Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	Genome_Change	Annotation_Transcript	Transcript_Strand	Transcript_Exon	Transcript_Position	cDNA_Change	Codon_Change	Protein_Change	Other_Transcripts	Refseq_mRNA_Id	Refseq_prot_Id	SwissProt_acc_Id	SwissProt_entry_Id	Description	UniProt_AApos	UniProt_Region	UniProt_Site	UniProt_Natural_Variations	UniProt_Experimental_Info	GO_Biological_Process	GO_Cellular_Component	GO_Molecular_Function	COSMIC_overlapping_mutations	COSMIC_fusion_genes	COSMIC_tissue_types_affected	COSMIC_total_alterations_in_gene	Tumorscape_Amplification_Peaks	Tumorscape_Deletion_Peaks	TCGAscape_Amplification_Peaks	TCGAscape_Deletion_Peaks	DrugBank	ref_context	gc_content	CCLE_ONCOMAP_overlapping_mutations	CCLE_ONCOMAP_total_mutations_in_gene	CGC_Mutation_Type	CGC_Translocation_Partner	CGC_Tumor_Types_Somatic	CGC_Tumor_Types_Germline	CGC_Other_Diseases	DNARepairGenes_Role	FamilialCancerDatabase_Syndromes	MUTSIG_Published_Results	OREGANNO_ID	OREGANNO_Values	t_alt_count	t_ref_count	validation_status	validation_method	validation_tumor_sample	validation_alt_allele	filter
LOC728989	728989	broad.mit.edu	37	1	146494510	146494510	+	Silent	SNP	T	C	C	rs11585592	by1000genomes	TCGA-G9-6373-01A-11D-1786-08	TCGA-G9-6373-10A-01D-1786-08									Somatic	Phase_I	Capture				Illumina GAIIx	0caf5af2-ae80-4f39-ac6f-c2dbc2e8b820	906935a6-9e29-4146-a7a0-d60f2507e774	g.chr1:146494510T>C	uc001epd.2	-	4	563	c.489A>G	c.(487-489)GCA>GCG	p.A163A		NR_024442				SubName: Full=cDNA FLJ59595, highly similar to Homo sapiens phosphodiesterase 4D interacting protein, transcript variant 1, mRNA;												0						TGCCAGGCAGTGCAGGGATGT	0.557													3	22	---	---	---	---	PASS
LOC728989	728989	broad.mit.edu	37	1	146494511	146494511	+	Missense_Mutation	SNP	G	A	A	rs11587748	by1000genomes	TCGA-G9-6373-01A-11D-1786-08	TCGA-G9-6373-10A-01D-1786-08									Somatic	Phase_I	Capture				Illumina GAIIx	0caf5af2-ae80-4f39-ac6f-c2dbc2e8b820	906935a6-9e29-4146-a7a0-d60f2507e774	g.chr1:146494511G>A	uc001epd.2	-	4	562	c.488C>T	c.(487-489)GCA>GTA	p.A163V		NR_024442				SubName: Full=cDNA FLJ59595, highly similar to Homo sapiens phosphodiesterase 4D interacting protein, transcript variant 1, mRNA;												0						GCCAGGCAGTGCAGGGATGTG	0.557													3	24	---	---	---	---	PASS
LAMC1	3915	broad.mit.edu	37	1	183077436	183077436	+	Missense_Mutation	SNP	G	A	A			TCGA-G9-6373-01A-11D-1786-08	TCGA-G9-6373-10A-01D-1786-08									Somatic	Phase_I	Capture				Illumina GAIIx	0caf5af2-ae80-4f39-ac6f-c2dbc2e8b820	906935a6-9e29-4146-a7a0-d60f2507e774	g.chr1:183077436G>A	uc001gpy.3	+	3	1006	c.749G>A	c.(748-750)AGA>AAA	p.R250K		NM_002293	NP_002284	P11047	LAMC1_HUMAN	laminin, gamma 1 precursor	250	Laminin N-terminal.				axon guidance|cell migration|endoderm development|extracellular matrix disassembly|hemidesmosome assembly|positive regulation of epithelial cell proliferation|protein complex assembly|substrate adhesion-dependent cell spreading	extracellular space|laminin-1 complex|laminin-10 complex|laminin-11 complex	extracellular matrix structural constituent			ovary(3)|large_intestine(1)|kidney(1)	5					Alteplase(DB00009)|Anistreplase(DB00029)|Reteplase(DB00015)|Tenecteplase(DB00031)	ACTGACATCAGAGTAACTCTT	0.378													5	64	---	---	---	---	PASS
DSTYK	25778	broad.mit.edu	37	1	205126469	205126469	+	Missense_Mutation	SNP	C	T	T			TCGA-G9-6373-01A-11D-1786-08	TCGA-G9-6373-10A-01D-1786-08									Somatic	Phase_I	Capture				Illumina GAIIx	0caf5af2-ae80-4f39-ac6f-c2dbc2e8b820	906935a6-9e29-4146-a7a0-d60f2507e774	g.chr1:205126469C>T	uc001hbw.2	-	10	2348	c.2284G>A	c.(2284-2286)GTG>ATG	p.V762M	DSTYK_uc001hbx.2_Missense_Mutation_p.V762M	NM_015375	NP_056190	Q6XUX3	DUSTY_HUMAN	receptor interacting protein kinase 5 isoform 1	762	Protein kinase.					cytoplasm	ATP binding|protein binding|protein serine/threonine kinase activity|protein tyrosine kinase activity			lung(1)	1						ATTCCCTCCACCACATCTAGT	0.473													10	49	---	---	---	---	PASS
PLXNA2	5362	broad.mit.edu	37	1	208391254	208391254	+	Missense_Mutation	SNP	C	T	T	rs2782948	byFrequency	TCGA-G9-6373-01A-11D-1786-08	TCGA-G9-6373-10A-01D-1786-08									Somatic	Phase_I	Capture				Illumina GAIIx	0caf5af2-ae80-4f39-ac6f-c2dbc2e8b820	906935a6-9e29-4146-a7a0-d60f2507e774	g.chr1:208391254C>T	uc001hgz.2	-	2	772	c.14G>A	c.(13-15)CGG>CAG	p.R5Q	PLXNA2_uc001hha.3_Missense_Mutation_p.R59Q	NM_025179	NP_079455	O75051	PLXA2_HUMAN	plexin A2 precursor	5					axon guidance	integral to membrane|intracellular|plasma membrane				ovary(2)|central_nervous_system(1)	3				OV - Ovarian serous cystadenocarcinoma(81;0.199)		GGGCCAGGGCCGCCTCTGTTC	0.667													4	60	---	---	---	---	PASS
CRIM1	51232	broad.mit.edu	37	2	36691752	36691752	+	Silent	SNP	C	T	T			TCGA-G9-6373-01A-11D-1786-08	TCGA-G9-6373-10A-01D-1786-08									Somatic	Phase_I	Capture				Illumina GAIIx	0caf5af2-ae80-4f39-ac6f-c2dbc2e8b820	906935a6-9e29-4146-a7a0-d60f2507e774	g.chr2:36691752C>T	uc002rpd.2	+	5	984	c.945C>T	c.(943-945)GGC>GGT	p.G315G		NM_016441	NP_057525	Q9NZV1	CRIM1_HUMAN	cysteine-rich motor neuron 1 precursor	315	Extracellular (Potential).|Cell attachment site (Potential).				nervous system development|regulation of cell growth	extracellular region|integral to membrane|plasma membrane	insulin-like growth factor binding|insulin-like growth factor receptor activity|serine-type endopeptidase inhibitor activity			ovary(2)|skin(1)	3		all_hematologic(82;0.131)|Acute lymphoblastic leukemia(82;0.154)				TCTCTCGTGGCGATGGGACAC	0.502													36	142	---	---	---	---	PASS
EML4	27436	broad.mit.edu	37	2	42543187	42543187	+	Missense_Mutation	SNP	A	T	T			TCGA-G9-6373-01A-11D-1786-08	TCGA-G9-6373-10A-01D-1786-08									Somatic	Phase_I	Capture				Illumina GAIIx	0caf5af2-ae80-4f39-ac6f-c2dbc2e8b820	906935a6-9e29-4146-a7a0-d60f2507e774	g.chr2:42543187A>T	uc002rsi.2	+	18	2315	c.2053A>T	c.(2053-2055)ATA>TTA	p.I685L	EML4_uc010fap.2_Missense_Mutation_p.I627L|EML4_uc002rsj.2_Missense_Mutation_p.I374L|EML4_uc010faq.2_Missense_Mutation_p.I30L|EML4_uc010ynv.1_Intron	NM_019063	NP_061936	Q9HC35	EMAL4_HUMAN	echinoderm microtubule associated protein like 4	685	WD 7.				microtubule-based process|mitosis	cytoplasm|microtubule	protein binding		EML4/ALK(246)	lung(246)|ovary(2)|central_nervous_system(1)|skin(1)	250						GCGCTACTCAATAGGTAGGCA	0.423			T	ALK	NSCLC								21	55	---	---	---	---	PASS
