Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
AADAC	13	broad.mit.edu	37	3	151535346	151535346	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA13	154664	broad.mit.edu	37	7	48349764	48349764	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA13	154664	broad.mit.edu	37	7	48431793	48431793	+	Intron	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA13	154664	broad.mit.edu	37	7	48545808	48545808	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA1	19	broad.mit.edu	37	9	107568678	107568678	+	Nonsense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA6	23460	broad.mit.edu	37	17	67082843	67082843	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA7	10347	broad.mit.edu	37	19	1057026	1057026	+	Silent	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA8	10351	broad.mit.edu	37	17	66890271	66890271	+	Intron	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB11	8647	broad.mit.edu	37	2	169828369	169828369	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB1	5243	broad.mit.edu	37	7	87190635	87190635	+	Silent	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC11	85320	broad.mit.edu	37	16	48242392	48242392	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC11	85320	broad.mit.edu	37	16	48258303	48258303	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC12	94160	broad.mit.edu	37	16	48121967	48121967	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC1	4363	broad.mit.edu	37	16	16130471	16130471	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC3	8714	broad.mit.edu	37	17	48755287	48755287	+	Silent	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC9	10060	broad.mit.edu	37	12	21960373	21960373	+	Silent	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCD2	225	broad.mit.edu	37	12	39994472	39994472	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCF2	10061	broad.mit.edu	37	7	150921270	150921270	+	Intron	SNP	A	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABI3BP	25890	broad.mit.edu	37	3	100566448	100566448	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABP1	26	broad.mit.edu	37	7	150558147	150558147	+	Frame_Shift_Del	DEL	C	-	-			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACACA	31	broad.mit.edu	37	17	35580413	35580413	+	Intron	SNP	C	A	A	rs142810733	by1000genomes	TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACADSB	36	broad.mit.edu	37	10	124806910	124806910	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACAP2	23527	broad.mit.edu	37	3	195012484	195012484	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACCN1	40	broad.mit.edu	37	17	31344538	31344538	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACCSL	390110	broad.mit.edu	37	11	44073120	44073120	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACCS	84680	broad.mit.edu	37	11	44101139	44101139	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACOT9	23597	broad.mit.edu	37	X	23748737	23748740	+	Intron	DEL	AAAT	-	-			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACPL2	92370	broad.mit.edu	37	3	140997113	140997113	+	Intron	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACRBP	84519	broad.mit.edu	37	12	6753873	6753873	+	Intron	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSL1	2180	broad.mit.edu	37	4	185678669	185678669	+	Intron	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM1	116285	broad.mit.edu	37	16	20648257	20648257	+	Intron	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM1	116285	broad.mit.edu	37	16	20702562	20702562	+	Translation_Start_Site	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM2B	348158	broad.mit.edu	37	16	20548512	20548512	+	3'UTR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM2B	348158	broad.mit.edu	37	16	20548589	20548589	+	Silent	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM4	341392	broad.mit.edu	37	12	7477089	7477089	+	Intron	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTB	60	broad.mit.edu	37	7	5568416	5568416	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTR6	64431	broad.mit.edu	37	12	100606330	100606330	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM23	8745	broad.mit.edu	37	2	207436385	207436385	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM23	8745	broad.mit.edu	37	2	207451970	207451970	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM23	8745	broad.mit.edu	37	2	207457273	207457273	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM33	80332	broad.mit.edu	37	20	3651959	3651959	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM33	80332	broad.mit.edu	37	20	3655281	3655281	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106134513	106134513	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106208595	106208595	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106573750	106573750	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106610254	106610254	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106641492	106641492	+	Intron	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS14	140766	broad.mit.edu	37	10	72511079	72511079	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS15	170689	broad.mit.edu	37	11	130343343	130343343	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS16	170690	broad.mit.edu	37	5	5146670	5146670	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS16	170690	broad.mit.edu	37	5	5303424	5303424	+	Missense_Mutation	SNP	G	C	C	rs34586473	by1000genomes	TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS17	170691	broad.mit.edu	37	15	100594283	100594283	+	Intron	SNP	A	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS17	170691	broad.mit.edu	37	15	100739682	100739682	+	Intron	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS18	170692	broad.mit.edu	37	16	77354874	77354874	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS18	170692	broad.mit.edu	37	16	77356301	77356301	+	Missense_Mutation	SNP	C	T	T	rs142855321		TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS19	171019	broad.mit.edu	37	5	128984683	128984683	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS20	80070	broad.mit.edu	37	12	43822102	43822102	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS20	80070	broad.mit.edu	37	12	43944830	43944830	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS2	9509	broad.mit.edu	37	5	178552069	178552069	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS9	56999	broad.mit.edu	37	3	64580003	64580003	+	Silent	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS9	56999	broad.mit.edu	37	3	64587813	64587813	+	Missense_Mutation	SNP	C	A	A	rs149680592		TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTSL3	57188	broad.mit.edu	37	15	84324457	84324457	+	Intron	SNP	A	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTSL3	57188	broad.mit.edu	37	15	84651759	84651759	+	Nonsense_Mutation	SNP	G	T	T	rs147808860		TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAR	103	broad.mit.edu	37	1	154570433	154570433	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY10	55811	broad.mit.edu	37	1	167803155	167803155	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY2	108	broad.mit.edu	37	5	7717473	7717473	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY2	108	broad.mit.edu	37	5	7743902	7743902	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY2	108	broad.mit.edu	37	5	7784472	7784472	+	Intron	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADH7	131	broad.mit.edu	37	4	100340266	100340266	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADH7	131	broad.mit.edu	37	4	100349701	100349701	+	Silent	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFF3	3899	broad.mit.edu	37	2	100628032	100628032	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFM	173	broad.mit.edu	37	4	74353498	74353498	+	Frame_Shift_Del	DEL	G	-	-			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGAP2	116986	broad.mit.edu	37	12	58128445	58128445	+	Silent	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGAP6	414189	broad.mit.edu	37	10	51769059	51769059	+	Frame_Shift_Del	DEL	C	-	-			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGBL3	340351	broad.mit.edu	37	7	134814048	134814048	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGPAT4	56895	broad.mit.edu	37	6	161587511	161587511	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGPS	8540	broad.mit.edu	37	2	178305792	178305792	+	Intron	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGR3	155465	broad.mit.edu	37	7	16904562	16904562	+	Intron	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGRN	375790	broad.mit.edu	37	1	981164	981164	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGXT2L1	64850	broad.mit.edu	37	4	109681047	109681047	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGXT	189	broad.mit.edu	37	2	241814543	241814543	+	Missense_Mutation	SNP	G	T	T	rs121908527		TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHDC1	27245	broad.mit.edu	37	1	27877829	27877829	+	Silent	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK2	113146	broad.mit.edu	37	14	105410706	105410706	+	Silent	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AIM2	9447	broad.mit.edu	37	1	159042907	159042907	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AJAP1	55966	broad.mit.edu	37	1	4830052	4830052	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AJAP1	55966	broad.mit.edu	37	1	4834406	4834406	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AK3L1	205	broad.mit.edu	37	1	65691779	65691779	+	Silent	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKAP14	158798	broad.mit.edu	37	X	119053906	119053906	+	Silent	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKAP6	9472	broad.mit.edu	37	14	33004659	33004659	+	Intron	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKAP9	10142	broad.mit.edu	37	7	91736614	91736614	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKNAD1	254268	broad.mit.edu	37	1	109385919	109385919	+	Intron	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKR1B10	57016	broad.mit.edu	37	7	134225786	134225786	+	Intron	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKR1D1	6718	broad.mit.edu	37	7	137776452	137776452	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALAD	210	broad.mit.edu	37	9	116154500	116154500	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALB	213	broad.mit.edu	37	4	74277834	74277834	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH18A1	5832	broad.mit.edu	37	10	97413148	97413148	+	5'UTR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH1A1	216	broad.mit.edu	37	9	75516186	75516186	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH5A1	7915	broad.mit.edu	37	6	24505042	24505042	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALG14	199857	broad.mit.edu	37	1	95448590	95448590	+	3'UTR	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALG1L2	644974	broad.mit.edu	37	3	129810213	129810213	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALG1L	200810	broad.mit.edu	37	3	125648220	125648220	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALKBH3	221120	broad.mit.edu	37	11	43919272	43919273	+	Intron	DNP	GG	TT	TT			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALK	238	broad.mit.edu	37	2	30143133	30143133	+	Silent	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALOX5	240	broad.mit.edu	37	10	45919680	45919680	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALOX5	240	broad.mit.edu	37	10	45940969	45940969	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALPI	248	broad.mit.edu	37	2	233321859	233321859	+	Splice_Site	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALPK1	80216	broad.mit.edu	37	4	113360972	113360972	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALPK2	115701	broad.mit.edu	37	18	56274666	56274666	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMAC1	146861	broad.mit.edu	37	17	33520375	33520375	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMACR	23600	broad.mit.edu	37	5	33989210	33989210	+	Frame_Shift_Del	DEL	T	-	-			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMOT	154796	broad.mit.edu	37	X	112024109	112024110	+	Intron	DNP	AT	TC	TC			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMOT	154796	broad.mit.edu	37	X	112058719	112058719	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMPH	273	broad.mit.edu	37	7	38471728	38471728	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMPH	273	broad.mit.edu	37	7	38533894	38533894	+	Intron	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANGPT4	51378	broad.mit.edu	37	20	871025	871026	+	Intron	DNP	TG	AT	AT			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANGPT4	51378	broad.mit.edu	37	20	875147	875147	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANGPTL2	23452	broad.mit.edu	37	9	129854077	129854077	+	Missense_Mutation	SNP	C	T	T	rs141690990		TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK1	286	broad.mit.edu	37	8	41545644	41545644	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK2	287	broad.mit.edu	37	4	113748371	113748371	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK2	287	broad.mit.edu	37	4	114238831	114238831	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK2	287	broad.mit.edu	37	4	114271284	114271284	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKAR	150709	broad.mit.edu	37	2	190585554	190585554	+	Intron	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKFN1	162282	broad.mit.edu	37	17	54517681	54517681	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKHD1-EIF4EBP3	404734	broad.mit.edu	37	5	139839059	139839059	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKH	56172	broad.mit.edu	37	5	14711380	14711380	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKLE2	23141	broad.mit.edu	37	12	133331553	133331553	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD12	23253	broad.mit.edu	37	18	9216825	9216825	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD17	26057	broad.mit.edu	37	4	73957800	73957800	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD19	138649	broad.mit.edu	37	9	95650013	95650013	+	Intron	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD20B	729171	broad.mit.edu	37	2	95494970	95494970	+	Intron	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD20B	729171	broad.mit.edu	37	2	95497901	95497901	+	Intron	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD30B	374860	broad.mit.edu	37	18	14780020	14780020	+	Silent	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD30B	374860	broad.mit.edu	37	18	14784560	14784560	+	Intron	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD58	347454	broad.mit.edu	37	X	118893249	118893249	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO2	57101	broad.mit.edu	37	12	5685094	5685094	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO3	63982	broad.mit.edu	37	11	26547293	26547293	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO6	196527	broad.mit.edu	37	12	45784253	45784253	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP3B2	8120	broad.mit.edu	37	15	83331855	83331855	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP3B2	8120	broad.mit.edu	37	15	83332643	83332643	+	Silent	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APLNR	187	broad.mit.edu	37	11	57004350	57004350	+	Silent	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOBEC1	339	broad.mit.edu	37	12	7805093	7805093	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOBEC3A	200315	broad.mit.edu	37	22	39358627	39358627	+	3'UTR	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOBEC3C	27350	broad.mit.edu	37	22	39414514	39414515	+	3'UTR	INS	-	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOB	338	broad.mit.edu	37	2	21225048	21225048	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP18	93663	broad.mit.edu	37	6	129959492	129959492	+	Intron	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP22	58504	broad.mit.edu	37	10	49654495	49654495	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP39	80728	broad.mit.edu	37	8	145830920	145830920	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP6	395	broad.mit.edu	37	X	11187941	11187941	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF10L	55160	broad.mit.edu	37	1	17954076	17954076	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF11	9826	broad.mit.edu	37	1	157014186	157014186	+	5'UTR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF4	50649	broad.mit.edu	37	2	131688652	131688652	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARID1A	8289	broad.mit.edu	37	1	27056169	27056169	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARID1B	57492	broad.mit.edu	37	6	157511283	157511283	+	Silent	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARL6IP1	23204	broad.mit.edu	37	16	18804768	18804768	+	Intron	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARMC3	219681	broad.mit.edu	37	10	23295898	23295898	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARMC4	55130	broad.mit.edu	37	10	28284091	28284091	+	5'UTR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARMCX5	64860	broad.mit.edu	37	X	101857063	101857063	+	5'UTR	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARNT2	9915	broad.mit.edu	37	15	80750291	80750291	+	Silent	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARNT2	9915	broad.mit.edu	37	15	80884026	80884026	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARPP21	10777	broad.mit.edu	37	3	35723355	35723356	+	Frame_Shift_Del	DEL	GA	-	-			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARPP21	10777	broad.mit.edu	37	3	35723364	35723364	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARPP21	10777	broad.mit.edu	37	3	35732307	35732307	+	Intron	DEL	G	-	-			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARPP21	10777	broad.mit.edu	37	3	35834139	35834139	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARR3	407	broad.mit.edu	37	X	69489846	69489846	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARR3	407	broad.mit.edu	37	X	69499927	69499927	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARSH	347527	broad.mit.edu	37	X	2924774	2924774	+	Intron	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AR	367	broad.mit.edu	37	X	66941689	66941689	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASAP1	50807	broad.mit.edu	37	8	131193083	131193083	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASB17	127247	broad.mit.edu	37	1	76398059	76398059	+	5'UTR	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASB6	140459	broad.mit.edu	37	9	132397454	132397454	+	3'UTR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASB9	140462	broad.mit.edu	37	X	15276996	15276996	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASPH	444	broad.mit.edu	37	8	62580765	62580765	+	Intron	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASPM	259266	broad.mit.edu	37	1	197070690	197070690	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN1	460	broad.mit.edu	37	1	176845592	176845592	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN2	23245	broad.mit.edu	37	9	119202992	119202992	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASXL3	80816	broad.mit.edu	37	18	31324687	31324687	+	Silent	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATAD5	79915	broad.mit.edu	37	17	29157988	29157988	+	5'Flank	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATF6	22926	broad.mit.edu	37	1	161753749	161753749	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATG2B	55102	broad.mit.edu	37	14	96789104	96789104	+	Intron	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATL1	51062	broad.mit.edu	37	14	51080040	51080040	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATL2	64225	broad.mit.edu	37	2	38570580	38570580	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP10B	23120	broad.mit.edu	37	5	160114961	160114961	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP11B	23200	broad.mit.edu	37	3	182597421	182597421	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP12A	479	broad.mit.edu	37	13	25268600	25268600	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP13A5	344905	broad.mit.edu	37	3	193029690	193029690	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2A3	489	broad.mit.edu	37	17	3840843	3840843	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2A3	489	broad.mit.edu	37	17	3840845	3840845	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2A3	489	broad.mit.edu	37	17	3854535	3854536	+	Intron	DNP	CC	AA	AA			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP5C1	509	broad.mit.edu	37	10	7838159	7838159	+	Intron	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6AP1	537	broad.mit.edu	37	X	153664008	153664008	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6V0D1	9114	broad.mit.edu	37	16	67487352	67487352	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6V1B2	526	broad.mit.edu	37	8	20068141	20068141	+	Silent	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP7A	538	broad.mit.edu	37	X	77302208	77302208	+	3'UTR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP7B	540	broad.mit.edu	37	13	52542619	52542620	+	Missense_Mutation	DNP	CA	AT	AT			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATRNL1	26033	broad.mit.edu	37	10	116930951	116930951	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATRN	8455	broad.mit.edu	37	20	3520964	3520964	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATRX	546	broad.mit.edu	37	X	76875947	76875947	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATRX	546	broad.mit.edu	37	X	76889981	76889981	+	Intron	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATXN1	6310	broad.mit.edu	37	6	16327921	16327921	+	Missense_Mutation	SNP	C	A	A	rs142039862	by1000genomes	TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
B3GNT5	84002	broad.mit.edu	37	3	182987453	182987453	+	5'UTR	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
B4GALNT4	338707	broad.mit.edu	37	11	373322	373322	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BACH1	571	broad.mit.edu	37	21	30699390	30699390	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAGE2	85319	broad.mit.edu	37	21	11039169	11039169	+	3'UTR	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAHD1	22893	broad.mit.edu	37	15	40751681	40751681	+	Nonsense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAI1	575	broad.mit.edu	37	8	143570376	143570376	+	Intron	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAI3	577	broad.mit.edu	37	6	69666725	69666725	+	Intron	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAI3	577	broad.mit.edu	37	6	70048873	70048873	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAI3	577	broad.mit.edu	37	6	70065869	70065869	+	Intron	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BBS9	27241	broad.mit.edu	37	7	33392559	33392559	+	Intron	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCL8	606	broad.mit.edu	37	15	20874904	20874904	+	Silent	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCLAF1	9774	broad.mit.edu	37	6	136597158	136597158	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCLAF1	9774	broad.mit.edu	37	6	136600943	136600943	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCOR	54880	broad.mit.edu	37	X	39934315	39934315	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BDH2	56898	broad.mit.edu	37	4	104003908	104003908	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BDP1	55814	broad.mit.edu	37	5	70837174	70837174	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BEYLA	497634	broad.mit.edu	37	8	47751998	47751998	+	5'Flank	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BIN1	274	broad.mit.edu	37	2	127821174	127821174	+	Silent	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BIRC5	332	broad.mit.edu	37	17	76212684	76212684	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BIRC6	57448	broad.mit.edu	37	2	32715149	32715149	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BLM	641	broad.mit.edu	37	15	91358332	91358332	+	Silent	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BLNK	29760	broad.mit.edu	37	10	98006725	98006725	+	Intron	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMP10	27302	broad.mit.edu	37	2	69093488	69093488	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMP10	27302	broad.mit.edu	37	2	69093720	69093720	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMP1	649	broad.mit.edu	37	8	22051524	22051525	+	Intron	DNP	GG	AT	AT			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BNC2	54796	broad.mit.edu	37	9	16436690	16436690	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BOC	91653	broad.mit.edu	37	3	112989921	112989921	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BOD1L	259282	broad.mit.edu	37	4	13603728	13603728	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BOD1L	259282	broad.mit.edu	37	4	13606445	13606445	+	Silent	SNP	C	T	T	rs146630428	byFrequency	TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BOD1L	259282	broad.mit.edu	37	4	13612688	13612688	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BPI	671	broad.mit.edu	37	20	36963004	36963004	+	Intron	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BPNT1	10380	broad.mit.edu	37	1	220236169	220236169	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRCA2	675	broad.mit.edu	37	13	32914849	32914849	+	Silent	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRCA2	675	broad.mit.edu	37	13	32944679	32944679	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BSCL2	26580	broad.mit.edu	37	11	62458593	62458593	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTBD1	53339	broad.mit.edu	37	15	83687105	83687105	+	Intron	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTD	686	broad.mit.edu	37	3	15643552	15643552	+	Intron	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTN3A2	11118	broad.mit.edu	37	6	26377086	26377086	+	3'UTR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTRC	8945	broad.mit.edu	37	10	103298106	103298106	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf140	387640	broad.mit.edu	37	10	21804537	21804537	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf76	79591	broad.mit.edu	37	10	103750513	103750513	+	Intron	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf90	118611	broad.mit.edu	37	10	128147646	128147646	+	Silent	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf93	255352	broad.mit.edu	37	10	134752117	134752117	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf93	255352	broad.mit.edu	37	10	134752355	134752355	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf30	56946	broad.mit.edu	37	11	76253421	76253421	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf73	51501	broad.mit.edu	37	11	86048380	86048380	+	Intron	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf51	283450	broad.mit.edu	37	12	112650355	112650355	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf51	283450	broad.mit.edu	37	12	112681597	112681597	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C13orf18	80183	broad.mit.edu	37	13	47011991	47011991	+	5'UTR	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C13orf23	80209	broad.mit.edu	37	13	39587831	39587831	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C13orf23	80209	broad.mit.edu	37	13	39587866	39587866	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C13orf26	122046	broad.mit.edu	37	13	31543049	31543049	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C13orf33	84935	broad.mit.edu	37	13	31495871	31495871	+	Silent	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf101	54916	broad.mit.edu	37	14	57092056	57092056	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf119	55017	broad.mit.edu	37	14	23567325	23567325	+	3'UTR	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf39	56905	broad.mit.edu	37	15	75500971	75500971	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf41	84529	broad.mit.edu	37	15	36906363	36906363	+	Intron	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf102	400591	broad.mit.edu	37	17	32904699	32904699	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf57	124989	broad.mit.edu	37	17	45419355	45419355	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf66	256957	broad.mit.edu	37	17	34195624	34195624	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf75	64149	broad.mit.edu	37	17	30665158	30665158	+	Intron	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C19orf10	56005	broad.mit.edu	37	19	4670147	4670147	+	Intron	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1QC	714	broad.mit.edu	37	1	22970730	22970730	+	Intron	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf157	284573	broad.mit.edu	37	1	204006249	204006249	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf173	127254	broad.mit.edu	37	1	75037552	75037552	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf173	127254	broad.mit.edu	37	1	75038096	75038096	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf173	127254	broad.mit.edu	37	1	75038387	75038387	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf35	79169	broad.mit.edu	37	1	228288678	228288678	+	3'UTR	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf87	127795	broad.mit.edu	37	1	60499070	60499070	+	Intron	SNP	C	A	A	rs35194533		TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf112	140688	broad.mit.edu	37	20	31041420	31041420	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf26	26074	broad.mit.edu	37	20	20234189	20234189	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf27	54976	broad.mit.edu	37	20	3735083	3735083	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf94	128710	broad.mit.edu	37	20	10594456	10594456	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C21orf128	150147	broad.mit.edu	37	21	43523974	43523974	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C22orf25	128989	broad.mit.edu	37	22	20031059	20031059	+	Intron	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf18	54978	broad.mit.edu	37	2	27001208	27001208	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf27A	29798	broad.mit.edu	37	2	132481411	132481411	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf27A	29798	broad.mit.edu	37	2	132508254	132508254	+	5'UTR	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf53	339779	broad.mit.edu	37	2	27360750	27360750	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf54	79919	broad.mit.edu	37	2	241830951	241830951	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf61	285051	broad.mit.edu	37	2	47378505	47378506	+	Frame_Shift_Ins	INS	-	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf77	129881	broad.mit.edu	37	2	170518666	170518666	+	Intron	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3	718	broad.mit.edu	37	19	6678128	6678128	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf30	152405	broad.mit.edu	37	3	118865705	118865705	+	Silent	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf30	152405	broad.mit.edu	37	3	118865774	118865774	+	Silent	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf30	152405	broad.mit.edu	37	3	118866462	118866463	+	Intron	DNP	CC	AG	AG			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf38	285237	broad.mit.edu	37	3	88205744	88205744	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf43	255798	broad.mit.edu	37	3	196241863	196241863	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf14	84273	broad.mit.edu	37	4	57839404	57839404	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf21	55345	broad.mit.edu	37	4	113460895	113460895	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf22	255119	broad.mit.edu	37	4	81307719	81307719	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf37	285555	broad.mit.edu	37	4	98946952	98946952	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf37	285555	broad.mit.edu	37	4	99030525	99030525	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf43	55319	broad.mit.edu	37	4	164435322	164435322	+	Intron	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf43	55319	broad.mit.edu	37	4	164436533	164436533	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5AR1	728	broad.mit.edu	37	19	47824025	47824026	+	Frame_Shift_Del	DEL	GA	-	-			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6	729	broad.mit.edu	37	5	41201792	41201792	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf118	168090	broad.mit.edu	37	6	165706973	165706973	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf142	90523	broad.mit.edu	37	6	54122140	54122140	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf97	80129	broad.mit.edu	37	6	151914468	151914468	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf58	79974	broad.mit.edu	37	7	120655887	120655887	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf58	79974	broad.mit.edu	37	7	120767242	120767242	+	Silent	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8A	731	broad.mit.edu	37	1	57349120	57349120	+	Intron	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8orf37	157657	broad.mit.edu	37	8	96275920	96275921	+	Frame_Shift_Ins	INS	-	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8orf73	642475	broad.mit.edu	37	8	144652142	144652142	+	Silent	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8orf84	157869	broad.mit.edu	37	8	73993338	73993338	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf102	375748	broad.mit.edu	37	9	98728714	98728714	+	Intron	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CA4	762	broad.mit.edu	37	17	58236674	58236675	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACHD1	57685	broad.mit.edu	37	1	65120336	65120336	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1A	773	broad.mit.edu	37	19	13340978	13340978	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1B	774	broad.mit.edu	37	9	140807751	140807751	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1B	774	broad.mit.edu	37	9	141009868	141009868	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1C	775	broad.mit.edu	37	12	2791141	2791141	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1D	776	broad.mit.edu	37	3	53836179	53836179	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1F	778	broad.mit.edu	37	X	49086871	49086871	+	Intron	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA2D1	781	broad.mit.edu	37	7	81579550	81579550	+	3'UTR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA2D1	781	broad.mit.edu	37	7	81637025	81637025	+	Silent	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA2D4	93589	broad.mit.edu	37	12	1949933	1949933	+	Silent	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNB2	783	broad.mit.edu	37	10	18551016	18551017	+	Intron	DNP	GG	TT	TT			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACYBP	27101	broad.mit.edu	37	1	174977926	174977926	+	Intron	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CADPS	8618	broad.mit.edu	37	3	62636564	62636564	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALB1	793	broad.mit.edu	37	8	91081256	91081256	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALCRL	10203	broad.mit.edu	37	2	188247864	188247864	+	Intron	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALCR	799	broad.mit.edu	37	7	93098112	93098112	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMSAP1L1	23271	broad.mit.edu	37	1	200817577	200817577	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPN11	11131	broad.mit.edu	37	6	44137734	44137734	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPN11	11131	broad.mit.edu	37	6	44145116	44145116	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPN11	11131	broad.mit.edu	37	6	44147612	44147612	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPN3	825	broad.mit.edu	37	15	42703407	42703407	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPN6	827	broad.mit.edu	37	X	110492382	110492382	+	Intron	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPN6	827	broad.mit.edu	37	X	110497565	110497565	+	Silent	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPNS2	84290	broad.mit.edu	37	16	55600831	55600831	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPS2	84698	broad.mit.edu	37	12	75686950	75686950	+	Intron	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CARD6	84674	broad.mit.edu	37	5	40843682	40843682	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CARS	833	broad.mit.edu	37	11	3038592	3038592	+	Intron	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASK	8573	broad.mit.edu	37	X	41437556	41437556	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASP2	835	broad.mit.edu	37	7	142988812	142988812	+	Intron	SNP	A	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASP2	835	broad.mit.edu	37	7	142989412	142989412	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASP6	839	broad.mit.edu	37	4	110610629	110610629	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASR	846	broad.mit.edu	37	3	121976017	121976017	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CBLN2	147381	broad.mit.edu	37	18	70205360	70205360	+	3'UTR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC105	126402	broad.mit.edu	37	19	15132407	15132407	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC129	223075	broad.mit.edu	37	7	31682505	31682505	+	Silent	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC129	223075	broad.mit.edu	37	7	31682811	31682811	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC13	152206	broad.mit.edu	37	3	42784571	42784571	