCGC	TTCGTCCAGCGC	-	60
RPF2	84154	genome.wustl.edu	36	6	111436015	111436023	+	In_Frame_Del	DEL	CTAAAAAGT	CTAAAAAGT	-	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	CTAAAAAGT	CTAAAAAGT	CTAAAAAGT	-	CTAAAAAGT	CTAAAAAGT	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	In_Frame_Del	DEL	111436015	111436023	RPF2	6	CTAAAAAGT	CTAAAAAGT	-	20
UBN2	254048	genome.wustl.edu	36	7	138596723	138596724	+	Frame_Shift_Del	DEL	CA	CA	-	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	CA	CA					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Frame_Shift_Del	DEL	138596723	138596724	UBN2	7	CA	CA	-	25
TP53	7157	genome.wustl.edu	36	17	7520032	7520032	+	Splice_Site_SNP	SNP	C	C	G	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	C	C	C	G	C	C	Verified	Valid	Somatic	Phase_III	PCR	454_PCR_WGA		dbGAP	ABI 3730xl	WashU	Splice_Site_SNP	SNP	7520032	7520032	TP53	17	C	C	G	20
C1orf92	149499	genome.wustl.edu	36	1	155164045	155164045	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	155164045	155164045	C1orf92	1	G	G	A	45
CALHM1	255022	genome.wustl.edu	36	10	105208155	105208155	+	Missense_Mutation	SNP	A	A	C		Unknown	TCGA-10-0930-01	TCGA-10-0930-11	A	A	A	C	A	A	Unknown	Valid	Somatic	PhaseIII	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	105208155	105208155	CALHM1	10	A	A	C	6
CREB3L1	90993	genome.wustl.edu	36	11	46294513	46294513	+	Splice_Site_SNP	SNP	G	G	T	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Splice_Site_SNP	SNP	46294513	46294513	CREB3L1	11	G	G	T	44
ENSG00000180909		genome.wustl.edu	36	11	6130098	6130098	+	Silent	SNP	G	A	A	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	G	G	A	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	6130098	6130098	ENSG00000180909	11	G	A	A	40
SLC22A11	55867	genome.wustl.edu	36	11	64080374	64080374	+	Silent	SNP	C	C	T		Unknown	TCGA-10-0930-01	TCGA-10-0930-11	C	C	C	T	C	C	Unknown	Valid	Somatic	PhaseIII	Capture		1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	64080374	64080374	SLC22A11	11	C	C	T	17
SH2B3	10019	genome.wustl.edu	36	12	110369574	110369574	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	110369574	110369574	SH2B3	12	C	C	G	30
PPFIA2	8499	genome.wustl.edu	36	12	80271202	80271202	+	Silent	SNP	T	T	A	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	80271202	80271202	PPFIA2	12	T	T	A	54
TPTE2	93492	genome.wustl.edu	36	13	18954660	18954660	+	Missense_Mutation	SNP	T	T	G	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	T	T	T	G	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	18954660	18954660	TPTE2	13	T	T	G	56
RFXAP	5994	genome.wustl.edu	36	13	36292092	36292092	+	Nonsense_Mutation	SNP	G	G	T		Unknown	TCGA-10-0930-01	TCGA-10-0930-11	G	G	G	T	G	G	Unknown	Valid	Somatic	PhaseIII	Capture		1	dbGAP	Illumina GAIIx	WashU	Nonsense_Mutation	SNP	36292092	36292092	RFXAP	13	G	G	T	37
CLEC14A	161198	genome.wustl.edu	36	14	37793534	37793534	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	37793534	37793534	CLEC14A	14	T	T	C	54
SALL1	6299	genome.wustl.edu	36	16	49731904	49731904	+	Missense_Mutation	SNP	G	G	T		Unknown	TCGA-10-0930-01	TCGA-10-0930-11	G	G	G	T	G	G	Unknown	Valid	Somatic	PhaseIII	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	49731904	49731904	SALL1	16	G	G	T	43