NFU1	27247	broad.mit.edu	37	2	69659126	69659126	+	Missense_Mutation	SNP	A	T	T	rs4453725	byFrequency	TCGA-G9-6373-01A-11D-1786-08	TCGA-G9-6373-10A-01D-1786-08									Somatic	Phase_I	Capture				Illumina GAIIx	0caf5af2-ae80-4f39-ac6f-c2dbc2e8b820	906935a6-9e29-4146-a7a0-d60f2507e774	g.chr2:69659126A>T	uc002sfk.2	-	2	273	c.74T>A	c.(73-75)ATG>AAG	p.M25K	NFU1_uc002sfj.2_Missense_Mutation_p.M1K|NFU1_uc002sfl.2_5'UTR|NFU1_uc002sfm.2_5'UTR|NFU1_uc010fdi.2_RNA|NFU1_uc002sfn.1_Missense_Mutation_p.M25K	NM_001002755	NP_001002755	Q9UMS0	NFU1_HUMAN	HIRA interacting protein 5 isoform 2	25					iron-sulfur cluster assembly	cytosol|mitochondrion|nucleus	4 iron, 4 sulfur cluster binding|iron ion binding|protein binding				0						ATTCTTCAACATATGACAGAA	0.348													3	27	---	---	---	---	PASS
C2orf3	6936	broad.mit.edu	37	2	75907351	75907351	+	Missense_Mutation	SNP	T	C	C	rs6722682	byFrequency	TCGA-G9-6373-01A-11D-1786-08	TCGA-G9-6373-10A-01D-1786-08									Somatic	Phase_I	Capture				Illumina GAIIx	0caf5af2-ae80-4f39-ac6f-c2dbc2e8b820	906935a6-9e29-4146-a7a0-d60f2507e774	g.chr2:75907351T>C	uc002sno.2	-	12	1910	c.1780A>G	c.(1780-1782)ACT>GCT	p.T594A	C2orf3_uc010ffs.2_Missense_Mutation_p.T156A|C2orf3_uc002snn.2_Missense_Mutation_p.T425A|C2orf3_uc010fft.2_Missense_Mutation_p.T269A	NM_003203	NP_003194	P16383	GCF_HUMAN	hypothetical protein LOC6936	594					negative regulation of transcription, DNA-dependent	nucleus	DNA binding|protein binding|sequence-specific DNA binding transcription factor activity			ovary(1)|central_nervous_system(1)	2						TTTTCACAAGTGGAATGTTCT	0.328													3	24	---	---	---	---	PASS
Unknown	0	broad.mit.edu	37	2	95539132	95539132	+	Splice_Site	SNP	A	G	G	rs74376788	by1000genomes	TCGA-G9-6373-01A-11D-1786-08	TCGA-G9-6373-10A-01D-1786-08									Somatic	Phase_I	Capture				Illumina GAIIx	0caf5af2-ae80-4f39-ac6f-c2dbc2e8b820	906935a6-9e29-4146-a7a0-d60f2507e774	g.chr2:95539132A>G	uc002stv.1	-	9		c.1317_splice	c.e9+1		TEKT4_uc002stw.1_Intron|TEKT4_uc010fhr.1_RNA					Homo sapiens cDNA FLJ44118 fis, clone TESTI4047069.																		AGCAGAACTTACACAGTCAGA	0.567													2	11	---	---	---	---	PASS
LRP1B	53353	broad.mit.edu	37	2	141680622	141680622	+	Missense_Mutation	SNP	T	G	G			TCGA-G9-6373-01A-11D-1786-08	TCGA-G9-6373-10A-01D-1786-08									Somatic	Phase_I	Capture				Illumina GAIIx	0caf5af2-ae80-4f39-ac6f-c2dbc2e8b820	906935a6-9e29-4146-a7a0-d60f2507e774	g.chr2:141680622T>G	uc002tvj.1	-	21	4203	c.3231A>C	c.(3229-3231)AAA>AAC	p.K1077N	LRP1B_uc010fnl.1_Missense_Mutation_p.K259N	NM_018557	NP_061027	Q9NZR2	LRP1B_HUMAN	low density lipoprotein-related protein 1B	1077	Extracellular (Potential).|LDL-receptor class A 8.				protein transport|receptor-mediated endocytosis	integral to membrane	calcium ion binding			lung(17)|skin(12)|ovary(12)|pancreas(3)|upper_aerodigestive_tract(2)|central_nervous_system(2)|liver(1)|kidney(1)	50		all_cancers(3;1.1e-60)|all_epithelial(3;1.94e-59)|all_lung(3;1.09e-24)|Lung NSC(3;5.65e-24)|Esophageal squamous(3;5.41e-13)|Renal(3;0.000147)|Breast(3;0.000527)|Hepatocellular(3;0.011)|all_neural(3;0.014)|Colorectal(150;0.101)		UCEC - Uterine corpus endometrioid carcinoma (2;0.00139)|Epithelial(1;1.25e-24)|all cancers(1;8.86e-24)|OV - Ovarian serous cystadenocarcinoma(1;2.45e-12)|LUSC - Lung squamous cell carcinoma(1;2.97e-10)|Lung(1;6.05e-09)|BRCA - Breast invasive adenocarcinoma(221;0.0103)		CTTCACAGTCTTTTTCTCCAT	0.418										TSP Lung(27;0.18)			37	40	---	---	---	---	PASS
BAZ2B	29994	broad.mit.edu	37	2	160287661	160287661	+	Missense_Mutation	SNP	T	C	C			TCGA-G9-6373-01A-11D-1786-08	TCGA-G9-6373-10A-01D-1786-08									Somatic	Phase_I	Capture				Illumina GAIIx	0caf5af2-ae80-4f39-ac6f-c2dbc2e8b820	906935a6-9e29-4146-a7a0-d60f2507e774	g.chr2:160287661T>C	uc002uao.2	-	10	2259	c.1907A>G	c.(1906-1908)GAT>GGT	p.D636G	BAZ2B_uc002uap.2_Missense_Mutation_p.D634G|BAZ2B_uc002uaq.1_Intron|BAZ2B_uc002uar.1_Missense_Mutation_p.D209G	NM_013450	NP_038478	Q9UIF8	BAZ2B_HUMAN	bromodomain adjacent to zinc finger domain, 2B	636	Asp/Glu-rich (acidic).				regulation of transcription, DNA-dependent|transcription, DNA-dependent	nucleus	DNA binding|protein binding|zinc ion binding			ovary(3)|skin(1)	4						TGAATTACTATCTGATTCTGG	0.343													13	23	---	---	---	---	PASS
SCN5A	6331	broad.mit.edu	37	3	38627292	38627292	+	Missense_Mutation	SNP	G	A	A			TCGA-G9-6373-01A-11D-1786-08	TCGA-G9-6373-10A-01D-1786-08									Somatic	Phase_I	Capture				Illumina GAIIx	0caf5af2-ae80-4f39-ac6f-c2dbc2e8b820	906935a6-9e29-4146-a7a0-d60f2507e774	g.chr3:38627292G>A	uc003cio.2	-	16	2871	c.2677C>T	c.(2677-2679)CGC>TGC	p.R893C	SCN5A_uc003cin.2_Missense_Mutation_p.R893C|SCN5A_uc003cil.3_Missense_Mutation_p.R893C|SCN5A_uc010hhi.2_Missense_Mutation_p.R893C|SCN5A_uc010hhk.2_Missense_Mutation_p.R893C|SCN5A_uc011ayr.1_Missense_Mutation_p.R893C|SCN5A_uc010hhj.1_Missense_Mutation_p.R504C	NM_198056	NP_932173	Q14524	SCN5A_HUMAN	voltage-gated sodium channel type V alpha	893					blood circulation|cellular response to calcium ion|muscle contraction|regulation of heart contraction	sarcolemma|voltage-gated sodium channel complex	protein binding|voltage-gated sodium channel activity			ovary(4)|pancreas(2)|skin(2)|central_nervous_system(1)	9	Medulloblastoma(35;0.163)			KIRC - Kidney renal clear cell carcinoma(284;0.0822)|Kidney(284;0.1)	Benzonatate(DB00868)|Bepridil(DB01244)|Carbamazepine(DB00564)|Cocaine(DB00907)|Dibucaine(DB00527)|Disopyramide(DB00280)|Encainide(DB01228)|Ethotoin(DB00754)|Flecainide(DB01195)|Fosphenytoin(DB01320)|Hexylcaine(DB00473)|Indecainide(DB00192)|Lamotrigine(DB00555)|Lidocaine(DB00281)|Mephenytoin(DB00532)|Mexiletine(DB00379)|Mibefradil(DB01388)|Moricizine(DB00680)|Oxcarbazepine(DB00776)|Phenytoin(DB00252)|Prilocaine(DB00750)|Procainamide(DB01035)|Propafenone(DB01182)|Quinidine(DB00908)|Riluzole(DB00740)|Tocainide(DB01056)|Verapamil(DB00661)	CAGAGGATGCGGAAGATGATG	0.547													7	107	---	---	---	---	PASS
PLCH1	23007	broad.mit.edu	37	3	155206588	155206588	+	Silent	SNP	G	A	A			TCGA-G9-6373-01A-11D-1786-08	TCGA-G9-6373-10A-01D-1786-08									Somatic	Phase_I	Capture				Illumina GAIIx	0caf5af2-ae80-4f39-ac6f-c2dbc2e8b820	906935a6-9e29-4146-a7a0-d60f2507e774	g.chr3:155206588G>A	uc011bok.1	-	19	2641	c.2364C>T	c.(2362-2364)AAC>AAT	p.N788N	PLCH1_uc011boj.1_Silent_p.N788N|PLCH1_uc011bol.1_Silent_p.N770N	NM_001130960	NP_001124432	Q4KWH8	PLCH1_HUMAN	phospholipase C eta 1 isoform a	788	C2.				lipid catabolic process|phosphatidylinositol-mediated signaling	membrane	calcium ion binding|calcium-dependent phospholipase C activity|phosphatidylinositol phospholipase C activity|signal transducer activity			skin(3)|ovary(1)	4			Lung(72;0.11)|LUSC - Lung squamous cell carcinoma(72;0.114)			CCCACACAGGGTTAAATCCTC	0.428													11	18	---	---	---	---	PASS
