Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	dataset	type	classification	start	end	gene	chr	ref_allele	tum_allele1	tum_allele2	context
NADK	65220	broad.mit.edu	36	1	1675976	1675976	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	1675976	1675976	NADK	1	C	C	T	23
SLC45A1	50651	broad.mit.edu	36	1	8322189	8322189	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	8322189	8322189	SLC45A1	1	C	C	T	29
SNHG3-RCC1	1104	broad.mit.edu	36	1	28735875	28735875	+	Missense_Mutation	SNP	T	T	G	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	28735875	28735875	SNHG3-RCC1	1	T	T	G	57
GADD45A	1647	broad.mit.edu	36	1	67924773	67924773	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	67924773	67924773	GADD45A	1	A	A	G	11
FMO5	2330	broad.mit.edu	36	1	145139682	145139682	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	145139682	145139682	FMO5	1	C	C	T	29
BNIPL	149428	broad.mit.edu	36	1	149277646	149277646	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	149277646	149277646	BNIPL	1	C	C	A	18
FLG	2312	broad.mit.edu	36	1	150552420	150552420	+	Silent	SNP	T	T	G	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	150552420	150552420	FLG	1	T	T	G	63
BCAN	63827	broad.mit.edu	36	1	154895500	154895500	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	154895500	154895500	BCAN	1	C	C	A	19
CDH23	64072	broad.mit.edu	36	10	73134685	73134685	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	73134685	73134685	CDH23	10	C	C	T	31
SPOCK2	9806	broad.mit.edu	36	10	73496817	73496817	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	73496817	73496817	SPOCK2	10	G	G	A	47
LGI1	9211	broad.mit.edu	36	10	95542597	95542597	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	95542597	95542597	LGI1	10	C	C	G	21
SBF2	81846	broad.mit.edu	36	11	9834830	9834830	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	9834830	9834830	SBF2	11	T	T	A	50
NRXN2	9379	broad.mit.edu	36	11	64184952	64184952	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	64184952	64184952	NRXN2	11	C	C	T	22
CPT1A	1374	broad.mit.edu	36	11	68308909	68308909	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	68308909	68308909	CPT1A	11	C	C	T	23
GRAMD1B	57476	broad.mit.edu	36	11	122979344	122979344	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	122979344	122979344	GRAMD1B	11	C	C	T	26
R3HDM2	22864	broad.mit.edu	36	12	55934959	55934959	+	Missense_Mutation	SNP	A	A	C	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	55934959	55934959	R3HDM2	12	A	A	C	4
NT5DC3	51559	broad.mit.edu	36	12	102695829	102695829	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	102695829	102695829	NT5DC3	12	G	G	C	39
RCBTB2	1102	broad.mit.edu	36	13	47975029	47975029	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	47975029	47975029	RCBTB2	13	G	G	A	45
FBXO34	55030	broad.mit.edu	36	14	54887810	54887810	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	54887810	54887810	FBXO34	14	C	C	A	28
SPTB	6710	broad.mit.edu	36	14	64333106	64333106	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	64333106	64333106	SPTB	14	C	C	A	28
YLPM1	56252	broad.mit.edu	36	14	74335565	74335565	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	74335565	74335565	YLPM1	14	A	A	T	10
RCOR1	23186	broad.mit.edu	36	14	102237370	102237370	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	102237370	102237370	RCOR1	14	G	G	C	41
GCOM1	145781	broad.mit.edu	36	15	55713220	55713220	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	55713220	55713220	GCOM1	15	C	C	T	27
ISLR2	57611	broad.mit.edu	36	15	72213827	72213827	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	72213827	72213827	ISLR2	15	C	C	G	23
SYNM	23336	broad.mit.edu	36	15	97489608	97489608	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	97489608	97489608	SYNM	15	G	G	T	48
