Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
A2ML1	144568	broad.mit.edu	37	12	8991101	8991101	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
A2ML1	144568	broad.mit.edu	37	12	8991101	8991101	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AACS	65985	broad.mit.edu	37	12	125576036	125576036	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AACS	65985	broad.mit.edu	37	12	125576036	125576036	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA6	23460	broad.mit.edu	37	17	67080517	67080517	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA6	23460	broad.mit.edu	37	17	67080517	67080517	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA8	10351	broad.mit.edu	37	17	66872911	66872911	+	Intron	SNP	C	A	A	rs113143298		TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA8	10351	broad.mit.edu	37	17	66883272	66883272	+	Splice_Site	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA8	10351	broad.mit.edu	37	17	66872911	66872911	+	Intron	SNP	C	A	A	rs113143298		TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA8	10351	broad.mit.edu	37	17	66883272	66883272	+	Splice_Site	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB1	5243	broad.mit.edu	37	7	87150195	87150195	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB1	5243	broad.mit.edu	37	7	87150195	87150195	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC3	8714	broad.mit.edu	37	17	48733380	48733380	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC3	8714	broad.mit.edu	37	17	48733380	48733380	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABI3BP	25890	broad.mit.edu	37	3	100566523	100566523	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABL2	27	broad.mit.edu	37	1	179102295	179102295	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABL2	27	broad.mit.edu	37	1	179102295	179102295	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACACB	32	broad.mit.edu	37	12	109613836	109613836	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACACB	32	broad.mit.edu	37	12	109613836	109613836	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACRBP	84519	broad.mit.edu	37	12	6749349	6749349	+	Silent	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACRBP	84519	broad.mit.edu	37	12	6749349	6749349	+	Silent	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM2A	123876	broad.mit.edu	37	16	20492070	20492070	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSS3	79611	broad.mit.edu	37	12	81536858	81536858	+	Intron	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSS3	79611	broad.mit.edu	37	12	81536858	81536858	+	Intron	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTL8	81569	broad.mit.edu	37	1	18152740	18152740	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTL8	81569	broad.mit.edu	37	1	18152740	18152740	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTR3	10096	broad.mit.edu	37	2	114691787	114691787	+	Intron	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTR3	10096	broad.mit.edu	37	2	114691787	114691787	+	Intron	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106725112	106725112	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	107062518	107062518	+	RNA	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106725112	106725112	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	107062518	107062518	+	RNA	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS10	81794	broad.mit.edu	37	19	8651427	8651427	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS10	81794	broad.mit.edu	37	19	8657674	8657674	+	Silent	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS10	81794	broad.mit.edu	37	19	8651427	8651427	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS10	81794	broad.mit.edu	37	19	8657674	8657674	+	Silent	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS12	81792	broad.mit.edu	37	5	33576335	33576335	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS12	81792	broad.mit.edu	37	5	33576335	33576335	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS13	11093	broad.mit.edu	37	9	136290614	136290614	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS13	11093	broad.mit.edu	37	9	136290614	136290614	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS17	170691	broad.mit.edu	37	15	100801810	100801810	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS17	170691	broad.mit.edu	37	15	100801810	100801810	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS2	9509	broad.mit.edu	37	5	178581891	178581891	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS2	9509	broad.mit.edu	37	5	178581891	178581891	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAR	103	broad.mit.edu	37	1	154560582	154560582	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAR	103	broad.mit.edu	37	1	154573599	154573599	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAR	103	broad.mit.edu	37	1	154560582	154560582	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAR	103	broad.mit.edu	37	1	154573599	154573599	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY2	108	broad.mit.edu	37	5	7789797	7789797	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY2	108	broad.mit.edu	37	5	7789797	7789797	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY8	114	broad.mit.edu	37	8	131826459	131826459	+	Silent	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY8	