PLCH1	23007	broad.mit.edu	37	3	155314034	155314034	+	Silent	SNP	A	G	G	rs359569	byFrequency	TCGA-G9-6373-01A-11D-1786-08	TCGA-G9-6373-10A-01D-1786-08									Somatic	Phase_I	Capture				Illumina GAIIx	0caf5af2-ae80-4f39-ac6f-c2dbc2e8b820	906935a6-9e29-4146-a7a0-d60f2507e774	g.chr3:155314034A>G	uc011bok.1	-	2	454	c.177T>C	c.(175-177)AGT>AGC	p.S59S	PLCH1_uc011boj.1_Silent_p.S59S|PLCH1_uc011bol.1_Silent_p.S41S	NM_001130960	NP_001124432	Q4KWH8	PLCH1_HUMAN	phospholipase C eta 1 isoform a	59	PH.				lipid catabolic process|phosphatidylinositol-mediated signaling	membrane	calcium ion binding|calcium-dependent phospholipase C activity|phosphatidylinositol phospholipase C activity|signal transducer activity			skin(3)|ovary(1)	4			Lung(72;0.11)|LUSC - Lung squamous cell carcinoma(72;0.114)			TTGCCTTCTCACTCTTCCTAG	0.483													12	206	---	---	---	---	PASS
BCL6	604	broad.mit.edu	37	3	187447543	187447543	+	Missense_Mutation	SNP	C	T	T	rs142220629		TCGA-G9-6373-01A-11D-1786-08	TCGA-G9-6373-10A-01D-1786-08									Somatic	Phase_I	Capture				Illumina GAIIx	0caf5af2-ae80-4f39-ac6f-c2dbc2e8b820	906935a6-9e29-4146-a7a0-d60f2507e774	g.chr3:187447543C>T	uc003frp.3	-	5	1107	c.650G>A	c.(649-651)CGG>CAG	p.R217Q	BCL6_uc011bsf.1_Missense_Mutation_p.R217Q|BCL6_uc010hza.2_Missense_Mutation_p.R115Q|BCL6_uc003frq.1_Missense_Mutation_p.R217Q	NM_001130845	NP_001124317	P41182	BCL6_HUMAN	B-cell lymphoma 6 protein isoform 1	217					negative regulation of B cell apoptosis|negative regulation of cell growth|negative regulation of S phase of mitotic cell cycle|negative regulation of transcription from RNA polymerase II promoter|positive regulation of apoptosis|protein import into nucleus, translocation|regulation of germinal center formation|response to DNA damage stimulus	nucleus	protein binding|sequence-specific DNA binding|sequence-specific DNA binding transcription factor activity|zinc ion binding			ovary(2)|lung(2)|central_nervous_system(1)	5	all_cancers(143;9.45e-12)|Ovarian(172;0.0418)		OV - Ovarian serous cystadenocarcinoma(80;1.76e-18)	GBM - Glioblastoma multiforme(93;0.0141)		CACAGGCATCCGGACATCCCG	0.612			T|Mis	IG loci|ZNFN1A1|LCP1|PIM1|TFRC|MHC2TA|NACA|HSPCB|HSPCA|HIST1H4I|IL21R| POU2AF1|ARHH|EIF4A2|SFRS3	NHL|CLL								21	32	---	---	---	---	PASS
HPGD	3248	broad.mit.edu	37	4	175416699	175416699	+	Silent	SNP	C	A	A			TCGA-G9-6373-01A-11D-1786-08	TCGA-G9-6373-10A-01D-1786-08									Somatic	Phase_I	Capture				Illumina GAIIx	0caf5af2-ae80-4f39-ac6f-c2dbc2e8b820	906935a6-9e29-4146-a7a0-d60f2507e774	g.chr4:175416699C>A	uc003itu.2	-	5	688	c.498G>T	c.(496-498)GCG>GCT	p.A166A	HPGD_uc003itt.2_Silent_p.A33A|HPGD_uc003itv.2_Silent_p.A166A|HPGD_uc011ckf.1_Silent_p.A45A|HPGD_uc010irp.2_Silent_p.A45A|HPGD_uc010irq.2_Intron|HPGD_uc011ckg.1_Silent_p.A98A|HPGD_uc011ckh.1_Silent_p.A45A|HPGD_uc003itw.2_Silent_p.A166A	NM_000860	NP_000851	P15428	PGDH_HUMAN	hydroxyprostaglandin dehydrogenase 15-(NAD)	166					female pregnancy|lipoxygenase pathway|negative regulation of cell cycle|parturition|prostaglandin metabolic process|transforming growth factor beta receptor signaling pathway	cytosol|nucleus	15-hydroxyprostaglandin dehydrogenase (NAD+) activity|NAD+ binding|prostaglandin E receptor activity|protein homodimerization activity				0		Prostate(90;0.00763)|Melanoma(52;0.0179)|Renal(120;0.0376)|Breast(14;0.0991)|all_hematologic(60;0.124)|all_neural(102;0.196)		all cancers(43;2.6e-18)|Epithelial(43;4.19e-16)|OV - Ovarian serous cystadenocarcinoma(60;5.23e-09)|GBM - Glioblastoma multiforme(59;0.00176)|STAD - Stomach adenocarcinoma(60;0.00299)|LUSC - Lung squamous cell carcinoma(193;0.0253)	NADH(DB00157)	GTAGCCTCACCGCTGCTGAGC	0.408													22	48	---	---	---	---	PASS
ACTBL2	345651	broad.mit.edu	37	5	56778328	56778328	+	Missense_Mutation	SNP	C	A	A			TCGA-G9-6373-01A-11D-1786-08	TCGA-G9-6373-10A-01D-1786-08									Somatic	Phase_I	Capture				Illumina GAIIx	0caf5af2-ae80-4f39-ac6f-c2dbc2e8b820	906935a6-9e29-4146-a7a0-d60f2507e774	g.chr5:56778328C>A	uc003jrm.2	-	1	309	c.207G>T	c.(205-207)AAG>AAT	p.K69N		NM_001017992	NP_001017992	Q562R1	ACTBL_HUMAN	actin, beta-like 2	69						cytoplasm|cytoskeleton	ATP binding			ovary(3)	3		Lung NSC(810;0.000135)|Prostate(74;0.055)|Breast(144;0.0707)|Ovarian(174;0.182)		OV - Ovarian serous cystadenocarcinoma(10;4.24e-37)		CGATAGGATACTTCAGGGTCA	0.547													17	35	---	---	---	---	PASS
ZFYVE16	9765	broad.mit.edu	37	5	79752812	79752812	+	Missense_Mutation	SNP	G	A	A			TCGA-G9-6373-01A-11D-1786-08	TCGA-G9-6373-10A-01D-1786-08									Somatic	Phase_I	Capture				Illumina GAIIx	0caf5af2-ae80-4f39-ac6f-c2dbc2e8b820	906935a6-9e29-4146-a7a0-d60f2507e774	g.chr5:79752812G>A	uc003kgr.3	+	14	4146	c.3844G>A	c.(3844-3846)GCA>ACA	p.A1282T	ZFYVE16_uc003kgq.3_Missense_Mutation_p.A1282T|ZFYVE16_uc003kgs.3_Missense_Mutation_p.A1282T|ZFYVE16_uc003kgt.3_Missense_Mutation_p.A370T|ZFYVE16_uc003kgu.3_Missense_Mutation_p.A34T	NM_001105251	NP_001098721	Q7Z3T8	ZFY16_HUMAN	zinc finger, FYVE domain containing 16	1282					BMP signaling pathway|endosome transport|protein targeting to lysosome|regulation of endocytosis|vesicle organization	early endosome membrane	1-phosphatidylinositol binding|metal ion binding|phosphatidylinositol-3,4,5-trisphosphate binding|protein binding|protein transporter activity				0		Lung NSC(167;0.00428)|all_lung(232;0.00455)|Ovarian(174;0.0261)		OV - Ovarian serous cystadenocarcinoma(54;1.6e-46)|Epithelial(54;2.02e-41)|all cancers(79;5.05e-36)		TAGCATTGGAGCAAGTTTCAG	0.343													8	21	---	---	---	---	PASS
ELL2	22936	broad.mit.edu	37	5	95236415	95236415	+	Silent	SNP	G	A	A	rs17085249	byFrequency	TCGA-G9-6373-01A-11D-1786-08	TCGA-G9-6373-10A-01D-1786-08									Somatic	Phase_I	Capture				Illumina GAIIx	0caf5af2-ae80-4f39-ac6f-c2dbc2e8b820	906935a6-9e29-4146-a7a0-d60f2507e774	g.chr5:95236415G>A	uc003klr.3	-	7	1286	c.936C>T	c.(934-936)GAC>GAT	p.D312D		NM_012081	NP_036213	O00472	ELL2_HUMAN	elongation factor, RNA polymerase II, 2	312					regulation of transcription, DNA-dependent|transcription elongation from RNA polymerase II promoter	transcription elongation factor complex				central_nervous_system(1)	1		all_cancers(142;2.04e-06)|all_epithelial(76;3.1e-09)|all_lung(232;0.00309)|Lung NSC(167;0.00454)|Ovarian(225;0.0165)|Colorectal(57;0.0343)|Breast(839;0.198)		all cancers(79;2.16e-15)		AAGATACAGCGTCTCTACTAG	0.274													4	44	---	---	---	---	PASS