IFT140	9742	broad.mit.edu	36	16	1574422	1574422	+	Missense_Mutation	SNP	A	A	C	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	1574422	1574422	IFT140	16	A	A	C	6
ANKS4B	257629	broad.mit.edu	36	16	21169284	21169284	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	21169284	21169284	ANKS4B	16	C	C	G	22
HS3ST4	9951	broad.mit.edu	36	16	25611891	25611891	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	25611891	25611891	HS3ST4	16	C	C	G	23
TP53	7157	broad.mit.edu	36	17	7517866	7517866	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	7517866	7517866	TP53	17	C	C	A	30
RAI1	10743	broad.mit.edu	36	17	17641239	17641239	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	17641239	17641239	RAI1	17	C	C	G	20
VTN	7448	broad.mit.edu	36	17	23720126	23720126	+	Silent	SNP	G	G	C	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	23720126	23720126	VTN	17	G	G	C	43
IKZF3	22806	broad.mit.edu	36	17	35175608	35175608	+	Silent	SNP	A	A	G	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	35175608	35175608	IKZF3	17	A	A	G	11
STAT5A	6776	broad.mit.edu	36	17	37713174	37713174	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	37713174	37713174	STAT5A	17	G	G	A	37
ITGB4	3691	broad.mit.edu	36	17	71235413	71235413	+	Silent	SNP	T	T	C	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	71235413	71235413	ITGB4	17	T	T	C	52
QRICH2	84074	broad.mit.edu	36	17	71801356	71801357	+	Missense_Mutation	DNP	GG	GG	AA	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	DNP	71801356	71801357	QRICH2	17	GG	GG	AA	35
SPHK1	8877	broad.mit.edu	36	17	71894576	71894576	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	71894576	71894576	SPHK1	17	A	A	G	6
AFG3L2	10939	broad.mit.edu	36	18	12319615	12319615	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	12319615	12319615	AFG3L2	18	C	C	T	24
MYO5B	4645	broad.mit.edu	36	18	45675482	45675482	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	45675482	45675482	MYO5B	18	C	C	T	30
SERPINB3	6317	broad.mit.edu	36	18	59477628	59477628	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	59477628	59477628	SERPINB3	18	C	C	T	19
KCNN1	3780	broad.mit.edu	36	19	17953529	17953529	+	Silent	SNP	G	G	T	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	17953529	17953529	KCNN1	19	G	G	T	47
GSK3A	2931	broad.mit.edu	36	19	47426792	47426792	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	47426792	47426792	GSK3A	19	G	G	A	35
CEACAM1	634	broad.mit.edu	36	19	47718178	47718178	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	47718178	47718178	CEACAM1	19	G	G	A	35
PSG11	5680	broad.mit.edu	36	19	48214999	48214999	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	48214999	48214999	PSG11	19	G	G	C	43
CBLC	23624	broad.mit.edu	36	19	49976091	49976092	+	Missense_Mutation	DNP	TG	TG	GA	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	DNP	49976091	49976092	CBLC	19	TG	TG	GA	51
SLC27A5	10998	broad.mit.edu	36	19	63701781	63701781	+	Silent	SNP	C	C	A	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	63701781	63701781	SLC27A5	19	C	C	A	17
TMEM131	23505	broad.mit.edu	36	2	97775756	97775756	+	Missense_Mutation	SNP	A	A	C	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	97775756	97775756	TMEM131	2	A	A	C	10
MYO3B	140469	broad.mit.edu	36	2	170969051	170969051	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	170969051	170969051	MYO3B	2	G	G	C	41
PDXK	8566	broad.mit.edu	36	21	44000290	44000290	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	44000290	44000290	PDXK	21	C	C	G	22
MCM3AP	8888	broad.mit.edu	36	21	46501213	46501213	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	46501213	46501213	MCM3AP	21	C	C	T	32
CCT8L2	150160	broad.mit.edu	36	22	15452656	15452656	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	15452656	15452656	CCT8L2	22	G	G	C	33