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC15	80071	broad.mit.edu	37	11	124857874	124857874	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC18	343099	broad.mit.edu	37	1	93672778	93672778	+	Silent	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC27	148870	broad.mit.edu	37	1	3669111	3669111	+	Silent	SNP	G	T	T	rs145565766	byFrequency	TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC27	148870	broad.mit.edu	37	1	3679923	3679923	+	Silent	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC30	728621	broad.mit.edu	37	1	43021930	43021930	+	Nonsense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC3	83643	broad.mit.edu	37	10	13100196	13100196	+	Intron	DEL	C	-	-			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC50	152137	broad.mit.edu	37	3	191078943	191078943	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC50	152137	broad.mit.edu	37	3	191092810	191092810	+	Intron	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC52	152185	broad.mit.edu	37	3	113225516	113225516	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC61	729440	broad.mit.edu	37	19	46511611	46511611	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC62	84660	broad.mit.edu	37	12	123286247	123286247	+	Silent	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC63	160762	broad.mit.edu	37	12	111290818	111290818	+	Intron	SNP	C	A	A	rs147506764	by1000genomes	TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC81	60494	broad.mit.edu	37	11	86133561	86133561	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC88C	440193	broad.mit.edu	37	14	91772188	91772188	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCHCR1	54535	broad.mit.edu	37	6	31116273	31116273	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCL1	6346	broad.mit.edu	37	17	32688967	32688967	+	Intron	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCL26	10344	broad.mit.edu	37	7	75398949	75398949	+	3'UTR	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCT8L2	150160	broad.mit.edu	37	22	17072830	17072830	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD1D	912	broad.mit.edu	37	1	158152114	158152114	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD1E	913	broad.mit.edu	37	1	158325000	158325000	+	Intron	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD207	50489	broad.mit.edu	37	2	71058202	71058202	+	Silent	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD22	933	broad.mit.edu	37	19	35827309	35827309	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD22	933	broad.mit.edu	37	19	35832311	35832311	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD276	80381	broad.mit.edu	37	15	73995330	73995330	+	Silent	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD37	951	broad.mit.edu	37	19	49838763	49838763	+	5'UTR	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD44	960	broad.mit.edu	37	11	35219769	35219769	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD6	923	broad.mit.edu	37	11	60781146	60781146	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD97	976	broad.mit.edu	37	19	14508153	14508153	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC14A	8556	broad.mit.edu	37	1	100858668	100858668	+	Intron	SNP	A	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC14C	168448	broad.mit.edu	37	7	48964947	48964947	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC20	991	broad.mit.edu	37	1	43828709	43828709	+	Nonsense_Mutation	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC73	79577	broad.mit.edu	37	1	193205393	193205393	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH10	1008	broad.mit.edu	37	5	24537756	24537756	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH12	1010	broad.mit.edu	37	5	21882777	21882777	+	Intron	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH12	1010	broad.mit.edu	37	5	21884278	21884278	+	Intron	SNP	A	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH13	1012	broad.mit.edu	37	16	83250957	83250957	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH18	1016	broad.mit.edu	37	5	19473540	19473540	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH18	1016	broad.mit.edu	37	5	19520996	19520996	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH22	64405	broad.mit.edu	37	20	44828105	44828105	+	Silent	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH23	64072	broad.mit.edu	37	10	73544644	73544644	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH23	64072	broad.mit.edu	37	10	73558956	73558956	+	Silent	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH26	60437	broad.mit.edu	37	20	58564270	58564270	+	Intron	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH26	60437	broad.mit.edu	37	20	58576534	58576534	+	Intron	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH6	1004	broad.mit.edu	37	5	31294153	31294153	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH6	1004	broad.mit.edu	37	5	31322999	31322999	+	Nonsense_Mutation	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH8	1006	broad.mit.edu	37	16	61761189	61761189	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH8	1006	broad.mit.edu	37	16	61823218	61823218	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH9	1007	broad.mit.edu	37	5	26890739	26890739	+	Intron	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH9	1007	broad.mit.edu	37	5	26902551	26902551	+	Intron	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH9	1007	broad.mit.edu	37	5	26988225	26988225	+	Silent	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDHR3	222256	broad.mit.edu	37	7	105664968	105664968	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDKN1A	1026	broad.mit.edu	37	6	36653568	36653568	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDYL	9425	broad.mit.edu	37	6	4935708	4935708	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEACAM21	90273	broad.mit.edu	37	19	42085939	42085939	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELF2	10659	broad.mit.edu	37	10	11299746	11299746	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELSR2	1952	broad.mit.edu	37	1	109801502	109801502	+	Silent	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELSR2	1952	broad.mit.edu	37	1	109807747	109807747	+	Intron	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELSR2	1952	broad.mit.edu	37	1	109810087	109810087	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEL	1056	broad.mit.edu	37	9	135942025	135942025	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CENPI	2491	broad.mit.edu	37	X	100385102	100385102	+	Intron	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CENPI	2491	broad.mit.edu	37	X	100402979	100402979	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP135	9662	broad.mit.edu	37	4	56858234	56858234	+	Silent	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CERCAM	51148	broad.mit.edu	37	9	131185654	131185654	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CES7	221223	broad.mit.edu	37	16	55903522	55903522	+	Splice_Site	SNP	C	G	G	rs144674577		TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFB	629	broad.mit.edu	37	6	31917947	31917947	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFH	3075	broad.mit.edu	37	1	196645094	196645094	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFI	3426	broad.mit.edu	37	4	110681705	110681705	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CGA	1081	broad.mit.edu	37	6	87797821	87797821	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CGB	1082	broad.mit.edu	37	19	49541884	49541884	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHAF1A	10036	broad.mit.edu	37	19	4405995	4405995	+	Intron	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHAF1A	10036	broad.mit.edu	37	19	4433412	4433412	+	Missense_Mutation	SNP	A	T	T	rs8100525	byFrequency;by1000genomes	TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHAT	1103	broad.mit.edu	37	10	50854544	50854544	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHCHD7	79145	broad.mit.edu	37	8	57127245	57127245	+	Intron	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD1L	9557	broad.mit.edu	37	1	146727415	146727415	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD2	1106	broad.mit.edu	37	15	93487673	93487673	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD2	1106	broad.mit.edu	37	15	93499635	93499635	+	Intron	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD3	1107	broad.mit.edu	37	17	7797419	7797419	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHI3L2	1117	broad.mit.edu	37	1	111778703	111778703	+	Silent	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRM2	1129	broad.mit.edu	37	7	136699793	136699793	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRM2	1129	broad.mit.edu	37	7	136700022	136700022	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRM2	1129	broad.mit.edu	37	7	136700794	136700794	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRM2	1129	broad.mit.edu	37	7	136700962	136700962	+	Silent	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRM3	1131	broad.mit.edu	37	1	240070921	240070921	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRNA1	1134	broad.mit.edu	37	2	175622431	175622431	+	Intron	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRNB4	1143	broad.mit.edu	37	15	78917515	78917515	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHST13	166012	broad.mit.edu	37	3	126261333	126261333	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CIAO1	9391	broad.mit.edu	37	2	96936949	96936949	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CIB2	10518	broad.mit.edu	37	15	78398247	78398247	+	Frame_Shift_Del	DEL	C	-	-			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CITED2	10370	broad.mit.edu	37	6	139694840	139694840	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CKAP2L	150468	broad.mit.edu	37	2	113504007	113504007	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CKMT1B	1159	broad.mit.edu	37	15	43891507	43891507	+	3'UTR	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CKMT2	1160	broad.mit.edu	37	5	80561794	80561794	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCN1	1180	broad.mit.edu	37	7	143016890	143016890	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCN1	1180	broad.mit.edu	37	7	143018980	143018980	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCN4	1183	broad.mit.edu	37	X	10174600	10174600	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCN6	1185	broad.mit.edu	37	1	11889329	11889329	+	Nonsense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCNKA	1187	broad.mit.edu	37	1	16356507	16356507	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLDN17	26285	broad.mit.edu	37	21	31538561	31538561	+	Silent	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLDN22	53842	broad.mit.edu	37	4	184240784	184240784	+	Silent	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLDND1	56650	broad.mit.edu	37	3	98240144	98240144	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC17A	388512	broad.mit.edu	37	19	14705931	14705931	+	Intron	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC5A	23601	broad.mit.edu	37	7	141631528	141631528	+	Frame_Shift_Del	DEL	G	-	-			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLPX	10845	broad.mit.edu	37	15	65449190	65449190	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLSPN	63967	broad.mit.edu	37	1	36203045	36203045	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLSTN2	64084	broad.mit.edu	37	3	140167591	140167591	+	Intron	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLSTN2	64084	broad.mit.edu	37	3	140282640	140282640	+	Intron	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLTA	1211	broad.mit.edu	37	9	36304087	36304087	+	RNA	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLVS2	134829	broad.mit.edu	37	6	123319273	123319273	+	Silent	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CMBL	134147	broad.mit.edu	37	5	10286381	10286381	+	Intron	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CMTM5	116173	broad.mit.edu	37	14	23847565	23847565	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNBD1	168975	broad.mit.edu	37	8	87917399	87917399	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNGA2	1260	broad.mit.edu	37	X	150912360	150912360	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNGB3	54714	broad.mit.edu	37	8	87656939	87656939	+	Intron	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNKSR1	10256	broad.mit.edu	37	1	26516098	26516122	+	3'UTR	DEL	CTGACGTGTCCAGGACAGAGCATCC	-	-			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNKSR2	22866	broad.mit.edu	37	X	21549943	21549943	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN4	152330	broad.mit.edu	37	3	2908649	2908649	+	Intron	SNP	A	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN5	53942	broad.mit.edu	37	11	100061783	100061783	+	Intron	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN5	53942	broad.mit.edu	37	11	99932087	99932087	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP2	26047	broad.mit.edu	37	7	146471471	146471471	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP5	129684	broad.mit.edu	37	2	125555951	125555951	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP5	129684	broad.mit.edu	37	2	125671721	125671721	+	Silent	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103354296	103354296	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103379962	103379962	+	Splice_Site	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103412446	103412446	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL14A1	7373	broad.mit.edu	37	8	121354612	121354612	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL15A1	1306	broad.mit.edu	37	9	101784315	101784315	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL19A1	1310	broad.mit.edu	37	6	70778330	70778330	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL19A1	1310	broad.mit.edu	37	6	70916803	70916803	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL1A1	1277	broad.mit.edu	37	17	48271878	48271878	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL1A2	1278	broad.mit.edu	37	7	94028386	94028386	+	Missense_Mutation	SNP	G	T	T	rs139528613	byFrequency;by1000genomes	TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL1A2	1278	broad.mit.edu	37	7	94040229	94040229	+	Missense_Mutation	SNP	G	T	T	rs72658109		TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL22A1	169044	broad.mit.edu	37	8	139736816	139736816	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL22A1	169044	broad.mit.edu	37	8	139749906	139749906	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL24A1	255631	broad.mit.edu	37	1	86250028	86250028	+	Nonsense_Mutation	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL25A1	84570	broad.mit.edu	37	4	109859044	109859044	+	Intron	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL3A1	1281	broad.mit.edu	37	2	189874906	189874906	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A1	1282	broad.mit.edu	37	13	110822946	110822946	+	Silent	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A5	1287	broad.mit.edu	37	X	107864945	107864945	+	Intron	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A5	1287	broad.mit.edu	37	X	107911595	107911595	+	Silent	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A5	1287	broad.mit.edu	37	X	107918012	107918013	+	Intron	INS	-	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A6	1288	broad.mit.edu	37	X	107418907	107418907	+	Missense_Mutation	SNP	C	A	A	rs140519216	byFrequency	TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A6	1288	broad.mit.edu	37	X	107433555	107433555	+	Intron	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A6	1288	broad.mit.edu	37	X	107447901	107447901	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A1	1289	broad.mit.edu	37	9	137622368	137622368	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A3	50509	broad.mit.edu	37	19	10096644	10096644	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL6A6	131873	broad.mit.edu	37	3	130287008	130287008	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL6A6	131873	broad.mit.edu	37	3	130293335	130293335	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL7A1	1294	broad.mit.edu	37	3	48612869	48612869	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL9A1	1297	broad.mit.edu	37	6	70976304	70976304	+	Intron	SNP	A	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL9A1	1297	broad.mit.edu	37	6	71003856	71003856	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL9A3	1299	broad.mit.edu	37	20	61458657	61458657	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CORO2A	7464	broad.mit.edu	37	9	100892076	100892076	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COX18	285521	broad.mit.edu	37	4	73923758	73923758	+	3'UTR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPA2	1358	broad.mit.edu	37	7	129929431	129929431	+	Silent	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPAMD8	27151	broad.mit.edu	37	19	17068695	17068695	+	Frame_Shift_Del	DEL	G	-	-			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPAMD8	27151	broad.mit.edu	37	19	17119987	17119987	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPB2	1361	broad.mit.edu	37	13	46658366	46658366	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPM	1368	broad.mit.edu	37	12	69264028	69264028	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPN2	1370	broad.mit.edu	37	3	194062503	194062503	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPNE1	8904	broad.mit.edu	37	20	34220814	34220814	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPNE5	57699	broad.mit.edu	37	6	36711516	36711516	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPO	130749	broad.mit.edu	37	2	207826953	207826953	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPS1	1373	broad.mit.edu	37	2	211447452	211447452	+	Intron	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPXCR1	53336	broad.mit.edu	37	X	88008723	88008723	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPXM2	119587	broad.mit.edu	37	10	125521626	125521626	+	Silent	SNP	G	T	T	rs62640889	byFrequency;by1000genomes	TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CR1	1378	broad.mit.edu	37	1	207758216	207758216	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRIM1	51232	broad.mit.edu	37	2	36737268	36737268	+	Nonsense_Mutation	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRISP3	10321	broad.mit.edu	37	6	49696492	49696492	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRMP1	1400	broad.mit.edu	37	4	5843073	5843073	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRYGS	1427	broad.mit.edu	37	3	186256439	186256439	+	3'UTR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSF1R	1436	broad.mit.edu	37	5	149434825	149434825	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSF2RA	1438	broad.mit.edu	37	X	1413187	1413187	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSH2	1443	broad.mit.edu	37	17	61950712	61950712	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSH2	1443	broad.mit.edu	37	17	61951015	61951015	+	5'UTR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD2	114784	broad.mit.edu	37	1	34118079	34118079	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD2	114784	broad.mit.edu	37	1	34164250	34164250	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD2	114784	broad.mit.edu	37	1	34285977	34285977	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113259209	113259209	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113347734	113347734	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113364743	113364743	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113402908	113402908	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113504786	113504786	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113648979	113648979	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113657316	113657316	+	Intron	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113662513	113662513	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSNK1A1P	161635	broad.mit.edu	37	15	37109556	37109556	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CST8	10047	broad.mit.edu	37	20	23473776	23473776	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSTF2	1478	broad.mit.edu	37	X	100093222	100093222	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTAGE5	4253	broad.mit.edu	37	14	39818034	39818034	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTAGE9	643854	broad.mit.edu	37	6	132031874	132031874	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA2	1496	broad.mit.edu	37	2	80136922	80136922	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA3	29119	broad.mit.edu	37	10	69281494	69281494	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNND2	1501	broad.mit.edu	37	5	11117571	11117571	+	Silent	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTTNBP2	83992	broad.mit.edu	37	7	117432814	117432814	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUBN	8029	broad.mit.edu	37	10	16996591	16996591	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUBN	8029	broad.mit.edu	37	10	17089615	17089615	+	Intron	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUL4B	8450	broad.mit.edu	37	X	119678060	119678060	+	Splice_Site	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUTC	51076	broad.mit.edu	37	10	101502783	101502783	+	Intron	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUZD1	50624	broad.mit.edu	37	10	124595771	124595771	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CWH43	80157	broad.mit.edu	37	4	48996880	48996880	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CWH43	80157	broad.mit.edu	37	4	49040333	49040333	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXorf21	80231	broad.mit.edu	37	X	30577701	30577701	+	Nonsense_Mutation	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXorf59	286464	broad.mit.edu	37	X	36089913	36089913	+	Intron	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYBB	1536	broad.mit.edu	37	X	37664301	37664301	+	Silent	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYHR1	50626	broad.mit.edu	37	8	145689627	145689627	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYLC2	1539	broad.mit.edu	37	9	105767254	105767254	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP11B1	1584	broad.mit.edu	37	8	143957222	143957222	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP2A7	1549	broad.mit.edu	37	19	41515415	41515415	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP2C19	1557	broad.mit.edu	37	10	96609839	96609839	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP2E1	1571	broad.mit.edu	37	10	135371432	135371432	+	3'UTR	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP3A43	64816	broad.mit.edu	37	7	99457447	99457447	+	Intron	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP3A4	1576	broad.mit.edu	37	7	99363898	99363898	+	Intron	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP4Z1	199974	broad.mit.edu	37	1	47533119	47533119	+	5'Flank	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYTSA	23384	broad.mit.edu	37	22	24724886	24724886	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYTSB	92521	broad.mit.edu	37	17	20108353	20108353	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAB1	1600	broad.mit.edu	37	1	57481056	57481056	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAB2IP	153090	broad.mit.edu	37	9	124526082	124526082	+	Missense_Mutation	SNP	G	A	A	rs141706892	byFrequency	TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAB2	1601	broad.mit.edu	37	5	39377209	39377209	+	Silent	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DACH1	1602	broad.mit.edu	37	13	72133870	72133870	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DACT1	51339	broad.mit.edu	37	14	59112833	59112833	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DACT1	51339	broad.mit.edu	37	14	59113737	59113737	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAG1	1605	broad.mit.edu	37	3	49568631	49568631	+	Silent	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAO	1610	broad.mit.edu	37	12	109292333	109292333	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAO	1610	broad.mit.edu	37	12	109292563	109292563	+	Silent	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAPK1	1612	broad.mit.edu	37	9	90263694	90263694	+	Splice_Site	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DARC	2532	broad.mit.edu	37	1	159176165	159176165	+	Silent	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DBF4B	80174	broad.mit.edu	37	17	42824365	42824365	+	Intron	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DBF4	10926	broad.mit.edu	37	7	87514502	87514502	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DBN1	1627	broad.mit.edu	37	5	176894443	176894443	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF12L2	340578	broad.mit.edu	37	X	125298568	125298568	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF12L2	340578	broad.mit.edu	37	X	125298619	125298619	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF12L2	340578	broad.mit.edu	37	X	125299290	125299290	+	Silent	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF5	8816	broad.mit.edu	37	14	69541945	69541945	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF8L1	139425	broad.mit.edu	37	X	27997759	27997759	+	Nonsense_Mutation	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF8	50717	broad.mit.edu	37	1	160209920	160209920	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF8	50717	broad.mit.edu	37	1	160209950	160209950	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCC	1630	broad.mit.edu	37	18	50432464	50432464	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCC	1630	broad.mit.edu	37	18	50994463	50994463	+	Intron	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCDC1	341019	broad.mit.edu	37	11	31312225	31312225	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCTN4	51164	broad.mit.edu	37	5	150138538	150138538	+	Silent	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDAH2	23564	broad.mit.edu	37	6	31695231	31695231	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDI1	414301	broad.mit.edu	37	11	103907482	103907482	+	5'UTR	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDI2	84301	broad.mit.edu	37	1	15959945	15959945	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX18	8886	broad.mit.edu	37	2	118583274	118583274	+	Intron	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX26B	203522	broad.mit.edu	37	X	134683449	134683449	+	Intron	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX3X	1654	broad.mit.edu	37	X	41202624	41202624	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX60L	91351	broad.mit.edu	37	4	169337907	169337907	+	Silent	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEDD	9191	broad.mit.edu	37	1	161094006	161094006	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEFB136	613210	broad.mit.edu	37	8	11831804	11831804	+	Intron	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND1B	163486	broad.mit.edu	37	1	197659335	197659335	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND1C	79958	broad.mit.edu	37	19	6477285	6477285	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND5B	160518	broad.mit.edu	37	12	31632706	31632706	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEPDC5	9681	broad.mit.edu	37	22	32200742	32200742	+	Intron	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKE	8526	broad.mit.edu	37	17	54939215	54939215	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKH	160851	broad.mit.edu	37	13	42769083	42769083	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKI	9162	broad.mit.edu	37	7	137172361	137172361	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKI	9162	broad.mit.edu	37	7	137263044	137263044	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHRS3	9249	broad.mit.edu	37	1	12677392	12677392	+	5'UTR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHRSX	207063	broad.mit.edu	37	X	2209448	2209448	+	Intron	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX37	57647	broad.mit.edu	37	12	125449018	125449018	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DICER1	23405	broad.mit.edu	37	14	95571475	95571475	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLGAP1	9229	broad.mit.edu	37	18	3729256	3729256	+	Silent	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLGAP1	9229	broad.mit.edu	37	18	3879293	3879293	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMBT1	1755	broad.mit.edu	37	10	124330323	124330323	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMBT1	1755	broad.mit.edu	37	10	124402585	124402585	+	Intron	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMD	1756	broad.mit.edu	37	X	32235069	32235069	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMD	1756	broad.mit.edu	37	X	32632366	32632366	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMRTA1	63951	broad.mit.edu	37	9	22447651	22447651	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMRTA1	63951	broad.mit.edu	37	9	22451687	22451687	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMRTA1	63951	broad.mit.edu	37	9	22451693	22451693	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH10	196385	broad.mit.edu	37	12	124416667	124416667	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH1	25981	broad.mit.edu	37	3	52427383	52427383	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH2	146754	broad.mit.edu	37	17	7736826	7736826	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH3	55567	broad.mit.edu	37	16	21042353	21042353	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11513788	11513788	+	Silent	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11593607	11593609	+	In_Frame_Del	DEL	TTC	-	-			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11687034	11687034	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11725916	11725916	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11737902	11737902	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11865225	11865225	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAI2	64446	broad.mit.edu	37	17	72301377	72301377	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC1	64215	broad.mit.edu	37	10	22217307	22217307	+	Intron	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC6	9829	broad.mit.edu	37	1	65831778	65831778	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC6	9829	broad.mit.edu	37	1	65852408	65852408	+	Intron	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNHD1	144132	broad.mit.edu	37	11	6530210	6530210	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK10	55619	broad.mit.edu	37	2	225662741	225662741	+	Intron	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK11	139818	broad.mit.edu	37	X	117712558	117712558	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK2	1794	broad.mit.edu	37	5	169098052	169098052	+	Intron	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK2	1794	broad.mit.edu	37	5	169138802	169138802	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK8	81704	broad.mit.edu	37	9	464110	464110	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK9	23348	broad.mit.edu	37	13	99537282	99537282	+	Silent	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPH2	1802	broad.mit.edu	37	1	44437304	44437304	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPM1	8813	broad.mit.edu	37	20	49562404	49562404	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP10	57628	broad.mit.edu	37	2	116101469	116101469	+	Silent	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP6	1804	broad.mit.edu	37	7	154519683	154519683	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPYSL4	10570	broad.mit.edu	37	10	134015467	134015467	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPYS	1807	broad.mit.edu	37	8	105405087	105405087	+	Silent	SNP	C	G	G	rs35670436		TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DRD2	1813	broad.mit.edu	37	11	113285144	113285144	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DRD3	1814	broad.mit.edu	37	3	113850212	113850212	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DRD5	1816	broad.mit.edu	37	4	9783983	9783983	+	Silent	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DRD5	1816	broad.mit.edu	37	4	9784742	9784742	+	Silent	SNP	C	A	A	rs143226097		TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSCAML1	57453	broad.mit.edu	37	11	117309726	117309726	+	Intron	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSCAM	1826	broad.mit.edu	37	21	41683921	41683921	+	Intron	SNP	A	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSG4	147409	broad.mit.edu	37	18	28986392	28986392	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSTYK	25778	broad.mit.edu	37	1	205171763	205171764	+	Intron	DNP	CC	AA	AA			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DST	667	broad.mit.edu	37	6	56328462	56328462	+	Silent	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DST	667	broad.mit.edu	37	6	56472827	56472827	+	Intron	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DTX4	23220	broad.mit.edu	37	11	58959804	58959804	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP13	51207	broad.mit.edu	37	10	76861637	76861637	+	3'UTR	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP15	128853	broad.mit.edu	37	20	30436654	30436654	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP27	92235	broad.mit.edu	37	1	167095143	167095143	+	Silent	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DVL2	1856	broad.mit.edu	37	17	7133956	7133956	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYDC2	84332	broad.mit.edu	37	10	82126743	82126743	+	3'UTR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNC1I1	1780	broad.mit.edu	37	7	95657491	95657491	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYSF	8291	broad.mit.edu	37	2	71788954	71788954	+	Silent	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYSF	8291	broad.mit.edu	37	2	71840560	71840560	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DZIP1	22873	broad.mit.edu	37	13	96239874	96239874	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EAF1	85403	broad.mit.edu	37	3	15480598	15480599	+	Intron	INS	-	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EBF1	1879	broad.mit.edu	37	5	158223322	158223322	+	Intron	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EBI3	10148	broad.mit.edu	37	19	4236894	4236894	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ECM2	1842	broad.mit.edu	37	9	95285118	95285118	+	Silent	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFCAB10	100130771	broad.mit.edu	37	7	105223391	105223391	+	5'Flank	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFCAB1	79645	broad.mit.edu	37	8	49642328	49642328	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFEMP2	30008	broad.mit.edu	37	11	65637571	65637571	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGFL6	25975	broad.mit.edu	37	X	13636140	13636140	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGFL8	80864	broad.mit.edu	37	6	32135410	32135410	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGLN3	112399	broad.mit.edu	37	14	34419597	34419597	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EHBP1	23301	broad.mit.edu	37	2	63182783	63182783	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF2S3	1968	broad.mit.edu	37	X	24089624	24089624	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF5B	9669	broad.mit.edu	37	2	99999328	99999328	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELAVL2	1993	broad.mit.edu	37	9	23692662	23692662	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELAVL3	1995	broad.mit.edu	37	19	11565622	11565622	+	Silent	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELAVL4	1996	broad.mit.edu	37	1	50610800	50610800	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELF2	1998	broad.mit.edu	37	4	140035961	140035961	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELN	2006	broad.mit.edu	37	7	73462781	73462781	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELTD1	64123	broad.mit.edu	37	1	79403913	79403913	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EMCN	51705	broad.mit.edu	37	4	101331438	101331438	+	Splice_Site	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EMD	2010	broad.mit.edu	37	X	153609423	153609423	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EMILIN1	11117	broad.mit.edu	37	2	27301983	27301983	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EML4	27436	broad.mit.edu	37	2	42472648	42472648	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EMR1	2015	broad.mit.edu	37	19	6898526	6898526	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EMR1	2015	broad.mit.edu	37	19	6921922	6921922	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EN2	2020	broad.mit.edu	37	7	155255288	155255288	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENGASE	64772	broad.mit.edu	37	17	77078168	77078168	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENOX1	55068	broad.mit.edu	37	13	43918814	43918814	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENTPD4	9583	broad.mit.edu	37	8	23297285	23297285	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EP400	57634	broad.mit.edu	37	12	132466997	132466997	+	Missense_Mutation	SNP	G	T	T	rs147503869		TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EP400	57634	broad.mit.edu	37	12	132476984	132476984	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB41L3	