114	broad.mit.edu	37	8	131826459	131826459	+	Silent	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADK	132	broad.mit.edu	37	10	76131436	76131436	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADK	132	broad.mit.edu	37	10	76131436	76131436	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADSS	159	broad.mit.edu	37	1	244600239	244600239	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADSS	159	broad.mit.edu	37	1	244600239	244600239	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AEBP1	165	broad.mit.edu	37	7	44149642	44149642	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AEBP1	165	broad.mit.edu	37	7	44149642	44149642	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGA	175	broad.mit.edu	37	4	178361559	178361559	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGA	175	broad.mit.edu	37	4	178361559	178361559	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGBL1	123624	broad.mit.edu	37	15	87066167	87066167	+	Silent	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGBL1	123624	broad.mit.edu	37	15	87066167	87066167	+	Silent	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHCTF1	25909	broad.mit.edu	37	1	247079428	247079428	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHCTF1	25909	broad.mit.edu	37	1	247079428	247079428	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHI1	54806	broad.mit.edu	37	6	135787305	135787305	+	Silent	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHI1	54806	broad.mit.edu	37	6	135787305	135787305	+	Silent	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AIP	9049	broad.mit.edu	37	11	67250704	67250704	+	Silent	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AIP	9049	broad.mit.edu	37	11	67250704	67250704	+	Silent	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AK5	26289	broad.mit.edu	37	1	77763335	77763335	+	Silent	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AK5	26289	broad.mit.edu	37	1	77763337	77763337	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AK5	26289	broad.mit.edu	37	1	77876659	77876659	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AK5	26289	broad.mit.edu	37	1	77763335	77763335	+	Silent	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AK5	26289	broad.mit.edu	37	1	77763337	77763337	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AK5	26289	broad.mit.edu	37	1	77876659	77876659	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKAP13	11214	broad.mit.edu	37	15	86273625	86273625	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKAP13	11214	broad.mit.edu	37	15	86273625	86273625	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKR1B10	57016	broad.mit.edu	37	7	134222989	134222989	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALAS2	212	broad.mit.edu	37	X	55052311	55052311	+	Silent	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALAS2	212	broad.mit.edu	37	X	55052311	55052311	+	Silent	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALG10	84920	broad.mit.edu	37	12	34175705	34175705	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALG10	84920	broad.mit.edu	37	12	34175705	34175705	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALK	238	broad.mit.edu	37	2	29551314	29551314	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALK	238	broad.mit.edu	37	2	29551314	29551314	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALMS1	7840	broad.mit.edu	37	2	73680958	73680958	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALMS1	7840	broad.mit.edu	37	2	73680958	73680958	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALOX5AP	241	broad.mit.edu	37	13	31309834	31309834	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALOX5AP	241	broad.mit.edu	37	13	31309834	31309834	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMAC1	146861	broad.mit.edu	37	17	33520323	33520323	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMAC1	146861	broad.mit.edu	37	17	33520323	33520323	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMBRA1	55626	broad.mit.edu	37	11	46439359	46439359	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMBRA1	55626	broad.mit.edu	37	11	46439359	46439359	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMZ1	155185	broad.mit.edu	37	7	2740399	2740399	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMZ1	155185	broad.mit.edu	37	7	2740399	2740399	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK1	286	broad.mit.edu	37	8	41554116	41554116	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK1	286	broad.mit.edu	37	8	41554116	41554116	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD36	375248	broad.mit.edu	37	2	97860624	97860624	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD36	375248	broad.mit.edu	37	2	97860624	97860624	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD42	338699	broad.mit.edu	37	11	82917011	82917011	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD42	338699	broad.mit.edu	37	11	82917011	82917011	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD5	63926	broad.mit.edu	37	20	10030676	10030676	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD5	63926	broad.mit.edu	37	20	10030676	10030676	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD7	56311	broad.mit.edu	37	7	117864800	117864800	+	5'UTR	