ZNF280B	140883	broad.mit.edu	36	22	21172614	21172614	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	21172614	21172614	ZNF280B	22	C	C	T	28
GAS2L1	10634	broad.mit.edu	36	22	28037931	28037931	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	28037931	28037931	GAS2L1	22	C	C	G	21
NR1D2	9975	broad.mit.edu	36	3	23993837	23993837	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	23993837	23993837	NR1D2	3	C	C	A	28
MAGI1	9223	broad.mit.edu	36	3	65317511	65317511	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	65317511	65317511	MAGI1	3	T	T	A	54
MYH15	22989	broad.mit.edu	36	3	109600241	109600241	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	109600241	109600241	MYH15	3	C	C	T	19
ALDH1L1	10840	broad.mit.edu	36	3	127325902	127325902	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	127325902	127325902	ALDH1L1	3	C	C	T	30
PLCH1	23007	broad.mit.edu	36	3	156682854	156682854	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	156682854	156682854	PLCH1	3	A	A	G	5
SLITRK3	22865	broad.mit.edu	36	3	166388411	166388411	+	Nonsense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Nonsense_Mutation	SNP	166388411	166388411	SLITRK3	3	C	C	A	31
ETV5	2119	broad.mit.edu	36	3	187305975	187305975	+	Silent	SNP	T	T	A	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	187305975	187305975	ETV5	3	T	T	A	49
BOD1L	259282	broad.mit.edu	36	4	13213992	13213992	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	13213992	13213992	BOD1L	4	T	T	A	64
CD38	952	broad.mit.edu	36	4	15444986	15444986	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	15444986	15444986	CD38	4	A	A	T	2
BMP3	651	broad.mit.edu	36	4	82186163	82186163	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	82186163	82186163	BMP3	4	C	C	T	21
LARP7	51574	broad.mit.edu	36	4	113788063	113788063	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	113788063	113788063	LARP7	4	T	T	A	51
ANK2	287	broad.mit.edu	36	4	114381120	114381120	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	114381120	114381120	ANK2	4	C	C	T	17
ANK2	287	broad.mit.edu	36	4	114415178	114415178	+	Missense_Mutation	SNP	T	T	G	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	114415178	114415178	ANK2	4	T	T	G	50
TLL1	7092	broad.mit.edu	36	4	167144075	167144075	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	167144075	167144075	TLL1	4	G	G	T	48
RGNEF	64283	broad.mit.edu	36	5	73223696	73223696	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	73223696	73223696	RGNEF	5	A	A	G	11
ZNF608	57507	broad.mit.edu	36	5	124012715	124012715	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	124012715	124012715	ZNF608	5	A	A	T	10
FSTL4	23105	broad.mit.edu	36	5	132764353	132764353	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	132764353	132764353	FSTL4	5	G	G	A	47
CATSPER3	347732	broad.mit.edu	36	5	134333576	134333576	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	134333576	134333576	CATSPER3	5	C	C	G	26
PURA	5813	broad.mit.edu	36	5	139474425	139474425	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	139474425	139474425	PURA	5	C	C	T	32
PCDHA10	56139	broad.mit.edu	36	5	140217167	140217167	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	140217167	140217167	PCDHA10	5	C	C	G	19
CAMK2A	815	broad.mit.edu	36	5	149610024	149610024	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	149610024	149610024	CAMK2A	5	G	G	A	39
GABBR1	2550	broad.mit.edu	36	6	29697532	29697532	+	Silent	SNP	A	A	G	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	29697532	29697532	GABBR1	6	A	A	G	7
NOTCH4	4855	broad.mit.edu	36	6	32297029	32297029	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	32297029	32297029	NOTCH4	6	C	C	T	30
AARS2	57505	broad.mit.edu	36	6	44379046	44379046	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	44379046	44379046	AARS2	6	G	G	A	43