23136	broad.mit.edu	37	18	5410567	5410567	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB49	2039	broad.mit.edu	37	8	21938046	21938046	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB49	2039	broad.mit.edu	37	8	21938457	21938457	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPC1	80314	broad.mit.edu	37	10	32594623	32594623	+	Intron	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA3	2042	broad.mit.edu	37	3	89176389	89176389	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA3	2042	broad.mit.edu	37	3	89259253	89259253	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA3	2042	broad.mit.edu	37	3	89390098	89390098	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA3	2042	broad.mit.edu	37	3	89445177	89445177	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA3	2042	broad.mit.edu	37	3	89478186	89478186	+	Intron	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA4	2043	broad.mit.edu	37	2	222428959	222428960	+	Frame_Shift_Ins	INS	-	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA5	2044	broad.mit.edu	37	4	66213885	66213885	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA5	2044	broad.mit.edu	37	4	66213941	66213941	+	Intron	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA5	2044	broad.mit.edu	37	4	66439851	66439851	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA6	285220	broad.mit.edu	37	3	97329697	97329697	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA7	2045	broad.mit.edu	37	6	93956565	93956565	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA7	2045	broad.mit.edu	37	6	93964499	93964499	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB1	2047	broad.mit.edu	37	3	134960228	134960228	+	Intron	SNP	A	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB1	2047	broad.mit.edu	37	3	134967314	134967314	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPS8L2	64787	broad.mit.edu	37	11	726431	726431	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPS8L3	79574	broad.mit.edu	37	1	110294767	110294767	+	Silent	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPS8L3	79574	broad.mit.edu	37	1	110300460	110300460	+	Silent	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERBB2	2064	broad.mit.edu	37	17	37865979	37865979	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERBB4	2066	broad.mit.edu	37	2	212589838	212589838	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERBB4	2066	broad.mit.edu	37	2	212812268	212812268	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERCC5	2073	broad.mit.edu	37	13	103528219	103528219	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERN1	2081	broad.mit.edu	37	17	62142648	62142648	+	Splice_Site	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESCO1	114799	broad.mit.edu	37	18	19146258	19146258	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESPN	83715	broad.mit.edu	37	1	6505714	6505714	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESR1	2099	broad.mit.edu	37	6	152382262	152382262	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESRRB	2103	broad.mit.edu	37	14	76905865	76905865	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ETFB	2109	broad.mit.edu	37	19	51857775	51857775	+	Intron	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ETV3L	440695	broad.mit.edu	37	1	157068577	157068577	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EVC2	132884	broad.mit.edu	37	4	5664911	5664911	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EVC	2121	broad.mit.edu	37	4	5721080	5721080	+	Nonsense_Mutation	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EYS	346007	broad.mit.edu	37	6	66054071	66054071	+	Splice_Site	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F13A1	2162	broad.mit.edu	37	6	6250928	6250928	+	Intron	DEL	A	-	-			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F2RL2	2151	broad.mit.edu	37	5	75914019	75914019	+	Silent	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F2	2147	broad.mit.edu	37	11	46760790	46760790	+	Intron	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F8	2157	broad.mit.edu	37	X	154212800	154212800	+	Intron	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM102B	284611	broad.mit.edu	37	1	109103201	109103201	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM108B1	51104	broad.mit.edu	37	9	74490030	74490030	+	Intron	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM109A	144717	broad.mit.edu	37	12	111801145	111801145	+	Silent	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM115C	285966	broad.mit.edu	37	7	143421773	143421773	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM118A	55007	broad.mit.edu	37	22	45728740	45728740	+	Intron	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM120B	84498	broad.mit.edu	37	6	170697491	170697491	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM123B	139285	broad.mit.edu	37	X	63411300	63411300	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM129B	64855	broad.mit.edu	37	9	130279139	130279139	+	Silent	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM131A	131408	broad.mit.edu	37	3	184059582	184059582	+	5'UTR	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM158A	51016	broad.mit.edu	37	14	24608594	24608594	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM180A	389558	broad.mit.edu	37	7	135419169	135419169	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM184A	79632	broad.mit.edu	37	6	119327671	119327671	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM186B	84070	broad.mit.edu	37	12	49993982	49993982	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM189A1	23359	broad.mit.edu	37	15	29526295	29526295	+	Intron	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM19A1	407738	broad.mit.edu	37	3	68194707	68194707	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM19A2	338811	broad.mit.edu	37	12	62273611	62273611	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM21C	253725	broad.mit.edu	37	10	46280912	46280912	+	Intron	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM3C	10447	broad.mit.edu	37	7	121011399	121011399	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM40B	57464	broad.mit.edu	37	7	129083837	129083837	+	Intron	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM45B	55855	broad.mit.edu	37	X	129629533	129629533	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM47A	158724	broad.mit.edu	37	X	34147933	34147933	+	3'UTR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM47C	442444	broad.mit.edu	37	X	37027370	37027370	+	Frame_Shift_Del	DEL	G	-	-	rs140151778	byFrequency	TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM48B1	100130302	broad.mit.edu	37	X	24382802	24382802	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM5B	57795	broad.mit.edu	37	1	177247898	177247898	+	Silent	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM5C	339479	broad.mit.edu	37	1	190203494	190203494	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM71C	196472	broad.mit.edu	37	12	100042480	100042480	+	Silent	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM73B	84895	broad.mit.edu	37	9	131831427	131831427	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM75A6	389730	broad.mit.edu	37	9	43627804	43627804	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM82A1	151393	broad.mit.edu	37	2	38224703	38224703	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM86D	692099	broad.mit.edu	37	3	75475523	75475523	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM9A	171482	broad.mit.edu	37	X	8761700	8761700	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM9B	171483	broad.mit.edu	37	X	9001089	9001089	+	5'UTR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FANCB	2187	broad.mit.edu	37	X	14883071	14883071	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FANCI	55215	broad.mit.edu	37	15	89807159	89807159	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FARP2	9855	broad.mit.edu	37	2	242407608	242407608	+	Silent	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FASTKD3	79072	broad.mit.edu	37	5	7862791	7862791	+	Intron	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT3	120114	broad.mit.edu	37	11	92087844	92087844	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT3	120114	broad.mit.edu	37	11	92533467	92533467	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT4	79633	broad.mit.edu	37	4	126320037	126320037	+	Silent	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT4	79633	broad.mit.edu	37	4	126402752	126402752	+	Silent	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBLN2	2199	broad.mit.edu	37	3	13669343	13669343	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN1	2200	broad.mit.edu	37	15	48766841	48766841	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN2	2201	broad.mit.edu	37	5	127704739	127704739	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBP2	8789	broad.mit.edu	37	9	97355924	97355924	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXL20	84961	broad.mit.edu	37	17	37457329	37457329	+	Splice_Site	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXL4	26235	broad.mit.edu	37	6	99322095	99322095	+	3'UTR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXL4	26235	broad.mit.edu	37	6	99365615	99365615	+	Intron	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO42	54455	broad.mit.edu	37	1	16577152	16577152	+	3'UTR	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO8	26269	broad.mit.edu	37	4	175180760	175180760	+	Intron	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCGR1C	100132417	broad.mit.edu	37	1	149375328	149375328	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCN1	2219	broad.mit.edu	37	9	137808186	137808186	+	Intron	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRL2	79368	broad.mit.edu	37	1	157737207	157737207	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRL4	83417	broad.mit.edu	37	1	157566160	157566160	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRL5	83416	broad.mit.edu	37	1	157497606	157497606	+	Silent	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FER	2241	broad.mit.edu	37	5	108523025	108523025	+	Intron	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGD3	89846	broad.mit.edu	37	9	95778063	95778063	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGD5	152273	broad.mit.edu	37	3	14939048	14939048	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGFR2	2263	broad.mit.edu	37	10	123246893	123246893	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FHL1	2273	broad.mit.edu	37	X	135289128	135289128	+	Intron	DEL	C	-	-			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FIGNL1	63979	broad.mit.edu	37	7	50514648	50514648	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FKBP3	2287	broad.mit.edu	37	14	45603511	45603511	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FKBP6	8468	broad.mit.edu	37	7	72708303	72708303	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ25363	401082	broad.mit.edu	37	3	109190287	109190287	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ43860	389690	broad.mit.edu	37	8	142500188	142500188	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ43950	347127	broad.mit.edu	37	9	84528438	84528438	+	5'UTR	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ44082	389762	broad.mit.edu	37	9	84564728	84564728	+	3'UTR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ46321	389763	broad.mit.edu	37	9	84606380	84606380	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLNC	2318	broad.mit.edu	37	7	128497168	128497168	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLT1	2321	broad.mit.edu	37	13	29001803	29001803	+	Intron	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLT3	2322	broad.mit.edu	37	13	28608431	28608431	+	Intron	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLT4	2324	broad.mit.edu	37	5	180048536	180048536	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLT4	2324	broad.mit.edu	37	5	180058781	180058781	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMN2	56776	broad.mit.edu	37	1	240256749	240256749	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMN2	56776	broad.mit.edu	37	1	240492626	240492626	+	Intron	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMN2	56776	broad.mit.edu	37	1	240555840	240555840	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMNL2	114793	broad.mit.edu	37	2	153492934	153492934	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMO4	2329	broad.mit.edu	37	1	171310527	171310527	+	Intron	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FN1	2335	broad.mit.edu	37	2	216284006	216284007	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FNTB	2342	broad.mit.edu	37	14	65417199	65417199	+	Intron	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOLH1B	219595	broad.mit.edu	37	11	89395380	89395380	+	5'UTR	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXK2	3607	broad.mit.edu	37	17	80478022	80478022	+	Silent	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXM1	2305	broad.mit.edu	37	12	2974399	2974399	+	Intron	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXM1	2305	broad.mit.edu	37	12	2974536	2974536	+	Silent	SNP	G	T	T	rs140831441		TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXO1	2308	broad.mit.edu	37	13	41134699	41134699	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXO4	4303	broad.mit.edu	37	X	70321310	70321310	+	Silent	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXP1	27086	broad.mit.edu	37	3	71161915	71161915	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXP2	93986	broad.mit.edu	37	7	114302190	114302190	+	Nonsense_Mutation	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXR2	139628	broad.mit.edu	37	X	55651039	55651039	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FREM2	341640	broad.mit.edu	37	13	39425876	39425876	+	Frame_Shift_Del	DEL	C	-	-			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRG2	448831	broad.mit.edu	37	4	190947568	190947568	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMPD1	22844	broad.mit.edu	37	9	37745322	37745322	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMPD4	9758	broad.mit.edu	37	X	12708279	12708279	+	Intron	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRRS1	391059	broad.mit.edu	37	1	100174799	100174799	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRZB	2487	broad.mit.edu	37	2	183707257	183707257	+	Nonsense_Mutation	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FURIN	5045	broad.mit.edu	37	15	91423351	91423351	+	Silent	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FUT9	10690	broad.mit.edu	37	6	96651104	96651104	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FZD1	8321	broad.mit.edu	37	7	90895652	90895652	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRA1	2554	broad.mit.edu	37	5	161309524	161309524	+	Intron	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRA5	2558	broad.mit.edu	37	15	27185194	27185194	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRA6	2559	broad.mit.edu	37	5	161114047	161114047	+	Intron	DEL	G	-	-			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRG2	2566	broad.mit.edu	37	5	161528204	161528204	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRG3	2567	broad.mit.edu	37	15	27725783	27725783	+	Intron	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRG3	2567	broad.mit.edu	37	15	27777962	27777962	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRQ	55879	broad.mit.edu	37	X	151820151	151820151	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAD2	2572	broad.mit.edu	37	10	26582030	26582030	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAK	2580	broad.mit.edu	37	4	845702	845702	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAL3ST4	79690	broad.mit.edu	37	7	99764020	99764020	+	Intron	SNP	G	T	T	rs34947102		TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALC	2581	broad.mit.edu	37	14	88454442	88454442	+	Intron	DEL	G	-	-			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT13	114805	broad.mit.edu	37	2	154996817	154996817	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALT	2592	broad.mit.edu	37	9	34648701	34648701	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAS8	2622	broad.mit.edu	37	16	90104182	90104182	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GATA1	2623	broad.mit.edu	37	X	48649677	48649678	+	Missense_Mutation	DNP	CC	AT	AT			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GATA1	2623	broad.mit.edu	37	X	48650666	48650666	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GBP1	2633	broad.mit.edu	37	1	89523879	89523879	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCM2	9247	broad.mit.edu	37	6	10877347	10877347	+	Intron	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCN1L1	10985	broad.mit.edu	37	12	120576189	120576189	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCN1L1	10985	broad.mit.edu	37	12	120586150	120586150	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCOM1	145781	broad.mit.edu	37	15	57976837	57976837	+	3'UTR	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GDA	9615	broad.mit.edu	37	9	74810383	74810383	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GDA	9615	broad.mit.edu	37	9	74810461	74810461	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GEN1	348654	broad.mit.edu	37	2	17947914	17947915	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GFM1	85476	broad.mit.edu	37	3	158402501	158402501	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GFPT1	2673	broad.mit.edu	37	2	69565521	69565521	+	Intron	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GFRA3	2676	broad.mit.edu	37	5	137609997	137609997	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GGT7	2686	broad.mit.edu	37	20	33440304	33440304	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GHR	2690	broad.mit.edu	37	5	42467211	42467211	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GHR	2690	broad.mit.edu	37	5	42688847	42688847	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GIMAP4	55303	broad.mit.edu	37	7	150269586	150269586	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GK	2710	broad.mit.edu	37	X	30714283	30714283	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLDC	2731	broad.mit.edu	37	9	6535940	6535940	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLDC	2731	broad.mit.edu	37	9	6610298	6610298	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLG1	2734	broad.mit.edu	37	16	74537693	74537693	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLI2	2736	broad.mit.edu	37	2	121708923	121708923	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLI3	2737	broad.mit.edu	37	7	42004503	42004503	+	Missense_Mutation	SNP	C	A	A	rs142696576		TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLI3	2737	broad.mit.edu	37	7	42018079	42018079	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLRA1	2741	broad.mit.edu	37	5	151271897	151271897	+	Silent	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLRA2	2742	broad.mit.edu	37	X	14599223	14599223	+	Intron	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLRA2	2742	broad.mit.edu	37	X	14599449	14599449	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GMIP	51291	broad.mit.edu	37	19	19752737	19752737	+	Intron	DEL	C	-	-			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNAO1	2775	broad.mit.edu	37	16	56226147	56226147	+	5'UTR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNAO1	2775	broad.mit.edu	37	16	56377894	56377894	+	3'UTR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNB4	59345	broad.mit.edu	37	3	179138615	179138615	+	Intron	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNGT2	2793	broad.mit.edu	37	17	47284633	47284633	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLGA8E	390535	broad.mit.edu	37	15	23434937	23434937	+	5'Flank	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLGB1	2804	broad.mit.edu	37	3	121395673	121395673	+	Intron	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GP2	2813	broad.mit.edu	37	16	20337593	20337593	+	Intron	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPAT2	150763	broad.mit.edu	37	2	96688033	96688033	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPC5	2262	broad.mit.edu	37	13	92560079	92560079	+	Intron	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPC6	10082	broad.mit.edu	37	13	94482694	94482694	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPC6	10082	broad.mit.edu	37	13	94958127	94958127	+	Intron	SNP	A	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPD1L	23171	broad.mit.edu	37	3	32201069	32201069	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPD2	2820	broad.mit.edu	37	2	157369881	157369881	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPM6A	2823	broad.mit.edu	37	4	176561209	176561209	+	Intron	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR101	83550	broad.mit.edu	37	X	136113727	136113727	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR107	57720	broad.mit.edu	37	9	132861768	132861768	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR112	139378	broad.mit.edu	37	X	135431491	135431491	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR112	139378	broad.mit.edu	37	X	135431527	135431527	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR112	139378	broad.mit.edu	37	X	135432390	135432390	+	Silent	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR112	139378	broad.mit.edu	37	X	135487954	135487954	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR114	221188	broad.mit.edu	37	16	57596920	57596920	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR123	84435	broad.mit.edu	37	10	134896297	134896297	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR137B	7107	broad.mit.edu	37	1	236343209	236343209	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR141	353345	broad.mit.edu	37	7	37780395	37780395	+	Missense_Mutation	SNP	G	A	A	rs146912152	byFrequency	TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR148	344561	broad.mit.edu	37	2	131487073	131487073	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR149	344758	broad.mit.edu	37	3	154139069	154139069	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR158	57512	broad.mit.edu	37	10	25701167	25701167	+	Intron	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR158	57512	broad.mit.edu	37	10	25886710	25886710	+	Frame_Shift_Del	DEL	A	-	-			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR171	29909	broad.mit.edu	37	3	150916837	150916837	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR172B	55065	broad.mit.edu	37	17	4937880	4937880	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR64	10149	broad.mit.edu	37	X	19028713	19028713	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR98	84059	broad.mit.edu	37	5	89924545	89924545	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR98	84059	broad.mit.edu	37	5	89938559	89938559	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRAMD1B	57476	broad.mit.edu	37	11	123431746	123431746	+	Intron	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRAMD1C	54762	broad.mit.edu	37	3	113604230	113604230	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRAMD1C	54762	broad.mit.edu	37	3	113638739	113638739	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRAMD3	65983	broad.mit.edu	37	5	125805302	125805303	+	Intron	DNP	GG	TT	TT			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GREB1	9687	broad.mit.edu	37	2	11696629	11696629	+	5'UTR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRHL2	79977	broad.mit.edu	37	8	102649250	102649250	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRHL3	57822	broad.mit.edu	37	1	24664340	24664340	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIA2	2891	broad.mit.edu	37	4	158256804	158256804	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIA3	2892	broad.mit.edu	37	X	122562059	122562059	+	Intron	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRID1	2894	broad.mit.edu	37	10	87406931	87406931	+	Intron	SNP	A	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRID2	2895	broad.mit.edu	37	4	94344030	94344030	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIK3	2899	broad.mit.edu	37	1	37319186	37319186	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIK4	2900	broad.mit.edu	37	11	120702643	120702643	+	Silent	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIN1	2902	broad.mit.edu	37	9	140059565	140059565	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIN1	2902	broad.mit.edu	37	9	140059821	140059821	+	Intron	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIN2B	2904	broad.mit.edu	37	12	13715993	13715993	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIP1	23426	broad.mit.edu	37	12	66788145	66788145	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM3	2913	broad.mit.edu	37	7	86394889	86394889	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM5	2915	broad.mit.edu	37	11	88742218	88742218	+	Intron	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM7	2917	broad.mit.edu	37	3	7188146	7188146	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRXCR1	389207	broad.mit.edu	37	4	42895198	42895198	+	5'Flank	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSTZ1	2954	broad.mit.edu	37	14	77796651	77796651	+	Splice_Site	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTDC1	79712	broad.mit.edu	37	2	144966223	144966223	+	Silent	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTDC1	79712	broad.mit.edu	37	2	144966234	144966234	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF2E1	2960	broad.mit.edu	37	3	120489701	120489701	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF2IRD2P1	401375	broad.mit.edu	37	7	72662543	72662543	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF3C1	2975	broad.mit.edu	37	16	27506661	27506661	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF3C2	2976	broad.mit.edu	37	2	27552213	27552213	+	Intron	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTPBP3	84705	broad.mit.edu	37	19	17449643	17449643	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUCY1A2	2977	broad.mit.edu	37	11	106856728	106856728	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUF1	60558	broad.mit.edu	37	4	44693729	44693729	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUSBL2	375513	broad.mit.edu	37	6	58285324	58285324	+	Silent	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GXYLT1	283464	broad.mit.edu	37	12	42499723	42499724	+	Missense_Mutation	DNP	CC	AT	AT			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GYG2	8908	broad.mit.edu	37	X	2773196	2773196	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAO1	54363	broad.mit.edu	37	20	7894818	7894818	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAS2	3037	broad.mit.edu	37	8	122629215	122629215	+	Intron	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAUS5	23354	broad.mit.edu	37	19	36113710	36113710	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAVCR1	26762	broad.mit.edu	37	5	156482498	156482498	+	Silent	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HBB	3043	broad.mit.edu	37	11	5247008	5247008	+	Intron	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HBB	3043	broad.mit.edu	37	11	5247887	5247887	+	Missense_Mutation	SNP	G	T	T	rs33918483		TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HBB	3043	broad.mit.edu	37	11	5248060	5248060	+	Intron	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HBG1	3047	broad.mit.edu	37	11	5269692	5269692	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HBG2	3048	broad.mit.edu	37	11	5274610	5274610	+	Intron	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HBG2	3048	broad.mit.edu	37	11	5275443	5275443	+	Intron	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HCFC1	3054	broad.mit.edu	37	X	153227639	153227639	+	Intron	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HCLS1	3059	broad.mit.edu	37	3	121366029	121366029	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HCN1	348980	broad.mit.edu	37	5	45267278	45267278	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HCRTR2	3062	broad.mit.edu	37	6	55145149	55145149	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC4	9759	broad.mit.edu	37	2	239974810	239974810	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC8	55869	broad.mit.edu	37	X	71787454	71787454	+	Intron	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDDC2	51020	broad.mit.edu	37	6	125621627	125621627	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDLBP	3069	broad.mit.edu	37	2	242169568	242169568	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR4	399671	broad.mit.edu	37	14	73980718	73980718	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR5A	25938	broad.mit.edu	37	14	31852721	31852721	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR7B2	133558	broad.mit.edu	37	5	41042216	41042216	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HECTD2	143279	broad.mit.edu	37	10	93247544	93247544	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HECW2	57520	broad.mit.edu	37	2	197187323	197187323	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEPH	9843	broad.mit.edu	37	X	65414908	65414908	+	Intron	SNP	C	T	T	rs148357949	by1000genomes	TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEPH	9843	broad.mit.edu	37	X	65474859	65474859	+	Intron	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC1	8925	broad.mit.edu	37	15	64045285	64045285	+	Splice_Site	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC2P2	400322	broad.mit.edu	37	15	23300072	23300072	+	RNA	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC6	55008	broad.mit.edu	37	4	89304405	89304405	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HGF	3082	broad.mit.edu	37	7	81355281	81355281	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HHATL	57467	broad.mit.edu	37	3	42734518	42734518	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST3H2A	92815	broad.mit.edu	37	1	228645071	228645071	+	3'UTR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HLTF	6596	broad.mit.edu	37	3	148766766	148766766	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HLTF	6596	broad.mit.edu	37	3	148782774	148782774	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HM13	81502	broad.mit.edu	37	20	30138026	30138026	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMMR	3161	broad.mit.edu	37	5	162918060	162918060	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOOK3	84376	broad.mit.edu	37	8	42852763	42852763	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HPCAL4	51440	broad.mit.edu	37	1	40149794	40149794	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRNR	388697	broad.mit.edu	37	1	152192040	152192040	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HS3ST4	9951	broad.mit.edu	37	16	26044029	26044029	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HS6ST3	266722	broad.mit.edu	37	13	96743087	96743087	+	5'Flank	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSD3B2	3284	broad.mit.edu	37	1	119981573	119981573	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSD3B2	3284	broad.mit.edu	37	1	119987964	119987964	+	3'UTR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSF2BP	11077	broad.mit.edu	37	21	44949598	44949598	+	3'UTR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSF5	124535	broad.mit.edu	37	17	56540405	56540405	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSFX2	100130086	broad.mit.edu	37	X	148839588	148839588	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPA13	6782	broad.mit.edu	37	21	15753637	15753637	+	Missense_Mutation	SNP	C	A	A	rs140867763		TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPA13	6782	broad.mit.edu	37	21	15753872	15753872	+	Intron	DEL	A	-	-			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPB2	3316	broad.mit.edu	37	11	111784229	111784229	+	Silent	SNP	C	G	G	rs4252588	byFrequency;by1000genomes	TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTATIP2	10553	broad.mit.edu	37	11	20398289	20398289	+	Intron	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR1D	3352	broad.mit.edu	37	1	23520676	23520676	+	Nonsense_Mutation	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR3B	9177	broad.mit.edu	37	11	113816739	113816739	+	Silent	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR3C	170572	broad.mit.edu	37	3	183770953	183770953	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR4	3360	broad.mit.edu	37	5	147830873	147830873	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTT	3064	broad.mit.edu	37	4	3174698	3174698	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTT	3064	broad.mit.edu	37	4	3240378	3240378	+	Intron	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HYDIN	54768	broad.mit.edu	37	16	70884249	70884249	+	Intron	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HYDIN	54768	broad.mit.edu	37	16	70955161	70955161	+	Intron	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IBSP	3381	broad.mit.edu	37	4	88731761	88731761	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFI44L	10964	broad.mit.edu	37	1	79107285	79107285	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFNA14	3448	broad.mit.edu	37	9	21231732	21231732	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFNA21	3452	broad.mit.edu	37	9	21166573	21166573	+	Silent	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFNA5	3442	broad.mit.edu	37	9	21304697	21304697	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFNA5	3442	broad.mit.edu	37	9	21305309	21305309	+	5'Flank	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFT140	9742	broad.mit.edu	37	16	1573703	1573703	+	Splice_Site	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFT140	9742	broad.mit.edu	37	16	1608043	1608043	+	Silent	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFT172	26160	broad.mit.edu	37	2	27682470	27682470	+	Intron	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFT57	55081	broad.mit.edu	37	3	107937323	107937323	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFT81	28981	broad.mit.edu	37	12	110628820	110628820	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGF1R	3480	broad.mit.edu	37	15	99442824	99442824	+	Silent	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGF2R	3482	broad.mit.edu	37	6	160482939	160482939	+	Silent	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGFBP7	3490	broad.mit.edu	37	4	57939337	57939337	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGFBPL1	347252	broad.mit.edu	37	9	38414076	38414076	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGFN1	91156	broad.mit.edu	37	1	201196129	201196129	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF1	3547	broad.mit.edu	37	X	130407956	130407956	+	Intron	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF1	3547	broad.mit.edu	37	X	130412980	130412980	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF22	283284	broad.mit.edu	37	11	18735787	18735787	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IKBKE	9641	broad.mit.edu	37	1	206650076	206650076	+	Missense_Mutation	SNP	G	T	T	rs147887008		TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL16	3603	broad.mit.edu	37	15	81578276	81578276	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1RAPL1	11141	broad.mit.edu	37	X	29959658	29959658	+	Intron	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1RL1	9173	broad.mit.edu	37	2	102968097	102968097	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1RN	3557	broad.mit.edu	37	2	113887117	113887117	+	Intron	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL20RB	53833	broad.mit.edu	37	3	136699173	136699173	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL20RB	53833	broad.mit.edu	37	3	136699284	136699284	+	Intron	DEL	C	-	-			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL2	3558	broad.mit.edu	37	4	123377449	123377449	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL6R	3570	broad.mit.edu	37	1	154401785	154401785	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IMMP2L	83943	broad.mit.edu	37	7	110526649	110526649	+	Silent	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INF2	64423	broad.mit.edu	37	14	105170250	105170250	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INPP1	3628	broad.mit.edu	37	2	191224995	191224995	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INPP4B	8821	broad.mit.edu	37	4	143066974	143066974	+	Intron	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INPPL1	3636	broad.mit.edu	37	11	71946456	71946456	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INSC	387755	broad.mit.edu	37	11	15242878	15242879	+	Intron	DNP	GG	TT	TT			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INSRR	3645	broad.mit.edu	37	1	156814347	156814347	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPO7	10527	broad.mit.edu	37	11	9466700	9466700	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPW	3653	broad.mit.edu	37	15	25417790	25417790	+	Intron	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQCG	84223	broad.mit.edu	37	3	197619552	197619552	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQCG	84223	broad.mit.edu	37	3	197670690	197670690	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQCH	64799	broad.mit.edu	37	15	67692483	67692483	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQCJ	654502	broad.mit.edu	37	3	158983083	158983083	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQGAP2	