Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	Genome_Change	Annotation_Transcript	Transcript_Strand	Transcript_Exon	Transcript_Position	cDNA_Change	Codon_Change	Protein_Change	Other_Transcripts	Refseq_mRNA_Id	Refseq_prot_Id	SwissProt_acc_Id	SwissProt_entry_Id	Description	UniProt_AApos	UniProt_Region	UniProt_Site	UniProt_Natural_Variations	UniProt_Experimental_Info	GO_Biological_Process	GO_Cellular_Component	GO_Molecular_Function	COSMIC_overlapping_mutations	COSMIC_fusion_genes	COSMIC_tissue_types_affected	COSMIC_total_alterations_in_gene	Tumorscape_Amplification_Peaks	Tumorscape_Deletion_Peaks	TCGAscape_Amplification_Peaks	TCGAscape_Deletion_Peaks	DrugBank	ref_context	gc_content	CCLE_ONCOMAP_overlapping_mutations	CCLE_ONCOMAP_total_mutations_in_gene	CGC_Mutation_Type	CGC_Translocation_Partner	CGC_Tumor_Types_Somatic	CGC_Tumor_Types_Germline	CGC_Other_Diseases	DNARepairGenes_Role	FamilialCancerDatabase_Syndromes	MUTSIG_Published_Results	OREGANNO_ID	OREGANNO_Values	t_alt_count	t_ref_count	validation_status	validation_method	validation_tumor_sample	validation_alt_allele	pox	qox	pox_cutoff	isArtifactMode	oxoGCut
CROCC	9696	broad.mit.edu	37	1	17272075	17272075	+	Missense_Mutation	SNP	G	A	A	rs2781608	by1000genomes	TCGA-DW-7839-01A-11D-2136-08	TCGA-DW-7839-10A-01D-2136-08									Somatic	Phase_I	Capture				Illumina GAIIx	d305b7d5-cbb1-41bf-8b2b-1cc2ba653c20	59a27c03-2a9d-4978-81e0-94d09e0e5d43	g.chr1:17272075G>A	uc001azt.2	+	15	2179	c.2110G>A	c.(2110-2112)GCC>ACC	p.A704T	CROCC_uc009voz.1_Missense_Mutation_p.A467T|CROCC_uc001azu.2_Missense_Mutation_p.A7T	NM_014675	NP_055490	Q5TZA2	CROCC_HUMAN	ciliary rootlet coiled-coil	704	Potential.				cell cycle|cell projection organization|centrosome organization|protein localization	actin cytoskeleton|centriole|ciliary rootlet|plasma membrane	kinesin binding|structural molecule activity			ovary(2)|breast(2)|central_nervous_system(1)	5		Colorectal(325;3.46e-05)|Breast(348;0.000162)|Lung NSC(340;0.000174)|all_lung(284;0.000234)|Renal(390;0.000518)|Ovarian(437;0.00669)|Myeloproliferative disorder(586;0.0255)		UCEC - Uterine corpus endometrioid carcinoma (279;0.00459)|BRCA - Breast invasive adenocarcinoma(304;7.63e-06)|COAD - Colon adenocarcinoma(227;1.07e-05)|Kidney(64;0.000163)|KIRC - Kidney renal clear cell carcinoma(64;0.00258)|STAD - Stomach adenocarcinoma(196;0.00644)|READ - Rectum adenocarcinoma(331;0.0649)|Lung(427;0.181)		GGCCGAGAAGGCCGAGGTGGC	0.657000													3	17					0	0	0.009096	0	0
CR1L	1379	broad.mit.edu	37	1	207818592	207818592	+	Missense_Mutation	SNP	T	G	G			TCGA-DW-7839-01A-11D-2136-08	TCGA-DW-7839-10A-01D-2136-08									Somatic	Phase_I	Capture				Illumina GAIIx	d305b7d5-cbb1-41bf-8b2b-1cc2ba653c20	59a27c03-2a9d-4978-81e0-94d09e0e5d43	g.chr1:207818592T>G	uc001hga.3	+	1	135	c.14T>G	c.(13-15)GTC>GGC	p.V5G	CR1L_uc001hfz.2_RNA	NM_175710	NP_783641	Q2VPA4	CR1L_HUMAN	complement component (3b/4b) receptor 1-like	5						cytoplasm|extracellular region|membrane					0						GCGCCTCCCGTCCGTCTCGAG	0.657000													52	54					0	0	0.048971	0	0
ATF3	467	broad.mit.edu	37	1	212791490	212791490	+	Missense_Mutation	SNP	A	G	G			TCGA-DW-7839-01A-11D-2136-08	TCGA-DW-7839-10A-01D-2136-08									Somatic	Phase_I	Capture				Illumina GAIIx	d305b7d5-cbb1-41bf-8b2b-1cc2ba653c20	59a27c03-2a9d-4978-81e0-94d09e0e5d43	g.chr1:212791490A>G	uc001hjf.2	+	3	395	c.262A>G	c.(262-264)AGG>GGG	p.R88G	ATF3_uc001hjj.2_Missense_Mutation_p.R88G|ATF3_uc009xdg.1_Intron|ATF3_uc001hjh.2_Missense_Mutation_p.R88G|ATF3_uc001hji.2_Missense_Mutation_p.R88G|ATF3_uc010ptg.1_RNA	NM_001030287	NP_001025458	P18847	ATF3_HUMAN	activating transcription factor 3 isoform 1	88	Basic motif.					nucleolus	identical protein binding|protein dimerization activity|sequence-specific DNA binding|sequence-specific DNA binding transcription factor activity|transcription corepressor activity				0				OV - Ovarian serous cystadenocarcinoma(81;0.00628)|all cancers(67;0.0097)|GBM - Glioblastoma multiforme(131;0.0388)|Epithelial(68;0.0933)		AGAAGATGAAAGGAAAAAGAG	0.438000													43	38					0	0	0.098360	0	0
C1orf35	79169	broad.mit.edu	37	1	228290925	228290925	+	Missense_Mutation	SNP	A	C	C			TCGA-DW-7839-01A-11D-2136-08	TCGA-DW-7839-10A-01D-2136-08									Somatic	Phase_I	Capture				Illumina GAIIx	d305b7d5-cbb1-41bf-8b2b-1cc2ba653c20	59a27c03-2a9d-4978-81e0-94d09e0e5d43	g.chr1:228290925A>C	uc001hrx.2	-	1	98	c.4T>G	c.(4-6)TTC>GTC	p.F2V	C1orf35_uc009xew.2_RNA	NM_024319	NP_077295	Q9BU76	MMTA2_HUMAN	hypothetical protein LOC79169	2											0		Prostate(94;0.0488)				CTGGAGCCGAACATGGCGCCG	0.682000													27	17					0	0	0.099896	0	0
CUBN	8029	broad.mit.edu	37	10	16943441	16943441	+	Missense_Mutation	SNP	T	C	C			TCGA-DW-7839-01A-11D-2136-08	TCGA-DW-7839-10A-01D-2136-08									Somatic	Phase_I	Capture				Illumina GAIIx	d305b7d5-cbb1-41bf-8b2b-1cc2ba653c20	59a27c03-2a9d-4978-81e0-94d09e0e5d43	g.chr10:16943441T>C	uc001ioo.2	-	52	8132	c.8080A>G	c.(8080-8082)ATA>GTA	p.I2694V	CUBN_uc009xjq.1_RNA|CUBN_uc009xjr.1_Missense_Mutation_p.I50V	NM_001081	NP_001072	O60494	CUBN_HUMAN	cubilin precursor	2694	CUB 20.				cholesterol metabolic process|cobalamin transport|hormone biosynthetic process|lipoprotein metabolic process|receptor-mediated endocytosis|tissue homeostasis|vitamin D metabolic process	brush border membrane|cytosol|endosome membrane|extrinsic to external side of plasma membrane|lysosomal lumen|lysosomal membrane	calcium ion binding|cobalamin binding|protein homodimerization activity|receptor activity|transporter activity			ovary(9)|breast(4)|pancreas(2)|upper_aerodigestive_tract(1)|large_intestine(1)|central_nervous_system(1)|kidney(1)	19					Cyanocobalamin(DB00115)|Hydroxocobalamin(DB00200)	CTGTCACCTATCTGTATTCCG	0.443000													47	38					0	0	0.048971	0	0
NRG3	10718	broad.mit.edu	37	10	83635770	83635770	+	Missense_Mutation	SNP	C	A	A			TCGA-DW-7839-01A-11D-2136-08	TCGA-DW-7839-10A-01D-2136-08									Somatic	Phase_I	Capture				Illumina GAIIx	d305b7d5-cbb1-41bf-8b2b-1cc2ba653c20	59a27c03-2a9d-4978-81e0-94d09e0e5d43	g.chr10:83635770C>A	uc001kco.2	+	1	701	c.674C>A	c.(673-675)CCT>CAT	p.P225H	NRG3_uc010qlz.1_Missense_Mutation_p.P225H|NRG3_uc001kcp.2_5'Flank|NRG3_uc001kcq.2_5'Flank	NM_001010848	NP_001010848	P56975	NRG3_HUMAN	neuregulin 3 isoform 1	225	Ser/Thr-rich.|Extracellular (Potential).				regulation of cell growth	extracellular region|integral to plasma membrane	growth factor activity|receptor tyrosine kinase binding|transmembrane receptor protein tyrosine kinase activator activity			lung(5)|breast(1)	6				GBM - Glioblastoma multiforme(1;2.5e-18)|all cancers(1;2.85e-09)		CCCTCCTGGCCTACTGCGGCA	0.557000													23	24					7.92952e-12	8.95269e-12	0.091800	1	0