DST	667	broad.mit.edu	37	6	56417898	56417898	+	Missense_Mutation	SNP	C	T	T			TCGA-G9-6373-01A-11D-1786-08	TCGA-G9-6373-10A-01D-1786-08									Somatic	Phase_I	Capture				Illumina GAIIx	0caf5af2-ae80-4f39-ac6f-c2dbc2e8b820	906935a6-9e29-4146-a7a0-d60f2507e774	g.chr6:56417898C>T	uc003pdf.2	-	55	9363	c.9335G>A	c.(9334-9336)AGC>AAC	p.S3112N	DST_uc003pcz.3_Missense_Mutation_p.S2934N|DST_uc011dxj.1_Missense_Mutation_p.S2963N|DST_uc011dxk.1_Missense_Mutation_p.S2974N|DST_uc003pcy.3_Missense_Mutation_p.S2608N	NM_001144769	NP_001138241	Q03001	DYST_HUMAN	dystonin isoform 2	5020					cell adhesion|cell cycle arrest|cell motility|hemidesmosome assembly|integrin-mediated signaling pathway|intermediate filament cytoskeleton organization|maintenance of cell polarity|microtubule cytoskeleton organization|response to wounding	actin cytoskeleton|axon|axon part|basement membrane|cell cortex|cell leading edge|cytoplasmic membrane-bounded vesicle|endoplasmic reticulum membrane|hemidesmosome|hemidesmosome|integral to membrane|intermediate filament|intermediate filament cytoskeleton|microtubule cytoskeleton|microtubule plus end|nuclear envelope|sarcomere|Z disc	actin binding|calcium ion binding|integrin binding|microtubule plus-end binding|protein binding|protein C-terminus binding|protein homodimerization activity			ovary(7)|central_nervous_system(6)|upper_aerodigestive_tract(1)	14	Lung NSC(77;0.103)		LUSC - Lung squamous cell carcinoma(124;0.0485)|Lung(124;0.0956)			ACTGAGCAAGCTATTGGCTGT	0.413													53	126	---	---	---	---	PASS
PLG	5340	broad.mit.edu	37	6	161139480	161139480	+	Silent	SNP	C	T	T	rs1130656	byFrequency	TCGA-G9-6373-01A-11D-1786-08	TCGA-G9-6373-10A-01D-1786-08									Somatic	Phase_I	Capture				Illumina GAIIx	0caf5af2-ae80-4f39-ac6f-c2dbc2e8b820	906935a6-9e29-4146-a7a0-d60f2507e774	g.chr6:161139480C>T	uc003qtm.3	+	8	1005	c.942C>T	c.(940-942)TTC>TTT	p.F314F		NM_000301	NP_000292	P00747	PLMN_HUMAN	plasminogen	314	Kringle 3.				extracellular matrix disassembly|fibrinolysis|negative regulation of cell proliferation|negative regulation of cell-substrate adhesion|negative regulation of fibrinolysis|platelet activation|platelet degranulation|positive regulation of fibrinolysis|proteolysis|tissue remodeling	extracellular space|extrinsic to external side of plasma membrane|platelet alpha granule lumen	apolipoprotein binding|cell surface binding|serine-type endopeptidase activity			skin(3)|ovary(1)	4				OV - Ovarian serous cystadenocarcinoma(65;5.24e-17)|BRCA - Breast invasive adenocarcinoma(81;7.08e-06)	Aminocaproic Acid(DB00513)|Streptokinase(DB00086)|Tranexamic Acid(DB00302)|Urokinase(DB00013)	CAGAAAACTTCCCCTGCAAGT	0.493													5	84	---	---	---	---	PASS
STAG3L2	442582	broad.mit.edu	37	7	74298939	74298939	+	RNA	SNP	G	C	C	rs142156061	by1000genomes	TCGA-G9-6373-01A-11D-1786-08	TCGA-G9-6373-10A-01D-1786-08									Somatic	Phase_I	Capture				Illumina GAIIx	0caf5af2-ae80-4f39-ac6f-c2dbc2e8b820	906935a6-9e29-4146-a7a0-d60f2507e774	g.chr7:74298939G>C	uc011kfj.1	-	6		c.728C>G						P0CL84	ST3L2_HUMAN	Homo sapiens cDNA FLJ76564 complete cds.							nucleus	binding				0						TTTCCCCCACGCCATGCCACC	0.537													3	22	---	---	---	---	PASS
POM121C	100101267	broad.mit.edu	37	7	75048146	75048146	+	Missense_Mutation	SNP	G	A	A			TCGA-G9-6373-01A-11D-1786-08	TCGA-G9-6373-10A-01D-1786-08									Somatic	Phase_I	Capture				Illumina GAIIx	0caf5af2-ae80-4f39-ac6f-c2dbc2e8b820	906935a6-9e29-4146-a7a0-d60f2507e774	g.chr7:75048146G>A	uc003udk.3	-	15	3782	c.2897C>T	c.(2896-2898)GCG>GTG	p.A966V		NM_001099415	NP_001092885	A8CG34	P121C_HUMAN	POM121 membrane glycoprotein (rat)-like	1208	Pore side (Potential).				mRNA transport|protein transport|transmembrane transport	endoplasmic reticulum membrane|nuclear membrane|nuclear pore	protein binding				0						CTTGGATCCCGCACCAATGGA	0.597													4	56	---	---	---	---	PASS
Unknown	0	broad.mit.edu	37	7	100607821	100607821	+	RNA	SNP	G	A	A			TCGA-G9-6373-01A-11D-1786-08	TCGA-G9-6373-10A-01D-1786-08									Somatic	Phase_I	Capture				Illumina GAIIx	0caf5af2-ae80-4f39-ac6f-c2dbc2e8b820	906935a6-9e29-4146-a7a0-d60f2507e774	g.chr7:100607821G>A	uc003uxk.1	+	4		c.2352G>A			uc003uxl.1_Silent_p.E556E|uc003uxm.1_RNA|uc003uxn.1_RNA|uc010lhn.1_5'Flank					Homo sapiens MUC3B mRNA for intestinal mucin, partial cds.																		GCGAGTATGAGCAGGTGAAGA	0.637													9	94	---	---	---	---	PASS
ZC3HAV1	56829	broad.mit.edu	37	7	138740037	138740037	+	Missense_Mutation	SNP	G	C	C	rs2297236	byFrequency	TCGA-G9-6373-01A-11D-1786-08	TCGA-G9-6373-10A-01D-1786-08									Somatic	Phase_I	Capture				Illumina GAIIx	0caf5af2-ae80-4f39-ac6f-c2dbc2e8b820	906935a6-9e29-4146-a7a0-d60f2507e774	g.chr7:138740037G>C	uc003vun.2	-	10	2489	c.2101C>G	c.(2101-2103)CAG>GAG	p.Q701E		NM_020119	NP_064504	Q7Z2W4	ZCCHV_HUMAN	zinc finger antiviral protein isoform 1	701					response to virus	cytoplasm|nucleus	NAD+ ADP-ribosyltransferase activity|RNA binding|zinc ion binding			ovary(1)	1						TTTGCTGGCTGATGGCTACAA	0.443													5	67	---	---	---	---	PASS
HOOK3	84376	broad.mit.edu	37	8	42852766	42852766	+	Missense_Mutation	SNP	T	C	C			TCGA-G9-6373-01A-11D-1786-08	TCGA-G9-6373-10A-01D-1786-08									Somatic	Phase_I	Capture				Illumina GAIIx	0caf5af2-ae80-4f39-ac6f-c2dbc2e8b820	906935a6-9e29-4146-a7a0-d60f2507e774	g.chr8:42852766T>C	uc003xpr.2	+	16	1848	c.1606T>C	c.(1606-1608)TCA>CCA	p.S536P	HOOK3_uc010lxq.1_Missense_Mutation_p.S536P	NM_032410	NP_115786	Q86VS8	HOOK3_HUMAN	golgi-associated microtubule-binding protein	536	Potential.				cytoplasmic microtubule organization|early endosome to late endosome transport|endosome organization|endosome to lysosome transport|Golgi localization|interkinetic nuclear migration|lysosome organization|microtubule anchoring|negative regulation of neurogenesis|protein localization to centrosome|protein transport	cis-Golgi network|FHF complex|microtubule|pericentriolar material	identical protein binding|microtubule binding			ovary(1)|breast(1)	2	Ovarian(28;0.01)|Prostate(17;0.0119)|Lung SC(25;0.184)	all_lung(54;0.000105)|Lung NSC(58;0.000419)|Hepatocellular(245;0.0524)|Renal(179;0.0822)|Esophageal squamous(32;0.129)	Lung(22;0.048)|LUSC - Lung squamous cell carcinoma(45;0.114)			GGATCAAGGCTCAAAAGCAGA	0.308			T	RET	papillary thyroid								5	22	---	---	---	---	PASS