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD7	56311	broad.mit.edu	37	7	117864800	117864800	+	5'UTR	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKS1B	56899	broad.mit.edu	37	12	100200327	100200327	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKS1B	56899	broad.mit.edu	37	12	100205877	100205877	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKS1B	56899	broad.mit.edu	37	12	99145221	99145221	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKS1B	56899	broad.mit.edu	37	12	100200327	100200327	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKS1B	56899	broad.mit.edu	37	12	100205877	100205877	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO3	63982	broad.mit.edu	37	11	26465281	26465281	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO3	63982	broad.mit.edu	37	11	26465281	26465281	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANXA13	312	broad.mit.edu	37	8	124701206	124701206	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANXA13	312	broad.mit.edu	37	8	124701206	124701206	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APAF1	317	broad.mit.edu	37	12	99065268	99065268	+	Intron	SNP	T	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APAF1	317	broad.mit.edu	37	12	99065268	99065268	+	Intron	SNP	T	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOB	338	broad.mit.edu	37	2	21265357	21265357	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOB	338	broad.mit.edu	37	2	21265357	21265357	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP29	9411	broad.mit.edu	37	1	94668512	94668512	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP29	9411	broad.mit.edu	37	1	94668650	94668650	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP29	9411	broad.mit.edu	37	1	94668512	94668512	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP29	9411	broad.mit.edu	37	1	94668650	94668650	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP36	158763	broad.mit.edu	37	X	130220361	130220361	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP36	158763	broad.mit.edu	37	X	130220361	130220361	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF17	9828	broad.mit.edu	37	11	73077012	73077012	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF17	9828	broad.mit.edu	37	11	73077012	73077012	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF3	50650	broad.mit.edu	37	3	56771215	56771215	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF3	50650	broad.mit.edu	37	3	56771215	56771215	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARMC6	93436	broad.mit.edu	37	19	19166660	19166660	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARMC6	93436	broad.mit.edu	37	19	19166660	19166660	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASAP3	55616	broad.mit.edu	37	1	23759638	23759638	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASAP3	55616	broad.mit.edu	37	1	23759638	23759638	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASB11	140456	broad.mit.edu	37	X	15311352	15311352	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASXL3	80816	broad.mit.edu	37	18	31322919	31322919	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASXL3	80816	broad.mit.edu	37	18	31322919	31322919	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATAD2B	54454	broad.mit.edu	37	2	23980608	23980608	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATAD2B	54454	broad.mit.edu	37	2	23980608	23980608	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP13A2	23400	broad.mit.edu	37	1	17322790	17322790	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP13A2	23400	broad.mit.edu	37	1	17322790	17322790	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1A3	478	broad.mit.edu	37	19	42492226	42492226	+	Silent	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1A3	478	broad.mit.edu	37	19	42492226	42492226	+	Silent	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2B2	491	broad.mit.edu	37	3	10491257	10491257	+	5'UTR	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2B2	491	broad.mit.edu	37	3	10491257	10491257	+	5'UTR	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2B4	493	broad.mit.edu	37	1	203652479	203652479	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2B4	493	broad.mit.edu	37	1	203652479	203652479	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6V0A1	535	broad.mit.edu	37	17	40666456	40666456	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6V0A1	535	broad.mit.edu	37	17	40666456	40666456	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP9B	374868	broad.mit.edu	37	18	76856370	76856370	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP9B	374868	broad.mit.edu	37	18	76856370	76856370	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATPBD4	89978	broad.mit.edu	37	15	35814569	35814569	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATRX	546	broad.mit.edu	37	X	76777597	76777597	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATRX	546	broad.mit.edu	37	X	76777597	76777597	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AXL	558	broad.mit.edu	37	19	41745172	41745172	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AXL	558	broad.mit.edu	37	19	41745172	41745172	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAI2	576	broad.mit.edu	37	1	32221746	32221746	+	Missense_Mutation	SNP	G	C	C	