10788	broad.mit.edu	37	5	75954415	75954415	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQUB	154865	broad.mit.edu	37	7	123109248	123109248	+	Intron	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRF6	3664	broad.mit.edu	37	1	209965773	209965773	+	Splice_Site	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA2	3673	broad.mit.edu	37	5	52370967	52370967	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA8	8516	broad.mit.edu	37	10	15655809	15655809	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAE	3682	broad.mit.edu	37	17	3651109	3651109	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAV	3685	broad.mit.edu	37	2	187533638	187533638	+	Silent	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAX	3687	broad.mit.edu	37	16	31371152	31371152	+	Splice_Site	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAX	3687	broad.mit.edu	37	16	31391993	31391993	+	Intron	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGB1BP1	9270	broad.mit.edu	37	2	9552598	9552598	+	Intron	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITIH2	3698	broad.mit.edu	37	10	7750928	7750928	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITIH2	3698	broad.mit.edu	37	10	7750937	7750938	+	Intron	INS	-	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITIH4	3700	broad.mit.edu	37	3	52864568	52864568	+	Intron	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITIH5L	347365	broad.mit.edu	37	X	54783879	54783879	+	Silent	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITM2A	9452	broad.mit.edu	37	X	78618038	78618038	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITPR1	3708	broad.mit.edu	37	3	4685792	4685792	+	Intron	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITPRIP	85450	broad.mit.edu	37	10	106075105	106075105	+	Silent	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITSN1	6453	broad.mit.edu	37	21	35229040	35229040	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JAKMIP1	152789	broad.mit.edu	37	4	6114498	6114498	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JAKMIP2	9832	broad.mit.edu	37	5	146971353	146971353	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JHDM1D	80853	broad.mit.edu	37	7	139791672	139791672	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JPH4	84502	broad.mit.edu	37	14	24040527	24040527	+	Nonsense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JTB	10899	broad.mit.edu	37	1	153949634	153949634	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KANK4	163782	broad.mit.edu	37	1	62704056	62704056	+	Intron	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KANK4	163782	broad.mit.edu	37	1	62739519	62739519	+	Silent	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNA4	3739	broad.mit.edu	37	11	30033267	30033267	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNA4	3739	broad.mit.edu	37	11	30033321	30033321	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNB2	9312	broad.mit.edu	37	8	73848476	73848476	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNE4	23704	broad.mit.edu	37	2	223917758	223917758	+	Silent	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH3	23416	broad.mit.edu	37	12	49937257	49937257	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH3	23416	broad.mit.edu	37	12	49950228	49950228	+	Silent	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH5	27133	broad.mit.edu	37	14	63174404	63174404	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNJ15	3772	broad.mit.edu	37	21	39671148	39671148	+	Intron	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNJ16	3773	broad.mit.edu	37	17	68128937	68128937	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNJ2	3759	broad.mit.edu	37	17	68172385	68172385	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNK10	54207	broad.mit.edu	37	14	88729806	88729806	+	Silent	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNK10	54207	broad.mit.edu	37	14	88729829	88729829	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNK1	3775	broad.mit.edu	37	1	233802492	233802492	+	Silent	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNK9	51305	broad.mit.edu	37	8	140630624	140630624	+	Silent	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNMA1	3778	broad.mit.edu	37	10	78850049	78850049	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNN2	3781	broad.mit.edu	37	5	113740082	113740082	+	Intron	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNQ4	9132	broad.mit.edu	37	1	41249968	41249968	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNT1	57582	broad.mit.edu	37	9	138657096	138657096	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNT2	343450	broad.mit.edu	37	1	196250051	196250051	+	Frame_Shift_Del	DEL	G	-	-			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNT2	343450	broad.mit.edu	37	1	196288558	196288558	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNT2	343450	broad.mit.edu	37	1	196302956	196302956	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNU1	157855	broad.mit.edu	37	8	36703229	36703229	+	Intron	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNV1	27012	broad.mit.edu	37	8	110980547	110980547	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCTD15	79047	broad.mit.edu	37	19	34291379	34291379	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM3A	55818	broad.mit.edu	37	2	86705065	86705096	+	Frame_Shift_Del	DEL	ATCTTCAACCTGCACTGGGTGTGTCCTCGGTG	-	-			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KHDRBS3	10656	broad.mit.edu	37	8	136637767	136637767	+	Intron	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0146	23514	broad.mit.edu	37	8	48626236	48626236	+	Intron	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0494	9813	broad.mit.edu	37	1	47183528	47183528	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0556	23247	broad.mit.edu	37	16	27788219	27788219	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0586	9786	broad.mit.edu	37	14	58955345	58955345	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0649	9858	broad.mit.edu	37	9	138378181	138378181	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0802	23255	broad.mit.edu	37	18	8718689	8718689	+	Intron	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1109	84162	broad.mit.edu	37	4	123264729	123264729	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1211	57482	broad.mit.edu	37	4	57189609	57189609	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1217	56243	broad.mit.edu	37	10	24833392	24833392	+	Silent	SNP	A	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1244	57221	broad.mit.edu	37	6	138599509	138599509	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1409	57578	broad.mit.edu	37	14	94103593	94103593	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1409	57578	broad.mit.edu	37	14	94160683	94160683	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1432	57589	broad.mit.edu	37	9	5753629	5753629	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1462	57608	broad.mit.edu	37	10	30315188	30315188	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1598	57698	broad.mit.edu	37	10	118666150	118666150	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1632	57724	broad.mit.edu	37	18	43438646	43438646	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1755	85449	broad.mit.edu	37	20	36851985	36851985	+	Silent	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1755	85449	broad.mit.edu	37	20	36854101	36854101	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA2022	340533	broad.mit.edu	37	X	73961080	73961080	+	Silent	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA2022	340533	broad.mit.edu	37	X	73962119	73962119	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF13A	63971	broad.mit.edu	37	6	17764426	17764426	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF13A	63971	broad.mit.edu	37	6	17799501	17799501	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF16B	55614	broad.mit.edu	37	20	16359504	16359504	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF1A	547	broad.mit.edu	37	2	241656803	241656803	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF21A	55605	broad.mit.edu	37	12	39726905	39726905	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF25	3834	broad.mit.edu	37	6	168434741	168434741	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF3B	9371	broad.mit.edu	37	20	30919105	30919105	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF4A	24137	broad.mit.edu	37	X	69549445	69549445	+	Intron	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF4A	24137	broad.mit.edu	37	X	69549455	69549455	+	Intron	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF4B	285643	broad.mit.edu	37	5	154393713	154393713	+	Frame_Shift_Del	DEL	G	-	-			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIR2DL1	3802	broad.mit.edu	37	19	55289928	55289928	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIR2DL3	3804	broad.mit.edu	37	19	55253716	55253716	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIR3DL1	3811	broad.mit.edu	37	19	55346480	55346480	+	Intron	SNP	A	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLF8	11279	broad.mit.edu	37	X	56291841	56291841	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL12	59349	broad.mit.edu	37	1	202888819	202888819	+	Intron	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL13	90293	broad.mit.edu	37	X	117033335	117033335	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL14	57565	broad.mit.edu	37	18	30350257	30350257	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL2	11275	broad.mit.edu	37	4	166231976	166231976	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL32	114792	broad.mit.edu	37	6	97423827	97423827	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLKB1	3818	broad.mit.edu	37	4	187177114	187177114	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KPNA4	3840	broad.mit.edu	37	3	160243951	160243951	+	Intron	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KPNA5	3841	broad.mit.edu	37	6	117047556	117047556	+	Intron	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KPNA6	23633	broad.mit.edu	37	1	32635433	32635433	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRAS	3845	broad.mit.edu	37	12	25398284	25398284	+	Missense_Mutation	SNP	C	A	A	rs121913529		TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KREMEN1	83999	broad.mit.edu	37	22	29537988	29537988	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT10	3858	broad.mit.edu	37	17	38976659	38976659	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT24	192666	broad.mit.edu	37	17	38856291	38856291	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT79	338785	broad.mit.edu	37	12	53227808	53227808	+	Silent	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT85	3891	broad.mit.edu	37	12	52758190	52758190	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT85	3891	broad.mit.edu	37	12	52760632	52760632	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT9	3857	broad.mit.edu	37	17	39724160	39724160	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP10-6	386674	broad.mit.edu	37	21	46011562	46011562	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP13-2	337959	broad.mit.edu	37	21	31743941	31743941	+	3'UTR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP13-3	337960	broad.mit.edu	37	21	31797728	31797728	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP21-1	337977	broad.mit.edu	37	21	32127674	32127674	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP21-2	337978	broad.mit.edu	37	21	32119526	32119526	+	5'Flank	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP6-3	337968	broad.mit.edu	37	21	31964926	31964926	+	Silent	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP8-1	337879	broad.mit.edu	37	21	32185575	32185575	+	5'Flank	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KYNU	8942	broad.mit.edu	37	2	143799613	143799613	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
L1CAM	3897	broad.mit.edu	37	X	153133918	153133919	+	Intron	DNP	GG	TT	TT			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
L1CAM	3897	broad.mit.edu	37	X	153134360	153134360	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LACE1	246269	broad.mit.edu	37	6	108843692	108843692	+	3'UTR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMB1	3912	broad.mit.edu	37	7	107580394	107580394	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMB1	3912	broad.mit.edu	37	7	107600208	107600208	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMB4	22798	broad.mit.edu	37	7	107744882	107744882	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMC3	10319	broad.mit.edu	37	9	133942247	133942247	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCE2B	26239	broad.mit.edu	37	1	152659670	152659670	+	3'UTR	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCP1	3936	broad.mit.edu	37	13	46730497	46730497	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCT	3938	broad.mit.edu	37	2	136566002	136566002	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCT	3938	broad.mit.edu	37	2	136594095	136594095	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LDB2	9079	broad.mit.edu	37	4	16504244	16504244	+	3'UTR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LDB2	9079	broad.mit.edu	37	4	16899977	16899977	+	Silent	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LDHC	3948	broad.mit.edu	37	11	18436798	18436798	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LDLRAD3	143458	broad.mit.edu	37	11	36057708	36057708	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEPROTL1	23484	broad.mit.edu	37	8	29975005	29975006	+	Intron	DNP	GG	TT	TT			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEPROT	54741	broad.mit.edu	37	1	65897500	65897500	+	Silent	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGALS13	29124	broad.mit.edu	37	19	40095187	40095187	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGSN	51557	broad.mit.edu	37	6	63990433	63990433	+	Silent	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGSN	51557	broad.mit.edu	37	6	63990808	63990808	+	Silent	SNP	G	T	T	rs146916095		TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LHFPL4	375323	broad.mit.edu	37	3	9594110	9594110	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LHX1	3975	broad.mit.edu	37	17	35298037	35298037	+	Silent	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LHX8	431707	broad.mit.edu	37	1	75596247	75596247	+	Translation_Start_Site	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRA2	11027	broad.mit.edu	37	19	55086873	55086873	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRA5	353514	broad.mit.edu	37	19	54818642	54818642	+	3'UTR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIPC	3990	broad.mit.edu	37	15	58855785	58855785	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMBRD2	92255	broad.mit.edu	37	5	36117869	36117869	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMTK2	22853	broad.mit.edu	37	7	97833440	97833440	+	Silent	SNP	C	A	A	rs137912661		TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC100125556	100125556	broad.mit.edu	37	3	125647455	125647455	+	RNA	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC100129055	100129055	broad.mit.edu	37	10	38484451	38484451	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC100133308	100133308	broad.mit.edu	37	10	45631169	45631169	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC200726	200726	broad.mit.edu	37	2	207509200	207509200	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC285401	285401	broad.mit.edu	37	3	63083086	63083086	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC349196	349196	broad.mit.edu	37	8	7215733	7215733	+	5'Flank	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC387646	387646	broad.mit.edu	37	10	27539347	27539347	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC400759	400759	broad.mit.edu	37	1	89886636	89886636	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC400759	400759	broad.mit.edu	37	1	89889968	89889968	+	RNA	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC442308	442308	broad.mit.edu	37	7	55714502	55714502	+	RNA	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC442459	442459	broad.mit.edu	37	X	98974502	98974502	+	RNA	DEL	C	-	-			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC646813	646813	broad.mit.edu	37	11	50368673	50368673	+	Intron	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC648740	648740	broad.mit.edu	37	1	104113049	104113049	+	5'UTR	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC653786	653786	broad.mit.edu	37	16	22558209	22558209	+	Translation_Start_Site	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC727924	727924	broad.mit.edu	37	15	22297725	22297725	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC731789	731789	broad.mit.edu	37	10	26939550	26939550	+	RNA	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC96610	96610	broad.mit.edu	37	22	22664277	22664277	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LONRF3	79836	broad.mit.edu	37	X	118147002	118147002	+	Silent	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPAL2	80350	broad.mit.edu	37	6	160903769	160903769	+	RNA	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPA	4018	broad.mit.edu	37	6	161022112	161022112	+	Silent	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPCAT1	79888	broad.mit.edu	37	5	1474090	1474090	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPHN1	22859	broad.mit.edu	37	19	14269997	14269997	+	Frame_Shift_Del	DEL	C	-	-			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPHN2	23266	broad.mit.edu	37	1	81969166	81969166	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPHN2	23266	broad.mit.edu	37	1	82447620	82447620	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPPR4	9890	broad.mit.edu	37	1	99753462	99753462	+	Intron	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPPR5	163404	broad.mit.edu	37	1	99380540	99380540	+	Intron	DEL	G	-	-			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRCH2	57631	broad.mit.edu	37	X	114398286	114398286	+	Silent	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRFN5	145581	broad.mit.edu	37	14	42357003	42357003	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP12	29967	broad.mit.edu	37	8	105502807	105502807	+	3'UTR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP12	29967	broad.mit.edu	37	8	105503499	105503499	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP12	29967	broad.mit.edu	37	8	105521317	105521317	+	Intron	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141113847	141113847	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141115763	141115763	+	Intron	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141122277	141122277	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141130580	141130580	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141201790	141201791	+	Intron	DEL	TC	-	-			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141533625	141533625	+	Intron	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141571200	141571200	+	Intron	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1	4035	broad.mit.edu	37	12	57588382	57588382	+	Silent	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP2	4036	broad.mit.edu	37	2	169995231	169995231	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP2	4036	broad.mit.edu	37	2	170090060	170090060	+	Silent	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP2	4036	broad.mit.edu	37	2	170101325	170101325	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRPPRC	10128	broad.mit.edu	37	2	44201548	44201548	+	Intron	SNP	A	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC16B	90668	broad.mit.edu	37	14	24537988	24537988	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC36	55282	broad.mit.edu	37	16	67384227	67384227	+	Intron	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC37B	114659	broad.mit.edu	37	17	30354867	30354867	+	Intron	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC50	123872	broad.mit.edu	37	16	84188285	84188285	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC67	286187	broad.mit.edu	37	8	67925301	67925301	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC69	100130742	broad.mit.edu	37	8	92169564	92169565	+	Intron	DNP	TG	AT	AT			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC7	57554	broad.mit.edu	37	1	70339276	70339276	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC7	57554	broad.mit.edu	37	1	70460378	70460378	+	Intron	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC7	57554	broad.mit.edu	37	1	70493759	70493759	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC7	57554	broad.mit.edu	37	1	70503628	70503628	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC7	57554	broad.mit.edu	37	1	70504590	70504590	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRFIP1	9208	broad.mit.edu	37	2	238642500	238642500	+	Intron	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRIQ3	127255	broad.mit.edu	37	1	74492516	74492516	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRIQ3	127255	broad.mit.edu	37	1	74575175	74575175	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRN3	54674	broad.mit.edu	37	7	110764558	110764558	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LTBP1	4052	broad.mit.edu	37	2	33487838	33487838	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LUZP2	338645	broad.mit.edu	37	11	24784928	24784928	+	Intron	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LY86	9450	broad.mit.edu	37	6	6654824	6654824	+	Silent	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYPD6B	130576	broad.mit.edu	37	2	150071023	150071023	+	Intron	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYPLAL1	127018	broad.mit.edu	37	1	219352503	219352503	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYST	1130	broad.mit.edu	37	1	235840794	235840794	+	Silent	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYST	1130	broad.mit.edu	37	1	235973040	235973040	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYZL4	131375	broad.mit.edu	37	3	42448757	42448757	+	Translation_Start_Site	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYZL6	57151	broad.mit.edu	37	17	34263800	34263800	+	Frame_Shift_Del	DEL	G	-	-			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MACROD2	140733	broad.mit.edu	37	20	14108201	14108201	+	Intron	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEA12	4111	broad.mit.edu	37	X	151896673	151896673	+	RNA	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEA5	4104	broad.mit.edu	37	X	151283160	151283160	+	3'UTR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEB16	139604	broad.mit.edu	37	X	35820219	35820219	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEB1	4112	broad.mit.edu	37	X	30269744	30269744	+	3'UTR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEC1	9947	broad.mit.edu	37	X	140994911	140994911	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEC2	51438	broad.mit.edu	37	X	141291236	141291236	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEC3	139081	broad.mit.edu	37	X	140984185	140984185	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGI1	9223	broad.mit.edu	37	3	65349168	65349168	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGI1	9223	broad.mit.edu	37	3	65416486	65416486	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGI3	260425	broad.mit.edu	37	1	114092319	114092319	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGIX	79917	broad.mit.edu	37	X	49019348	49019348	+	Intron	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAN1A2	10905	broad.mit.edu	37	1	117948254	117948254	+	Silent	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MANBA	4126	broad.mit.edu	37	4	103650920	103650920	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP1B	4131	broad.mit.edu	37	5	71495211	71495211	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP2K3	5606	broad.mit.edu	37	17	21208451	21208451	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP2K4	6416	broad.mit.edu	37	17	12011071	12011071	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP2K5	5607	broad.mit.edu	37	15	68061872	68061872	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP2	4133	broad.mit.edu	37	2	210517893	210517893	+	5'UTR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP2	4133	broad.mit.edu	37	2	210574613	210574613	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K9	4293	broad.mit.edu	37	14	71206862	71206862	+	Silent	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP4K3	8491	broad.mit.edu	37	2	39499673	39499673	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP7	9053	broad.mit.edu	37	6	136709384	136709384	+	Intron	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPK9	5601	broad.mit.edu	37	5	179696251	179696251	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPKAP1	79109	broad.mit.edu	37	9	128305425	128305425	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCH7	64844	broad.mit.edu	37	2	160623873	160623873	+	3'UTR	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARK1	4139	broad.mit.edu	37	1	220823918	220823918	+	Intron	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MASP1	5648	broad.mit.edu	37	3	186937956	186937956	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAST2	23139	broad.mit.edu	37	1	46497868	46497868	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAST4	375449	broad.mit.edu	37	5	66462834	66462834	+	Silent	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MATK	4145	broad.mit.edu	37	19	3783219	3783219	+	Splice_Site	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MATK	4145	broad.mit.edu	37	19	3783287	3783287	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAX	4149	broad.mit.edu	37	14	65543306	65543306	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCAM	4162	broad.mit.edu	37	11	119180620	119180620	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCAM	4162	broad.mit.edu	37	11	119180642	119180642	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCEE	84693	broad.mit.edu	37	2	71351404	71351404	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCF2L	23263	broad.mit.edu	37	13	113742170	113742170	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCF2	4168	broad.mit.edu	37	X	138667243	138667243	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCM2	4171	broad.mit.edu	37	3	127318305	127318305	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCM6	4175	broad.mit.edu	37	2	136626369	136626369	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCOLN2	255231	broad.mit.edu	37	1	85412637	85412637	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCTS1	28985	broad.mit.edu	37	X	119738031	119738031	+	5'UTR	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDGA2	161357	broad.mit.edu	37	14	47600874	47600874	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED12L	116931	broad.mit.edu	37	3	151078344	151078344	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED1	5469	broad.mit.edu	37	17	37566333	37566333	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEF2A	4205	broad.mit.edu	37	15	100173355	100173355	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEF2B	100271849	broad.mit.edu	37	19	19261565	19261565	+	Translation_Start_Site	SNP	G	C	C	rs145308225		TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEFV	4210	broad.mit.edu	37	16	3304165	3304165	+	Silent	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEGF10	84466	broad.mit.edu	37	5	126667056	126667056	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEGF10	84466	broad.mit.edu	37	5	126770409	126770409	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEGF9	1955	broad.mit.edu	37	9	123367492	123367492	+	Silent	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
METT5D1	196074	broad.mit.edu	37	11	28134865	28134865	+	5'UTR	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MFAP4	4239	broad.mit.edu	37	17	19287945	19287945	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MFSD6	54842	broad.mit.edu	37	2	191354474	191354474	+	Intron	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAM	8972	broad.mit.edu	37	7	141750292	141750292	+	Intron	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAT5B	146664	broad.mit.edu	37	17	74928870	74928870	+	Intron	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAT5B	146664	broad.mit.edu	37	17	74942515	74942515	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGC26647	219557	broad.mit.edu	37	7	88423952	88423952	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MID1	4281	broad.mit.edu	37	X	10535287	10535287	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR1324	100302212	broad.mit.edu	37	3	75679928	75679928	+	RNA	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR524	574478	broad.mit.edu	37	19	54214205	54214206	+	5'Flank	DNP	CC	AA	AA			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR592	693177	broad.mit.edu	37	7	126698175	126698175	+	RNA	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR920	100126320	broad.mit.edu	37	12	24365400	24365400	+	RNA	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MKL2	57496	broad.mit.edu	37	16	14294611	14294611	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL2	8085	broad.mit.edu	37	12	49444804	49444804	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL3	58508	broad.mit.edu	37	7	151871326	151871326	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL4	9757	broad.mit.edu	37	19	36223688	36223688	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMEL1	79258	broad.mit.edu	37	1	2523404	2523404	+	Silent	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP16	4325	broad.mit.edu	37	8	89180170	89180170	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP1	4312	broad.mit.edu	37	11	102667943	102667943	+	Intron	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP2	4313	broad.mit.edu	37	16	55539339	55539339	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMRN1	22915	broad.mit.edu	37	4	90872784	90872784	+	Silent	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MNAT1	4331	broad.mit.edu	37	14	61201479	61201479	+	5'UTR	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MNAT1	4331	broad.mit.edu	37	14	61263095	61263095	+	Intron	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOGAT1	116255	broad.mit.edu	37	2	223559869	223559869	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOSC2	54996	broad.mit.edu	37	1	220935067	220935067	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOSPD2	158747	broad.mit.edu	37	X	14932624	14932624	+	Splice_Site	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPDZ	8777	broad.mit.edu	37	9	13112198	13112198	+	Intron	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPP1	4354	broad.mit.edu	37	X	154007498	154007498	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPPED1	758	broad.mit.edu	37	22	43870534	43870534	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPZ	4359	broad.mit.edu	37	1	161275975	161275975	+	Intron	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRAS	22808	broad.mit.edu	37	3	138119351	138119351	+	Intron	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRGPRE	116534	broad.mit.edu	37	11	3249691	3249691	+	Silent	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPL13	28998	broad.mit.edu	37	8	121444404	121444404	+	Intron	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPL44	65080	broad.mit.edu	37	2	224822086	224822086	+	5'Flank	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRRF	92399	broad.mit.edu	37	9	125047614	125047614	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MS4A6A	64231	broad.mit.edu	37	11	59945699	59945699	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MS4A6A	64231	broad.mit.edu	37	11	59949039	59949039	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSH2	4436	broad.mit.edu	37	2	47702164	47702164	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTA2	9219	broad.mit.edu	37	11	62361567	62361567	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTAP	4507	broad.mit.edu	37	9	21930000	21930000	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTHFD1L	25902	broad.mit.edu	37	6	151256325	151256325	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR14	64419	broad.mit.edu	37	3	9710414	9710414	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR15	22909	broad.mit.edu	37	15	31202973	31202973	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR1	8776	broad.mit.edu	37	X	149867531	149867531	+	Intron	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR8	55613	broad.mit.edu	37	X	63564891	63564891	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9000265	9000265	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9002238	9002238	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9027167	9027167	+	Intron	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9047205	9047205	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9068673	9068673	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9089859	9089859	+	Silent	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC17	140453	broad.mit.edu	37	7	100675478	100675478	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC17	140453	broad.mit.edu	37	7	100686002	100686002	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MX2	4600	broad.mit.edu	37	21	42774003	42774003	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MXRA5	25878	broad.mit.edu	37	X	3242456	3242456	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MXRA5	25878	broad.mit.edu	37	X	3261746	3261746	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYBL2	4605	broad.mit.edu	37	20	42343885	42343885	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYBPC1	4604	broad.mit.edu	37	12	102053701	102053701	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYBPC3	4607	broad.mit.edu	37	11	47374044	47374044	+	Intron	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYB	4602	broad.mit.edu	37	6	135507150	135507150	+	Silent	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYEF2	50804	broad.mit.edu	37	15	48441224	48441224	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH13	8735	broad.mit.edu	37	17	10212800	10212800	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH15	22989	broad.mit.edu	37	3	108110903	108110903	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH1	4619	broad.mit.edu	37	17	10399606	10399606	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH1	4619	broad.mit.edu	37	17	10416164	10416164	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH3	4621	broad.mit.edu	37	17	10535202	10535202	+	Silent	SNP	C	A	A	rs111358355		TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH3	4621	broad.mit.edu	37	17	10544585	10544585	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH4	4622	broad.mit.edu	37	17	10348311	10348311	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH4	4622	broad.mit.edu	37	17	10358081	10358081	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH4	4622	broad.mit.edu	37	17	10359123	10359123	+	Intron	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH6	4624	broad.mit.edu	37	14	23852576	23852576	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH7	4625	broad.mit.edu	37	14	23886822	23886822	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH7	4625	broad.mit.edu	37	14	23893391	23893391	+	Intron	DEL	G	-	-			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH8	4626	broad.mit.edu	37	17	10298590	10298590	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH8	4626	broad.mit.edu	37	17	10304708	10304708	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYL2	4633	broad.mit.edu	37	12	111357036	111357036	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYLK3	91807	broad.mit.edu	37	16	46743600	46743600	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO10	4651	broad.mit.edu	37	5	16685846	16685846	+	Splice_Site	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO16	23026	broad.mit.edu	37	13	109364925	109364925	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO16	23026	broad.mit.edu	37	13	109535358	109535358	+	Intron	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO18B	84700	broad.mit.edu	37	22	26164762	26164762	+	Silent	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO19	80179	broad.mit.edu	37	17	34883451	34883451	+	Silent	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO1B	4430	broad.mit.edu	37	2	192278936	192278936	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO1D	4642	broad.mit.edu	37	17	31099937	31099937	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO3A	53904	broad.mit.edu	37	10	26414545	26414545	+	Intron	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO5B	4645	broad.mit.edu	37	18	47365454	47365454	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO7A	4647	broad.mit.edu	37	11	76925117	76925117	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYPN	84665	broad.mit.edu	37	10	69934412	69934412	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYST1	84148	broad.mit.edu	37	16	31131498	31131498	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYT1L	23040	broad.mit.edu	37	2	1906743	1906743	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYT1L	23040	broad.mit.edu	37	2	1920954	1920954	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
N4BP2	55728	broad.mit.edu	37	4	40104082	40104082	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