ROS1	6098	broad.mit.edu	36	6	117780972	117780972	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	117780972	117780972	ROS1	6	T	T	C	51
AKAP7	9465	broad.mit.edu	36	6	131532090	131532090	+	Silent	SNP	A	A	T	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	131532090	131532090	AKAP7	6	A	A	T	6
SHPRH	257218	broad.mit.edu	36	6	146297985	146297985	+	Missense_Mutation	SNP	A	A	C	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	146297985	146297985	SHPRH	6	A	A	C	16
SYNE1	23345	broad.mit.edu	36	6	152564686	152564686	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	152564686	152564686	SYNE1	6	T	T	C	51
SP4	6671	broad.mit.edu	36	7	21488152	21488152	+	Nonsense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Nonsense_Mutation	SNP	21488152	21488152	SP4	7	C	C	T	19
HOXA1	3198	broad.mit.edu	36	7	27101805	27101805	+	Silent	SNP	C	C	A	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	27101805	27101805	HOXA1	7	C	C	A	30
HECW1	23072	broad.mit.edu	36	7	43548047	43548047	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	43548047	43548047	HECW1	7	G	G	A	46
EPHB4	2050	broad.mit.edu	36	7	100259367	100259367	+	Silent	SNP	G	G	T	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	100259367	100259367	EPHB4	7	G	G	T	38
CADPS2	93664	broad.mit.edu	36	7	121843447	121843447	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	121843447	121843447	CADPS2	7	C	C	A	29
SPAM1	6677	broad.mit.edu	36	7	123381728	123381728	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	123381728	123381728	SPAM1	7	A	A	G	5
DOCK5	80005	broad.mit.edu	36	8	25157106	25157106	+	Splice_Site_SNP	SNP	G	G	A	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Splice_Site_SNP	SNP	25157106	25157106	DOCK5	8	G	G	A	34
TG	7038	broad.mit.edu	36	8	134004768	134004768	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	134004768	134004768	TG	8	T	T	C	58
PTAR1	375743	broad.mit.edu	36	9	71523211	71523211	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	71523211	71523211	PTAR1	9	G	G	C	40
OR13F1	138805	broad.mit.edu	36	9	106307154	106307154	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	106307154	106307154	OR13F1	9	G	G	A	38
COL27A1	85301	broad.mit.edu	36	9	116013085	116013085	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	116013085	116013085	COL27A1	9	C	C	T	26
DEC1	50514	broad.mit.edu	36	9	117203399	117203399	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	117203399	117203399	DEC1	9	C	C	A	25
OR1L8	138881	broad.mit.edu	36	9	124370150	124370150	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	124370150	124370150	OR1L8	9	A	A	G	10
ZNF79	7633	broad.mit.edu	36	9	129246967	129246967	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	129246967	129246967	ZNF79	9	C	C	T	17
C9orf78	51759	broad.mit.edu	36	9	131637305	131637305	+	Missense_Mutation	SNP	T	T	G	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	131637305	131637305	C9orf78	9	T	T	G	56
CAMSAP1	157922	broad.mit.edu	36	9	137853823	137853823	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	137853823	137853823	CAMSAP1	9	G	G	C	46
NOTCH1	4851	broad.mit.edu	36	9	138510902	138510902	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	138510902	138510902	NOTCH1	9	G	G	T	46
DPP7	29952	broad.mit.edu	36	9	139127677	139127677	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	139127677	139127677	DPP7	9	G	G	A	46
FAM47A	158724	broad.mit.edu	36	X	34059642	34059642	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	34059642	34059642	FAM47A	23	C	C	T	23
B3GNT7	93010	broad.mit.edu	36	2	231971623	231971624	+	In_Frame_Ins	INS	-	GCG	-	novel	Unknown	TCGA-61-2113-01	TCGA-61-2113-11							Unknown	Unknown	Unknown	Phase_I	Capture	---			Illumina GAIIx	Broad	In_Frame_Ins	INS	231971623	231971624	B3GNT7	2	-	GCG	-	55