EPS8L2	64787	broad.mit.edu	37	11	723296	723296	+	Nonsense_Mutation	SNP	C	A	A	rs142895363	by1000genomes	TCGA-DW-7839-01A-11D-2136-08	TCGA-DW-7839-10A-01D-2136-08									Somatic	Phase_I	Capture				Illumina GAIIx	d305b7d5-cbb1-41bf-8b2b-1cc2ba653c20	59a27c03-2a9d-4978-81e0-94d09e0e5d43	g.chr11:723296C>A	uc001lqt.2	+	15	1644	c.1397C>A	c.(1396-1398)TCA>TAA	p.S466*	EPS8L2_uc001lqu.2_Nonsense_Mutation_p.S466*|EPS8L2_uc010qwk.1_Nonsense_Mutation_p.S482*|EPS8L2_uc001lqv.2_Nonsense_Mutation_p.S421*|EPS8L2_uc001lqw.2_Nonsense_Mutation_p.S78*|EPS8L2_uc001lqx.2_Nonsense_Mutation_p.S78*|EPS8L2_uc001lqy.2_5'Flank	NM_022772	NP_073609	Q9H6S3	ES8L2_HUMAN	epidermal growth factor receptor pathway	466						cytoplasm				pancreas(1)	1		all_cancers(49;1.24e-08)|all_epithelial(84;1.87e-05)|Breast(177;0.000286)|Ovarian(85;0.000953)|Medulloblastoma(188;0.0109)|all_neural(188;0.0299)|Lung NSC(207;0.106)|all_lung(207;0.136)		all cancers(45;4.37e-27)|Epithelial(43;2.81e-26)|OV - Ovarian serous cystadenocarcinoma(40;1.33e-20)|BRCA - Breast invasive adenocarcinoma(625;4.29e-05)|Lung(200;0.0582)|LUSC - Lung squamous cell carcinoma(625;0.0703)		AGCCCCACTTCAGAGCCCACC	0.602000											OREG0020659	type=REGULATORY REGION|TFbs=CTCF|Dataset=CTCF ChIP-chip sites (Ren lab)|EvidenceSubtype=ChIP-on-chip (ChIP-chip)	44	59					7.77372e-23	8.92067e-23	0.048971	1	0
SPRYD5	84767	broad.mit.edu	37	11	55658774	55658774	+	Missense_Mutation	SNP	A	G	G			TCGA-DW-7839-01A-11D-2136-08	TCGA-DW-7839-10A-01D-2136-08									Somatic	Phase_I	Capture				Illumina GAIIx	d305b7d5-cbb1-41bf-8b2b-1cc2ba653c20	59a27c03-2a9d-4978-81e0-94d09e0e5d43	g.chr11:55658774A>G	uc010rip.1	+	7	1117	c.1025A>G	c.(1024-1026)TAT>TGT	p.Y342C	SPRYD5_uc010riq.1_Missense_Mutation_p.Y199C	NM_032681	NP_116070	Q9BSJ1	SPRY5_HUMAN	SPRY domain containing 5	342	B30.2/SPRY.					intracellular	zinc ion binding				0		all_epithelial(135;0.226)				GGCAAATATTATTGGGAGGTT	0.423000													50	65					0	0	0.048971	0	0
B3GNT1	11041	broad.mit.edu	37	11	66114291	66114291	+	Missense_Mutation	SNP	T	A	A			TCGA-DW-7839-01A-11D-2136-08	TCGA-DW-7839-10A-01D-2136-08									Somatic	Phase_I	Capture				Illumina GAIIx	d305b7d5-cbb1-41bf-8b2b-1cc2ba653c20	59a27c03-2a9d-4978-81e0-94d09e0e5d43	g.chr11:66114291T>A	uc001ohr.2	-	1	871	c.726A>T	c.(724-726)GAA>GAT	p.E242D	BRMS1_uc001ohp.1_5'Flank|BRMS1_uc001oho.1_5'Flank	NM_006876	NP_006867	O43505	B3GN1_HUMAN	UDP-GlcNAc:betaGal	242	Lumenal (Potential).				poly-N-acetyllactosamine biosynthetic process	integral to Golgi membrane	N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase activity				0						GATCCAGCATTTCCCGCAGGC	0.612000													68	69					0	0	0.048971	0	0
PICALM	8301	broad.mit.edu	37	11	85722090	85722090	+	Missense_Mutation	SNP	A	G	G			TCGA-DW-7839-01A-11D-2136-08	TCGA-DW-7839-10A-01D-2136-08									Somatic	Phase_I	Capture				Illumina GAIIx	d305b7d5-cbb1-41bf-8b2b-1cc2ba653c20	59a27c03-2a9d-4978-81e0-94d09e0e5d43	g.chr11:85722090A>G	uc001pbm.2	-	7	1034	c.748T>C	c.(748-750)TTC>CTC	p.F250L	PICALM_uc001pbl.2_Missense_Mutation_p.F250L|PICALM_uc001pbn.2_Missense_Mutation_p.F250L|PICALM_uc010rtl.1_Missense_Mutation_p.F199L	NM_007166	NP_009097	Q13492	PICAL_HUMAN	phosphatidylinositol-binding clathrin assembly	250					clathrin coat assembly|endosome transport|negative regulation of receptor-mediated endocytosis|positive regulation of transcription, DNA-dependent|receptor internalization|regulation of protein localization	clathrin coat|clathrin-coated vesicle|coated pit|Golgi apparatus|nucleus|postsynaptic membrane|presynaptic membrane	1-phosphatidylinositol binding|clathrin heavy chain binding			urinary_tract(1)|ovary(1)	2		Acute lymphoblastic leukemia(157;7.42e-07)|all_hematologic(158;0.00092)				ACTTTGAGGAACTCTGAGATT	0.343000			T	MLLT10|MLL	TALL|AML|								13	9					0	0	0.033300	0	0
FAT3	120114	broad.mit.edu	37	11	92590392	92590392	+	Missense_Mutation	SNP	C	T	T			TCGA-DW-7839-01A-11D-2136-08	TCGA-DW-7839-10A-01D-2136-08									Somatic	Phase_I	Capture				Illumina GAIIx	d305b7d5-cbb1-41bf-8b2b-1cc2ba653c20	59a27c03-2a9d-4978-81e0-94d09e0e5d43	g.chr11:92590392C>T	uc001pdj.3	+	19	11395	c.11378C>T	c.(11377-11379)CCG>CTG	p.P3793L	FAT3_uc001pdi.3_Missense_Mutation_p.P233L	NM_001008781	NP_001008781	Q8TDW7	FAT3_HUMAN	FAT tumor suppressor homolog 3	3793	Extracellular (Potential).				homophilic cell adhesion|multicellular organismal development	integral to membrane|plasma membrane	calcium ion binding			ovary(4)|pancreas(1)	5		Acute lymphoblastic leukemia(157;3.01e-05)|all_hematologic(158;0.00858)				GGACTGTGTCCGGGGTCCAAC	0.527000										TCGA Ovarian(4;0.039)			44	48					0	0	0.048971	0	0
PPFIBP1	8496	broad.mit.edu	37	12	27787953	27787953	+	Silent	SNP	T	C	C			TCGA-DW-7839-01A-11D-2136-08	TCGA-DW-7839-10A-01D-2136-08									Somatic	Phase_I	Capture				Illumina GAIIx	d305b7d5-cbb1-41bf-8b2b-1cc2ba653c20	59a27c03-2a9d-4978-81e0-94d09e0e5d43	g.chr12:27787953T>C	uc001ric.1	+	4	552	c.175T>C	c.(175-177)TTA>CTA	p.L59L	PPFIBP1_uc001rhy.1_Silent_p.L59L|PPFIBP1_uc001rhz.1_Silent_p.L59L|PPFIBP1_uc010sjr.1_Intron|PPFIBP1_uc001rib.1_Silent_p.L59L|PPFIBP1_uc001ria.2_Silent_p.L59L|PPFIBP1_uc001rid.1_Intron	NM_003622	NP_003613	Q86W92	LIPB1_HUMAN	PTPRF interacting protein binding protein 1	59					cell adhesion	plasma membrane	protein binding		PPFIBP1/ALK(3)	soft_tissue(3)|kidney(1)|skin(1)	5	Lung SC(9;0.0873)					GCGTGGATTGTTAGAGATGAT	0.458000													41	49					0	0	0.104719	0	0
ARF3	377	broad.mit.edu	37	12	49333834	49333834	+	Missense_Mutation	SNP	C	G	G			TCGA-DW-7839-01A-11D-2136-08	TCGA-DW-7839-10A-01D-2136-08									Somatic	Phase_I	Capture				Illumina GAIIx	d305b7d5-cbb1-41bf-8b2b-1cc2ba653c20	59a27c03-2a9d-4978-81e0-94d09e0e5d43	g.chr12:49333834C>G	uc001rsr.2	-	3	458	c.205G>C	c.(205-207)GGT>CGT	p.G69R	ARF3_uc010smc.1_Intron	NM_001659	NP_001650	P61204	ARF3_HUMAN	ADP-ribosylation factor 3	69	GTP (By similarity).				protein transport|small GTPase mediated signal transduction|vesicle-mediated transport	Golgi apparatus|perinuclear region of cytoplasm	GTP binding|GTPase activity				0						TCCTGGCCACCCACATCCCAC	0.502000													34	50					0	0	0.074837	0	0