N4BP2	55728	broad.mit.edu	37	4	40104131	40104131	+	Silent	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAALAD2	10003	broad.mit.edu	37	11	89883659	89883659	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAALADL2	254827	broad.mit.edu	37	3	175164985	175164985	+	Intron	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NALCN	259232	broad.mit.edu	37	13	101710363	101710363	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAP1L2	4674	broad.mit.edu	37	X	72433698	72433698	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAT1	9	broad.mit.edu	37	8	18079725	18079725	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBAS	51594	broad.mit.edu	37	2	15557783	15557783	+	Silent	SNP	A	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF10	100132406	broad.mit.edu	37	1	145281864	145281864	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF10	100132406	broad.mit.edu	37	1	145296388	145296388	+	Nonsense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF10	100132406	broad.mit.edu	37	1	145323815	145323815	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF7	343505	broad.mit.edu	37	1	120381963	120381963	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCAM1	4684	broad.mit.edu	37	11	113103425	113103425	+	Intron	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCF1C	654817	broad.mit.edu	37	7	74582389	74582389	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCOA2	10499	broad.mit.edu	37	8	71038945	71038945	+	Intron	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCOA7	135112	broad.mit.edu	37	6	126236446	126236446	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCRNA00169	400508	broad.mit.edu	37	16	21328200	21328200	+	RNA	DEL	T	-	-			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDST2	8509	broad.mit.edu	37	10	75564658	75564659	+	Intron	INS	-	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDST3	9348	broad.mit.edu	37	4	119026356	119026356	+	Intron	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDUFA10	4705	broad.mit.edu	37	2	240946746	240946746	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDUFA10	4705	broad.mit.edu	37	2	240954195	240954195	+	Silent	SNP	G	A	A	rs148656779		TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDUFA10	4705	broad.mit.edu	37	2	240961674	240961674	+	Silent	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDUFS2	4720	broad.mit.edu	37	1	161183230	161183230	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEBL	10529	broad.mit.edu	37	10	21074853	21074853	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEB	4703	broad.mit.edu	37	2	152432389	152432389	+	Intron	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEGR1	257194	broad.mit.edu	37	1	72400927	72400927	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEIL3	55247	broad.mit.edu	37	4	178272695	178272695	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEK11	79858	broad.mit.edu	37	3	130799236	130799236	+	Intron	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NELL1	4745	broad.mit.edu	37	11	21191311	21191311	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NELL1	4745	broad.mit.edu	37	11	21592381	21592381	+	Silent	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEO1	4756	broad.mit.edu	37	15	73454192	73454192	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NETO1	81832	broad.mit.edu	37	18	70416245	70416245	+	Intron	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NETO1	81832	broad.mit.edu	37	18	70532852	70532852	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NF1P1	440225	broad.mit.edu	37	15	21137625	21137625	+	5'Flank	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFATC3	4775	broad.mit.edu	37	16	68156554	68156554	+	Silent	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFKB1	4790	broad.mit.edu	37	4	103531829	103531829	+	Silent	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NHEDC2	133308	broad.mit.edu	37	4	103978934	103978934	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NHEJ1	79840	broad.mit.edu	37	2	220012365	220012365	+	Intron	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NHSL2	340527	broad.mit.edu	37	X	71264713	71264713	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NHS	4810	broad.mit.edu	37	X	17705957	17705957	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NID1	4811	broad.mit.edu	37	1	236144000	236144000	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NID1	4811	broad.mit.edu	37	1	236180482	236180482	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NID2	22795	broad.mit.edu	37	14	52507389	52507389	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NID2	22795	broad.mit.edu	37	14	52526869	52526869	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NID2	22795	broad.mit.edu	37	14	52535718	52535718	+	5'UTR	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NIN	51199	broad.mit.edu	37	14	51196186	51196186	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NIPAL4	348938	broad.mit.edu	37	5	156890271	156890271	+	Silent	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLGN4X	57502	broad.mit.edu	37	X	5811759	5811759	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP10	338322	broad.mit.edu	37	11	7982455	7982455	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP10	338322	broad.mit.edu	37	11	7984702	7984702	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP13	126204	broad.mit.edu	37	19	56424253	56424253	+	Silent	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP1	22861	broad.mit.edu	37	17	5463315	5463315	+	Nonsense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP3	114548	broad.mit.edu	37	1	247611817	247611817	+	3'UTR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP7	199713	broad.mit.edu	37	19	55450622	55450622	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NME2P1	283458	broad.mit.edu	37	12	120720566	120720566	+	RNA	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOL4	8715	broad.mit.edu	37	18	31537451	31537451	+	Silent	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOS2	4843	broad.mit.edu	37	17	26087293	26087293	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOS2	4843	broad.mit.edu	37	17	26094750	26094750	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOTCH1	4851	broad.mit.edu	37	9	139411824	139411824	+	Silent	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPAS3	64067	broad.mit.edu	37	14	33684704	33684704	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPAS3	64067	broad.mit.edu	37	14	34269137	34269137	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPC1L1	29881	broad.mit.edu	37	7	44555307	44555307	+	Intron	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPHS1	4868	broad.mit.edu	37	19	36339975	36339975	+	Silent	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPL	80896	broad.mit.edu	37	1	182772963	182772963	+	Intron	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPSR1	387129	broad.mit.edu	37	7	34889356	34889356	+	3'UTR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR0B1	190	broad.mit.edu	37	X	30322836	30322836	+	Nonsense_Mutation	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR1H4	9971	broad.mit.edu	37	12	100897338	100897338	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRG3	10718	broad.mit.edu	37	10	84745048	84745048	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRIP2	83714	broad.mit.edu	37	12	2936919	2936919	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRK	203447	broad.mit.edu	37	X	105075047	105075047	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN3	9369	broad.mit.edu	37	14	79117635	79117635	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN3	9369	broad.mit.edu	37	14	79175831	79175831	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN3	9369	broad.mit.edu	37	14	79434533	79434533	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSMAF	8439	broad.mit.edu	37	8	59510518	59510518	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSMCE2	286053	broad.mit.edu	37	8	126379083	126379083	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSUN2	54888	broad.mit.edu	37	5	6604576	6604576	+	Intron	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSUN3	63899	broad.mit.edu	37	3	93794754	93794754	+	Intron	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NT5E	4907	broad.mit.edu	37	6	86199334	86199334	+	Intron	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTM	50863	broad.mit.edu	37	11	131781455	131781455	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTM	50863	broad.mit.edu	37	11	132204969	132204969	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTNG1	22854	broad.mit.edu	37	1	107867585	107867585	+	Intron	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTNG1	22854	broad.mit.edu	37	1	107937777	107937777	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTNG2	84628	broad.mit.edu	37	9	135073437	135073437	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTRK3	4916	broad.mit.edu	37	15	88474543	88474543	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUCB2	4925	broad.mit.edu	37	11	17316822	17316822	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUDCD1	84955	broad.mit.edu	37	8	110255543	110255543	+	Intron	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUDT5	11164	broad.mit.edu	37	10	12228244	12228244	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP155	9631	broad.mit.edu	37	5	37326090	37326090	+	Intron	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP93	9688	broad.mit.edu	37	16	56857486	56857486	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF1	10482	broad.mit.edu	37	11	62569425	62569425	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF2B	728343	broad.mit.edu	37	X	101623684	101623684	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF3	56000	broad.mit.edu	37	X	102334758	102334758	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF5	55998	broad.mit.edu	37	X	101092565	101092565	+	Silent	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OC90	729330	broad.mit.edu	37	8	133044419	133044419	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OC90	729330	broad.mit.edu	37	8	133051386	133051386	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OCA2	4948	broad.mit.edu	37	15	28000606	28000606	+	Silent	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OCA2	4948	broad.mit.edu	37	15	28326902	28326902	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OCRL	4952	broad.mit.edu	37	X	128722861	128722861	+	Splice_Site	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ1	10178	broad.mit.edu	37	X	123514787	123514787	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ1	10178	broad.mit.edu	37	X	123539001	123539001	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ1	10178	broad.mit.edu	37	X	123680902	123680902	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ1	10178	broad.mit.edu	37	X	123697731	123697731	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ1	10178	broad.mit.edu	37	X	124097465	124097465	+	Silent	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ3	55714	broad.mit.edu	37	4	183652154	183652154	+	Silent	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OGT	8473	broad.mit.edu	37	X	70774511	70774511	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OGT	8473	broad.mit.edu	37	X	70775075	70775075	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OLFM3	118427	broad.mit.edu	37	1	102270165	102270165	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OLFM3	118427	broad.mit.edu	37	1	102270432	102270432	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OLFML2A	169611	broad.mit.edu	37	9	127563737	127563737	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OLR1	4973	broad.mit.edu	37	12	10313198	10313198	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OMA1	115209	broad.mit.edu	37	1	58971854	58971854	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPA1	4976	broad.mit.edu	37	3	193366713	193366713	+	Intron	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPA1	4976	broad.mit.edu	37	3	193377302	193377302	+	Silent	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPHN1	4983	broad.mit.edu	37	X	67273739	67273739	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPRL1	4987	broad.mit.edu	37	20	62729228	62729228	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10A2	341276	broad.mit.edu	37	11	6891205	6891205	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10G3	26533	broad.mit.edu	37	14	22038868	22038868	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10G9	219870	broad.mit.edu	37	11	123894254	123894254	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10H4	126541	broad.mit.edu	37	19	16060414	16060414	+	Missense_Mutation	SNP	G	T	T	rs138110639		TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10J5	127385	broad.mit.edu	37	1	159505255	159505255	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10K1	391109	broad.mit.edu	37	1	158436129	158436129	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10R2	343406	broad.mit.edu	37	1	158450221	158450221	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10Z1	128368	broad.mit.edu	37	1	158576401	158576401	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR12D2	26529	broad.mit.edu	37	6	29364671	29364671	+	Silent	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR13C5	138799	broad.mit.edu	37	9	107361235	107361235	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR13G1	441933	broad.mit.edu	37	1	247835538	247835538	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR13G1	441933	broad.mit.edu	37	1	247835734	247835734	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1C1	26188	broad.mit.edu	37	1	247921131	247921131	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1L4	254973	broad.mit.edu	37	9	125486596	125486596	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1S2	219958	broad.mit.edu	37	11	57971444	57971444	+	Silent	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2AT4	341152	broad.mit.edu	37	11	74800785	74800785	+	5'Flank	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2F2	135948	broad.mit.edu	37	7	143632636	143632636	+	Frame_Shift_Del	DEL	C	-	-			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2G6	391211	broad.mit.edu	37	1	248685897	248685897	+	Nonstop_Mutation	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2K2	26248	broad.mit.edu	37	9	114091950	114091951	+	5'Flank	DNP	AG	GT	GT			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L13	284521	broad.mit.edu	37	1	248166941	248166941	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L13	284521	broad.mit.edu	37	1	248247578	248247578	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L3	391192	broad.mit.edu	37	1	248224642	248224642	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L8	391190	broad.mit.edu	37	1	248113076	248113076	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2M3	127062	broad.mit.edu	37	1	248366706	248366706	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2M3	127062	broad.mit.edu	37	1	248367104	248367104	+	Silent	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T33	391195	broad.mit.edu	37	1	248436797	248436797	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T34	127068	broad.mit.edu	37	1	248737322	248737322	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR3A1	4994	broad.mit.edu	37	17	3195448	3195448	+	Silent	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4A15	81328	broad.mit.edu	37	11	55135683	55135683	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4A15	81328	broad.mit.edu	37	11	55135949	55135949	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4C11	219429	broad.mit.edu	37	11	55371537	55371537	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4C6	219432	broad.mit.edu	37	11	55433215	55433215	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4D2	124538	broad.mit.edu	37	17	56246911	56246911	+	5'Flank	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4F6	390648	broad.mit.edu	37	15	102346731	102346731	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4K13	390433	broad.mit.edu	37	14	20502482	20502482	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4M1	441670	broad.mit.edu	37	14	20248529	20248530	+	Missense_Mutation	DNP	CC	AG	AG			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4N5	390437	broad.mit.edu	37	14	20612634	20612634	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51F1	256892	broad.mit.edu	37	11	4790663	4790663	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51F2	119694	broad.mit.edu	37	11	4843196	4843196	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51F2	119694	broad.mit.edu	37	11	4843569	4843569	+	Silent	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51G1	79324	broad.mit.edu	37	11	4945572	4945572	+	5'Flank	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51I1	390063	broad.mit.edu	37	11	5462407	5462407	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52K2	119774	broad.mit.edu	37	11	4471181	4471181	+	Silent	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5AC2	81050	broad.mit.edu	37	3	97806152	97806152	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5B12	390191	broad.mit.edu	37	11	58206760	58206760	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5B3	441608	broad.mit.edu	37	11	58170623	58170623	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5D16	390144	broad.mit.edu	37	11	55606301	55606301	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5D18	219438	broad.mit.edu	37	11	55587576	55587576	+	Silent	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5F1	338674	broad.mit.edu	37	11	55761719	55761719	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5L2	26338	broad.mit.edu	37	11	55595192	55595192	+	Silent	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5L2	26338	broad.mit.edu	37	11	55595308	55595308	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6A2	8590	broad.mit.edu	37	11	6816387	6816387	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6C74	254783	broad.mit.edu	37	12	55641405	55641405	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6K3	391114	broad.mit.edu	37	1	158686969	158686969	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6N1	128372	broad.mit.edu	37	1	158735965	158735965	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6V1	346517	broad.mit.edu	37	7	142749623	142749623	+	Silent	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR7D4	125958	broad.mit.edu	37	19	9325365	9325365	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8D4	338662	broad.mit.edu	37	11	123777895	123777895	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8H2	390151	broad.mit.edu	37	11	55872600	55872600	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8I2	120586	broad.mit.edu	37	11	55861488	55861488	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8I2	120586	broad.mit.edu	37	11	55861600	55861600	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8J1	219477	broad.mit.edu	37	11	56125443	56125443	+	5'Flank	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8K1	390157	broad.mit.edu	37	11	56113544	56113544	+	Silent	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL3	26031	broad.mit.edu	37	7	24945966	24945966	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTC	5009	broad.mit.edu	37	X	38226591	38226591	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTC	5009	broad.mit.edu	37	X	38229080	38229080	+	Missense_Mutation	SNP	G	T	T	rs72554337		TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTOF	9381	broad.mit.edu	37	2	26687776	26687776	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTOF	9381	broad.mit.edu	37	2	26702453	26702453	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTOF	9381	broad.mit.edu	37	2	26725345	26725345	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTOL1	131149	broad.mit.edu	37	3	161214687	161214687	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTOL1	131149	broad.mit.edu	37	3	161221532	161221532	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTOP1	133060	broad.mit.edu	37	4	4204167	4204167	+	Intron	SNP	C	G	G	rs73792857	by1000genomes	TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P4HTM	54681	broad.mit.edu	37	3	49044257	49044257	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PA2G4	5036	broad.mit.edu	37	12	56501119	56501119	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PABPC3	5042	broad.mit.edu	37	13	25672221	25672221	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PACSIN2	11252	broad.mit.edu	37	22	43284825	43284825	+	Intron	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAG1	55824	broad.mit.edu	37	8	81897386	81897386	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAGE2B	389860	broad.mit.edu	37	X	55102502	55102502	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAGE5	90737	broad.mit.edu	37	X	55249084	55249084	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAK4	10298	broad.mit.edu	37	19	39667178	39667178	+	Intron	SNP	G	T	T	rs113253977	by1000genomes	TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAK7	57144	broad.mit.edu	37	20	9523183	9523183	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAK7	57144	broad.mit.edu	37	20	9546566	9546566	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PALM2-AKAP2	445815	broad.mit.edu	37	9	112694417	112694417	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PANX3	116337	broad.mit.edu	37	11	124487392	124487392	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPL	390928	broad.mit.edu	37	19	39591297	39591297	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPPA2	60676	broad.mit.edu	37	1	176668590	176668590	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPPA	5069	broad.mit.edu	37	9	118950205	118950205	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPPA	5069	broad.mit.edu	37	9	118989776	118989776	+	Silent	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPPA	5069	broad.mit.edu	37	9	118997687	118997687	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPPA	5069	broad.mit.edu	37	9	119114996	119114996	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARD3B	117583	broad.mit.edu	37	2	206023603	206023603	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARK2	5071	broad.mit.edu	37	6	162475080	162475080	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARN	5073	broad.mit.edu	37	16	14680212	14680212	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARP11	57097	broad.mit.edu	37	12	3923203	3923203	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARP1	142	broad.mit.edu	37	1	226570900	226570900	+	Intron	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARVB	29780	broad.mit.edu	37	22	44536470	44536470	+	Intron	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PBXIP1	57326	broad.mit.edu	37	1	154919131	154919131	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH10	57575	broad.mit.edu	37	4	134071523	134071523	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH10	57575	broad.mit.edu	37	4	134075490	134075490	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH11X	27328	broad.mit.edu	37	X	91132636	91132636	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH11X	27328	broad.mit.edu	37	X	91238288	91238288	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH11X	27328	broad.mit.edu	37	X	91238335	91238335	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH15	65217	broad.mit.edu	37	10	55943077	55943077	+	Intron	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH15	65217	broad.mit.edu	37	10	56106296	56106296	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA11	56138	broad.mit.edu	37	5	140250429	140250429	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA1	56147	broad.mit.edu	37	5	140166920	140166920	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA3	56145	broad.mit.edu	37	5	140181571	140181571	+	Silent	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA3	56145	broad.mit.edu	37	5	140182007	140182007	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA4	56144	broad.mit.edu	37	5	140188758	140188758	+	Silent	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB2	56133	broad.mit.edu	37	5	140474955	140474955	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGB1	56104	broad.mit.edu	37	5	140729929	140729929	+	Silent	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGB1	56104	broad.mit.edu	37	5	140730620	140730620	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGB3	56102	broad.mit.edu	37	5	140750336	140750336	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCGF2	7703	broad.mit.edu	37	17	36896468	36896468	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCGF6	84108	broad.mit.edu	37	10	105108402	105108402	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCK2	5106	broad.mit.edu	37	14	24566274	24566274	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCLO	27445	broad.mit.edu	37	7	82579536	82579536	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCLO	27445	broad.mit.edu	37	7	82584457	82584457	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCM1	5108	broad.mit.edu	37	8	17827249	17827249	+	Silent	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCMT1	5110	broad.mit.edu	37	6	150114744	150114744	+	Silent	SNP	A	C	C	rs142533009		TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCNXL2	80003	broad.mit.edu	37	1	233424944	233424944	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCOLCE	5118	broad.mit.edu	37	7	100205094	100205094	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCSK6	5046	broad.mit.edu	37	15	101972301	101972301	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE10A	10846	broad.mit.edu	37	6	165801671	165801671	+	Intron	SNP	A	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE10A	10846	broad.mit.edu	37	6	165810023	165810023	+	Intron	SNP	A	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE3A	5139	broad.mit.edu	37	12	20602565	20602565	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE3B	5140	broad.mit.edu	37	11	14880790	14880790	+	Nonsense_Mutation	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144868162	144868162	+	Silent	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144879316	144879316	+	Silent	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE6A	5145	broad.mit.edu	37	5	149312181	149312181	+	Intron	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE9A	5152	broad.mit.edu	37	21	44108030	44108030	+	Silent	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDIA5	10954	broad.mit.edu	37	3	122843223	122843223	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDIA5	10954	broad.mit.edu	37	3	122849376	122849376	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDILT	204474	broad.mit.edu	37	16	20370825	20370825	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDXDC1	23042	broad.mit.edu	37	16	15222118	15222118	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZD3	79849	broad.mit.edu	37	11	119059606	119059606	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZD9	255762	broad.mit.edu	37	16	22010352	22010352	+	Intron	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEBP4	157310	broad.mit.edu	37	8	22570843	22570843	+	3'UTR	DEL	G	-	-			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PECR	55825	broad.mit.edu	37	2	216916162	216916162	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEG10	23089	broad.mit.edu	37	7	94293376	94293376	+	Nonsense_Mutation	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PELI2	57161	broad.mit.edu	37	14	56763321	56763321	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEX6	5190	broad.mit.edu	37	6	42933312	42933312	+	Intron	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PFKFB1	5207	broad.mit.edu	37	X	54959908	54959908	+	Intron	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGBD3	267004	broad.mit.edu	37	10	50723611	50723611	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGLYRP2	114770	broad.mit.edu	37	19	15579522	15579522	+	Silent	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGLYRP4	57115	broad.mit.edu	37	1	153315534	153315535	+	Intron	INS	-	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHACTR3	116154	broad.mit.edu	37	20	58349709	58349709	+	Intron	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHF2	5253	broad.mit.edu	37	9	96421775	96421775	+	Intron	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHIP	55023	broad.mit.edu	37	6	79671400	79671400	+	Intron	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHKA2	5256	broad.mit.edu	37	X	18956834	18956834	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHLDB2	90102	broad.mit.edu	37	3	111664221	111664221	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHPT1	29085	broad.mit.edu	37	9	139745268	139745268	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHRF1	57661	broad.mit.edu	37	11	587399	587399	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHTF2	57157	broad.mit.edu	37	7	77538339	77538339	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PI15	51050	broad.mit.edu	37	8	75757373	75757373	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIGR	5284	broad.mit.edu	37	1	207107960	207107960	+	Nonsense_Mutation	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3AP1	118788	broad.mit.edu	37	10	98411166	98411166	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3C2G	5288	broad.mit.edu	37	12	18747456	18747456	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3C3	5289	broad.mit.edu	37	18	39573209	39573209	+	Intron	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIP4K2C	79837	broad.mit.edu	37	12	57994097	57994097	+	Intron	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIP5K1C	23396	broad.mit.edu	37	19	3639071	3639071	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIPOX	51268	broad.mit.edu	37	17	27381758	27381758	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD1L2	114780	broad.mit.edu	37	16	81208465	81208465	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD2L1	9033	broad.mit.edu	37	10	102053073	102053073	+	Nonsense_Mutation	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKIA	5569	broad.mit.edu	37	8	79513982	79513982	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKLR	5313	broad.mit.edu	37	1	155269918	155269918	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA1A	51365	broad.mit.edu	37	3	119347881	119347881	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2G4A	5321	broad.mit.edu	37	1	186862165	186862165	+	Silent	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2G4C	8605	broad.mit.edu	37	19	48591898	48591898	+	Intron	SNP	G	T	T	rs11564555	by1000genomes	TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLB1	151056	broad.mit.edu	37	2	28772895	28772895	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCB1	23236	broad.mit.edu	37	20	8637754	8637754	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCB4	5332	broad.mit.edu	37	20	9404403	9404403	+	Silent	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCB4	5332	broad.mit.edu	37	20	9416118	9416119	+	Intron	DNP	CC	GA	GA			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCB4	5332	broad.mit.edu	37	20	9440414	9440414	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCD4	84812	broad.mit.edu	37	2	219487612	219487612	+	Intron	SNP	T	G	G	rs74809044	by1000genomes	TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCE1	51196	broad.mit.edu	37	10	96014438	96014438	+	Intron	SNP	A	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCH1	23007	broad.mit.edu	37	3	155199796	155199796	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCL1	5334	broad.mit.edu	37	2	198953565	198953565	+	Intron	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLD2	5338	broad.mit.edu	37	17	4721279	4721279	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLD2	5338	broad.mit.edu	37	17	4726030	4726030	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHB2	55041	broad.mit.edu	37	2	132109567	132109567	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHG4B	153478	broad.mit.edu	37	5	143241	143241	+	Silent	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHG4B	153478	broad.mit.edu	37	5	162015	162015	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHM2	23207	broad.mit.edu	37	1	16060342	16060342	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLG	5340	broad.mit.edu	37	6	161160234	161160234	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLIN5	440503	broad.mit.edu	37	19	4529849	4529849	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLK1	5347	broad.mit.edu	37	16	23691660	23691660	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLOD2	5352	broad.mit.edu	37	3	145828019	145828019	+	Intron	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLP1	5354	broad.mit.edu	37	X	103041282	103041282	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLSCR2	57047	broad.mit.edu	37	3	146177842	146177842	+	5'UTR	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA3	55558	broad.mit.edu	37	X	153694059	153694059	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA3	55558	broad.mit.edu	37	X	153698543	153698543	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA4	91584	broad.mit.edu	37	7	131829860	131829860	+	Intron	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA4	91584	broad.mit.edu	37	7	131848872	131848872	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA4	91584	broad.mit.edu	37	7	132192628	132192628	+	Frame_Shift_Del	DEL	C	-	-			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXND1	23129	broad.mit.edu	37	3	129275046	129275046	+	3'UTR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PML	5371	broad.mit.edu	37	15	74315475	74315475	+	Silent	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PML	5371	broad.mit.edu	37	15	74327366	74327366	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PMVK	10654	broad.mit.edu	37	1	154901641	154901641	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNMA5	114824	broad.mit.edu	37	X	152159024	152159024	+	Silent	SNP	A	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNPLA1	285848	broad.mit.edu	37	6	36269959	36269959	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNPLA8	50640	broad.mit.edu	37	7	108138060	108138060	+	Intron	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNRC1	10957	broad.mit.edu	37	6	89790745	89790745	+	Silent	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLE3	54107	broad.mit.edu	37	9	116171083	116171083	+	3'UTR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLE	5426	broad.mit.edu	37	12	133201441	133201449	+	Intron	DEL	AGGAGGCCA	-	-	rs5745082		TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLE	5426	broad.mit.edu	37	12	133218912	133218912	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLQ	10721	broad.mit.edu	37	3	121179124	121179124	+	Intron	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLQ	10721	broad.mit.edu	37	3	121190908	121190908	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLQ	10721	broad.mit.edu	37	3	121203829	121203829	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR2A	5430	broad.mit.edu	37	17	7405315	7405315	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POMC	5443	broad.mit.edu	37	2	25383997	25383997	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POMT1	10585	broad.mit.edu	37	9	134385640	134385640	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POMT1	10585	broad.mit.edu	37	9	134394065	134394065	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POMT1	10585	broad.mit.edu	37	9	134397674	134397674	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PON1	5444	broad.mit.edu	37	7	94978134	94978134	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PON1	5444	broad.mit.edu	37	7	94979582	94979582	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POTEF	728378	broad.mit.edu	37	2	130832437	130832437	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POTEG	404785	broad.mit.edu	37	14	19566158	19566158	+	Intron	SNP	A	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POTEH	23784	broad.mit.edu	37	22	16288034	16288034	+	5'Flank	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POU5F1	5460	broad.mit.edu	37	6	31133882	31133882	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPARA	5465	broad.mit.edu	37	22	46611058	46611058	+	Intron	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPCS	79717	broad.mit.edu	37	1	42923009	42923009	+	Silent	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPFIA3	8541	broad.mit.edu	37	19	49652395	49652395	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPFIBP1	8496	broad.mit.edu	37	12	27745100	27745100	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPFIBP1	8496	broad.mit.edu	37	12	27840526	27840526	+	Intron	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPIL5	122769	broad.mit.edu	37	14	50074788	50074788	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R16B	26051	broad.mit.edu	37	20	37529180	37529180	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R3C	5507	broad.mit.edu	37	10	93390350	93390350	+	Silent	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2CB	5516	broad.mit.edu	37	8	30657089	30657089	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R1B	5519	broad.mit.edu	37	11	111636056	111636056	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R2C	5522	broad.mit.edu	37	4	6325266	6325266	+	Silent	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPRC1	23082	