COL22A1	169044	broad.mit.edu	37	8	139662012	139662012	+	Missense_Mutation	SNP	T	C	C			TCGA-G9-6373-01A-11D-1786-08	TCGA-G9-6373-10A-01D-1786-08									Somatic	Phase_I	Capture				Illumina GAIIx	0caf5af2-ae80-4f39-ac6f-c2dbc2e8b820	906935a6-9e29-4146-a7a0-d60f2507e774	g.chr8:139662012T>C	uc003yvd.2	-	46	3790	c.3343A>G	c.(3343-3345)AAT>GAT	p.N1115D	COL22A1_uc011ljo.1_Missense_Mutation_p.N395D	NM_152888	NP_690848	Q8NFW1	COMA1_HUMAN	collagen, type XXII, alpha 1	1115	Pro-rich.|Gly-rich.				cell adhesion	collagen|cytoplasm	structural molecule activity			ovary(11)|pancreas(1)|skin(1)	13	all_epithelial(106;1.55e-12)|Lung NSC(106;1.67e-05)|all_lung(105;3.39e-05)|Ovarian(258;0.00672)|Acute lymphoblastic leukemia(118;0.155)		BRCA - Breast invasive adenocarcinoma(115;0.0517)			GGGCAGTCATTGCACACATCC	0.532										HNSCC(7;0.00092)			54	61	---	---	---	---	PASS
APBA1	320	broad.mit.edu	37	9	72131722	72131722	+	Silent	SNP	G	A	A			TCGA-G9-6373-01A-11D-1786-08	TCGA-G9-6373-10A-01D-1786-08									Somatic	Phase_I	Capture				Illumina GAIIx	0caf5af2-ae80-4f39-ac6f-c2dbc2e8b820	906935a6-9e29-4146-a7a0-d60f2507e774	g.chr9:72131722G>A	uc004ahh.2	-	2	681	c.405C>T	c.(403-405)GCC>GCT	p.A135A		NM_001163	NP_001154	Q02410	APBA1_HUMAN	amyloid beta A4 precursor protein-binding,	135					axon cargo transport|cell adhesion|intracellular protein transport|nervous system development|protein complex assembly|synaptic transmission	synaptic vesicle				lung(1)	1						CGGCGTGCTCGGCCTCTGCCT	0.692													18	55	---	---	---	---	PASS
C9orf171	389799	broad.mit.edu	37	9	135374898	135374898	+	Silent	SNP	T	C	C	rs562350	byFrequency	TCGA-G9-6373-01A-11D-1786-08	TCGA-G9-6373-10A-01D-1786-08									Somatic	Phase_I	Capture				Illumina GAIIx	0caf5af2-ae80-4f39-ac6f-c2dbc2e8b820	906935a6-9e29-4146-a7a0-d60f2507e774	g.chr9:135374898T>C	uc004cbn.2	+	4	591	c.543T>C	c.(541-543)AAT>AAC	p.N181N	C9orf171_uc004cbo.2_Silent_p.N145N	NM_207417	NP_997300	Q6ZQR2	CI171_HUMAN	hypothetical protein LOC389799	181										ovary(4)|large_intestine(1)	5						GTCAGCTCAATGACATCCGCA	0.602													7	159	---	---	---	---	PASS
UNC93B1	81622	broad.mit.edu	37	11	67759287	67759287	+	Silent	SNP	C	A	A			TCGA-G9-6373-01A-11D-1786-08	TCGA-G9-6373-10A-01D-1786-08									Somatic	Phase_I	Capture				Illumina GAIIx	0caf5af2-ae80-4f39-ac6f-c2dbc2e8b820	906935a6-9e29-4146-a7a0-d60f2507e774	g.chr11:67759287C>A	uc001omw.1	-	12	1604	c.1524G>T	c.(1522-1524)GCG>GCT	p.A508A		NM_030930	NP_112192	Q9H1C4	UN93B_HUMAN	unc-93 homolog B1	508	Helical; (Potential).				innate immune response|intracellular protein transport|response to virus|toll-like receptor 3 signaling pathway|toll-like receptor 7 signaling pathway|toll-like receptor 9 signaling pathway	early phagosome|endoplasmic reticulum membrane|endosome|integral to membrane|lysosome					0						GGTAGGAGACCGCGGCCGCCA	0.741													3	8	---	---	---	---	PASS
GUCY1A2	2977	broad.mit.edu	37	11	106558447	106558447	+	Missense_Mutation	SNP	G	A	A			TCGA-G9-6373-01A-11D-1786-08	TCGA-G9-6373-10A-01D-1786-08									Somatic	Phase_I	Capture				Illumina GAIIx	0caf5af2-ae80-4f39-ac6f-c2dbc2e8b820	906935a6-9e29-4146-a7a0-d60f2507e774	g.chr11:106558447G>A	uc001pjg.1	-	8	2417	c.2027C>T	c.(2026-2028)CCG>CTG	p.P676L	GUCY1A2_uc010rvo.1_Missense_Mutation_p.P697L|GUCY1A2_uc009yxn.1_Missense_Mutation_p.P707L	NM_000855	NP_000846	P33402	GCYA2_HUMAN	guanylate cyclase 1, soluble, alpha 2	676					intracellular signal transduction|platelet activation	cytoplasm	GTP binding|guanylate cyclase activity|heme binding			large_intestine(3)|lung(2)|pancreas(2)|ovary(1)	8		all_epithelial(67;3.66e-05)|Melanoma(852;0.000382)|Acute lymphoblastic leukemia(157;0.001)|all_hematologic(158;0.0017)|Breast(348;0.026)|all_neural(303;0.068)		BRCA - Breast invasive adenocarcinoma(274;8.04e-05)|Epithelial(105;0.0036)|all cancers(92;0.0476)		ACGAGACCGCGGAATGAATGT	0.418													40	82	---	---	---	---	PASS
KIAA1467	57613	broad.mit.edu	37	12	13208628	13208628	+	Missense_Mutation	SNP	G	A	A			TCGA-G9-6373-01A-11D-1786-08	TCGA-G9-6373-10A-01D-1786-08									Somatic	Phase_I	Capture				Illumina GAIIx	0caf5af2-ae80-4f39-ac6f-c2dbc2e8b820	906935a6-9e29-4146-a7a0-d60f2507e774	g.chr12:13208628G>A	uc001rbi.2	+	2	204	c.181G>A	c.(181-183)GAC>AAC	p.D61N	KIAA1467_uc009zhx.1_RNA	NM_020853	NP_065904	A2RU67	K1467_HUMAN	hypothetical protein LOC57613	61						integral to membrane				central_nervous_system(2)|skin(1)	3		Prostate(47;0.184)		BRCA - Breast invasive adenocarcinoma(232;0.157)		GCCAGAACCCGACTCAGATGC	0.557													28	47	---	---	---	---	PASS
MED13L	23389	broad.mit.edu	37	12	116446812	116446812	+	Missense_Mutation	SNP	G	A	A			TCGA-G9-6373-01A-11D-1786-08	TCGA-G9-6373-10A-01D-1786-08									Somatic	Phase_I	Capture				Illumina GAIIx	0caf5af2-ae80-4f39-ac6f-c2dbc2e8b820	906935a6-9e29-4146-a7a0-d60f2507e774	g.chr12:116446812G>A	uc001tvw.2	-	10	1461	c.1406C>T	c.(1405-1407)ACA>ATA	p.T469I		NM_015335	NP_056150	Q71F56	MD13L_HUMAN	mediator complex subunit 13-like	469					regulation of transcription from RNA polymerase II promoter|transcription, DNA-dependent					skin(4)|ovary(2)|upper_aerodigestive_tract(1)|lung(1)	8	all_neural(191;0.117)|Medulloblastoma(191;0.163)			BRCA - Breast invasive adenocarcinoma(302;0.0407)		TCTTTCTGCTGTTTTGTGCTT	0.478													40	69	---	---	---	---	PASS
CHFR	55743	broad.mit.edu	37	12	133434118	133434118	+	Silent	SNP	G	A	A	rs138280939		TCGA-G9-6373-01A-11D-1786-08	TCGA-G9-6373-10A-01D-1786-08									Somatic	Phase_I	Capture				Illumina GAIIx	0caf5af2-ae80-4f39-ac6f-c2dbc2e8b820	906935a6-9e29-4146-a7a0-d60f2507e774	g.chr12:133434118G>A	uc001ulf.2	-	9	1059	c.975C>T	c.(973-975)TGC>TGT	p.C325C	CHFR_uc001ulc.1_RNA|CHFR_uc001ule.2_Silent_p.C313C|CHFR_uc010tbs.1_Silent_p.C325C|CHFR_uc001uld.2_Silent_p.C284C|CHFR_uc010tbt.1_Silent_p.C233C	NM_001161344	NP_001154816	Q96EP1	CHFR_HUMAN	checkpoint with forkhead and ring finger domains	325	RING-type.				cell division|mitosis|mitotic cell cycle checkpoint|modification-dependent protein catabolic process|protein polyubiquitination	PML body	nucleotide binding|protein binding|ubiquitin-protein ligase activity|zinc ion binding			skin(1)	1	all_neural(191;0.0982)|Medulloblastoma(191;0.163)	all_cancers(7;0.00552)|all_epithelial(31;0.226)		OV - Ovarian serous cystadenocarcinoma(86;2.59e-08)|Epithelial(86;6.38e-07)|all cancers(50;1.56e-05)		AGCAAGCCGCGCAGAACGTGT	0.597													3	28	---	---	---	---	PASS