MBD6	114785	broad.mit.edu	37	12	57920964	57920964	+	Missense_Mutation	SNP	C	T	T			TCGA-DW-7839-01A-11D-2136-08	TCGA-DW-7839-10A-01D-2136-08									Somatic	Phase_I	Capture				Illumina GAIIx	d305b7d5-cbb1-41bf-8b2b-1cc2ba653c20	59a27c03-2a9d-4978-81e0-94d09e0e5d43	g.chr12:57920964C>T	uc001soj.1	+	7	2260	c.2036C>T	c.(2035-2037)GCG>GTG	p.A679V	MBD6_uc001sok.1_Missense_Mutation_p.A546V|MBD6_uc001sol.1_RNA	NM_052897	NP_443129	Q96DN6	MBD6_HUMAN	methyl-CpG binding domain protein 6	679	Pro-rich.					chromosome|nucleus	chromatin binding|DNA binding			central_nervous_system(3)|ovary(1)	4						TTAAATTCTGCGCTGCTGGCT	0.597000													12	5					0	0	0.080935	0	0
MED13L	23389	broad.mit.edu	37	12	116429670	116429670	+	Missense_Mutation	SNP	G	C	C			TCGA-DW-7839-01A-11D-2136-08	TCGA-DW-7839-10A-01D-2136-08									Somatic	Phase_I	Capture				Illumina GAIIx	d305b7d5-cbb1-41bf-8b2b-1cc2ba653c20	59a27c03-2a9d-4978-81e0-94d09e0e5d43	g.chr12:116429670G>C	uc001tvw.2	-	17	3144	c.3089C>G	c.(3088-3090)GCC>GGC	p.A1030G		NM_015335	NP_056150	Q71F56	MD13L_HUMAN	mediator complex subunit 13-like	1030					regulation of transcription from RNA polymerase II promoter|transcription, DNA-dependent					skin(4)|ovary(2)|upper_aerodigestive_tract(1)|lung(1)	8	all_neural(191;0.117)|Medulloblastoma(191;0.163)			BRCA - Breast invasive adenocarcinoma(302;0.0407)		ACTATTGCTGGCTGGGGCAGC	0.572000													31	37					0	0	0.037714	0	0
STARD13	90627	broad.mit.edu	37	13	33700266	33700266	+	Missense_Mutation	SNP	T	G	G	rs143789881	byFrequency	TCGA-DW-7839-01A-11D-2136-08	TCGA-DW-7839-10A-01D-2136-08									Somatic	Phase_I	Capture				Illumina GAIIx	d305b7d5-cbb1-41bf-8b2b-1cc2ba653c20	59a27c03-2a9d-4978-81e0-94d09e0e5d43	g.chr13:33700266T>G	uc001uuw.2	-	7	2160	c.2034A>C	c.(2032-2034)CAA>CAC	p.Q678H	STARD13_uc001uuu.2_Missense_Mutation_p.Q670H|STARD13_uc001uuv.2_Missense_Mutation_p.Q560H|STARD13_uc001uux.2_Missense_Mutation_p.Q643H|STARD13_uc010tec.1_RNA	NM_178006	NP_821074	Q9Y3M8	STA13_HUMAN	StAR-related lipid transfer (START) domain	678	Rho-GAP.				regulation of small GTPase mediated signal transduction|small GTPase mediated signal transduction	cytosol|lipid particle|mitochondrial membrane	GTPase activator activity|protein binding			ovary(2)|pancreas(1)|skin(1)	4	all_epithelial(80;0.155)	Lung SC(185;0.0367)		all cancers(112;1.31e-05)|Epithelial(112;0.000142)|BRCA - Breast invasive adenocarcinoma(63;0.00936)|OV - Ovarian serous cystadenocarcinoma(117;0.0533)|Lung(94;0.143)|GBM - Glioblastoma multiforme(144;0.143)		GCTGAATACTTTGAGGCAGGG	0.542000													84	87					0	0	0.048971	0	0
SLC38A6	145389	broad.mit.edu	37	14	61449295	61449295	+	Missense_Mutation	SNP	A	C	C			TCGA-DW-7839-01A-11D-2136-08	TCGA-DW-7839-10A-01D-2136-08									Somatic	Phase_I	Capture				Illumina GAIIx	d305b7d5-cbb1-41bf-8b2b-1cc2ba653c20	59a27c03-2a9d-4978-81e0-94d09e0e5d43	g.chr14:61449295A>C	uc001xfg.1	+	2	291	c.175A>C	c.(175-177)ATG>CTG	p.M59L	SLC38A6_uc001xfh.1_Missense_Mutation_p.M59L|SLC38A6_uc001xfi.2_RNA|SLC38A6_uc001xfj.1_RNA|SLC38A6_uc001xfk.2_RNA|SLC38A6_uc010trz.1_Missense_Mutation_p.M36L|TRMT5_uc001xff.3_5'Flank	NM_153811	NP_722518	Q8IZM9	S38A6_HUMAN	solute carrier family 38, member 6	59	Helical; (Potential).				amino acid transport|sodium ion transport	integral to membrane				ovary(1)|central_nervous_system(1)|skin(1)	3				OV - Ovarian serous cystadenocarcinoma(108;0.0981)		GAATGCCATCATGGGAAGTGG	0.368000													44	48					0	0	0.111260	0	0
TJP1	7082	broad.mit.edu	37	15	30033565	30033565	+	Missense_Mutation	SNP	G	A	A			TCGA-DW-7839-01A-11D-2136-08	TCGA-DW-7839-10A-01D-2136-08									Somatic	Phase_I	Capture				Illumina GAIIx	d305b7d5-cbb1-41bf-8b2b-1cc2ba653c20	59a27c03-2a9d-4978-81e0-94d09e0e5d43	g.chr15:30033565G>A	uc001zcr.2	-	10	1701	c.1226C>T	c.(1225-1227)CCT>CTT	p.P409L	TJP1_uc010azl.2_Missense_Mutation_p.P397L|TJP1_uc001zcq.2_Missense_Mutation_p.P413L|TJP1_uc001zcs.2_Missense_Mutation_p.P409L	NM_003257	NP_003248	Q07157	ZO1_HUMAN	tight junction protein 1 isoform a	409				QPDVDLPVSPSDGVLPNSTHEDGI -> NQMWIYLSVHLMV SYLIQLMKMGF (in Ref. 1; AAA02891).	cell-cell junction assembly|cellular component disassembly involved in apoptosis	basolateral plasma membrane|cell-cell adherens junction|Golgi apparatus|tight junction				ovary(4)|central_nervous_system(1)|pancreas(1)	6		all_lung(180;7.48e-11)|Breast(32;0.000153)		all cancers(64;3.29e-10)|Epithelial(43;5.34e-09)|BRCA - Breast invasive adenocarcinoma(123;0.0034)|GBM - Glioblastoma multiforme(186;0.0139)|Lung(196;0.186)		AGTTGAATTAGGTAGGACACC	0.343000													3	57					0	0	0.014758	0	0
ADAD2	161931	broad.mit.edu	37	16	84228944	84228944	+	Missense_Mutation	SNP	T	A	A			TCGA-DW-7839-01A-11D-2136-08	TCGA-DW-7839-10A-01D-2136-08									Somatic	Phase_I	Capture				Illumina GAIIx	d305b7d5-cbb1-41bf-8b2b-1cc2ba653c20	59a27c03-2a9d-4978-81e0-94d09e0e5d43	g.chr16:84228944T>A	uc002fhr.2	+	5	890	c.776T>A	c.(775-777)CTG>CAG	p.L259Q	ADAD2_uc002fhq.2_Missense_Mutation_p.L341Q|uc002fhs.1_5'UTR	NM_001145400	NP_001138872	Q8NCV1	ADAD2_HUMAN	adenosine deaminase domain containing 2 isoform	259					RNA processing	intracellular	adenosine deaminase activity|double-stranded RNA binding				0						ATCTACAAGCTGGTGGCTCTG	0.677000													9	15					0	0	0.058154	0	0
SREBF1	6720	broad.mit.edu	37	17	17721579	17721579	+	Missense_Mutation	SNP	T	C	C			TCGA-DW-7839-01A-11D-2136-08	TCGA-DW-7839-10A-01D-2136-08									Somatic	Phase_I	Capture				Illumina GAIIx	d305b7d5-cbb1-41bf-8b2b-1cc2ba653c20	59a27c03-2a9d-4978-81e0-94d09e0e5d43	g.chr17:17721579T>C	uc002gru.1	-	6	1372	c.1178A>G	c.(1177-1179)AAA>AGA	p.K393R	SREBF1_uc002grp.1_5'UTR|SREBF1_uc002grq.1_5'UTR|SREBF1_uc002grr.1_Missense_Mutation_p.K139R|SREBF1_uc002grs.1_Missense_Mutation_p.K369R|SREBF1_uc002grt.1_Missense_Mutation_p.K423R|SREBF1_uc010cpp.1_Missense_Mutation_p.K369R|SREBF1_uc010cpq.1_Missense_Mutation_p.K393R	NM_004176	NP_004167	P36956	SRBP1_HUMAN	sterol regulatory element binding transcription	393	Interaction with LMNA (By similarity).|Cytoplasmic (Potential).|Leucine-zipper.				cellular response to starvation|cholesterol metabolic process|positive regulation of transcription from RNA polymerase II promoter|regulation of transcription from RNA polymerase II promoter	endoplasmic reticulum|endoplasmic reticulum membrane|ER to Golgi transport vesicle membrane|Golgi membrane|integral to membrane|nuclear envelope|nucleus	protein binding|protein binding|sequence-specific DNA binding transcription factor activity|sterol response element binding			skin(1)	1						CTCACTGCTTTTGTGGACAGC	0.313000													23	58					0	0	0.091800	0	0