broad.mit.edu	37	10	103899474	103899474	+	Silent	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRAF2	11230	broad.mit.edu	37	X	48931381	48931381	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRAP1	118471	broad.mit.edu	37	10	135164842	135164842	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRC1	9055	broad.mit.edu	37	15	91524331	91524331	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM9	56979	broad.mit.edu	37	5	23517986	23517986	+	Intron	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDX1	5052	broad.mit.edu	37	1	45981335	45981335	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PREP	5550	broad.mit.edu	37	6	105726111	105726111	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PREX1	57580	broad.mit.edu	37	20	47266762	47266762	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRG4	10216	broad.mit.edu	37	1	186277184	186277184	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRIM2	5558	broad.mit.edu	37	6	57512650	57512650	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKCE	5581	broad.mit.edu	37	2	46228589	46228589	+	Silent	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PROS1	5627	broad.mit.edu	37	3	93605208	93605209	+	Missense_Mutation	DNP	CG	AA	AA			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRPF4B	8899	broad.mit.edu	37	6	4037797	4037797	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRPF6	24148	broad.mit.edu	37	20	62659038	62659038	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRPH	5630	broad.mit.edu	37	12	49690331	49690331	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRPS1	5631	broad.mit.edu	37	X	106871989	106871989	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRR5L	79899	broad.mit.edu	37	11	36458870	36458870	+	Intron	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRSS1	5644	broad.mit.edu	37	7	142457402	142457402	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRUNE2	158471	broad.mit.edu	37	9	79320124	79320124	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRUNE2	158471	broad.mit.edu	37	9	79323268	79323268	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRUNE2	158471	broad.mit.edu	37	9	79325448	79325448	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSD3	23362	broad.mit.edu	37	8	18656784	18656784	+	Intron	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSEN2	5664	broad.mit.edu	37	1	227076648	227076648	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG1	5669	broad.mit.edu	37	19	43348634	43348634	+	3'UTR	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG3	5671	broad.mit.edu	37	19	43244401	43244401	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG6	5675	broad.mit.edu	37	19	43411502	43411502	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG6	5675	broad.mit.edu	37	19	43421727	43421727	+	Intron	SNP	G	T	T	rs142905466	by1000genomes	TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG6	5675	broad.mit.edu	37	19	43528843	43528843	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG6	5675	broad.mit.edu	37	19	43528992	43528992	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG6	5675	broad.mit.edu	37	19	43600892	43600892	+	Intron	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSIP1	11168	broad.mit.edu	37	9	15469012	15469012	+	Silent	SNP	A	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSKH2	85481	broad.mit.edu	37	8	87076237	87076237	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMA1	5682	broad.mit.edu	37	11	14535931	14535931	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMA3	5684	broad.mit.edu	37	14	58730469	58730469	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMA4	5685	broad.mit.edu	37	15	78838104	78838104	+	Missense_Mutation	SNP	G	T	T	rs147172987		TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMA8	143471	broad.mit.edu	37	18	23751209	23751209	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMC2	5701	broad.mit.edu	37	7	103008535	103008535	+	3'UTR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMD11	5717	broad.mit.edu	37	17	30807240	30807240	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMD3	5709	broad.mit.edu	37	17	38144947	38144947	+	Silent	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSME4	23198	broad.mit.edu	37	2	54125136	54125136	+	Silent	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSPC1	55269	broad.mit.edu	37	13	20346659	20346659	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTGER2	5732	broad.mit.edu	37	14	52781861	52781861	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTGS2	5743	broad.mit.edu	37	1	186648545	186648545	+	Silent	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTK7	5754	broad.mit.edu	37	6	43111327	43111327	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTP4A1	7803	broad.mit.edu	37	6	64286797	64286797	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTP4A1	7803	broad.mit.edu	37	6	64289065	64289065	+	Intron	DEL	G	-	-			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN18	26469	broad.mit.edu	37	2	131116958	131116958	+	Intron	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN3	5774	broad.mit.edu	37	9	112151516	112151516	+	Silent	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN5	84867	broad.mit.edu	37	11	18759424	18759424	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	8340220	8340220	+	Intron	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	8341911	8341911	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	8404421	8404421	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	8449761	8449761	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	8465429	8465429	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	8499800	8499800	+	Silent	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	8525032	8525032	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	8633452	8633452	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRG	5793	broad.mit.edu	37	3	62204750	62204750	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRN2	5799	broad.mit.edu	37	7	157364164	157364165	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRN2	5799	broad.mit.edu	37	7	157985171	157985171	+	Missense_Mutation	SNP	C	A	A	rs140977880	byFrequency;by1000genomes	TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRN	5798	broad.mit.edu	37	2	220161695	220161695	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRN	5798	broad.mit.edu	37	2	220166876	220166876	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRT	11122	broad.mit.edu	37	20	40827780	40827780	+	Intron	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRT	11122	broad.mit.edu	37	20	41100897	41100897	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRZ1	5803	broad.mit.edu	37	7	121623630	121623630	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTTG1	9232	broad.mit.edu	37	5	159854761	159854761	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PWP1	11137	broad.mit.edu	37	12	108079665	108079665	+	5'UTR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PXDNL	137902	broad.mit.edu	37	8	52233380	52233380	+	Silent	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PXK	54899	broad.mit.edu	37	3	58380797	58380797	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PXK	54899	broad.mit.edu	37	3	58398563	58398563	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PZP	5858	broad.mit.edu	37	12	9355209	9355209	+	Silent	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
QPCT	25797	broad.mit.edu	37	2	37599640	37599641	+	Intron	DEL	TG	-	-			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
QRICH2	84074	broad.mit.edu	37	17	74276296	74276296	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
R3HDML	140902	broad.mit.edu	37	20	42969841	42969841	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB2A	5862	broad.mit.edu	37	8	61471568	61471568	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB43	339122	broad.mit.edu	37	3	128875701	128875701	+	Silent	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAD50	10111	broad.mit.edu	37	5	131931411	131931411	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAD9B	144715	broad.mit.edu	37	12	110950713	110950713	+	Intron	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAF1	5894	broad.mit.edu	37	3	12645699	12645699	+	Missense_Mutation	SNP	G	C	C	rs80338796		TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAI2	10742	broad.mit.edu	37	X	17818874	17818874	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RALGPS2	55103	broad.mit.edu	37	1	178863068	178863068	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RANBP1	5902	broad.mit.edu	37	22	20114367	20114367	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAP1B	5908	broad.mit.edu	37	12	69036310	69036310	+	Intron	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAPGEF4	11069	broad.mit.edu	37	2	173850327	173850327	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAPGEF5	9771	broad.mit.edu	37	7	22259521	22259521	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAPGEF5	9771	broad.mit.edu	37	7	22330820	22330820	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASAL1	8437	broad.mit.edu	37	12	113537595	113537595	+	3'UTR	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASGEF1B	153020	broad.mit.edu	37	4	82348914	82348914	+	3'UTR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASSF6	166824	broad.mit.edu	37	4	74450995	74450995	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RB1CC1	9821	broad.mit.edu	37	8	53555178	53555178	+	Intron	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM41	55285	broad.mit.edu	37	X	106310851	106310851	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM41	55285	broad.mit.edu	37	X	106361905	106361905	+	Intron	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM44	375316	broad.mit.edu	37	2	238730095	238730095	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RC3H2	54542	broad.mit.edu	37	9	125642884	125642884	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RCSD1	92241	broad.mit.edu	37	1	167599653	167599653	+	5'UTR	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RDH8	50700	broad.mit.edu	37	19	10132406	10132406	+	Missense_Mutation	SNP	C	A	A	rs116330337	byFrequency;by1000genomes	TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RECQL4	9401	broad.mit.edu	37	8	145737889	145737889	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RECQL	5965	broad.mit.edu	37	12	21652495	21652495	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REG1A	5967	broad.mit.edu	37	2	79349047	79349047	+	Intron	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REG1B	5968	broad.mit.edu	37	2	79313967	79313967	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REG3G	130120	broad.mit.edu	37	2	79253732	79253732	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RELL2	285613	broad.mit.edu	37	5	141018471	141018471	+	Intron	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RELN	5649	broad.mit.edu	37	7	103185752	103185752	+	Silent	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RELN	5649	broad.mit.edu	37	7	103212666	103212666	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RELN	5649	broad.mit.edu	37	7	103294530	103294530	+	Intron	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RELN	5649	broad.mit.edu	37	7	103629477	103629477	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RENBP	5973	broad.mit.edu	37	X	153200917	153200917	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RET	5979	broad.mit.edu	37	10	43600684	43600684	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REV1	51455	broad.mit.edu	37	2	100038179	100038180	+	Intron	INS	-	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFX5	5993	broad.mit.edu	37	1	151315112	151315112	+	Frame_Shift_Del	DEL	C	-	-			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGPD4	285190	broad.mit.edu	37	2	108476182	108476182	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS7	6000	broad.mit.edu	37	1	240966167	240966167	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHBDD2	57414	broad.mit.edu	37	7	75517545	75517545	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHCE	6006	broad.mit.edu	37	1	25697057	25697057	+	Intron	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHCG	51458	broad.mit.edu	37	15	90023572	90023572	+	Missense_Mutation	SNP	C	A	A	rs149510924	by1000genomes	TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHOT1	55288	broad.mit.edu	37	17	30551723	30551723	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RICH2	9912	broad.mit.edu	37	17	12883544	12883544	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMBP2	23504	broad.mit.edu	37	12	130912696	130912696	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMKLB	57494	broad.mit.edu	37	12	8895381	8895381	+	Intron	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS2	9699	broad.mit.edu	37	8	104943646	104943646	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIN1	9610	broad.mit.edu	37	11	66099706	66099706	+	3'UTR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIPPLY2	134701	broad.mit.edu	37	6	84563488	84563488	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIT2	6014	broad.mit.edu	37	18	40323655	40323655	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RLIM	51132	broad.mit.edu	37	X	73812090	73812090	+	Missense_Mutation	SNP	C	A	A	rs61752448		TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RMND5A	64795	broad.mit.edu	37	2	87404328	87404328	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNASEH1	246243	broad.mit.edu	37	2	3593432	3593432	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RND2	8153	broad.mit.edu	37	17	41179413	41179413	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RND3	390	broad.mit.edu	37	2	151326542	151326543	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF123	63891	broad.mit.edu	37	3	49736441	49736441	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF144A	9781	broad.mit.edu	37	2	7137104	7137104	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF152	220441	broad.mit.edu	37	18	59483517	59483517	+	Silent	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF17	56163	broad.mit.edu	37	13	25338208	25338208	+	5'Flank	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF213	57674	broad.mit.edu	37	17	78327389	78327389	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF4	6047	broad.mit.edu	37	4	2514677	2514677	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROBO1	6091	broad.mit.edu	37	3	78666912	78666912	+	Silent	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROBO2	6092	broad.mit.edu	37	3	77614331	77614331	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROBO3	64221	broad.mit.edu	37	11	124742273	124742273	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROBO4	54538	broad.mit.edu	37	11	124766323	124766323	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RORA	6095	broad.mit.edu	37	15	60849023	60849023	+	Intron	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RORA	6095	broad.mit.edu	37	15	60970879	60970880	+	Missense_Mutation	DNP	GA	CT	CT			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RORB	6096	broad.mit.edu	37	9	77277352	77277352	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROS1	6098	broad.mit.edu	37	6	117686136	117686136	+	Intron	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RP1L1	94137	broad.mit.edu	37	8	10470762	10470762	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RP1	6101	broad.mit.edu	37	8	55540660	55540660	+	Silent	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPAP2	79871	broad.mit.edu	37	1	92765689	92765689	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPGR	6103	broad.mit.edu	37	X	38180393	38180393	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPH3A	22895	broad.mit.edu	37	12	113266087	113266087	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPL10L	140801	broad.mit.edu	37	14	47120772	47120772	+	Missense_Mutation	SNP	T	G	G	rs138905696		TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPL10	6134	broad.mit.edu	37	X	153628874	153628874	+	Silent	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPL27	6155	broad.mit.edu	37	17	41154647	41154647	+	Intron	DEL	G	-	-			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPL32P3	132241	broad.mit.edu	37	3	129114986	129114986	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPL39	6170	broad.mit.edu	37	X	118920824	118920824	+	Intron	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPL4	6124	broad.mit.edu	37	15	66795622	66795622	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPRD1A	55197	broad.mit.edu	37	18	33606995	33606995	+	Silent	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPS11	6205	broad.mit.edu	37	19	50002824	50002824	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPS16	6217	broad.mit.edu	37	19	39926419	39926419	+	Intron	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPS6KA2	6196	broad.mit.edu	37	6	166844023	166844023	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPS6KA2	6196	broad.mit.edu	37	6	166952269	166952269	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPS6KA3	6197	broad.mit.edu	37	X	20173624	20173624	+	Silent	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPTOR	57521	broad.mit.edu	37	17	78516405	78516405	+	5'Flank	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPUSD4	84881	broad.mit.edu	37	11	126073362	126073362	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RRAGB	10325	broad.mit.edu	37	X	55777611	55777611	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSL24D1	51187	broad.mit.edu	37	15	55483308	55483308	+	Intron	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSPO1	284654	broad.mit.edu	37	1	38079564	38079564	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTEL1	51750	broad.mit.edu	37	20	62316829	62316829	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTN1	6252	broad.mit.edu	37	14	60097102	60097102	+	Intron	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTP1	132112	broad.mit.edu	37	3	186917319	186917319	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTP2	344892	broad.mit.edu	37	3	187419860	187419860	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUFY2	55680	broad.mit.edu	37	10	70161320	70161320	+	Intron	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUFY3	22902	broad.mit.edu	37	4	71634199	71634199	+	Intron	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUFY3	22902	broad.mit.edu	37	4	71654661	71654661	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUNX3	864	broad.mit.edu	37	1	25256084	25256084	+	Silent	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUSC1	23623	broad.mit.edu	37	1	155294588	155294588	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR1	6261	broad.mit.edu	37	19	38934437	38934437	+	Splice_Site	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237669979	237669979	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237804305	237804305	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237947745	237947745	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237947932	237947932	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR3	6263	broad.mit.edu	37	15	34015011	34015011	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SACS	26278	broad.mit.edu	37	13	23915308	23915308	+	Silent	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SALL2	6297	broad.mit.edu	37	14	21992359	21992359	+	Silent	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMD9L	219285	broad.mit.edu	37	7	92761288	92761288	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMM50	25813	broad.mit.edu	37	22	44392384	44392384	+	3'UTR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAP130	79595	broad.mit.edu	37	2	128750982	128750982	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SBF1	6305	broad.mit.edu	37	22	50904684	50904684	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SBF2	81846	broad.mit.edu	37	11	9981217	9981217	+	Intron	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCAMP5	192683	broad.mit.edu	37	15	75310399	75310399	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCEL	8796	broad.mit.edu	37	13	78138069	78138069	+	Intron	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCFD1	23256	broad.mit.edu	37	14	31099691	31099691	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCFD2	152579	broad.mit.edu	37	4	54139940	54139940	+	Intron	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCGB1C1	147199	broad.mit.edu	37	11	193654	193654	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCHIP1	29970	broad.mit.edu	37	3	159606466	159606466	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN3A	6328	broad.mit.edu	37	2	166026944	166026944	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN5A	6331	broad.mit.edu	37	3	38647682	38647682	+	Intron	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN5A	6331	broad.mit.edu	37	3	38649769	38649769	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN9A	6335	broad.mit.edu	37	2	167060506	167060506	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCPEP1	59342	broad.mit.edu	37	17	55065091	55065091	+	Silent	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCYL2	55681	broad.mit.edu	37	12	100676872	100676872	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDC1	6382	broad.mit.edu	37	2	20403687	20403687	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDCCAG3	10807	broad.mit.edu	37	9	139299458	139299458	+	Intron	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDHAP3	728609	broad.mit.edu	37	5	1576244	1576244	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDHB	6390	broad.mit.edu	37	1	17371269	17371269	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDK1	221935	broad.mit.edu	37	7	4272989	4272989	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDPR	8436	broad.mit.edu	37	2	192701131	192701131	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC23B	10483	broad.mit.edu	37	20	18485210	18485210	+	5'Flank	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC31B	25956	broad.mit.edu	37	10	102249491	102249491	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC61A2	55176	broad.mit.edu	37	10	12206455	12206455	+	3'UTR	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SELENBP1	8991	broad.mit.edu	37	1	151340867	151340867	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SELL	6402	broad.mit.edu	37	1	169677594	169677594	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA3D	223117	broad.mit.edu	37	7	84671660	84671660	+	Intron	SNP	A	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA3D	223117	broad.mit.edu	37	7	84702466	84702466	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA4D	10507	broad.mit.edu	37	9	92001394	92001394	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA6D	80031	broad.mit.edu	37	15	47873463	47873463	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SENP6	26054	broad.mit.edu	37	6	76385184	76385184	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEPHS1	22929	broad.mit.edu	37	10	13380847	13380847	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEPN1	57190	broad.mit.edu	37	1	26131589	26131589	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERAC1	84947	broad.mit.edu	37	6	158571711	158571713	+	Intron	DEL	CTT	-	-			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINA13	388007	broad.mit.edu	37	14	95111221	95111221	+	Intron	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINA4	5267	broad.mit.edu	37	14	95030062	95030062	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINA5	5104	broad.mit.edu	37	14	95053825	95053825	+	Silent	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINA5	5104	broad.mit.edu	37	14	95058421	95058421	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINA5	5104	broad.mit.edu	37	14	95058540	95058540	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINA6	866	broad.mit.edu	37	14	94772431	94772431	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINB10	5273	broad.mit.edu	37	18	61602339	61602339	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINB11	89778	broad.mit.edu	37	18	61379774	61379774	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINB2	5055	broad.mit.edu	37	18	61570574	61570574	+	3'UTR	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINE1	5054	broad.mit.edu	37	7	100780229	100780229	+	Intron	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SESN2	83667	broad.mit.edu	37	1	28595551	28595551	+	Intron	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETBP1	26040	broad.mit.edu	37	18	42533228	42533228	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETD1A	9739	broad.mit.edu	37	16	30978811	30978811	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETD2	29072	broad.mit.edu	37	3	47162473	47162473	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEZ6	124925	broad.mit.edu	37	17	27285169	27285169	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFMBT1	51460	broad.mit.edu	37	3	52941692	52941692	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFRS12	140890	broad.mit.edu	37	5	65466074	65466074	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFRS8	6433	broad.mit.edu	37	12	132211391	132211391	+	Intron	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFXN5	94097	broad.mit.edu	37	2	73249655	73249655	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGCA	6442	broad.mit.edu	37	17	48244641	48244641	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGIP1	84251	broad.mit.edu	37	1	67091696	67091696	+	Intron	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGIP1	84251	broad.mit.edu	37	1	67133274	67133274	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH2B1	25970	broad.mit.edu	37	16	28883539	28883539	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH2D4B	387694	broad.mit.edu	37	10	82331222	82331222	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3BGRL	6451	broad.mit.edu	37	X	80533932	80533932	+	Intron	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3PXD2B	285590	broad.mit.edu	37	5	171765892	171765892	+	Silent	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHANK1	50944	broad.mit.edu	37	19	51189751	51189751	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHC1	6464	broad.mit.edu	37	1	154942391	154942391	+	Intron	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHC3	53358	broad.mit.edu	37	9	91653039	91653039	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHQ1	55164	broad.mit.edu	37	3	72890352	72890352	+	Splice_Site	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIDT2	51092	broad.mit.edu	37	11	117057193	117057193	+	Intron	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC10	89790	broad.mit.edu	37	19	51918113	51918113	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC16	400709	broad.mit.edu	37	19	50473421	50473421	+	RNA	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC16	400709	broad.mit.edu	37	19	50475328	50475328	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC7	27036	broad.mit.edu	37	19	51647777	51647777	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC8	27181	broad.mit.edu	37	19	51957403	51957403	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIPA1L3	23094	broad.mit.edu	37	19	38682756	38682756	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIRPB1	10326	broad.mit.edu	37	20	1552524	1552524	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIT1	27240	broad.mit.edu	37	9	35650510	35650510	+	Silent	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SI	6476	broad.mit.edu	37	3	164714444	164714444	+	Intron	SNP	A	C	C	rs115606442	by1000genomes	TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SI	6476	broad.mit.edu	37	3	164760918	164760918	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SI	6476	broad.mit.edu	37	3	164785251	164785251	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SKIV2L2	23517	broad.mit.edu	37	5	54645370	54645370	+	Intron	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SKP1	6500	broad.mit.edu	37	5	133496754	133496754	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC10A2	6555	broad.mit.edu	37	13	103718394	103718394	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A5	57468	broad.mit.edu	37	20	44663865	44663865	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A5	57468	broad.mit.edu	37	20	44673755	44673755	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A6	9990	broad.mit.edu	37	15	34528409	34528409	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A9	56996	broad.mit.edu	37	7	100459533	100459533	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC13A1	6561	broad.mit.edu	37	7	122809071	122809071	+	Intron	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC13A3	64849	broad.mit.edu	37	20	45217716	45217716	+	Intron	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC13A4	26266	broad.mit.edu	37	7	135390248	135390248	+	Intron	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC14A1	6563	broad.mit.edu	37	18	43316361	43316361	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC14A2	8170	broad.mit.edu	37	18	43204687	43204687	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC15A2	6565	broad.mit.edu	37	3	121658294	121658294	+	Silent	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC15A3	51296	broad.mit.edu	37	11	60713987	60713987	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC17A6	57084	broad.mit.edu	37	11	22397598	22397598	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC1A2	6506	broad.mit.edu	37	11	35308338	35308338	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC20A1	6574	broad.mit.edu	37	2	113416317	113416317	+	Intron	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A13	9390	broad.mit.edu	37	3	38311832	38311832	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A16	85413	broad.mit.edu	37	6	110778046	110778046	+	Silent	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A25	387601	broad.mit.edu	37	11	62933577	62933577	+	Silent	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC24A3	57419	broad.mit.edu	37	20	19634610	19634610	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC24A5	283652	broad.mit.edu	37	15	48414122	48414122	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A3	1811	broad.mit.edu	37	7	107431829	107431829	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A7	115111	broad.mit.edu	37	8	92365065	92365065	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A7	115111	broad.mit.edu	37	8	92406486	92406486	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC27A6	28965	broad.mit.edu	37	5	128302151	128302151	+	Silent	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC29A1	2030	broad.mit.edu	37	6	44201300	44201300	+	3'UTR	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC2A10	81031	broad.mit.edu	37	20	45358063	45358063	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC2A1	6513	broad.mit.edu	37	1	43395490	43395490	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC2A2	6514	broad.mit.edu	37	3	170727834	170727834	+	Missense_Mutation	SNP	C	A	A	rs144125084		TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC30A6	55676	broad.mit.edu	37	2	32429011	32429011	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC30A9	10463	broad.mit.edu	37	4	42031439	42031439	+	Intron	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC34A2	10568	broad.mit.edu	37	4	25667960	25667960	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC38A2	54407	broad.mit.edu	37	12	46760912	46760912	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC38A4	55089	broad.mit.edu	37	12	47178312	47178312	+	Intron	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC39A12	221074	broad.mit.edu	37	10	18280026	18280026	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC39A2	29986	broad.mit.edu	37	14	21468867	21468867	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC3A1	6519	broad.mit.edu	37	2	44502681	44502681	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC40A1	30061	broad.mit.edu	37	2	190445202	190445202	+	5'UTR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC43A3	29015	broad.mit.edu	37	11	57185126	57185126	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC44A1	23446	broad.mit.edu	37	9	108151295	108151295	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC44A2	57153	broad.mit.edu	37	19	10748844	10748844	+	Intron	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC44A5	204962	broad.mit.edu	37	1	75685475	75685475	+	Intron	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC44A5	204962	broad.mit.edu	37	1	75707766	75707766	+	Intron	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC45A2	51151	broad.mit.edu	37	5	33984626	33984626	+	Silent	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A10	57282	broad.mit.edu	37	2	162815078	162815078	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A1	6521	broad.mit.edu	37	17	42335508	42335508	+	Silent	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A2	6522	broad.mit.edu	37	7	150769255	150769255	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A11	6538	broad.mit.edu	37	3	10953779	10953779	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A15	55117	broad.mit.edu	37	12	85279675	85279675	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A6	6533	broad.mit.edu	37	3	14489310	14489310	+	Silent	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A6	6533	broad.mit.edu	37	3	14509522	14509522	+	Intron	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC7A14	57709	broad.mit.edu	37	3	170198912	170198912	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC7A5P2	387254	broad.mit.edu	37	16	21531411	21531411	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC7A7	9056	broad.mit.edu	37	14	23282625	23282625	+	5'UTR	SNP	C	A	A	rs72552273	by1000genomes	TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC7A8	23428	broad.mit.edu	37	14	23596443	23596443	+	Silent	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC8A1	6546	broad.mit.edu	37	2	40401924	40401924	+	Intron	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC8A3	6547	broad.mit.edu	37	14	70515545	70515545	+	Silent	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A11	284525	broad.mit.edu	37	1	173486577	173486577	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO1A2	6579	broad.mit.edu	37	12	21450297	21450297	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO6A1	133482	broad.mit.edu	37	5	101755679	101755679	+	Silent	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLFN11	91607	broad.mit.edu	37	17	33679960	33679960	+	Silent	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT1	6585	broad.mit.edu	37	10	98816305	98816305	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLITRK3	22865	broad.mit.edu	37	3	164907748	164907748	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLITRK3	22865	broad.mit.edu	37	3	164908349	164908349	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLITRK6	84189	broad.mit.edu	37	13	86369000	86369001	+	Nonsense_Mutation	DNP	GG	TT	TT			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCA1	6594	broad.mit.edu	37	X	128649851	128649851	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCA2	6595	broad.mit.edu	37	9	2104286	2104286	+	Intron	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCC1	6599	broad.mit.edu	37	3	47702927	47702927	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMC5	23137	broad.mit.edu	37	9	72962987	72962987	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMCP	4184	broad.mit.edu	37	1	152857053	152857053	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMG1	23049	broad.mit.edu	37	16	18853097	18853097	+	Silent	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMG7	9887	broad.mit.edu	37	1	183507602	183507602	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMO	6608	broad.mit.edu	37	7	128846367	128846367	+	Silent	SNP	G	T	T	rs117663825	byFrequency;by1000genomes	TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMPD4	55627	broad.mit.edu	37	2	130924963	130924963	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMPD4	55627	broad.mit.edu	37	2	130929999	130929999	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMR3A	26952	broad.mit.edu	37	4	71232510	71232510	+	Silent	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD114-29	767610	broad.mit.edu	37	14	101455620	101455620	+	5'Flank	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD115-26	100033802	broad.mit.edu	37	15	25479522	25479522	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD115-9	100033446	broad.mit.edu	37	15	25436420	25436420	+	5'Flank	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNRPD1	6632	broad.mit.edu	37	18	19192364	19192364	+	5'UTR	SNP	G	T	T	rs11548768		TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX12	29934	broad.mit.edu	37	X	70280928	70280928	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOCS2	8835	broad.mit.edu	37	12	93968706	93968706	+	Silent	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SON	6651	broad.mit.edu	37	21	34923100	34923100	+	Silent	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS1	114815	broad.mit.edu	37	10	108380238	108380238	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS1	114815	broad.mit.edu	37	10	108427576	108427576	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS1	114815	broad.mit.edu	37	10	108439016	108439016	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS1	114815	broad.mit.edu	37	10	108536424	108536424	