CSNK1A1L	122011	broad.mit.edu	37	13	37679268	37679268	+	Missense_Mutation	SNP	G	T	T	rs9576175	byFrequency	TCGA-G9-6373-01A-11D-1786-08	TCGA-G9-6373-10A-01D-1786-08									Somatic	Phase_I	Capture				Illumina GAIIx	0caf5af2-ae80-4f39-ac6f-c2dbc2e8b820	906935a6-9e29-4146-a7a0-d60f2507e774	g.chr13:37679268G>T	uc001uwm.1	-	1	534	c.126C>A	c.(124-126)GAC>GAA	p.D42E		NM_145203	NP_660204	Q8N752	KC1AL_HUMAN	casein kinase 1, alpha 1-like	42	Protein kinase.				Wnt receptor signaling pathway	cytoplasm	ATP binding|protein serine/threonine kinase activity			large_intestine(1)	1		Lung NSC(96;7.97e-05)|Breast(139;0.0615)|Lung SC(185;0.0743)|Prostate(109;0.109)		all cancers(112;3.58e-07)|Epithelial(112;1.29e-05)|OV - Ovarian serous cystadenocarcinoma(117;0.00695)|BRCA - Breast invasive adenocarcinoma(63;0.0117)|GBM - Glioblastoma multiforme(144;0.0407)		TCACTGCTACGTCCTCGCCGT	0.542													7	119	---	---	---	---	PASS
TMTC4	84899	broad.mit.edu	37	13	101316518	101316518	+	Missense_Mutation	SNP	T	G	G	rs74554757		TCGA-G9-6373-01A-11D-1786-08	TCGA-G9-6373-10A-01D-1786-08									Somatic	Phase_I	Capture				Illumina GAIIx	0caf5af2-ae80-4f39-ac6f-c2dbc2e8b820	906935a6-9e29-4146-a7a0-d60f2507e774	g.chr13:101316518T>G	uc001vou.2	-	3	395	c.235A>C	c.(235-237)ACC>CCC	p.T79P	TMTC4_uc001vot.2_Missense_Mutation_p.T98P|TMTC4_uc010tja.1_Intron	NM_001079669	NP_001073137	Q5T4D3	TMTC4_HUMAN	transmembrane and tetratricopeptide repeat	79						integral to membrane	binding			ovary(2)|breast(1)	3	all_neural(89;0.0837)|Medulloblastoma(90;0.18)|Lung SC(71;0.184)					TTGTGGCTGGTGTTGCTGCTC	0.577													5	15	---	---	---	---	PASS
OR4N4	283694	broad.mit.edu	37	15	22383189	22383189	+	Silent	SNP	G	A	A	rs1820851	by1000genomes	TCGA-G9-6373-01A-11D-1786-08	TCGA-G9-6373-10A-01D-1786-08									Somatic	Phase_I	Capture				Illumina GAIIx	0caf5af2-ae80-4f39-ac6f-c2dbc2e8b820	906935a6-9e29-4146-a7a0-d60f2507e774	g.chr15:22383189G>A	uc001yuc.1	+	7	1698	c.717G>A	c.(715-717)ACG>ACA	p.T239T	LOC727924_uc001yub.1_Intron|OR4N4_uc010tzv.1_Missense_Mutation_p.M239I	NM_001005241	NP_001005241	Q8N0Y3	OR4N4_HUMAN	olfactory receptor, family 4, subfamily N,	239	Helical; Name=6; (Potential).				sensory perception of smell	integral to membrane|plasma membrane	olfactory receptor activity			ovary(4)|skin(1)	5		all_cancers(20;1.94e-20)|all_epithelial(15;3.94e-18)|Lung NSC(15;8.53e-15)|all_lung(15;2.87e-14)|Breast(32;0.00519)|Colorectal(260;0.101)	GBM - Glioblastoma multiforme(6;0.124)	all cancers(64;1.64e-11)|Epithelial(43;5.81e-10)|BRCA - Breast invasive adenocarcinoma(123;0.000255)|Kidney(6;0.00736)|KIRC - Kidney renal clear cell carcinoma(6;0.0135)|GBM - Glioblastoma multiforme(186;0.0963)		CCATGTCCACGTGCACCACTC	0.493													5	54	---	---	---	---	PASS
HAPLN3	145864	broad.mit.edu	37	15	89421405	89421405	+	Silent	SNP	G	A	A	rs7182726	byFrequency	TCGA-G9-6373-01A-11D-1786-08	TCGA-G9-6373-10A-01D-1786-08									Somatic	Phase_I	Capture				Illumina GAIIx	0caf5af2-ae80-4f39-ac6f-c2dbc2e8b820	906935a6-9e29-4146-a7a0-d60f2507e774	g.chr15:89421405G>A	uc002bnc.2	-	5	1007	c.879C>T	c.(877-879)ATC>ATT	p.I293I	HAPLN3_uc002bne.2_RNA|HAPLN3_uc002bnd.2_Silent_p.I355I	NM_178232	NP_839946	Q96S86	HPLN3_HUMAN	hyaluronan and proteoglycan link protein 3	293	Link 2.				cell adhesion	proteinaceous extracellular matrix	hyaluronic acid binding				0	Lung NSC(78;0.0392)|all_lung(78;0.077)					CCACCTTGGCGATCGTGGCAT	0.642													8	158	---	---	---	---	PASS
VASN	114990	broad.mit.edu	37	16	4432596	4432596	+	Missense_Mutation	SNP	A	C	C	rs76495149		TCGA-G9-6373-01A-11D-1786-08	TCGA-G9-6373-10A-01D-1786-08									Somatic	Phase_I	Capture				Illumina GAIIx	0caf5af2-ae80-4f39-ac6f-c2dbc2e8b820	906935a6-9e29-4146-a7a0-d60f2507e774	g.chr16:4432596A>C	uc002cwj.1	+	2	1873	c.1718A>C	c.(1717-1719)AAC>ACC	p.N573T	CORO7_uc002cwe.2_Intron|CORO7_uc002cwf.2_Intron|CORO7_uc002cwg.3_Intron|CORO7_uc002cwh.3_Intron|CORO7_uc010uxh.1_Intron|CORO7_uc010uxi.1_Intron|CORO7_uc002cwi.1_Intron|CORO7_uc010uxj.1_Intron|CORO7_uc010btp.1_Intron	NM_138440	NP_612449	Q6EMK4	VASN_HUMAN	slit-like 2 precursor	573	Extracellular (Potential).					extracellular region|integral to membrane					0						CGCGAGGGCAACCTGCCGCTC	0.771													4	12	---	---	---	---	PASS
ITGAM	3684	broad.mit.edu	37	16	31336719	31336719	+	Silent	SNP	G	A	A	rs1143682	by1000genomes	TCGA-G9-6373-01A-11D-1786-08	TCGA-G9-6373-10A-01D-1786-08									Somatic	Phase_I	Capture				Illumina GAIIx	0caf5af2-ae80-4f39-ac6f-c2dbc2e8b820	906935a6-9e29-4146-a7a0-d60f2507e774	g.chr16:31336719G>A	uc002ebq.2	+	20	2597	c.2499G>A	c.(2497-2499)ACG>ACA	p.T833T	ITGAM_uc002ebr.2_Silent_p.T834T|ITGAM_uc010can.2_Silent_p.T239T|ITGAM_uc002ebs.1_Silent_p.T239T|ITGAM_uc010vfj.1_RNA	NM_000632	NP_000623	P11215	ITAM_HUMAN	integrin alpha M isoform 2 precursor	833	Extracellular (Potential).				blood coagulation|cell adhesion|integrin-mediated signaling pathway|leukocyte migration	integrin complex	glycoprotein binding|receptor activity			kidney(1)	1						AGGTGTCCACGCTCCAGGTAG	0.562													5	94	---	---	---	---	PASS
SLC13A5	284111	broad.mit.edu	37	17	6607201	6607201	+	Silent	SNP	C	A	A			TCGA-G9-6373-01A-11D-1786-08	TCGA-G9-6373-10A-01D-1786-08									Somatic	Phase_I	Capture				Illumina GAIIx	0caf5af2-ae80-4f39-ac6f-c2dbc2e8b820	906935a6-9e29-4146-a7a0-d60f2507e774	g.chr17:6607201C>A	uc002gdj.2	-	4	631	c.543G>T	c.(541-543)CTG>CTT	p.L181L	SLC13A5_uc010vtf.1_Silent_p.L181L|SLC13A5_uc010clq.2_Silent_p.L138L|SLC13A5_uc002gdk.2_Silent_p.L164L|SLC13A5_uc002gdl.1_Silent_p.L163L	NM_177550	NP_808218	Q86YT5	S13A5_HUMAN	solute carrier family 13, member 5 isoform a	181						integral to membrane	citrate transmembrane transporter activity				0						GCTCACCTGGCAGCTCCTTGG	0.642													6	28	---	---	---	---	PASS