ERBB2	2064	broad.mit.edu	37	17	37880219	37880220	+	Missense_Mutation	DNP	TT	CC	CC	rs121913470		TCGA-DW-7839-01A-11D-2136-08	TCGA-DW-7839-10A-01D-2136-08									Somatic	Phase_I	Capture				Illumina GAIIx	d305b7d5-cbb1-41bf-8b2b-1cc2ba653c20	59a27c03-2a9d-4978-81e0-94d09e0e5d43	g.chr17:37880219_37880220TT>CC	uc002hso.2	+	19	2501_2502	c.2263_2264TT>CC	c.(2263-2265)TTG>CCG	p.L755P	ERBB2_uc002hsm.2_Missense_Mutation_p.L725P|ERBB2_uc010cwa.2_Missense_Mutation_p.L740P|ERBB2_uc002hsp.2_Missense_Mutation_p.L558P|ERBB2_uc010cwb.2_Missense_Mutation_p.L755P|ERBB2_uc010wek.1_Missense_Mutation_p.L479P	NM_004448	NP_004439	P04626	ERBB2_HUMAN	erbB-2 isoform a	755	Cytoplasmic (Potential).|Protein kinase.		L -> P (in a lung adenocarcinoma sample; somatic mutation).		cell proliferation|heart development|phosphatidylinositol 3-kinase cascade|phosphatidylinositol-mediated signaling|positive regulation of cell adhesion|positive regulation of epithelial cell proliferation|positive regulation of MAP kinase activity|protein autophosphorylation|regulation of angiogenesis|regulation of microtubule-based process|regulation of transcription, DNA-dependent|transcription, DNA-dependent|wound healing	integral to membrane|nucleus|perinuclear region of cytoplasm|receptor complex	ATP binding|DNA binding|epidermal growth factor receptor activity|ErbB-3 class receptor binding|identical protein binding|protein C-terminus binding|protein heterodimerization activity|protein phosphatase binding|receptor signaling protein tyrosine kinase activity	p.L755S(4)|p.L755P(2)|p.L755_S760>A(1)		lung(73)|central_nervous_system(16)|ovary(16)|stomach(14)|breast(9)|upper_aerodigestive_tract(5)|large_intestine(3)|liver(3)|endometrium(2)|skin(1)|pancreas(1)	143	all_cancers(6;1.06e-93)|all_epithelial(6;2.33e-113)|Breast(7;9.37e-100)|Lung NSC(9;9.76e-10)|all_lung(9;5.34e-09)|Colorectal(19;0.000442)|Esophageal squamous(10;0.052)	Ovarian(249;0.0547)|Colorectal(1115;0.234)	UCEC - Uterine corpus endometrioid carcinoma (11;0.000126)|Epithelial(3;9.42e-64)|all cancers(3;5.61e-57)|BRCA - Breast invasive adenocarcinoma(8;2.5e-45)|STAD - Stomach adenocarcinoma(3;9.03e-13)|Colorectal(5;6.23e-08)|COAD - Colon adenocarcinoma(5;8.58e-06)|Lung(15;0.00193)|LUAD - Lung adenocarcinoma(14;0.0664)|OV - Ovarian serous cystadenocarcinoma(8;0.0917)|LUSC - Lung squamous cell carcinoma(15;0.171)	UCEC - Uterine corpus endometrioid carcinoma (308;0.0767)	Lapatinib(DB01259)|Letrozole(DB01006)|Trastuzumab(DB00072)	CATCAAAGTGTTGAGGGAAAAC	0.530000	L755S(LN229_CENTRAL_NERVOUS_SYSTEM)	1	A|Mis|O		breast|ovarian|other tumour types|NSCLC|gastric					TCGA GBM(5;<1E-08)			39	22					0	0	0.004672	0	0
KRTAP2-1	81872	broad.mit.edu	37	17	39203187	39203187	+	Silent	SNP	G	A	A			TCGA-DW-7839-01A-11D-2136-08	TCGA-DW-7839-10A-01D-2136-08									Somatic	Phase_I	Capture				Illumina GAIIx	d305b7d5-cbb1-41bf-8b2b-1cc2ba653c20	59a27c03-2a9d-4978-81e0-94d09e0e5d43	g.chr17:39203187G>A	uc010cxi.2	-	1	382	c.333C>T	c.(331-333)CCC>CCT	p.P111P		NM_001123387	NP_001116859	Q9BYU5	KRA21_HUMAN	keratin associated protein KRTAP2.1A	111	10 X 5 AA repeats of C-C-[CDPQRWG]- [APRS]-[CIPSTVD].					keratin filament					0						GGCCGCAGGGGGGCCGGCAGC	0.716000													3	6					0	0	0.004672	0	0
CYP2A6	1548	broad.mit.edu	37	19	41352945	41352945	+	Missense_Mutation	SNP	C	T	T			TCGA-DW-7839-01A-11D-2136-08	TCGA-DW-7839-10A-01D-2136-08									Somatic	Phase_I	Capture				Illumina GAIIx	d305b7d5-cbb1-41bf-8b2b-1cc2ba653c20	59a27c03-2a9d-4978-81e0-94d09e0e5d43	g.chr19:41352945C>T	uc002opl.3	-	5	687	c.666G>A	c.(664-666)ATG>ATA	p.M222I	CYP2A6_uc010ehe.1_Missense_Mutation_p.M18I|CYP2A6_uc010ehf.1_RNA	NM_000762	NP_000753	P11509	CP2A6_HUMAN	cytochrome P450, family 2, subfamily A,	222					coumarin catabolic process|exogenous drug catabolic process|steroid metabolic process|xenobiotic metabolic process	endoplasmic reticulum membrane|microsome	aromatase activity|coumarin 7-hydroxylase activity|electron carrier activity|enzyme binding|heme binding			ovary(2)	2			LUSC - Lung squamous cell carcinoma(20;0.000219)|Lung(22;0.000959)		Chlorzoxazone(DB00356)|Diethylstilbestrol(DB00255)|Estradiol(DB00783)|Ethinyl Estradiol(DB00977)|Formoterol(DB00983)|Halothane(DB01159)|Letrozole(DB01006)|Methoxsalen(DB00553)|Metyrapone(DB01011)|Nicotine(DB00184)|Pilocarpine(DB01085)|Tolbutamide(DB01124)|Tranylcypromine(DB00752)	CCGAAGAGAACATCTCATAGA	0.537000													19	63					0	0	0.076483	0	0
CYP2A7	1549	broad.mit.edu	37	19	41384830	41384830	+	Missense_Mutation	SNP	C	T	T			TCGA-DW-7839-01A-11D-2136-08	TCGA-DW-7839-10A-01D-2136-08									Somatic	Phase_I	Capture				Illumina GAIIx	d305b7d5-cbb1-41bf-8b2b-1cc2ba653c20	59a27c03-2a9d-4978-81e0-94d09e0e5d43	g.chr19:41384830C>T	uc002opm.2	-	5	1208	c.666G>A	c.(664-666)ATG>ATA	p.M222I	CYP2A7_uc002opo.2_Missense_Mutation_p.M222I|CYP2A7_uc002opn.2_Missense_Mutation_p.M171I	NM_000764	NP_000755	P20853	CP2A7_HUMAN	cytochrome P450, family 2, subfamily A,	222						endoplasmic reticulum membrane|microsome	aromatase activity|electron carrier activity|heme binding|oxygen binding			ovary(1)|haematopoietic_and_lymphoid_tissue(1)|skin(1)	3			LUSC - Lung squamous cell carcinoma(20;0.000219)|Lung(22;0.000959)			CCGAAGAGAACATCTCATAGA	0.532000													7	40					0	0	0.047766	0	0