+	Silent	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS3	22986	broad.mit.edu	37	10	106974204	106974204	+	Silent	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORL1	6653	broad.mit.edu	37	11	121393650	121393650	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORL1	6653	broad.mit.edu	37	11	121430371	121430371	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOS1	6654	broad.mit.edu	37	2	39216412	39216412	+	Silent	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOX30	11063	broad.mit.edu	37	5	157065668	157065668	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOX6	55553	broad.mit.edu	37	11	16067945	16067945	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG16	79582	broad.mit.edu	37	2	214972995	214972995	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG17	200162	broad.mit.edu	37	1	118617343	118617343	+	Intron	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG5	10615	broad.mit.edu	37	17	26912943	26912943	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAM1	6677	broad.mit.edu	37	7	123595019	123595019	+	Intron	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPANXN2	494119	broad.mit.edu	37	X	142795437	142795437	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPANXN3	139067	broad.mit.edu	37	X	142597121	142597121	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATA18	132671	broad.mit.edu	37	4	52944956	52944956	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATA18	132671	broad.mit.edu	37	4	52946138	52946138	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPDYE7P	441251	broad.mit.edu	37	7	72333490	72333490	+	RNA	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPDYE7P	441251	broad.mit.edu	37	7	72337006	72337006	+	RNA	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEF2	79925	broad.mit.edu	37	5	35697879	35697879	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEF2	79925	broad.mit.edu	37	5	35800162	35800162	+	Silent	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEG	10290	broad.mit.edu	37	2	220356565	220356565	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPG11	80208	broad.mit.edu	37	15	44876444	44876444	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPIC	121599	broad.mit.edu	37	12	101880362	101880362	+	Frame_Shift_Del	DEL	G	-	-			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPP1	6696	broad.mit.edu	37	4	88901610	88901610	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPP2	6694	broad.mit.edu	37	2	234975910	234975910	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPRR2E	6704	broad.mit.edu	37	1	153066193	153066193	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPRY1	10252	broad.mit.edu	37	4	124323229	124323229	+	Silent	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158605574	158605574	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158609348	158609348	+	Intron	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158636228	158636228	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158645926	158645926	+	Intron	DEL	C	-	-			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTAN1	6709	broad.mit.edu	37	9	131375781	131375781	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTBN2	6712	broad.mit.edu	37	11	66475808	66475808	+	Intron	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTBN4	57731	broad.mit.edu	37	19	41007852	41007852	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTLC1	10558	broad.mit.edu	37	9	94817862	94817862	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRCRB4D	136853	broad.mit.edu	37	7	76033639	76033639	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRGAP3	9901	broad.mit.edu	37	3	9055012	9055012	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRGAP3	9901	broad.mit.edu	37	3	9166584	9166584	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRPX2	27286	broad.mit.edu	37	X	99905754	99905754	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSPO	23145	broad.mit.edu	37	7	149490435	149490435	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSPO	23145	broad.mit.edu	37	7	149490782	149490782	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSX7	280658	broad.mit.edu	37	X	52681930	52681930	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSX8	280659	broad.mit.edu	37	X	52662540	52662540	+	RNA	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST18	9705	broad.mit.edu	37	8	53045816	53045816	+	Silent	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST18	9705	broad.mit.edu	37	8	53079702	53079702	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST6GALNAC5	81849	broad.mit.edu	37	1	77510143	77510143	+	Silent	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST7	7982	broad.mit.edu	37	7	116862156	116862156	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST7	7982	broad.mit.edu	37	7	116869781	116869781	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAB1	23166	broad.mit.edu	37	3	52546838	52546838	+	Intron	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAB2	55576	broad.mit.edu	37	12	103984672	103984672	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAB2	55576	broad.mit.edu	37	12	104082119	104082119	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STARD3	10948	broad.mit.edu	37	17	37817323	37817323	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAT5A	6776	broad.mit.edu	37	17	40452657	40452657	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAT5A	6776	broad.mit.edu	37	17	40459420	40459420	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STC1	6781	broad.mit.edu	37	8	23708865	23708865	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STIM1	6786	broad.mit.edu	37	11	4103450	4103450	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK10	6793	broad.mit.edu	37	5	171488210	171488210	+	Silent	SNP	G	T	T	rs114842274	by1000genomes	TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK10	6793	broad.mit.edu	37	5	171544485	171544485	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK31	56164	broad.mit.edu	37	7	23768877	23768877	+	Intron	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STOML3	161003	broad.mit.edu	37	13	39540831	39540831	+	3'UTR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STON2	85439	broad.mit.edu	37	14	81744066	81744066	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STRN3	29966	broad.mit.edu	37	14	31404599	31404599	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STRN	6801	broad.mit.edu	37	2	37105067	37105067	+	Silent	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SULF2	55959	broad.mit.edu	37	20	46365538	46365538	+	Silent	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SULT4A1	25830	broad.mit.edu	37	22	44237825	44237825	+	Intron	SNP	A	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUN3	256979	broad.mit.edu	37	7	48046873	48046873	+	Silent	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUSD1	64420	broad.mit.edu	37	9	114864400	114864400	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUV39H1	6839	broad.mit.edu	37	X	48564896	48564896	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SVIL	6840	broad.mit.edu	37	10	29821015	29821015	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SVOP	55530	broad.mit.edu	37	12	109306390	109306390	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYCP1	6847	broad.mit.edu	37	1	115487077	115487077	+	Splice_Site	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYK	6850	broad.mit.edu	37	9	93657852	93657852	+	Silent	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNCRIP	10492	broad.mit.edu	37	6	86324916	86324916	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNCRIP	10492	broad.mit.edu	37	6	86328847	86328847	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE1	23345	broad.mit.edu	37	6	152453418	152453418	+	Intron	SNP	G	A	A	rs150419138	by1000genomes	TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE1	23345	broad.mit.edu	37	6	152757291	152757291	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE1	23345	broad.mit.edu	37	6	152792681	152792681	+	Intron	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE1	23345	broad.mit.edu	37	6	152826529	152826529	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNJ2	8871	broad.mit.edu	37	6	158502332	158502332	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNM	23336	broad.mit.edu	37	15	99654000	99654000	+	Intron	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT16	83851	broad.mit.edu	37	14	62547824	62547824	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT2	127833	broad.mit.edu	37	1	202574945	202574945	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYTL4	94121	broad.mit.edu	37	X	99944921	99944921	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAB1	10454	broad.mit.edu	37	22	39817889	39817889	+	Silent	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TACC2	10579	broad.mit.edu	37	10	123846949	123846949	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF1A	9015	broad.mit.edu	37	1	222753219	222753219	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF7	6879	broad.mit.edu	37	5	140698507	140698507	+	3'UTR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAL1	6886	broad.mit.edu	37	1	47685464	47685464	+	Silent	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TANC2	26115	broad.mit.edu	37	17	61176638	61176638	+	Intron	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TARS	6897	broad.mit.edu	37	5	33457487	33457488	+	Missense_Mutation	DNP	AG	TT	TT			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAS2R16	50833	broad.mit.edu	37	7	122635151	122635151	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D23	55773	broad.mit.edu	37	3	100013984	100013987	+	Frame_Shift_Del	DEL	GGAT	-	-			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D3C	414060	broad.mit.edu	37	17	34610764	34610764	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D4	9882	broad.mit.edu	37	13	75884279	75884280	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBCCD1	55171	broad.mit.edu	37	3	186282067	186282067	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBR1	10716	broad.mit.edu	37	2	162280682	162280682	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBRG4	9238	broad.mit.edu	37	7	45145229	45145229	+	Silent	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX15	6913	broad.mit.edu	37	1	119441696	119441696	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX21	30009	broad.mit.edu	37	17	45821847	45821847	+	Splice_Site	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX3	6926	broad.mit.edu	37	12	115117764	115117764	+	Frame_Shift_Del	DEL	G	-	-			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCEA2	6919	broad.mit.edu	37	20	62701012	62701012	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCERG1	10915	broad.mit.edu	37	5	145826846	145826846	+	5'Flank	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCHHL1	126637	broad.mit.edu	37	1	152059644	152059644	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCL1B	9623	broad.mit.edu	37	14	96157705	96157705	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCL6	27004	broad.mit.edu	37	14	96131326	96131326	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCTN2	79867	broad.mit.edu	37	12	124155736	124155736	+	5'UTR	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDRD5	163589	broad.mit.edu	37	1	179561672	179561673	+	Intron	DNP	GG	TT	TT			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDRD9	122402	broad.mit.edu	37	14	104457449	104457449	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDRKH	11022	broad.mit.edu	37	1	151754015	151754015	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEAD2	8463	broad.mit.edu	37	19	49858629	49858629	+	Silent	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEAD4	7004	broad.mit.edu	37	12	3126676	3126676	+	Missense_Mutation	SNP	G	T	T	rs139665156	byFrequency	TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TECRL	253017	broad.mit.edu	37	4	65274936	65274936	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TENC1	23371	broad.mit.edu	37	12	53457101	53457101	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEX10	54881	broad.mit.edu	37	9	103064539	103064539	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEX11	56159	broad.mit.edu	37	X	69945100	69945100	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEX15	56154	broad.mit.edu	37	8	30702577	30702577	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEX2	55852	broad.mit.edu	37	17	62270972	62270972	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFB2M	64216	broad.mit.edu	37	1	246704239	246704239	+	3'UTR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGFBRAP1	9392	broad.mit.edu	37	2	105883796	105883796	+	3'UTR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGM4	7047	broad.mit.edu	37	3	44932143	44932143	+	Missense_Mutation	SNP	C	A	A	rs148772351		TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TG	7038	broad.mit.edu	37	8	133984896	133984896	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THEG	51298	broad.mit.edu	37	19	362382	362382	+	Missense_Mutation	SNP	G	A	A	rs146622836		TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THOC2	57187	broad.mit.edu	37	X	122802178	122802178	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THSD7A	221981	broad.mit.edu	37	7	11521554	11521554	+	Silent	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIAM1	7074	broad.mit.edu	37	21	32525394	32525394	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIAM1	7074	broad.mit.edu	37	21	32590058	32590058	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIPRL	261726	broad.mit.edu	37	1	168169343	168169343	+	3'UTR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TKTL2	84076	broad.mit.edu	37	4	164394640	164394640	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLE4	7091	broad.mit.edu	37	9	82319742	82319742	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLN1	7094	broad.mit.edu	37	9	35711689	35711689	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLN2	83660	broad.mit.edu	37	15	63031764	63031764	+	Intron	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLR4	7099	broad.mit.edu	37	9	120476556	120476557	+	Missense_Mutation	DNP	CC	AT	AT			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TM6SF1	53346	broad.mit.edu	37	15	83788527	83788527	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TM7SF4	81501	broad.mit.edu	37	8	105361064	105361064	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMC3	342125	broad.mit.edu	37	15	81630234	81630234	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMCO1	54499	broad.mit.edu	37	1	165697284	165697284	+	Silent	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMCO4	255104	broad.mit.edu	37	1	20027137	20027137	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM110	375346	broad.mit.edu	37	3	52883833	52883833	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM11	8834	broad.mit.edu	37	17	21101848	21101848	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM120B	144404	broad.mit.edu	37	12	122199630	122199630	+	Silent	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM120B	144404	broad.mit.edu	37	12	122199641	122199641	+	Nonsense_Mutation	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM131	23505	broad.mit.edu	37	2	98377313	98377313	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM132B	114795	broad.mit.edu	37	12	126137136	126137136	+	Silent	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM132B	114795	broad.mit.edu	37	12	126138765	126138765	+	Silent	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM132E	124842	broad.mit.edu	37	17	32964910	32964910	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM141	85014	broad.mit.edu	37	9	139686191	139686191	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM167A	153339	broad.mit.edu	37	5	82373273	82373273	+	Splice_Site	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM185A	84548	broad.mit.edu	37	X	148690313	148690313	+	Splice_Site	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM18	129787	broad.mit.edu	37	2	675549	675549	+	Nonsense_Mutation	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM200A	114801	broad.mit.edu	37	6	130762771	130762771	+	Missense_Mutation	SNP	C	G	G	rs146211569		TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM209	84928	broad.mit.edu	37	7	129825327	129825327	+	Intron	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM209	84928	broad.mit.edu	37	7	129847657	129847657	+	5'Flank	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM214	54867	broad.mit.edu	37	2	27261696	27261696	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM43	79188	broad.mit.edu	37	3	14177212	14177212	+	Intron	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM49	81671	broad.mit.edu	37	17	57814793	57814794	+	Intron	DEL	TT	-	-			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM55A	55529	broad.mit.edu	37	8	92032573	92032573	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM90B	79953	broad.mit.edu	37	20	24565469	24565469	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM90B	79953	broad.mit.edu	37	20	24565683	24565683	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMLHE	55217	broad.mit.edu	37	X	154754354	154754354	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPPE	643853	broad.mit.edu	37	3	33135177	33135177	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS11B	132724	broad.mit.edu	37	4	69107491	69107491	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS11D	9407	broad.mit.edu	37	4	68725406	68725406	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS11F	389208	broad.mit.edu	37	4	68964771	68964771	+	Intron	SNP	A	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS6	164656	broad.mit.edu	37	22	37485671	37485671	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS7	344805	broad.mit.edu	37	3	111799777	111799777	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMTC1	83857	broad.mit.edu	37	12	29911649	29911649	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMTC4	84899	broad.mit.edu	37	13	101308535	101308535	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMX3	54495	broad.mit.edu	37	18	66365210	66365210	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNC	3371	broad.mit.edu	37	9	117808850	117808850	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNFRSF1B	7133	broad.mit.edu	37	1	12253928	12253928	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNFSF14	8740	broad.mit.edu	37	19	6667330	6667330	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNIP2	79155	broad.mit.edu	37	4	2757801	2757801	+	Silent	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNNI3K	51086	broad.mit.edu	37	1	74669997	74669997	+	Intron	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNNI3K	51086	broad.mit.edu	37	1	74957781	74957781	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNRC6C	57690	broad.mit.edu	37	17	76079138	76079138	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNR	7143	broad.mit.edu	37	1	175299314	175299314	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNR	7143	broad.mit.edu	37	1	175304848	175304848	+	Silent	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOM1L1	10040	broad.mit.edu	37	17	52991148	52991148	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOP3B	8940	broad.mit.edu	37	22	22318677	22318677	+	Silent	SNP	C	A	A	rs146300429		TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOR1AIP2	163590	broad.mit.edu	37	1	179815899	179815899	+	Frame_Shift_Del	DEL	G	-	-			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOX2	84969	broad.mit.edu	37	20	42695416	42695416	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP53	7157	broad.mit.edu	37	17	7577097	7577097	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPCN1	53373	broad.mit.edu	37	12	113703898	113703898	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPCN1	53373	broad.mit.edu	37	12	113703919	113703919	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPCN1	53373	broad.mit.edu	37	12	113731174	113731174	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPCN2	219931	broad.mit.edu	37	11	68837976	68837976	+	Intron	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPK1	27010	broad.mit.edu	37	7	144150703	144150703	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPO	7173	broad.mit.edu	37	2	1488564	1488564	+	Missense_Mutation	SNP	C	A	A	rs150489706		TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE2	93492	broad.mit.edu	37	13	20137991	20137991	+	5'Flank	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE	7179	broad.mit.edu	37	21	10922029	10922029	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE	7179	broad.mit.edu	37	21	10959797	10959797	+	Silent	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAF3IP2	10758	broad.mit.edu	37	6	111922372	111922372	+	Intron	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAIP	10293	broad.mit.edu	37	3	49885557	49885557	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM2	23321	broad.mit.edu	37	4	154216897	154216897	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM48	79097	broad.mit.edu	37	11	55033073	55033073	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM4	89122	broad.mit.edu	37	7	99490096	99490096	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM50	135892	broad.mit.edu	37	7	72728365	72728365	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM58	25893	broad.mit.edu	37	1	248031118	248031118	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIP6	7205	broad.mit.edu	37	7	100468219	100468219	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRMT11	60487	broad.mit.edu	37	6	126319437	126319437	+	Silent	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPC3	7222	broad.mit.edu	37	4	122835848	122835848	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM2	7226	broad.mit.edu	37	21	45802661	45802661	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM2	7226	broad.mit.edu	37	21	45837909	45837909	+	Silent	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM2	7226	broad.mit.edu	37	21	45845594	45845594	+	Missense_Mutation	SNP	G	T	T	rs141247092		TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM3	80036	broad.mit.edu	37	9	73164370	73164370	+	Intron	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM4	54795	broad.mit.edu	37	19	49692259	49692259	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM6	140803	broad.mit.edu	37	9	77347647	77347647	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM6	140803	broad.mit.edu	37	9	77436694	77436694	+	Silent	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM8	79054	broad.mit.edu	37	2	234855735	234855735	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPS1	7227	broad.mit.edu	37	8	116631897	116631897	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPV5	56302	broad.mit.edu	37	7	142625435	142625435	+	Intron	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPV5	56302	broad.mit.edu	37	7	142626722	142626722	+	Intron	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPV5	56302	broad.mit.edu	37	7	142630652	142630652	+	5'UTR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRRAP	8295	broad.mit.edu	37	7	98515286	98515286	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRY6	154754	broad.mit.edu	37	7	142479944	142479944	+	Frame_Shift_Del	DEL	G	-	-			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRYX3	136541	broad.mit.edu	37	7	141957548	141957548	+	5'UTR	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSEN2	80746	broad.mit.edu	37	3	12571289	12571289	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSHR	7253	broad.mit.edu	37	14	81448888	81448888	+	Intron	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSHR	7253	broad.mit.edu	37	14	81554321	81554321	+	Nonsense_Mutation	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSHZ3	57616	broad.mit.edu	37	19	31767546	31767546	+	Silent	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSPAN8	7103	broad.mit.edu	37	12	71537909	71537909	+	Intron	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC17	55761	broad.mit.edu	37	11	43425763	43425763	+	Intron	SNP	A	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC21B	79809	broad.mit.edu	37	2	166771854	166771854	+	Silent	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC27	55622	broad.mit.edu	37	2	32983498	32983498	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC3	7267	broad.mit.edu	37	21	38460490	38460490	+	Intron	SNP	A	G	G	rs113343952		TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTF1	7270	broad.mit.edu	37	9	135266240	135266240	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTLL5	23093	broad.mit.edu	37	14	76241935	76241935	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTLL7	79739	broad.mit.edu	37	1	84399389	84399389	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179414788	179414788	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179429534	179429534	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179457383	179457383	+	Silent	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179543389	179543389	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179554016	179554016	+	Splice_Site	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179554424	179554424	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179580223	179580223	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179597060	179597060	+	Frame_Shift_Del	DEL	C	-	-			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179605493	179605493	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179658342	179658342	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTYH2	94015	broad.mit.edu	37	17	72245641	72245641	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTYH2	94015	broad.mit.edu	37	17	72246394	72246394	+	Intron	DEL	C	-	-			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBA3C	7278	broad.mit.edu	37	13	19755785	19755785	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBB4Q	56604	broad.mit.edu	37	4	190903771	190903771	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBB4Q	56604	broad.mit.edu	37	4	190903786	190903786	+	Silent	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBGCP2	10844	broad.mit.edu	37	10	135103475	135103475	+	Splice_Site	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TULP2	7288	broad.mit.edu	37	19	49388630	49388630	+	Intron	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUSC3	7991	broad.mit.edu	37	8	15615367	15615367	+	Intron	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TXNDC12	51060	broad.mit.edu	37	1	52492898	52492898	+	Intron	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TXNDC2	84203	broad.mit.edu	37	18	9887330	9887330	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TXNDC8	255220	broad.mit.edu	37	9	113088319	113088319	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBAP2L	9898	broad.mit.edu	37	1	154238972	154238972	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE2A	7319	broad.mit.edu	37	X	118717129	118717129	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE2CBP	90025	broad.mit.edu	37	6	83602681	83602681	+	3'UTR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE2K	3093	broad.mit.edu	37	4	39780016	39780016	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE2U	148581	broad.mit.edu	37	1	64707453	64707453	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBN1	29855	broad.mit.edu	37	16	4927035	4927035	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR4	23352	broad.mit.edu	37	1	19518771	19518771	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGDH	7358	broad.mit.edu	37	4	39512025	39512025	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT1A8	54576	broad.mit.edu	37	2	234526371	234526371	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT3A1	133688	broad.mit.edu	37	5	35988535	35988535	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UHRF2	115426	broad.mit.edu	37	9	6413470	6413470	+	5'UTR	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UHRF2	115426	broad.mit.edu	37	9	6477747	6477747	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC13C	440279	broad.mit.edu	37	15	54305853	54305853	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC45B	146862	broad.mit.edu	37	17	33482441	33482441	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC5A	90249	broad.mit.edu	37	5	176301474	176301474	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC5B	219699	broad.mit.edu	37	10	73057592	73057592	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC5D	137970	broad.mit.edu	37	8	35616772	35616772	+	Intron	SNP	G	T	T	rs144571753	by1000genomes	TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC5D	137970	broad.mit.edu	37	8	35647902	35647902	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH1G	124590	broad.mit.edu	37	17	72916385	72916385	+	Silent	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	215803338	215803338	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	215916493	215916493	+	Intron	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216219777	216219777	+	Silent	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216243506	216243506	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216372967	216372967	+	Splice_Site	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216595681	216595681	+	5'UTR	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP15	9958	broad.mit.edu	37	12	62708623	62708623	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP28	57646	broad.mit.edu	37	11	113679687	113679687	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP36	57602	broad.mit.edu	37	17	76799373	76799373	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP51	158880	broad.mit.edu	37	X	55513992	55513992	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP9X	8239	broad.mit.edu	37	X	41075817	41075817	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USPL1	10208	broad.mit.edu	37	13	31231663	31231663	+	Silent	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UXS1	80146	broad.mit.edu	37	2	106710472	106710472	+	3'UTR	SNP	A	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	20639463	20639463	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	21536798	21536798	+	IGR	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	37233095	37233095	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	37626432	37626432	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	37626950	37626950	+	IGR	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	38943372	38943372	+	IGR	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	43063012	43063012	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	43197685	43197685	+	IGR	SNP	A	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	43221414	43221414	+	IGR	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	52487302	52487302	+	IGR	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	57428060	57428060	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	66814298	66814298	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	66929204	66929204	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	89402414	89402414	+	IGR	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	113111717	113111717	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	18932509	18932509	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	304140	304140	+	IGR	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	39183112	39183112	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	40106001	40106001	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	4496542	4496542	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49007561	49007561	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49007645	49007645	+	IGR	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49055612	49055612	+	IGR	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49860946	49860946	+	IGR	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	50129949	50129949	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	51458657	51458657	+	IGR	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	51527023	51527023	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55093665	55093665	+	IGR	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	57995356	57995356	+	IGR	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	6015973	6015973	+	IGR	SNP	A	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	6150261	6150261	+	IGR	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	67700826	67700826	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	67701026	67701026	+	IGR	SNP	A	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	71279794	71279794	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	90847864	90847864	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	127802252	127802252	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	128800394	128800394	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	20094894	20094894	+	IGR	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	20095105	20095105	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	38423451	38423451	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	38597556	38597556	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	42463782	42463782	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	53701227	53701227	+	IGR	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	76509607	76509607	+	IGR	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	19400733	19400733	+	IGR	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	19466597	19466597	+	IGR	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	19538181	19538181	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	19539566	19539566	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	53982939	53982939	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	57888939	57888939	+	IGR	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	59103073	59103073	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	65884431	65884431	+	IGR	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	65884441	65884441	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	87871431	87871431	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	88543629	88543629	+	IGR	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	91924559	91924559	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	19475474	19475474	+	IGR	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	19585380	19585380	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20147194	20147194	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22070784	22070784	+	IGR	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	42024950	42024950	+	IGR	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	45329734	45329734	+	IGR	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	58096682	58096682	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	81712890	81712890	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	95100642	95100642	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	20433960	20433960	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	20456721	20456721	+	IGR	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	20456828	20456828	+	IGR	DEL	G	-	-	rs56331633	by1000genomes	TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	22013108	22013108	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	22482794	22482794	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	27890560	27890560	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	29049839	29049839	+	IGR	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	30132831	30132831	+	IGR	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	31083555	31083555	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	60060818	60060818	+	IGR	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	60164421	60164421	+	IGR	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	60164602	60164602	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	62552258	62552258	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	79851681	79851681	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	79851787	79851787	+	IGR	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	20168318	20168318	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32368345	32368345	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32374981	32374981	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32399610	32399610	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32489451	32489451	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32616836	32616836	+	IGR	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33396081	33396081	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33500725	33500725	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33768504	33768504	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33816182	33816182	+	IGR	SNP	A	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33961766	33961766	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	55813546	55813546	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	62524346	62524346	+	IGR	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	70478571	70478571	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	84255786	84255786	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	14608529	14608529	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	20674847	