PIK3R5	23533	broad.mit.edu	37	17	8792171	8792171	+	Silent	SNP	T	C	C	rs11650737	byFrequency	TCGA-G9-6373-01A-11D-1786-08	TCGA-G9-6373-10A-01D-1786-08									Somatic	Phase_I	Capture				Illumina GAIIx	0caf5af2-ae80-4f39-ac6f-c2dbc2e8b820	906935a6-9e29-4146-a7a0-d60f2507e774	g.chr17:8792171T>C	uc002glt.2	-	10	1000	c.933A>G	c.(931-933)CTA>CTG	p.L311L	PIK3R5_uc010vuz.1_Silent_p.L311L|PIK3R5_uc002glu.3_5'UTR|PIK3R5_uc010coa.1_Missense_Mutation_p.Y260C|PIK3R5_uc010cob.1_5'UTR	NM_014308	NP_055123	Q8WYR1	PI3R5_HUMAN	phosphoinositide-3-kinase, regulatory subunit 5	311				DILQEILLKEQELLQPGILGDDEEEEEEEEEVEEDLETDGH CAERDSLLSTSSLASHDSTLSLASSQASG -> GNIEGDPG PRRPDSAGLASLQTSCRKSCSRNRSYSSQGSWEMMKRRERR RRRWRRTWKLTGTVPREIPCS (in Ref. 6; AAW63121).	platelet activation	cytosol|membrane|nucleus				breast(2)|large_intestine(1)|central_nervous_system(1)|skin(1)	5						CTGGCTGGAGTAGCTCCTGTT	0.468													3	30	---	---	---	---	PASS
KRT10	3858	broad.mit.edu	37	17	38978462	38978462	+	Missense_Mutation	SNP	C	T	T	rs77919366	byFrequency	TCGA-G9-6373-01A-11D-1786-08	TCGA-G9-6373-10A-01D-1786-08									Somatic	Phase_I	Capture				Illumina GAIIx	0caf5af2-ae80-4f39-ac6f-c2dbc2e8b820	906935a6-9e29-4146-a7a0-d60f2507e774	g.chr17:38978462C>T	uc002hvi.2	-	1	402	c.376G>A	c.(376-378)GGC>AGC	p.G126S	KRT10_uc010cxd.2_5'Flank|TMEM99_uc002hvj.1_Intron	NM_000421	NP_000412	P13645	K1C10_HUMAN	keratin 10	126	Head.|Gly-rich.		G -> S.		epidermis development		protein binding|structural constituent of epidermis				0		Breast(137;0.000301)				cctccaaagccgcctccaCCA	0.428													3	30	---	---	---	---	PASS
CDC27	996	broad.mit.edu	37	17	45247328	45247328	+	Missense_Mutation	SNP	C	T	T			TCGA-G9-6373-01A-11D-1786-08	TCGA-G9-6373-10A-01D-1786-08									Somatic	Phase_I	Capture				Illumina GAIIx	0caf5af2-ae80-4f39-ac6f-c2dbc2e8b820	906935a6-9e29-4146-a7a0-d60f2507e774	g.chr17:45247328C>T	uc002ild.3	-	4	459	c.332G>A	c.(331-333)GGT>GAT	p.G111D	CDC27_uc002ile.3_Missense_Mutation_p.G111D|CDC27_uc002ilf.3_Missense_Mutation_p.G111D|CDC27_uc010wkp.1_Missense_Mutation_p.G50D|CDC27_uc010wkq.1_RNA	NM_001256	NP_001247	P30260	CDC27_HUMAN	cell division cycle protein 27 isoform 2	111	TPR 1.				anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process|cell proliferation|mitotic cell cycle spindle assembly checkpoint|mitotic metaphase/anaphase transition|negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle|positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle|protein K11-linked ubiquitination	anaphase-promoting complex|centrosome|cytosol|nucleoplasm|spindle microtubule	protein phosphatase binding			lung(2)|breast(2)|ovary(1)	5						AGCTGAATCACCAAACTCAGT	0.328													7	88	---	---	---	---	PASS
C17orf77	146723	broad.mit.edu	37	17	72588326	72588326	+	Missense_Mutation	SNP	A	C	C	rs493430	byFrequency	TCGA-G9-6373-01A-11D-1786-08	TCGA-G9-6373-10A-01D-1786-08									Somatic	Phase_I	Capture				Illumina GAIIx	0caf5af2-ae80-4f39-ac6f-c2dbc2e8b820	906935a6-9e29-4146-a7a0-d60f2507e774	g.chr17:72588326A>C	uc002jla.1	+	3	503	c.141A>C	c.(139-141)AGA>AGC	p.R47S	CD300LD_uc002jkz.2_Missense_Mutation_p.S6A	NM_152460	NP_689673	Q96MU5	CQ077_HUMAN	hypothetical protein LOC146723	47						extracellular region					0						AGCAGCAGAGATGGGGACAGC	0.562													4	57	---	---	---	---	PASS
MOCOS	55034	broad.mit.edu	37	18	33795858	33795858	+	Missense_Mutation	SNP	C	A	A			TCGA-G9-6373-01A-11D-1786-08	TCGA-G9-6373-10A-01D-1786-08									Somatic	Phase_I	Capture				Illumina GAIIx	0caf5af2-ae80-4f39-ac6f-c2dbc2e8b820	906935a6-9e29-4146-a7a0-d60f2507e774	g.chr18:33795858C>A	uc002kzq.3	+	8	1738	c.1715C>A	c.(1714-1716)GCA>GAA	p.A572E		NM_017947	NP_060417	Q96EN8	MOCOS_HUMAN	molybdenum cofactor sulfurase	572					Mo-molybdopterin cofactor biosynthetic process|water-soluble vitamin metabolic process	cytosol	lyase activity|Mo-molybdopterin cofactor sulfurase activity|molybdenum ion binding|pyridoxal phosphate binding			skin(1)	1					Pyridoxal Phosphate(DB00114)	GAGAAAGCTGCAGGAGTCCTG	0.522													3	29	---	---	---	---	PASS
FCGBP	8857	broad.mit.edu	37	19	40367908	40367908	+	Missense_Mutation	SNP	G	A	A	rs73558346	byFrequency	TCGA-G9-6373-01A-11D-1786-08	TCGA-G9-6373-10A-01D-1786-08									Somatic	Phase_I	Capture				Illumina GAIIx	0caf5af2-ae80-4f39-ac6f-c2dbc2e8b820	906935a6-9e29-4146-a7a0-d60f2507e774	g.chr19:40367908G>A	uc002omp.3	-	29	13060	c.13052C>T	c.(13051-13053)ACC>ATC	p.T4351I		NM_003890	NP_003881	Q9Y6R7	FCGBP_HUMAN	Fc fragment of IgG binding protein precursor	4351						extracellular region	protein binding			ovary(4)|skin(4)|central_nervous_system(1)	9	all_cancers(60;6.03e-06)|all_lung(34;5.58e-08)|Lung NSC(34;6.62e-08)|Ovarian(47;0.06)		Epithelial(26;6.25e-23)|all cancers(26;1.13e-20)			TTCTGGGCAGGTGATCTCTGT	0.612													4	45	---	---	---	---	PASS
CYP2A6	1548	broad.mit.edu	37	19	41350672	41350672	+	Silent	SNP	G	A	A	rs59389036	byFrequency	TCGA-G9-6373-01A-11D-1786-08	TCGA-G9-6373-10A-01D-1786-08									Somatic	Phase_I	Capture				Illumina GAIIx	0caf5af2-ae80-4f39-ac6f-c2dbc2e8b820	906935a6-9e29-4146-a7a0-d60f2507e774	g.chr19:41350672G>A	uc002opl.3	-	8	1188	c.1167C>T	c.(1165-1167)ACC>ACT	p.T389T		NM_000762	NP_000753	P11509	CP2A6_HUMAN	cytochrome P450, family 2, subfamily A,	389					coumarin catabolic process|exogenous drug catabolic process|steroid metabolic process|xenobiotic metabolic process	endoplasmic reticulum membrane|microsome	aromatase activity|coumarin 7-hydroxylase activity|electron carrier activity|enzyme binding|heme binding			ovary(2)	2			LUSC - Lung squamous cell carcinoma(20;0.000219)|Lung(22;0.000959)		Chlorzoxazone(DB00356)|Diethylstilbestrol(DB00255)|Estradiol(DB00783)|Ethinyl Estradiol(DB00977)|Formoterol(DB00983)|Halothane(DB01159)|Letrozole(DB01006)|Methoxsalen(DB00553)|Metyrapone(DB01011)|Nicotine(DB00184)|Pilocarpine(DB01085)|Tolbutamide(DB01124)|Tranylcypromine(DB00752)	GGAACACTTCGGTGCCCTGGT	0.572													4	30	---	---	---	---	PASS
TPRX1	284355	broad.mit.edu	37	19	48305603	48305603	+	Missense_Mutation	SNP	G	A	A			TCGA-G9-6373-01A-11D-1786-08	TCGA-G9-6373-10A-01D-1786-08									Somatic	Phase_I	Capture				Illumina GAIIx	0caf5af2-ae80-4f39-ac6f-c2dbc2e8b820	906935a6-9e29-4146-a7a0-d60f2507e774	g.chr19:48305603G>A	uc002php.1	-	2	736	c.665C>T	c.(664-666)CCG>CTG	p.P222L		NM_198479	NP_940881	Q8N7U7	TPRX1_HUMAN	tetra-peptide repeat homeobox	222	Gly-rich.					nucleus	sequence-specific DNA binding|sequence-specific DNA binding transcription factor activity				0		all_cancers(25;3.02e-09)|all_epithelial(76;7e-07)|all_lung(116;2.48e-06)|Lung NSC(112;5.15e-06)|Ovarian(192;0.0139)|all_neural(266;0.0146)|Breast(70;0.133)		OV - Ovarian serous cystadenocarcinoma(262;0.000241)|all cancers(93;0.00036)|Epithelial(262;0.0127)|GBM - Glioblastoma multiforme(486;0.048)		gcctgggatcgggcctgggtt	0.000													2	2	---	---	---	---	PASS