DMPK	1760	broad.mit.edu	37	19	46281110	46281110	+	Missense_Mutation	SNP	C	T	T			TCGA-DW-7839-01A-11D-2136-08	TCGA-DW-7839-10A-01D-2136-08									Somatic	Phase_I	Capture				Illumina GAIIx	d305b7d5-cbb1-41bf-8b2b-1cc2ba653c20	59a27c03-2a9d-4978-81e0-94d09e0e5d43	g.chr19:46281110C>T	uc002pdd.1	-	6	1271	c.727G>A	c.(727-729)GGC>AGC	p.G243S	DMPK_uc010xxs.1_Missense_Mutation_p.G144S|DMPK_uc002pde.1_Missense_Mutation_p.G243S|DMPK_uc002pdf.1_Missense_Mutation_p.G233S|DMPK_uc002pdg.1_Missense_Mutation_p.G233S|DMPK_uc002pdh.1_Missense_Mutation_p.G233S|DMPK_uc002pdi.1_Missense_Mutation_p.G259S|DMPK_uc010xxt.1_Missense_Mutation_p.G233S	NM_001081563	NP_001075032	Q09013	DMPK_HUMAN	myotonic dystrophy protein kinase isoform 1	243	Protein kinase.				regulation of heart contraction		ATP binding|metal ion binding|protein binding|protein serine/threonine kinase activity			lung(3)	3		Ovarian(192;0.0308)|all_neural(266;0.112)		OV - Ovarian serous cystadenocarcinoma(262;0.00616)|GBM - Glioblastoma multiforme(486;0.0825)|Epithelial(262;0.24)		TCTGGGGTGCCCACAGCCACC	0.692000													37	48					0	0	0.086207	0	0
NLRP2	55655	broad.mit.edu	37	19	55494859	55494859	+	Missense_Mutation	SNP	C	T	T			TCGA-DW-7839-01A-11D-2136-08	TCGA-DW-7839-10A-01D-2136-08									Somatic	Phase_I	Capture				Illumina GAIIx	d305b7d5-cbb1-41bf-8b2b-1cc2ba653c20	59a27c03-2a9d-4978-81e0-94d09e0e5d43	g.chr19:55494859C>T	uc002qij.2	+	6	1879	c.1793C>T	c.(1792-1794)ACG>ATG	p.T598M	NLRP2_uc010yfp.1_Missense_Mutation_p.T575M|NLRP2_uc010esn.2_Missense_Mutation_p.T574M|NLRP2_uc010eso.2_Missense_Mutation_p.T595M|NLRP2_uc010esp.2_Missense_Mutation_p.T576M	NM_017852	NP_060322	Q9NX02	NALP2_HUMAN	NLR family, pyrin domain containing 2	598					apoptosis|positive regulation of caspase activity|positive regulation of interleukin-1 beta secretion	cytoplasm	ATP binding|Pyrin domain binding			ovary(1)|skin(1)	2			BRCA - Breast invasive adenocarcinoma(297;0.163)	GBM - Glioblastoma multiforme(193;0.028)		GGACATTCAACGGTGACAGAC	0.537000													33	41					0	0	0.069456	0	0
ALMS1	7840	broad.mit.edu	37	2	73827935	73827935	+	Silent	SNP	T	C	C			TCGA-DW-7839-01A-11D-2136-08	TCGA-DW-7839-10A-01D-2136-08									Somatic	Phase_I	Capture				Illumina GAIIx	d305b7d5-cbb1-41bf-8b2b-1cc2ba653c20	59a27c03-2a9d-4978-81e0-94d09e0e5d43	g.chr2:73827935T>C	uc002sje.1	+	20	11913	c.11802T>C	c.(11800-11802)CGT>CGC	p.R3934R	ALMS1_uc002sjf.1_Silent_p.R3890R|ALMS1_uc002sjh.1_Silent_p.R3320R	NM_015120	NP_055935	Q8TCU4	ALMS1_HUMAN	Alstrom syndrome 1	3932					G2/M transition of mitotic cell cycle	centrosome|cilium|cytosol|microtubule basal body|spindle pole				skin(3)|ovary(2)|breast(2)|pancreas(1)|lung(1)	9						AAGAAAAACGTGAAGAGAAAA	0.408000													23	23					0	0	0.099896	0	0
SPAG16	79582	broad.mit.edu	37	2	214161997	214161997	+	Missense_Mutation	SNP	C	G	G			TCGA-DW-7839-01A-11D-2136-08	TCGA-DW-7839-10A-01D-2136-08									Somatic	Phase_I	Capture				Illumina GAIIx	d305b7d5-cbb1-41bf-8b2b-1cc2ba653c20	59a27c03-2a9d-4978-81e0-94d09e0e5d43	g.chr2:214161997C>G	uc002veq.2	+	3	287	c.195C>G	c.(193-195)GAC>GAG	p.D65E	SPAG16_uc010fuz.1_Missense_Mutation_p.T2R|SPAG16_uc002ver.2_Missense_Mutation_p.D11E|SPAG16_uc010zjk.1_Missense_Mutation_p.T11R|SPAG16_uc002veo.2_Missense_Mutation_p.D65E|SPAG16_uc002vep.1_Missense_Mutation_p.D65E|SPAG16_uc002ves.1_Missense_Mutation_p.D34E	NM_024532	NP_078808	Q8N0X2	SPG16_HUMAN	sperm associated antigen 16 isoform 1	65					cilium assembly	cilium axoneme|flagellar axoneme				ovary(1)|skin(1)	2		Renal(323;0.00461)		UCEC - Uterine corpus endometrioid carcinoma (47;0.0525)|Epithelial(149;7.07e-07)|all cancers(144;7.96e-05)|Lung(261;0.00255)|LUSC - Lung squamous cell carcinoma(224;0.00599)		TACCAGATGACAATTTTAGCA	0.358000													34	51					0	0	0.054565	0	0
SNX5	27131	broad.mit.edu	37	20	17933351	17933351	+	Missense_Mutation	SNP	C	G	G			TCGA-DW-7839-01A-11D-2136-08	TCGA-DW-7839-10A-01D-2136-08									Somatic	Phase_I	Capture				Illumina GAIIx	d305b7d5-cbb1-41bf-8b2b-1cc2ba653c20	59a27c03-2a9d-4978-81e0-94d09e0e5d43	g.chr20:17933351C>G	uc002wqc.2	-	5	479	c.393G>C	c.(391-393)GAG>GAC	p.E131D	SNX5_uc002wqb.2_RNA|SNX5_uc002wqd.2_Missense_Mutation_p.E131D|SNX5_uc002wqe.2_Missense_Mutation_p.E26D|SNX5_uc010zrt.1_Missense_Mutation_p.E131D	NM_014426	NP_055241	Q9Y5X3	SNX5_HUMAN	sorting nexin 5	131	PX.				cell communication|pinocytosis|protein transport	cytoplasmic vesicle membrane|early endosome membrane|extrinsic to endosome membrane|extrinsic to internal side of plasma membrane|macropinocytic cup|phagocytic cup|ruffle	phosphatidylinositol binding			large_intestine(1)	1						CAGCGAGATACTCACTGAAAA	0.453000													14	17					0	0	0.020292	0	0
FRG1B	284802	broad.mit.edu	37	20	29625877	29625877	+	Missense_Mutation	SNP	G	A	A	rs7266938	by1000genomes	TCGA-DW-7839-01A-11D-2136-08	TCGA-DW-7839-10A-01D-2136-08									Somatic	Phase_I	Capture				Illumina GAIIx	d305b7d5-cbb1-41bf-8b2b-1cc2ba653c20	59a27c03-2a9d-4978-81e0-94d09e0e5d43	g.chr20:29625877G>A	uc010ztl.1	+	2	63	c.31G>A	c.(31-33)GCC>ACC	p.A11T	FRG1B_uc002wvm.1_RNA|FRG1B_uc010ztj.1_RNA|FRG1B_uc010gdr.1_RNA|FRG1B_uc010ztk.1_Intron					Homo sapiens cDNA FLJ32537 fis, clone SMINT2000400, highly similar to Homo sapiens FRG1 mRNA.												0						GTACAGAATCGCCCTGAAATC	0.353000													6	83					0	0	0.038147	0	0
YTHDF1	54915	broad.mit.edu	37	20	61833643	61833643	+	Missense_Mutation	SNP	C	T	T			TCGA-DW-7839-01A-11D-2136-08	TCGA-DW-7839-10A-01D-2136-08									Somatic	Phase_I	Capture				Illumina GAIIx	d305b7d5-cbb1-41bf-8b2b-1cc2ba653c20	59a27c03-2a9d-4978-81e0-94d09e0e5d43	g.chr20:61833643C>T	uc002yeh.2	-	4	1943	c.1649G>A	c.(1648-1650)CGC>CAC	p.R550H	YTHDF1_uc011aaq.1_Missense_Mutation_p.R500H	NM_017798	NP_060268	Q9BYJ9	YTHD1_HUMAN	YTH domain family, member 1	550										ovary(2)	2						CCTCACCTTGCGCACCACCTC	0.567000													5	108					0	0	0.021553	0	0
ANKRD54	129138	broad.mit.edu	37	22	38240305	38240305	+	Splice_Site	SNP	T	G	G			TCGA-DW-7839-01A-11D-2136-08	TCGA-DW-7839-10A-01D-2136-08									Somatic	Phase_I	Capture				Illumina GAIIx	d305b7d5-cbb1-41bf-8b2b-1cc2ba653c20	59a27c03-2a9d-4978-81e0-94d09e0e5d43	g.chr22:38240305T>G	uc003auc.2	-	1	1	c.-57_splice	c.e1-1		ANKRD54_uc003aud.2_Splice_Site|MIR658_hsa-mir-658|MI0003682_RNA	NM_138797	NP_620152	Q6NXT1	ANR54_HUMAN	ankyrin repeat domain 54												0	Melanoma(58;0.045)					CCAACGGACCTACTTCCCTCC	0.756000													8	15					0	0	0.038147	0	0