rs149675901		TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAI3	577	broad.mit.edu	37	6	70049174	70049174	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAI3	577	broad.mit.edu	37	6	70049174	70049174	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCL11A	53335	broad.mit.edu	37	2	60689653	60689653	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCL11A	53335	broad.mit.edu	37	2	60689653	60689653	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCL9L	283149	broad.mit.edu	37	11	118779239	118779239	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCL9L	283149	broad.mit.edu	37	11	118779239	118779239	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCLAF1	9774	broad.mit.edu	37	6	136582513	136582513	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCLAF1	9774	broad.mit.edu	37	6	136589341	136589341	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCLAF1	9774	broad.mit.edu	37	6	136582513	136582513	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCLAF1	9774	broad.mit.edu	37	6	136589341	136589341	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCOR	54880	broad.mit.edu	37	X	39923699	39923699	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCOR	54880	broad.mit.edu	37	X	39923699	39923699	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BEYLA	497634	broad.mit.edu	37	8	47752020	47752020	+	5'Flank	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BEYLA	497634	broad.mit.edu	37	8	47752020	47752020	+	5'Flank	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BGN	633	broad.mit.edu	37	X	152771462	152771462	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BGN	633	broad.mit.edu	37	X	152771462	152771462	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BIN2	51411	broad.mit.edu	37	12	51717786	51717786	+	Intron	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BIN2	51411	broad.mit.edu	37	12	51717786	51717786	+	Intron	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMP2	650	broad.mit.edu	37	20	6759046	6759046	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMP2	650	broad.mit.edu	37	20	6759046	6759046	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMP8A	353500	broad.mit.edu	37	1	39991331	39991331	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMP8A	353500	broad.mit.edu	37	1	39991331	39991331	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BNIP3	664	broad.mit.edu	37	10	133784503	133784503	+	Intron	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BNIP3	664	broad.mit.edu	37	10	133784503	133784503	+	Intron	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BPI	671	broad.mit.edu	37	20	36938790	36938790	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BPI	671	broad.mit.edu	37	20	36938790	36938790	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BPTF	2186	broad.mit.edu	37	17	65936499	65936499	+	Intron	SNP	A	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BPTF	2186	broad.mit.edu	37	17	65936499	65936499	+	Intron	SNP	A	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRCC3	79184	broad.mit.edu	37	X	154344446	154344446	+	Silent	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRD2	6046	broad.mit.edu	37	6	32940530	32940531	+	5'UTR	DNP	GG	TT	TT			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRD2	6046	broad.mit.edu	37	6	32940530	32940531	+	5'UTR	DNP	GG	TT	TT			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRWD1	54014	broad.mit.edu	37	21	40590349	40590349	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRWD1	54014	broad.mit.edu	37	21	40590349	40590349	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf119	79892	broad.mit.edu	37	10	121595096	121595096	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf119	79892	broad.mit.edu	37	10	121595096	121595096	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf16	56673	broad.mit.edu	37	11	8950884	8950884	+	Intron	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf16	56673	broad.mit.edu	37	11	8950884	8950884	+	Intron	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf48	79081	broad.mit.edu	37	11	62435066	62435066	+	Nonsense_Mutation	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C13orf34	79866	broad.mit.edu	37	13	73319246	73319246	+	Silent	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf149	112849	broad.mit.edu	37	14	59942718	59942718	+	Nonsense_Mutation	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf149	112849	broad.mit.edu	37	14	59942718	59942718	+	Nonsense_Mutation	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf57	90416	broad.mit.edu	37	15	40846368	40846368	+	Intron	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf57	90416	broad.mit.edu	37	15	40846368	40846368	+	Intron	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C16orf62	57020	broad.mit.edu	37	16	19586383	19586383	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C16orf62	57020	broad.mit.edu	37	16	19586383	19586383	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf57	124989	broad.mit.edu	37	17	45481415	45481415	+	Intron	DEL	T	-	-			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf98	388381	broad.mit.edu	37	17	36993484	36993484	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf110	339512	broad.mit.edu	37	1	162825238	162825238	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf110	339512	broad.mit.edu	