GPR32	2854	broad.mit.edu	37	19	51273918	51273918	+	Missense_Mutation	SNP	C	T	T			TCGA-G9-6373-01A-11D-1786-08	TCGA-G9-6373-10A-01D-1786-08									Somatic	Phase_I	Capture				Illumina GAIIx	0caf5af2-ae80-4f39-ac6f-c2dbc2e8b820	906935a6-9e29-4146-a7a0-d60f2507e774	g.chr19:51273918C>T	uc010ycf.1	+	1	61	c.61C>T	c.(61-63)CGT>TGT	p.R21C		NM_001506	NP_001497	O75388	GPR32_HUMAN	G protein-coupled receptor 32	21	Extracellular (Potential).					integral to plasma membrane	N-formyl peptide receptor activity			upper_aerodigestive_tract(1)	1		all_neural(266;0.131)		OV - Ovarian serous cystadenocarcinoma(262;0.00641)|GBM - Glioblastoma multiforme(134;0.028)		GGTCCTGACACGTGATCGCTC	0.522													20	22	---	---	---	---	PASS
GSTT1	2952	broad.mit.edu	37	22	24384213	24384213	+	Silent	SNP	G	A	A			TCGA-G9-6373-01A-11D-1786-08	TCGA-G9-6373-10A-01D-1786-08									Somatic	Phase_I	Capture				Illumina GAIIx	0caf5af2-ae80-4f39-ac6f-c2dbc2e8b820	906935a6-9e29-4146-a7a0-d60f2507e774	g.chr22:24384213G>A	uc002zze.3	-	1	72	c.19C>T	c.(19-21)CTG>TTG	p.L7L	GSTT1_uc002zzf.3_RNA|GSTT1_uc010gug.2_RNA|GSTT1_uc011ajl.1_5'UTR|GSTT1_uc010guh.2_RNA|GSTT1_uc010gui.1_RNA	NM_000853	NP_000844	P30711	GSTT1_HUMAN	glutathione S-transferase theta 1	7	GST N-terminal.				glutathione metabolic process	cytosol|soluble fraction	glutathione peroxidase activity|glutathione transferase activity			ovary(1)	1					Glutathione(DB00143)	AGCAGGTCCAGGTACAGCTCC	0.587									Myelodysplasia_and_Acute_Myeloid_Leukemia_(AML)_Familial				31	66	---	---	---	---	PASS
KLHDC7B	113730	broad.mit.edu	37	22	50987891	50987891	+	Silent	SNP	G	A	A			TCGA-G9-6373-01A-11D-1786-08	TCGA-G9-6373-10A-01D-1786-08									Somatic	Phase_I	Capture				Illumina GAIIx	0caf5af2-ae80-4f39-ac6f-c2dbc2e8b820	906935a6-9e29-4146-a7a0-d60f2507e774	g.chr22:50987891G>A	uc003bmi.2	+	1	1430	c.1296G>A	c.(1294-1296)GCG>GCA	p.A432A		NM_138433	NP_612442	Q96G42	KLD7B_HUMAN	kelch domain containing 7B	432	Kelch 3.									central_nervous_system(1)	1		all_cancers(38;1.53e-10)|all_epithelial(38;1.82e-09)|Breast(42;0.000448)|all_lung(38;0.000665)|Lung NSC(38;0.0104)|Ovarian(80;0.104)|Lung SC(80;0.162)|Hepatocellular(38;0.178)		OV - Ovarian serous cystadenocarcinoma(4;7.49e-69)|all cancers(3;9.79e-66)|Epithelial(4;1.3e-63)|GBM - Glioblastoma multiforme(4;0.000399)|Lung(4;0.125)|BRCA - Breast invasive adenocarcinoma(115;0.205)|LUAD - Lung adenocarcinoma(64;0.247)		CCCCACGCGCGCCACTCCCCG	0.672													54	128	---	---	---	---	PASS
CXorf38	159013	broad.mit.edu	37	X	40506697	40506697	+	Silent	SNP	A	G	G	rs6610447	byFrequency	TCGA-G9-6373-01A-11D-1786-08	TCGA-G9-6373-10A-01D-1786-08									Somatic	Phase_I	Capture				Illumina GAIIx	0caf5af2-ae80-4f39-ac6f-c2dbc2e8b820	906935a6-9e29-4146-a7a0-d60f2507e774	g.chrX:40506697A>G	uc004dew.2	-	1	81	c.76T>C	c.(76-78)TTA>CTA	p.L26L	CXorf38_uc011mko.1_Silent_p.L26L|CXorf38_uc004dev.1_5'UTR|CXorf38_uc010nhd.2_RNA	NM_144970	NP_659407	Q8TB03	CX038_HUMAN	hypothetical protein LOC159013	26										ovary(1)	1						CGCAGCAGTAACAGGCAGTGG	0.687													4	36	---	---	---	---	PASS
Unknown	0	broad.mit.edu	37	X	48163105	48163105	+	Missense_Mutation	SNP	A	G	G	rs4598385	by1000genomes	TCGA-G9-6373-01A-11D-1786-08	TCGA-G9-6373-10A-01D-1786-08									Somatic	Phase_I	Capture				Illumina GAIIx	0caf5af2-ae80-4f39-ac6f-c2dbc2e8b820	906935a6-9e29-4146-a7a0-d60f2507e774	g.chrX:48163105A>G	uc010nib.1	-	4	301	c.214T>C	c.(214-216)TGT>CGT	p.C72R		NM_174962	NP_777622			synovial sarcoma, X breakpoint 9																		CCTGTATTACACATGAAAGGT	0.418													6	116	---	---	---	---	PASS
GPR112	139378	broad.mit.edu	37	X	135431236	135431236	+	Missense_Mutation	SNP	T	C	C	rs5930932	byFrequency	TCGA-G9-6373-01A-11D-1786-08	TCGA-G9-6373-10A-01D-1786-08									Somatic	Phase_I	Capture				Illumina GAIIx	0caf5af2-ae80-4f39-ac6f-c2dbc2e8b820	906935a6-9e29-4146-a7a0-d60f2507e774	g.chrX:135431236T>C	uc004ezu.1	+	6	5662	c.5371T>C	c.(5371-5373)TTT>CTT	p.F1791L	GPR112_uc010nsb.1_Missense_Mutation_p.F1586L|GPR112_uc010nsc.1_Missense_Mutation_p.F1558L	NM_153834	NP_722576	Q8IZF6	GP112_HUMAN	G-protein coupled receptor 112	1791	Extracellular (Potential).				neuropeptide signaling pathway	integral to membrane|plasma membrane	G-protein coupled receptor activity			ovary(5)|large_intestine(2)|skin(2)|lung(1)|breast(1)|pancreas(1)	12	Acute lymphoblastic leukemia(192;0.000127)					CACCAATTGCTTTTCTTCTAA	0.383													5	77	---	---	---	---	PASS
MLL3	58508	broad.mit.edu	37	7	151904428	151904429	+	Frame_Shift_Ins	INS	-	A	A			TCGA-G9-6373-01A-11D-1786-08	TCGA-G9-6373-10A-01D-1786-08									Somatic	Phase_I	Capture				Illumina GAIIx	0caf5af2-ae80-4f39-ac6f-c2dbc2e8b820	906935a6-9e29-4146-a7a0-d60f2507e774	g.chr7:151904428_151904429insA	uc003wla.2	-	24	4016_4017	c.3797_3798insT	c.(3796-3798)GGAfs	p.G1266fs	MLL3_uc003wkz.2_Frame_Shift_Ins_p.G327fs	NM_170606	NP_733751	Q8NEZ4	MLL3_HUMAN	myeloid/lymphoid or mixed-lineage leukemia 3	1266					intracellular signal transduction|regulation of transcription, DNA-dependent|transcription, DNA-dependent		DNA binding|protein binding|zinc ion binding			large_intestine(27)|pancreas(13)|ovary(9)|central_nervous_system(8)|breast(3)|upper_aerodigestive_tract(1)|urinary_tract(1)|skin(1)	63	all_neural(206;0.187)	all_hematologic(28;0.0592)|Prostate(32;0.0906)	OV - Ovarian serous cystadenocarcinoma(82;0.00715)	UCEC - Uterine corpus endometrioid carcinoma (81;0.0597)|BRCA - Breast invasive adenocarcinoma(188;0.0462)		CACCATCTGTTCCTTCCACTCC	0.381			N		medulloblastoma								51	28	---	---	---	---	
TTLL11	158135	broad.mit.edu	37	9	124855330	124855331	+	In_Frame_Ins	INS	-	TGGCCT	TGGCCT			TCGA-G9-6373-01A-11D-1786-08	TCGA-G9-6373-10A-01D-1786-08									Somatic	Phase_I	Capture				Illumina GAIIx	0caf5af2-ae80-4f39-ac6f-c2dbc2e8b820	906935a6-9e29-4146-a7a0-d60f2507e774	g.chr9:124855330_124855331insTGGCCT	uc004blt.1	-	1	555_556	c.367_368insAGGCCA	c.(367-369)ACA>AAGGCCACA	p.122_123insKA	TTLL11_uc011lyl.1_In_Frame_Ins_p.122_123insKA|TTLL11_uc004blr.2_RNA|TTLL11_uc004blu.1_In_Frame_Ins_p.122_123insKA	NM_194252	NP_919228	Q8NHH1	TTL11_HUMAN	tubulin tyrosine ligase-like family, member 11	122_123					protein modification process	cilium|microtubule basal body	tubulin-tyrosine ligase activity				0						cgtctccgctgtggcctcggcc	0.351													6	5	---	---	---	---	