KIF18B	146909	genome.wustl.edu	36	17	40366915	40366915	+	Missense_Mutation	SNP	T	C	C	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	T	T	C	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	40366915	40366915	KIF18B	17	T	C	C	59
PLCD4	84812	genome.wustl.edu	36	2	219205133	219205133	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	219205133	219205133	PLCD4	2	A	A	G	9
MLPH	79083	genome.wustl.edu	36	2	238113861	238113861	+	Missense_Mutation	SNP	G	G	C		Unknown	TCGA-10-0930-01	TCGA-10-0930-11	G	G	G	C	G	G	Unknown	Valid	Somatic	PhaseIII	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	238113861	238113861	MLPH	2	G	G	C	35
PARP9	83666	genome.wustl.edu	36	3	123759921	123759921	+	Silent	SNP	G	G	T		Unknown	TCGA-10-0930-01	TCGA-10-0930-11	G	G	G	T	G	G	Unknown	Valid	Somatic	PhaseIII	Capture		1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	123759921	123759921	PARP9	3	G	G	T	33
MED12L	116931	genome.wustl.edu	36	3	152550663	152550663	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	152550663	152550663	MED12L	3	A	A	G	9
GFRA3	2676	genome.wustl.edu	36	5	137621427	137621427	+	Silent	SNP	G	G	C		Unknown	TCGA-10-0930-01	TCGA-10-0930-11	G	G	G	C	G	G	Unknown	Valid	Somatic	PhaseIII	Capture		1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	137621427	137621427	GFRA3	5	G	G	C	33
RUFY1	80230	genome.wustl.edu	36	5	178949231	178949231	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	178949231	178949231	RUFY1	5	G	G	C	33
RREB1	6239	genome.wustl.edu	36	6	7176750	7176750	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	7176750	7176750	RREB1	6	C	C	T	32
GNB2	2783	genome.wustl.edu	36	7	100113090	100113090	+	Missense_Mutation	SNP	A	A	G		Unknown	TCGA-10-0930-01	TCGA-10-0930-11	A	A	A	G	A	A	Unknown	Valid	Somatic	PhaseIII	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	100113090	100113090	GNB2	7	A	A	G	4
CBX3	11335	genome.wustl.edu	36	7	26209145	26209145	+	Missense_Mutation	SNP	T	T	G	novel	Unknown	TCGA-10-0930-01	TCGA-10-0930-11	T	T	T	G	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	26209145	26209145	CBX3	7	T	T	G	51
ALPK2	115701	genome.wustl.edu	36	18	54356376	54356376	+	Missense_Mutation	SNP	C	C	G		Unknown	TCGA-10-0930-01	TCGA-10-0930-11	C	C	C	G	C	C	Unknown	Valid	Somatic	PhaseIII	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	54356376	54356376	ALPK2	18	C	C	G	32
ANO8	57719	genome.wustl.edu	36	19	17299567	17299567	+	Silent	SNP	G	G	A		Unknown	TCGA-10-0930-01	TCGA-10-0930-11	G	G	G	A	G	G	Unknown	Valid	Somatic	PhaseIII	Capture		1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	17299567	17299567	ANO8	19	G	G	A	40
APCDD1L	164284	genome.wustl.edu	36	20	56479111	56479111	+	Missense_Mutation	SNP	T	T	C		Unknown	TCGA-10-0930-01	TCGA-10-0930-11	T	T	T	C	T	T	Unknown	Valid	Somatic	PhaseIII	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	56479111	56479111	APCDD1L	20	T	T	C	50
SGSM1	129049	genome.wustl.edu	36	22	23573735	23573735	+	Nonsense_Mutation	SNP	C	C	T		Unknown	TCGA-10-0930-01	TCGA-10-0930-11	C	C	C	T	C	C	Unknown	Valid	Somatic	PhaseIII	Capture		1	dbGAP	Illumina GAIIx	WashU	Nonsense_Mutation	SNP	23573735	23573735	SGSM1	22	C	C	T	25