XRN1	54464	broad.mit.edu	37	3	142141567	142141567	+	Missense_Mutation	SNP	A	T	T			TCGA-DW-7839-01A-11D-2136-08	TCGA-DW-7839-10A-01D-2136-08									Somatic	Phase_I	Capture				Illumina GAIIx	d305b7d5-cbb1-41bf-8b2b-1cc2ba653c20	59a27c03-2a9d-4978-81e0-94d09e0e5d43	g.chr3:142141567A>T	uc003eus.2	-	8	891	c.824T>A	c.(823-825)ATT>AAT	p.I275N	XRN1_uc003eut.2_Missense_Mutation_p.I275N|XRN1_uc003euu.2_Missense_Mutation_p.I275N|XRN1_uc003euv.1_Missense_Mutation_p.I136N|XRN1_uc003euw.2_Missense_Mutation_p.I275N|XRN1_uc011bnh.1_Missense_Mutation_p.I65N	NM_019001	NP_061874	Q8IZH2	XRN1_HUMAN	5'-3' exoribonuclease 1 isoform a	275					exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay|histone mRNA catabolic process|nuclear mRNA surveillance|rRNA catabolic process	cytosol|Golgi apparatus|intermediate filament cytoskeleton|plasma membrane	5'-3' exonuclease activity|DNA binding|protein binding|RNA binding			ovary(3)	3						TATCCTTTCAATATCATATTT	0.323000													26	34					0	0	0.091800	0	0
SLBP	7884	broad.mit.edu	37	4	1701385	1701385	+	Missense_Mutation	SNP	C	G	G			TCGA-DW-7839-01A-11D-2136-08	TCGA-DW-7839-10A-01D-2136-08									Somatic	Phase_I	Capture				Illumina GAIIx	d305b7d5-cbb1-41bf-8b2b-1cc2ba653c20	59a27c03-2a9d-4978-81e0-94d09e0e5d43	g.chr4:1701385C>G	uc003gdi.1	-	5	500	c.385G>C	c.(385-387)GAG>CAG	p.E129Q	SLBP_uc010ibx.1_Missense_Mutation_p.E136Q|SLBP_uc003gdj.1_Missense_Mutation_p.E109Q|SLBP_uc003gdk.1_Missense_Mutation_p.E90Q|SLBP_uc011bvf.1_Missense_Mutation_p.E94Q|SLBP_uc003gdl.1_Missense_Mutation_p.E46Q	NM_006527	NP_006518	Q14493	SLBP_HUMAN	stem-loop (histone) binding protein	129	RNA-binding.				DNA replication involved in S phase|histone mRNA 3'-end processing|mRNA export from nucleus|regulation of S phase|termination of RNA polymerase II transcription	cytosol|histone pre-mRNA 3'end processing complex|nucleoplasm	histone pre-mRNA DCP binding|histone pre-mRNA stem-loop binding|protein binding				0		Breast(71;0.212)|all_epithelial(65;0.241)	OV - Ovarian serous cystadenocarcinoma(23;0.0055)			TCATCTGTCTCAAAGTCAGCC	0.398000													50	55					0	0	0.048971	0	0
BOD1L	259282	broad.mit.edu	37	4	13604361	13604361	+	Missense_Mutation	SNP	C	T	T			TCGA-DW-7839-01A-11D-2136-08	TCGA-DW-7839-10A-01D-2136-08									Somatic	Phase_I	Capture				Illumina GAIIx	d305b7d5-cbb1-41bf-8b2b-1cc2ba653c20	59a27c03-2a9d-4978-81e0-94d09e0e5d43	g.chr4:13604361C>T	uc003gmz.1	-	10	4280	c.4163G>A	c.(4162-4164)AGT>AAT	p.S1388N	BOD1L_uc010idr.1_Missense_Mutation_p.S725N	NM_148894	NP_683692	Q8NFC6	BOD1L_HUMAN	biorientation of chromosomes in cell division	1388							DNA binding			ovary(5)|breast(1)	6						CGTTAACTTACTTCCAAGAGG	0.418000													57	60					0	0	0.048971	0	0
GRIA1	2890	broad.mit.edu	37	5	153078528	153078528	+	Missense_Mutation	SNP	C	G	G			TCGA-DW-7839-01A-11D-2136-08	TCGA-DW-7839-10A-01D-2136-08									Somatic	Phase_I	Capture				Illumina GAIIx	d305b7d5-cbb1-41bf-8b2b-1cc2ba653c20	59a27c03-2a9d-4978-81e0-94d09e0e5d43	g.chr5:153078528C>G	uc003lva.3	+	10	1712	c.1347C>G	c.(1345-1347)CAC>CAG	p.H449Q	GRIA1_uc003luy.3_Missense_Mutation_p.H449Q|GRIA1_uc003luz.3_Missense_Mutation_p.H354Q|GRIA1_uc011dcv.1_RNA|GRIA1_uc011dcw.1_Missense_Mutation_p.H369Q|GRIA1_uc011dcx.1_Missense_Mutation_p.H380Q|GRIA1_uc011dcy.1_Missense_Mutation_p.H459Q|GRIA1_uc011dcz.1_Missense_Mutation_p.H459Q|GRIA1_uc010jia.1_Missense_Mutation_p.H429Q	NM_001114183	NP_001107655	P42261	GRIA1_HUMAN	glutamate receptor, ionotropic, AMPA 1 isoform	449	Extracellular (Potential).				synaptic transmission	alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective glutamate receptor complex|cell junction|dendritic spine|endocytic vesicle membrane|endoplasmic reticulum membrane|neuronal cell body|postsynaptic density|postsynaptic membrane	alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity|extracellular-glutamate-gated ion channel activity|kainate selective glutamate receptor activity|PDZ domain binding			ovary(4)|skin(2)	6		Medulloblastoma(196;0.0391)|all_neural(177;0.16)|all_hematologic(541;0.21)	Kidney(363;0.000173)|KIRC - Kidney renal clear cell carcinoma(527;0.000785)		Desflurane(DB01189)|Enflurane(DB00228)|Halothane(DB01159)|Isoflurane(DB00753)|L-Glutamic Acid(DB00142)|Methoxyflurane(DB01028)|Sevoflurane(DB01236)	TTGCCAAGCACGTGGGCTACT	0.537000													31	40					0	0	0.041601	0	0
PTK7	5754	broad.mit.edu	37	6	43044271	43044271	+	Silent	SNP	T	G	G			TCGA-DW-7839-01A-11D-2136-08	TCGA-DW-7839-10A-01D-2136-08									Somatic	Phase_I	Capture				Illumina GAIIx	d305b7d5-cbb1-41bf-8b2b-1cc2ba653c20	59a27c03-2a9d-4978-81e0-94d09e0e5d43	g.chr6:43044271T>G	uc003oub.1	+	1	243	c.45T>G	c.(43-45)CCT>CCG	p.P15P	PTK7_uc003ouc.1_Silent_p.P15P|PTK7_uc003oud.1_Silent_p.P15P|PTK7_uc003oue.1_Silent_p.P15P|PTK7_uc003ouf.1_RNA|PTK7_uc003oug.1_RNA|PTK7_uc011dve.1_5'Flank|PTK7_uc003oua.2_Silent_p.P15P	NM_002821	NP_002812	Q13308	PTK7_HUMAN	PTK7 protein tyrosine kinase 7 isoform a	15					actin cytoskeleton reorganization|canonical Wnt receptor signaling pathway|cell adhesion|cell migration	cell-cell junction|integral to plasma membrane	ATP binding|transmembrane receptor protein tyrosine kinase activity			ovary(2)|large_intestine(1)	3			Colorectal(64;0.00245)|COAD - Colon adenocarcinoma(64;0.00536)|all cancers(41;0.00784)|OV - Ovarian serous cystadenocarcinoma(102;0.0423)			GCCGGTTGCCTCTGCTCAGCG	0.716000													15	7					0	0	0.033300	0	0
AHI1	54806	broad.mit.edu	37	6	135784313	135784313	+	Missense_Mutation	SNP	T	C	C			TCGA-DW-7839-01A-11D-2136-08	TCGA-DW-7839-10A-01D-2136-08									Somatic	Phase_I	Capture				Illumina GAIIx	d305b7d5-cbb1-41bf-8b2b-1cc2ba653c20	59a27c03-2a9d-4978-81e0-94d09e0e5d43	g.chr6:135784313T>C	uc003qgi.2	-	8	1265	c.881A>G	c.(880-882)CAA>CGA	p.Q294R	AHI1_uc003qgh.2_Missense_Mutation_p.Q294R|AHI1_uc003qgj.2_Missense_Mutation_p.Q294R|AHI1_uc003qgk.3_RNA|AHI1_uc003qgl.3_Missense_Mutation_p.Q294R	NM_001134831	NP_001128303	Q8N157	AHI1_HUMAN	Abelson helper integration site 1 isoform a	294						adherens junction|cilium|microtubule basal body				ovary(1)|kidney(1)|central_nervous_system(1)	3	Breast(56;0.239)|Colorectal(23;0.24)			GBM - Glioblastoma multiforme(68;0.00904)|OV - Ovarian serous cystadenocarcinoma(155;0.00991)		TGTATCATCTTGCATGCTGTC	0.313000													3	55					0	0	0.021553	0	0
HNRNPA2B1	3181	broad.mit.edu	37	7	26235509	26235509	+	Missense_Mutation	SNP	C	T	T			TCGA-DW-7839-01A-11D-2136-08	TCGA-DW-7839-10A-01D-2136-08									Somatic	Phase_I	Capture				Illumina GAIIx	d305b7d5-cbb1-41bf-8b2b-1cc2ba653c20	59a27c03-2a9d-4978-81e0-94d09e0e5d43	g.chr7:26235509C>T	uc003sxr.3	-	8	931	c.715G>A	c.(715-717)GGA>AGA	p.G239R	HNRNPA2B1_uc003sxs.3_Missense_Mutation_p.G227R	NM_031243	NP_112533	P22626	ROA2_HUMAN	heterogeneous nuclear ribonucleoprotein A2/B1	239	Gly-rich.				RNA transport	catalytic step 2 spliceosome|cytoplasm|heterogeneous nuclear ribonucleoprotein complex|nucleolus|nucleoplasm	nucleotide binding|protein binding|protein binding|RNA binding|single-stranded telomeric DNA binding			ovary(1)|central_nervous_system(1)|skin(1)	3						TCCCCAAATCCACGTCCACTG	0.378000			T	ETV1	prostate								26	34					0	0	0.041601	0	0