20674847	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	2490669	2490669	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	26075266	26075266	+	IGR	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	29335198	29335198	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	49580539	49580539	+	IGR	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	64194388	64194388	+	IGR	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	66185403	66185403	+	IGR	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	69617146	69617146	+	IGR	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	12915	12915	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	14613856	14613856	+	IGR	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	14630488	14630488	+	IGR	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	26232383	26232383	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	8413248	8413248	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	14963648	14963648	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	14975300	14975300	+	IGR	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	22497428	22497428	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	22966750	22966750	+	IGR	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	23031261	23031261	+	IGR	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	35874369	35874369	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	43877160	43877160	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	51430573	51430573	+	IGR	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	53202416	53202416	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	105976626	105976626	+	IGR	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	117284092	117284092	+	IGR	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	146524121	146524121	+	IGR	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	148903768	148903768	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149047835	149047835	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149060300	149060300	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149096519	149096519	+	IGR	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149103972	149103972	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149105922	149105922	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149424943	149424943	+	IGR	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	157043433	157043433	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	158424436	158424436	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	160905610	160905610	+	IGR	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	166245424	166245424	+	IGR	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	16877174	16877174	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	16877252	16877252	+	IGR	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	171652272	171652272	+	IGR	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	182152071	182152071	+	IGR	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	191115960	191115960	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	192215896	192215896	+	IGR	SNP	A	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	209441213	209441213	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	220487512	220487512	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	228302735	228302735	+	IGR	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	229825236	229825236	+	IGR	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	241995731	241995731	+	IGR	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	242156929	242156929	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	248004203	248004203	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	248286162	248286162	+	IGR	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	248637700	248637700	+	IGR	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	249065845	249065845	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	26608728	26608728	+	IGR	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	73570931	73570931	+	IGR	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	77166092	77166092	+	IGR	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	79521159	79521159	+	IGR	SNP	A	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	79521192	79521192	+	IGR	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	81564553	81564553	+	IGR	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	81564676	81564676	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	10330081	10330081	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	11589242	11589242	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	12360656	12360656	+	IGR	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	12361922	12361922	+	IGR	SNP	A	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	21469241	21469241	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	29874182	29874182	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	37243984	37243984	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	14917037	14917037	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	16130172	16130172	+	IGR	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	21760615	21760615	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	34986138	34986138	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	34986713	34986713	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	101126198	101126198	+	IGR	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	113690755	113690755	+	IGR	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	128824857	128824857	+	IGR	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	130893693	130893693	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	132349374	132349374	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	13554926	13554926	+	IGR	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	159719782	159719782	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	176190112	176190112	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	187867621	187867621	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	208992855	208992855	+	IGR	DEL	C	-	-			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	52798432	52798432	+	IGR	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	73360995	73360995	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	7465036	7465036	+	IGR	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	79390712	79390712	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	81424599	81424599	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	81425378	81425378	+	IGR	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	81425559	81425559	+	IGR	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	85718823	85718823	+	IGR	SNP	G	C	C	rs115281305	by1000genomes	TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91885991	91885991	+	IGR	DEL	A	-	-			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91924922	91924922	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91936484	91936484	+	IGR	SNP	G	A	A	rs139126142	by1000genomes	TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91955389	91955389	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	114998598	114998598	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	116545972	116545972	+	IGR	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	142895568	142895568	+	IGR	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	147309377	147309377	+	IGR	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	149181786	149181786	+	IGR	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	149182606	149182606	+	IGR	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	149700341	149700341	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	161146903	161146903	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	1637547	1637547	+	IGR	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	180042339	180042339	+	IGR	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	18580113	18580113	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	20054142	20054142	+	IGR	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	26057637	26057637	+	IGR	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	27047339	27047339	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	35258432	35258432	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	88998214	88998214	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	90263059	90263059	+	IGR	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	96068334	96068334	+	IGR	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	96069212	96069212	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	98030776	98030776	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	104494691	104494691	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	145767762	145767762	+	IGR	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	146377827	146377827	+	IGR	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	171526320	171526320	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	17554075	17554075	+	IGR	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	179207991	179207991	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	184301947	184301947	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	189309451	189309451	+	IGR	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	190396160	190396160	+	IGR	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	29751311	29751311	+	IGR	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	43901328	43901329	+	IGR	DNP	AG	CT	CT			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	70172695	70172695	+	IGR	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	88815309	88815309	+	IGR	SNP	A	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	9024802	9024802	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	9386417	9386417	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	95117173	95117173	+	IGR	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	117115238	117115238	+	IGR	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	120952027	120952027	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	180722023	180722023	+	IGR	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	23689211	23689211	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	29882430	29882430	+	IGR	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	31109807	31109807	+	IGR	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	41586220	41586220	+	IGR	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	53156045	53156045	+	IGR	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	56719812	56719812	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	75207199	75207199	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	83042751	83042751	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	97361700	97361700	+	IGR	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	99284282	99284282	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	108325649	108325649	+	IGR	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	142383967	142383968	+	IGR	DNP	CC	AA	AA			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	144521827	144521827	+	IGR	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	17582451	17582451	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	27179672	27179672	+	IGR	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	28700064	28700064	+	IGR	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	54467843	54467843	+	IGR	SNP	A	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	66803791	66803791	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	71762005	71762005	+	IGR	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	80775464	80775464	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	88986519	88986519	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	126935842	126935842	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	136399173	136399173	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	140697891	140697891	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	143855096	143855096	+	IGR	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	144708173	144708173	+	IGR	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	145281270	145281270	+	IGR	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	152143552	152143552	+	IGR	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	27088144	27088144	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	56356462	56356462	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	56718363	56718363	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	57216853	57216853	+	IGR	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	57216858	57216858	+	IGR	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	57268969	57268969	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	65536164	65536164	+	IGR	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	82286401	82286401	+	IGR	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	88194655	88194655	+	IGR	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	92099434	92099434	+	IGR	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	120493452	120493452	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	128098962	128098962	+	IGR	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	138709137	138709137	+	IGR	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	30778768	30778768	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	31077829	31077829	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	50652757	50652757	+	IGR	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	50653435	50653435	+	IGR	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	5706293	5706293	+	IGR	SNP	A	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	61300055	61300055	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	64049116	64049116	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	64049129	64049129	+	IGR	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	7217792	7217792	+	IGR	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	7877774	7877774	+	IGR	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	80483559	80483559	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	80484364	80484364	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	83204249	83204249	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	102068043	102068043	+	IGR	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	15527652	15527652	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	30689778	30689778	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	30800593	30800593	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	30832119	30832119	+	IGR	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	31254682	31254682	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	33662247	33662247	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	35957080	35957080	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	43314058	43314058	+	IGR	SNP	T	A	A	rs139158244	by1000genomes	TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	43400783	43400783	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	44076151	44076151	+	IGR	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	44077067	44077067	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	44153840	44153840	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	67334233	67334233	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	68315640	68315640	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	68371882	68371882	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	70711671	70711672	+	IGR	DNP	GG	TT	TT			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	76090328	76090328	+	IGR	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	84675479	84675479	+	IGR	SNP	A	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	91585867	91585867	+	IGR	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	115807631	115807631	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	118012206	118012206	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	118355102	118355102	+	IGR	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	122251164	122251164	+	IGR	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	123414417	123414417	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	137570170	137570170	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	138529718	138529718	+	IGR	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	147134243	147134243	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	147546209	147546209	+	IGR	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	148889998	148889998	+	IGR	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	23094075	23094075	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	26705996	26705996	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	27537379	27537379	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	37402815	37402815	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	47662894	47662894	+	IGR	DEL	C	-	-			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	48022349	48022349	+	IGR	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	48183725	48183725	+	IGR	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	52862152	52862152	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	54698987	54698987	+	IGR	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	65294736	65294736	+	IGR	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	74962205	74962205	+	IGR	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	79828424	79828424	+	IGR	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	85340270	85340270	+	IGR	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	85340770	85340770	+	IGR	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	85340887	85340887	+	IGR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	87624282	87624282	+	IGR	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	87624286	87624287	+	IGR	DNP	CC	AA	AA			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	Y	59001471	59001471	+	IGR	SNP	C	T	T	rs74753464		TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAPA	9218	broad.mit.edu	37	18	9936982	9936982	+	Splice_Site	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VARS2	57176	broad.mit.edu	37	6	30888132	30888132	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAV3	10451	broad.mit.edu	37	1	108116591	108116591	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAV3	10451	broad.mit.edu	37	1	108138975	108138975	+	Intron	SNP	A	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VCX	26609	broad.mit.edu	37	X	7811752	7811752	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VEGFC	7424	broad.mit.edu	37	4	177604990	177604991	+	3'UTR	INS	-	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VEGFC	7424	broad.mit.edu	37	4	177632898	177632898	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VIL1	7429	broad.mit.edu	37	2	219292998	219292998	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13C	54832	broad.mit.edu	37	15	62276213	62276213	+	Splice_Site	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS16	64601	broad.mit.edu	37	20	2843727	2843727	+	Missense_Mutation	SNP	A	T	T	rs150495430	byFrequency	TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS16	64601	broad.mit.edu	37	20	2847154	2847154	+	Silent	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS18	57617	broad.mit.edu	37	15	41188326	41188326	+	Intron	SNP	G	T	T	rs149774376	by1000genomes	TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS41	27072	broad.mit.edu	37	7	38768139	38768139	+	Intron	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS52	6293	broad.mit.edu	37	6	33236392	33236392	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VWA3A	146177	broad.mit.edu	37	16	22144268	22144268	+	Silent	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VWA5A	4013	broad.mit.edu	37	11	124006697	124006697	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VWCE	220001	broad.mit.edu	37	11	61032536	61032536	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WASF1	8936	broad.mit.edu	37	6	110429644	110429644	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WBSCR17	64409	broad.mit.edu	37	7	70885805	70885805	+	Intron	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WBSCR17	64409	broad.mit.edu	37	7	71135038	71135038	+	Silent	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDFY3	23001	broad.mit.edu	37	4	85716011	85716011	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR17	116966	broad.mit.edu	37	4	177056385	177056385	+	Missense_Mutation	SNP	C	T	T	rs113488450		TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR3	10885	broad.mit.edu	37	1	118482105	118482105	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR44	54521	broad.mit.edu	37	X	117577637	117577637	+	Nonsense_Mutation	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR48	57599	broad.mit.edu	37	3	39110337	39110337	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR49	151790	broad.mit.edu	37	3	167217820	167217820	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR60	55112	broad.mit.edu	37	7	158711520	158711520	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR72	256764	broad.mit.edu	37	15	54007479	54007479	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR7	23335	broad.mit.edu	37	18	54349805	54349805	+	Intron	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR7	23335	broad.mit.edu	37	18	54424253	54424253	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR91	29062	broad.mit.edu	37	7	134879797	134879797	+	Silent	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDYHV1	55093	broad.mit.edu	37	8	124448786	124448786	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WEE1	7465	broad.mit.edu	37	11	9598729	9598729	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WEE2	494551	broad.mit.edu	37	7	141423010	141423010	+	Silent	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNK1	65125	broad.mit.edu	37	12	863591	863591	+	Intron	SNP	G	T	T	rs72647376		TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNK2	65268	broad.mit.edu	37	9	96000634	96000634	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WRN	7486	broad.mit.edu	37	8	30954341	30954341	+	Silent	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WRN	7486	broad.mit.edu	37	8	31004915	31004915	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WWC3	55841	broad.mit.edu	37	X	10062039	10062039	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WWC3	55841	broad.mit.edu	37	X	10094125	10094125	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XDH	7498	broad.mit.edu	37	2	31573112	31573112	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIAP	331	broad.mit.edu	37	X	123020298	123020298	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIAP	331	broad.mit.edu	37	X	123040876	123040876	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIRP1	165904	broad.mit.edu	37	3	39225675	39225675	+	Silent	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIRP2	129446	broad.mit.edu	37	2	168067243	168067243	+	Splice_Site	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIRP2	129446	broad.mit.edu	37	2	168096499	168096499	+	Intron	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIRP2	129446	broad.mit.edu	37	2	168101659	168101659	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIRP2	129446	broad.mit.edu	37	2	168101938	168101938	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIRP2	129446	broad.mit.edu	37	2	168102125	168102125	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIRP2	129446	broad.mit.edu	37	2	168102604	168102604	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIST	7503	broad.mit.edu	37	X	73071761	73071762	+	RNA	INS	-	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XKR3	150165	broad.mit.edu	37	22	17264941	17264941	+	Silent	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XKR3	150165	broad.mit.edu	37	22	17265283	17265283	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XKR4	114786	broad.mit.edu	37	8	56367337	56367337	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XKR6	286046	broad.mit.edu	37	8	10755822	10755822	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPNPEP2	7512	broad.mit.edu	37	X	128886270	128886270	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPNPEP2	7512	broad.mit.edu	37	X	128896679	128896679	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPR1	9213	broad.mit.edu	37	1	180772791	180772791	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YSK4	80122	broad.mit.edu	37	2	135743912	135743912	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBBX	79740	broad.mit.edu	37	3	167016055	167016056	+	Intron	DNP	AG	TA	TA			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB16	7704	broad.mit.edu	37	11	114120921	114120921	+	Intron	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB26	57684	broad.mit.edu	37	9	125682049	125682049	+	Silent	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB7B	51043	broad.mit.edu	37	1	154987854	154987854	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZDBF2	57683	broad.mit.edu	37	2	207170027	207170027	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZDHHC19	131540	broad.mit.edu	37	3	195936325	195936325	+	Silent	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZDHHC8	29801	broad.mit.edu	37	22	20127060	20127060	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZEB1	6935	broad.mit.edu	37	10	31810711	31810711	+	Silent	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX4	79776	broad.mit.edu	37	8	77620045	77620045	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFPM2	23414	broad.mit.edu	37	8	106813843	106813843	+	Silent	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFPM2	23414	broad.mit.edu	37	8	106814156	106814156	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFYVE1	53349	broad.mit.edu	37	14	73459868	73459868	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZIC3	7547	broad.mit.edu	37	X	136652400	136652400	+	3'UTR	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMIZ1	57178	broad.mit.edu	37	10	81065336	81065336	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMIZ2	83637	broad.mit.edu	37	7	44797437	44797437	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMYM3	9203	broad.mit.edu	37	X	70462303	70462303	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF10	7556	broad.mit.edu	37	12	133732389	133732389	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF215	7762	broad.mit.edu	37	11	6977658	6977658	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF215	7762	broad.mit.edu	37	11	6977683	6977683	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF232	7775	broad.mit.edu	37	17	5012905	5012905	+	Silent	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF238	10472	broad.mit.edu	37	1	244217638	244217638	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF257	113835	broad.mit.edu	37	19	22256393	22256393	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF268	10795	broad.mit.edu	37	12	133768687	133768687	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF304	57343	broad.mit.edu	37	19	57867973	57867973	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF320	162967	broad.mit.edu	37	19	53393592	53393592	+	Intron	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF334	55713	broad.mit.edu	37	20	45129994	45129994	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF33B	7582	broad.mit.edu	37	10	43089497	43089497	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF341	84905	broad.mit.edu	37	20	32344880	32344880	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF347	84671	broad.mit.edu	37	19	53643421	53643421	+	3'UTR	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF37B	100129482	broad.mit.edu	37	10	43051117	43051117	+	5'Flank	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF383	163087	broad.mit.edu	37	19	37721334	37721334	+	5'UTR	SNP	A	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF385D	79750	broad.mit.edu	37	3	21478591	21478591	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF385D	79750	broad.mit.edu	37	3	21606240	21606240	+	Intron	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF395	55893	broad.mit.edu	37	8	28304794	28304794	+	Intron	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF398	57541	broad.mit.edu	37	7	148875854	148875854	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF418	147686	broad.mit.edu	37	19	58438039	58438039	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF454	285676	broad.mit.edu	37	5	178391974	178391974	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF460	10794	broad.mit.edu	37	19	57803158	57803158	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF461	92283	broad.mit.edu	37	19	37130105	37130105	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF479	90827	broad.mit.edu	37	7	57187958	57187958	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF479	90827	broad.mit.edu	37	7	57188160	57188160	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF479	90827	broad.mit.edu	37	7	57188767	57188767	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF479	90827	broad.mit.edu	37	7	57194477	57194477	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF485	220992	broad.mit.edu	37	10	44101005	44101005	+	5'Flank	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF488	118738	broad.mit.edu	37	10	48370425	48370425	+	5'UTR	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF497	162968	broad.mit.edu	37	19	58868093	58868093	+	Silent	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF536	9745	broad.mit.edu	37	19	31039467	31039467	+	Silent	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF536	9745	broad.mit.edu	37	19	31040234	31040234	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF559	84527	broad.mit.edu	37	19	9452555	9452555	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF560	147741	broad.mit.edu	37	19	9585018	9585018	+	Intron	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF585B	92285	broad.mit.edu	37	19	37680982	37680982	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF592	9640	broad.mit.edu	37	15	85345528	85345528	+	Frame_Shift_Del	DEL	G	-	-			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF595	152687	broad.mit.edu	37	4	59182	59182	+	Intron	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF616	90317	broad.mit.edu	37	19	52633911	52633911	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF630	57232	broad.mit.edu	37	X	47920198	47920198	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF673	55634	broad.mit.edu	37	X	46322729	46322729	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF675	171392	broad.mit.edu	37	19	23845011	23845011	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF678	339500	broad.mit.edu	37	1	227842034	227842034	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF692	55657	broad.mit.edu	37	1	249152402	249152402	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF695	57116	broad.mit.edu	37	1	247163448	247163448	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF75D	7626	broad.mit.edu	37	X	134425074	134425075	+	Intron	INS	-	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF761	388561	broad.mit.edu	37	19	53950458	53950458	+	5'UTR	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF79	7633	broad.mit.edu	37	9	130197409	130197409	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF804A	91752	broad.mit.edu	37	2	185802585	185802585	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF804B	219578	broad.mit.edu	37	7	88965810	88965810	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF833	401898	broad.mit.edu	37	19	11777172	11777172	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF90	7643	broad.mit.edu	37	19	20211321	20211321	+	Intron	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF99	7652	broad.mit.edu	37	19	22940339	22940339	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNHIT3	9326	broad.mit.edu	37	17	34842459	34842459	+	5'Flank	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZP4	57829	broad.mit.edu	37	1	238049329	238049329	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZP4	57829	broad.mit.edu	37	1	238053757	238053757	+	Intron	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSCAN18	65982	broad.mit.edu	37	19	58600232	58600232	+	Intron	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSCAN1	284312	broad.mit.edu	37	19	58564975	58564975	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSCAN1	284312	broad.mit.edu	37	19	58565079	58565079	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSCAN4	201516	broad.mit.edu	37	19	58189271	58189271	+	Intron	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSCAN4	201516	broad.mit.edu	37	19	58189945	58189945	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSWIM2	151112	broad.mit.edu	37	2	187693111	187693111	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSWIM2	151112	broad.mit.edu	37	2	187694448	187694448	+	Intron	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSWIM2	151112	broad.mit.edu	37	2	187703818	187703818	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZWINT	11130	broad.mit.edu	37	10	58118794	58118794	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZWINT	11130	broad.mit.edu	37	10	58119778	58119778	+	Splice_Site	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	30993397	30993397	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	104779697	104779697	+	5'Flank	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	30930677	30930677	+	Intron	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	74564308	74564308	+	Intron	SNP	A	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	76445005	76445005	+	5'Flank	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22180802	22180802	+	RNA	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22219172	22219172	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22574056	22574056	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22631734	22631734	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	66479861	66479861	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	102316105	102316105	+	5'Flank	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	44020763	44020763	+	Intron	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	84907979	84907979	+	RNA	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32192535	32192535	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33784683	33784683	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	25746785	25746785	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	26598246	26598246	+	5'Flank	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	45127455	45127455	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	25033606	25033606	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	34584071	34584071	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	142660097	142660097	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	142803591	142803591	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	148889680	148889680	+	RNA	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	17385410	17385410	+	5'Flank	SNP	C	A	A	rs148419568	by1000genomes	TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	18844930	18844930	+	RNA	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	12163895	12163895	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	65894297	65894297	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89160436	89160436	+	RNA	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89320093	89320093	+	Intron	SNP	T	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89952813	89952813	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89967462	89967462	+	Intron	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	95601068	95601068	+	RNA	SNP	G	T	T	rs149834505	by1000genomes	TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	113950504	113950504	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	180491274	180491274	+	Intron	SNP	A	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	180538681	180538681	+	Intron	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	24170533	24170533	+	Intron	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	9897145	9897145	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	100552062	100552062	+	RNA	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142013520	142013520	+	Intron	SNP	G	C	C			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142021006	142021006	+	Intron	SNP	T	G	G			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142028318	142028318	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142099936	142099936	+	Intron	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142240031	142240031	+	Intron	SNP	G	T	T			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142457276	142457276	+	Intron	SNP	T	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	21277951	21277951	+	RNA	SNP	C	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	66514035	66514035	+	Intron	SNP	G	A	A			TCGA-05-4427-01A-21D-1855-08	TCGA-05-4427-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