37	1	162825238	162825238	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf127	148345	broad.mit.edu	37	1	11015007	11015007	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf127	148345	broad.mit.edu	37	1	11015007	11015007	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf129	80133	broad.mit.edu	37	1	170959103	170959103	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf55	163859	broad.mit.edu	37	1	226187006	226187006	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf55	163859	broad.mit.edu	37	1	226187006	226187006	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf24	55969	broad.mit.edu	37	20	35240678	35240678	+	3'UTR	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf24	55969	broad.mit.edu	37	20	35240678	35240678	+	3'UTR	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf26	26074	broad.mit.edu	37	20	20051546	20051546	+	Silent	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf26	26074	broad.mit.edu	37	20	20051546	20051546	+	Silent	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C21orf56	84221	broad.mit.edu	37	21	47581788	47581788	+	Intron	SNP	C	A	A	rs114359056	by1000genomes	TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C21orf56	84221	broad.mit.edu	37	21	47581788	47581788	+	Intron	SNP	C	A	A	rs114359056	by1000genomes	TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf39	92749	broad.mit.edu	37	2	26672836	26672836	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf39	92749	broad.mit.edu	37	2	26672836	26672836	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf40	84417	broad.mit.edu	37	2	106688297	106688297	+	Intron	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf40	84417	broad.mit.edu	37	2	106688297	106688297	+	Intron	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf52	151477	broad.mit.edu	37	2	232373893	232373893	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf52	151477	broad.mit.edu	37	2	232373893	232373893	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf86	51057	broad.mit.edu	37	2	63667034	63667034	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf86	51057	broad.mit.edu	37	2	63667034	63667034	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3AR1	719	broad.mit.edu	37	12	8212740	8212740	+	Silent	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3AR1	719	broad.mit.edu	37	12	8212740	8212740	+	Silent	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3	718	broad.mit.edu	37	19	6710817	6710817	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3	718	broad.mit.edu	37	19	6710817	6710817	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf37	285555	broad.mit.edu	37	4	98902433	98902433	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf37	285555	broad.mit.edu	37	4	98902433	98902433	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf42	65250	broad.mit.edu	37	5	37201763	37201763	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf42	65250	broad.mit.edu	37	5	37201763	37201763	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf10	10665	broad.mit.edu	37	6	32261492	32261493	+	Missense_Mutation	DNP	CC	TT	TT			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf10	10665	broad.mit.edu	37	6	32261492	32261493	+	Missense_Mutation	DNP	CC	TT	TT			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf118	168090	broad.mit.edu	37	6	165706746	165706746	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf118	168090	broad.mit.edu	37	6	165706746	165706746	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf127	340204	broad.mit.edu	37	6	35754984	35754984	+	Intron	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf127	340204	broad.mit.edu	37	6	35754984	35754984	+	Intron	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf146	222826	broad.mit.edu	37	6	4074639	4074639	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf146	222826	broad.mit.edu	37	6	4074639	4074639	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf50	84310	broad.mit.edu	37	7	1037473	1037473	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf50	84310	broad.mit.edu	37	7	1037473	1037473	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8orf74	203076	broad.mit.edu	37	8	10555137	10555137	+	Silent	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8orf74	203076	broad.mit.edu	37	8	10555137	10555137	+	Silent	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CA4	762	broad.mit.edu	37	17	58236712	58236712	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CA4	762	broad.mit.edu	37	17	58236712	58236712	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1D	776	broad.mit.edu	37	3	53777182	53777182	+	Intron	SNP	T	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1D	776	broad.mit.edu	37	3	53777182	53777182	+	Intron	SNP	T	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA2D4	93589	broad.mit.edu	37	12	1965188	1965188	+	Silent	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA2D4	93589	broad.mit.edu	37	12	1965188	1965188	+	Silent	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNB1	782	broad.mit.edu	37	17	37334427	37334428	+	Intron	INS	-	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNG3	10368	broad.mit.edu	37	16	24372571	24372571	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNG3	10368	broad.mit.edu	37	16	24372571	24372571	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CADM3	