ST7	7982	broad.mit.edu	37	7	116869938	116869938	+	Missense_Mutation	SNP	A	C	C			TCGA-DW-7839-01A-11D-2136-08	TCGA-DW-7839-10A-01D-2136-08									Somatic	Phase_I	Capture				Illumina GAIIx	d305b7d5-cbb1-41bf-8b2b-1cc2ba653c20	59a27c03-2a9d-4978-81e0-94d09e0e5d43	g.chr7:116869938A>C	uc011knn.1	+	14	1470	c.1465A>C	c.(1465-1467)ACC>CCC	p.T489P	ST7_uc003vio.2_3'UTR|ST7_uc003viq.2_3'UTR|ST7_uc011knm.1_3'UTR|ST7_uc003vir.2_3'UTR	NM_021908	NP_068708	Q9NRC1	ST7_HUMAN	suppression of tumorigenicity 7 isoform b	Error:Variant_position_missing_in_Q9NRC1_after_alignment						integral to membrane	binding			central_nervous_system(1)|skin(1)	2	all_cancers(3;3.88e-07)|all_epithelial(6;3.42e-07)|Lung NSC(10;0.00072)|all_lung(10;0.000847)		STAD - Stomach adenocarcinoma(10;0.000512)	LUSC - Lung squamous cell carcinoma(290;0.133)		CACTCACCTCACCCGCCGCTG	0.507000													8	36					0	0	0.048971	0	0
MGAM	8972	broad.mit.edu	37	7	141731533	141731533	+	Silent	SNP	T	G	G			TCGA-DW-7839-01A-11D-2136-08	TCGA-DW-7839-10A-01D-2136-08									Somatic	Phase_I	Capture				Illumina GAIIx	d305b7d5-cbb1-41bf-8b2b-1cc2ba653c20	59a27c03-2a9d-4978-81e0-94d09e0e5d43	g.chr7:141731533T>G	uc003vwy.2	+	13	1578	c.1524T>G	c.(1522-1524)GTT>GTG	p.V508V		NM_004668	NP_004659	O43451	MGA_HUMAN	maltase-glucoamylase	508	Lumenal (Potential).|Maltase.				polysaccharide digestion|starch catabolic process	apical plasma membrane|integral to membrane	carbohydrate binding|glucan 1,4-alpha-glucosidase activity|maltose alpha-glucosidase activity			ovary(2)	2	Melanoma(164;0.0272)				Acarbose(DB00284)|Miglitol(DB00491)|Voglibose(DB04878)	ACTGTGCTGTTTGGTGGACAA	0.363000													59	62					0	0	0.048971	0	0
TAS2R41	259287	broad.mit.edu	37	7	143175477	143175477	+	Missense_Mutation	SNP	A	T	T			TCGA-DW-7839-01A-11D-2136-08	TCGA-DW-7839-10A-01D-2136-08									Somatic	Phase_I	Capture				Illumina GAIIx	d305b7d5-cbb1-41bf-8b2b-1cc2ba653c20	59a27c03-2a9d-4978-81e0-94d09e0e5d43	g.chr7:143175477A>T	uc003wdc.1	+	1	512	c.512A>T	c.(511-513)AAG>ATG	p.K171M	uc003wda.2_Intron	NM_176883	NP_795364	P59536	T2R41_HUMAN	taste receptor, type 2, member 41	171	Extracellular (Potential).				sensory perception of taste	integral to membrane	G-protein coupled receptor activity			pancreas(1)|skin(1)	2	Melanoma(164;0.15)					ATGACCTACAAGTGGAATACA	0.358000													18	25					0	0	0.038395	0	0
DENND4C	55667	broad.mit.edu	37	9	19316719	19316719	+	Missense_Mutation	SNP	A	T	T			TCGA-DW-7839-01A-11D-2136-08	TCGA-DW-7839-10A-01D-2136-08									Somatic	Phase_I	Capture				Illumina GAIIx	d305b7d5-cbb1-41bf-8b2b-1cc2ba653c20	59a27c03-2a9d-4978-81e0-94d09e0e5d43	g.chr9:19316719A>T	uc003znq.2	+	8	1014	c.981A>T	c.(979-981)CAA>CAT	p.Q327H	DENND4C_uc011lnc.1_Translation_Start_Site	NM_017925	NP_060395	Q5VZ89	DEN4C_HUMAN	DENN/MADD domain containing 4C	327	dDENN.					integral to membrane				ovary(1)|skin(1)	2						TGGAAATTCAAGAGGCATTTT	0.403000													82	98					0	0	0.048971	0	0
FAM47C	442444	broad.mit.edu	37	X	37028486	37028486	+	Missense_Mutation	SNP	C	T	T	rs142735792	byFrequency	TCGA-DW-7839-01A-11D-2136-08	TCGA-DW-7839-10A-01D-2136-08									Somatic	Phase_I	Capture				Illumina GAIIx	d305b7d5-cbb1-41bf-8b2b-1cc2ba653c20	59a27c03-2a9d-4978-81e0-94d09e0e5d43	g.chrX:37028486C>T	uc004ddl.1	+	1	2017	c.2003C>T	c.(2002-2004)CCG>CTG	p.P668L		NM_001013736	NP_001013758	Q5HY64	FA47C_HUMAN	hypothetical protein LOC442444	668										ovary(3)	3						AGTCTCCCCCCGGAGCCCCCC	0.642000													59	79					0	0	0.048971	0	0
NUDT10	170685	broad.mit.edu	37	X	51075840	51075840	+	Missense_Mutation	SNP	C	T	T			TCGA-DW-7839-01A-11D-2136-08	TCGA-DW-7839-10A-01D-2136-08									Somatic	Phase_I	Capture				Illumina GAIIx	d305b7d5-cbb1-41bf-8b2b-1cc2ba653c20	59a27c03-2a9d-4978-81e0-94d09e0e5d43	g.chrX:51075840C>T	uc004dph.2	+	2	243	c.23C>T	c.(22-24)ACA>ATA	p.T8I	NUDT10_uc004dpi.3_Missense_Mutation_p.T8I	NM_153183	NP_694853	Q8NFP7	NUD10_HUMAN	nudix-type motif 10	8						cytoplasm	diphosphoinositol-polyphosphate diphosphatase activity|metal ion binding				0	Ovarian(276;0.236)					CCCAACCAGACACGGACCTAC	0.677000													8	45					0	0	0.080935	0	0
NUDT11	55190	broad.mit.edu	37	X	51239274	51239274	+	Missense_Mutation	SNP	G	A	A			TCGA-DW-7839-01A-11D-2136-08	TCGA-DW-7839-10A-01D-2136-08									Somatic	Phase_I	Capture				Illumina GAIIx	d305b7d5-cbb1-41bf-8b2b-1cc2ba653c20	59a27c03-2a9d-4978-81e0-94d09e0e5d43	g.chrX:51239274G>A	uc010njt.2	-	1	186	c.23C>T	c.(22-24)ACG>ATG	p.T8M		NM_018159	NP_060629	Q96G61	NUD11_HUMAN	nudix-type motif 11	8						cytoplasm	diphosphoinositol-polyphosphate diphosphatase activity|metal ion binding				0	Ovarian(276;0.236)					GTAGGTCCGCGTCTGGTTGGG	0.567000										HNSCC(48;0.14)			12	11					0	0	0.080935	0	0
RGAG4	340526	broad.mit.edu	37	X	71351213	71351213	+	Missense_Mutation	SNP	T	C	C			TCGA-DW-7839-01A-11D-2136-08	TCGA-DW-7839-10A-01D-2136-08									Somatic	Phase_I	Capture				Illumina GAIIx	d305b7d5-cbb1-41bf-8b2b-1cc2ba653c20	59a27c03-2a9d-4978-81e0-94d09e0e5d43	g.chrX:71351213T>C	uc010nlh.1	-	1	539	c.178A>G	c.(178-180)ATA>GTA	p.I60V	NHSL2_uc011mqa.1_Intron|RGAG4_uc004eaj.1_RNA|NHSL2_uc004eak.1_5'Flank|NHSL2_uc010nli.2_5'Flank	NM_001024455	NP_001019626	Q5HYW3	RGAG4_HUMAN	retrotransposon gag domain containing 4	60										ovary(2)|skin(1)	3	Renal(35;0.156)					ACGGGCACTATGGGTACTGGC	0.617000													44	58					0	0	0.048971	0	0
COL11A1	1301	broad.mit.edu	37	1	103400626	103400626	+	Frame_Shift_Del	DEL	G	-	-			TCGA-DW-7839-01A-11D-2136-08	TCGA-DW-7839-10A-01D-2136-08									Somatic	Phase_I	Capture				Illumina GAIIx	d305b7d5-cbb1-41bf-8b2b-1cc2ba653c20	59a27c03-2a9d-4978-81e0-94d09e0e5d43	g.chr1:103400626delG	uc001dul.2	-	45	3800	c.3482delC	c.(3481-3483)CCTfs	p.P1161fs	COL11A1_uc001duk.2_Frame_Shift_Del_p.P357fs|COL11A1_uc001dum.2_Frame_Shift_Del_p.P1173fs|COL11A1_uc001dun.2_Frame_Shift_Del_p.P1122fs|COL11A1_uc009weh.2_Frame_Shift_Del_p.P1045fs	NM_001854	NP_001845	P12107	COBA1_HUMAN	alpha 1 type XI collagen isoform A	1161	Triple-helical region.				collagen fibril organization|detection of mechanical stimulus involved in sensory perception of sound|visual perception	collagen type XI	extracellular matrix binding|extracellular matrix structural constituent|protein binding, bridging			ovary(6)|breast(3)|upper_aerodigestive_tract(1)|central_nervous_system(1)|pancreas(1)	12		all_epithelial(167;2.52e-07)|all_lung(203;3.11e-05)|Lung NSC(277;6.61e-05)|Breast(1374;0.181)		Lung(183;0.186)|all cancers(265;0.242)|Epithelial(280;0.248)		AGCAATTCCAGGGGCACCAAC	0.448													18	30	---	---	---	---					
OR2T35	403244	broad.mit.edu	37	1	248801602	248801603	+	Frame_Shift_Ins	INS	-	CA	CA			TCGA-DW-7839-01A-11D-2136-08	TCGA-DW-7839-10A-01D-2136-08									Somatic	Phase_I	Capture				Illumina GAIIx	d305b7d5-cbb1-41bf-8b2b-1cc2ba653c20	59a27c03-2a9d-4978-81e0-94d09e0e5d43	g.chr1:248801602_248801603insCA	uc001ies.1	-	1	957_958	c.957_958insTG	c.(955-960)GTGATCfs	p.V319fs		NM_001001827	NP_001001827	Q8NGX2	O2T35_HUMAN	olfactory receptor, family 2, subfamily T,	319_320	Cytoplasmic (Potential).				sensory perception of smell	integral to membrane|plasma membrane	olfactory receptor activity				0	all_cancers(71;2.04e-05)|all_epithelial(71;1.03e-05)|Breast(184;0.00909)|Ovarian(71;0.0377)|all_lung(81;0.127)|Lung NSC(105;0.136)	all_cancers(173;0.237)	OV - Ovarian serous cystadenocarcinoma(106;0.0265)			CCCTTCCTGATCACAGTCGCCA	0.545													2	4	---	---	---	---					
HOMER2	9455	broad.mit.edu	37	15	83518619	83518620	+	Frame_Shift_Ins	INS	-	T	T			TCGA-DW-7839-01A-11D-2136-08	TCGA-DW-7839-10A-01D-2136-08									Somatic	Phase_I	Capture				Illumina GAIIx	d305b7d5-cbb1-41bf-8b2b-1cc2ba653c20	59a27c03-2a9d-4978-81e0-94d09e0e5d43	g.chr15:83518619_83518620insT	uc002bjg.2	-	9	1098_1099	c.912_913insA	c.(910-915)AAAGTGfs	p.K304fs	HOMER2_uc002bjh.2_Frame_Shift_Ins_p.K293fs|HOMER2_uc002bjj.2_Frame_Shift_Ins_p.K238fs|HOMER2_uc002bji.2_Frame_Shift_Ins_p.K249fs	NM_199330	NP_955362	Q9NSB8	HOME2_HUMAN	homer 2 isoform 2	304_305	Potential.				metabotropic glutamate receptor signaling pathway	cell junction|cytoplasm|postsynaptic density|postsynaptic membrane					0						AAGGAACGCACTTTGTCTTCCA	0.505											OREG0023389	type=REGULATORY REGION|TFbs=CTCF|Dataset=CTCF ChIP-chip sites (Ren lab)|EvidenceSubtype=ChIP-on-chip (ChIP-chip)	53	62	---	---	---	---					
TNRC6A	27327	broad.mit.edu	37	16	24802526	24802526	+	Frame_Shift_Del	DEL	G	-	-			TCGA-DW-7839-01A-11D-2136-08	TCGA-DW-7839-10A-01D-2136-08									Somatic	Phase_I	Capture				Illumina GAIIx	d305b7d5-cbb1-41bf-8b2b-1cc2ba653c20	59a27c03-2a9d-4978-81e0-94d09e0e5d43	g.chr16:24802526delG	uc002dmm.2	+	6	2677	c.2563delG	c.(2563-2565)GATfs	p.D855fs	TNRC6A_uc010bxs.2_Frame_Shift_Del_p.D602fs|TNRC6A_uc010vcc.1_Frame_Shift_Del_p.D602fs|TNRC6A_uc002dmn.2_Frame_Shift_Del_p.D602fs|TNRC6A_uc002dmo.2_Frame_Shift_Del_p.D602fs	NM_014494	NP_055309	Q8NDV7	TNR6A_HUMAN	trinucleotide repeat containing 6A	855	Sufficient for interaction with EIF2C1 and EIF2C4.				negative regulation of translation involved in gene silencing by miRNA	cytoplasmic mRNA processing body|micro-ribonucleoprotein complex	nucleotide binding|RNA binding			ovary(2)	2				GBM - Glioblastoma multiforme(48;0.0394)		TTCTGCCAGTGATAACTGGGG	0.478													28	40	---	---	---	---					
TMEM131	23505	broad.mit.edu	37	2	98427639	98427639	+	Frame_Shift_Del	DEL	T	-	-			TCGA-DW-7839-01A-11D-2136-08	TCGA-DW-7839-10A-01D-2136-08									Somatic	Phase_I	Capture				Illumina GAIIx	d305b7d5-cbb1-41bf-8b2b-1cc2ba653c20	59a27c03-2a9d-4978-81e0-94d09e0e5d43	g.chr2:98427639delT	uc002syh.3	-	18	2149	c.1920delA	c.(1918-1920)AAAfs	p.K640fs		NM_015348	NP_056163	Q92545	TM131_HUMAN	RW1 protein	640						integral to membrane				ovary(4)|central_nervous_system(2)	6						TCCCCTCTAATTTTTTTGCAG	0.393													7	307	---	---	---	---					
WFDC10A	140832	broad.mit.edu	37	20	44258534	44258534	+	Frame_Shift_Del	DEL	A	-	-			TCGA-DW-7839-01A-11D-2136-08	TCGA-DW-7839-10A-01D-2136-08									Somatic	Phase_I	Capture				Illumina GAIIx	d305b7d5-cbb1-41bf-8b2b-1cc2ba653c20	59a27c03-2a9d-4978-81e0-94d09e0e5d43	g.chr20:44258534delA	uc002xoz.2	+	1	150	c.82delA	c.(82-84)AGGfs	p.R28fs	WFDC9_uc002xoy.2_Intron	NM_080753	NP_542791	Q9H1F0	WF10A_HUMAN	WAP four-disulfide core domain 10A precursor	28						extracellular region	serine-type endopeptidase inhibitor activity				0		Myeloproliferative disorder(115;0.0122)				TGACAAGAAGAGGATGCAGAG	0.577											OREG0025983	type=REGULATORY REGION|TFbs=CTCF|Dataset=CTCF ChIP-chip sites (Ren lab)|EvidenceSubtype=ChIP-on-chip (ChIP-chip)	20	29	---	---	---	---					
SAMD9	54809	broad.mit.edu	37	7	92734994	92734994	+	Frame_Shift_Del	DEL	T	-	-			TCGA-DW-7839-01A-11D-2136-08	TCGA-DW-7839-10A-01D-2136-08									Somatic	Phase_I	Capture				Illumina GAIIx	d305b7d5-cbb1-41bf-8b2b-1cc2ba653c20	59a27c03-2a9d-4978-81e0-94d09e0e5d43	g.chr7:92734994delT	uc003umf.2	-	3	673	c.417delA	c.(415-417)AAAfs	p.K139fs	SAMD9_uc003umg.2_Frame_Shift_Del_p.K139fs	NM_017654	NP_060124	Q5K651	SAMD9_HUMAN	sterile alpha motif domain containing 9	139						cytoplasm				ovary(3)|skin(2)|breast(1)|central_nervous_system(1)	7	all_cancers(62;5.71e-11)|all_epithelial(64;3.25e-10)|Breast(17;0.000675)|Lung NSC(181;0.0969)|all_lung(186;0.125)		STAD - Stomach adenocarcinoma(171;0.000302)			TGAGCTCAACTTTTAGTGACT	0.358													51	63	---	---	---	---					
LRRC14	9684	broad.mit.edu	37	8	145746824	145746825	+	Frame_Shift_Del	DEL	AT	-	-			TCGA-DW-7839-01A-11D-2136-08	TCGA-DW-7839-10A-01D-2136-08									Somatic	Phase_I	Capture				Illumina GAIIx	d305b7d5-cbb1-41bf-8b2b-1cc2ba653c20	59a27c03-2a9d-4978-81e0-94d09e0e5d43	g.chr8:145746824_145746825delAT	uc003zdk.1	+	4	1590_1591	c.1444_1445delAT	c.(1444-1446)ATCfs	p.I482fs	LRRC14_uc003zdl.1_Frame_Shift_Del_p.I482fs|LRRC14_uc003zdo.2_5'Flank	NM_014665	NP_055480	Q15048	LRC14_HUMAN	leucine rich repeat containing 14	482											0	all_cancers(97;5.56e-11)|all_epithelial(106;3.54e-10)|Lung NSC(106;5.7e-05)|all_lung(105;0.000174)|Ovarian(258;0.0173)|Acute lymphoblastic leukemia(118;0.155)		OV - Ovarian serous cystadenocarcinoma(54;1.48e-41)|Epithelial(56;1.85e-40)|all cancers(56;3.59e-35)|BRCA - Breast invasive adenocarcinoma(115;0.0483)|Colorectal(110;0.055)			GACCACGGACATCTACGGGCGA	0.589													23	24	---	---	---	---					