57863	broad.mit.edu	37	1	159163167	159163167	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CADM3	57863	broad.mit.edu	37	1	159163167	159163167	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CADPS	8618	broad.mit.edu	37	3	62477974	62477974	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CADPS	8618	broad.mit.edu	37	3	62477974	62477974	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALCR	799	broad.mit.edu	37	7	93055917	93055917	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALCR	799	broad.mit.edu	37	7	93055917	93055917	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMK2G	818	broad.mit.edu	37	10	75587728	75587728	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMK2G	818	broad.mit.edu	37	10	75587728	75587728	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMK4	814	broad.mit.edu	37	5	110560283	110560283	+	Silent	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMK4	814	broad.mit.edu	37	5	110560283	110560283	+	Silent	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMSAP1L1	23271	broad.mit.edu	37	1	200827089	200827089	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPN6	827	broad.mit.edu	37	X	110494870	110494870	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CBFA2T3	863	broad.mit.edu	37	16	88958492	88958492	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CBFA2T3	863	broad.mit.edu	37	16	88958492	88958492	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC147	159686	broad.mit.edu	37	10	106166457	106166457	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC147	159686	broad.mit.edu	37	10	106166457	106166457	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC158	339965	broad.mit.edu	37	4	77300479	77300479	+	Silent	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC158	339965	broad.mit.edu	37	4	77300479	77300479	+	Silent	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC28B	79140	broad.mit.edu	37	1	32670241	32670241	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC28B	79140	broad.mit.edu	37	1	32670241	32670241	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC83	220047	broad.mit.edu	37	11	85593661	85593661	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC83	220047	broad.mit.edu	37	11	85593661	85593661	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCL15	6359	broad.mit.edu	37	17	34325505	34325505	+	Intron	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCR10	2826	broad.mit.edu	37	17	40831557	40831557	+	3'UTR	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCR10	2826	broad.mit.edu	37	17	40831557	40831557	+	3'UTR	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCT2	10576	broad.mit.edu	37	12	69991418	69991418	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCT2	10576	broad.mit.edu	37	12	69991418	69991418	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCT6A	908	broad.mit.edu	37	7	56125662	56125662	+	Intron	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCT6A	908	broad.mit.edu	37	7	56125662	56125662	+	Intron	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD109	135228	broad.mit.edu	37	6	74502554	74502554	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD109	135228	broad.mit.edu	37	6	74502554	74502554	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD300LB	124599	broad.mit.edu	37	17	72522083	72522083	+	Silent	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD300LB	124599	broad.mit.edu	37	17	72522083	72522083	+	Silent	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD3G	917	broad.mit.edu	37	11	118222510	118222510	+	Intron	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD3G	917	broad.mit.edu	37	11	118222510	118222510	+	Intron	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD55	1604	broad.mit.edu	37	1	207498073	207498073	+	Silent	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD55	1604	broad.mit.edu	37	1	207498073	207498073	+	Silent	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD5	921	broad.mit.edu	37	11	60885907	60885907	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD5	921	broad.mit.edu	37	11	60885907	60885907	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD86	942	broad.mit.edu	37	3	121825068	121825068	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD86	942	broad.mit.edu	37	3	121825068	121825068	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC20B	166979	broad.mit.edu	37	5	54415705	54415705	+	Silent	SNP	T	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC45	8318	broad.mit.edu	37	22	19506441	19506441	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH10	1008	broad.mit.edu	37	5	24535743	24535743	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH10	1008	broad.mit.edu	37	5	24493047	24493047	+	Intron	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH10	1008	broad.mit.edu	37	5	24535743	24535743	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH12	1010	broad.mit.edu	37	5	21854749	21854749	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH12	1010	broad.mit.edu	37	5	21975400	21975400	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH12	1010	broad.mit.edu	37	5	21854749	21854749	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH12	1010	broad.mit.edu	37	5	21975400	21975400	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH18	1016	broad.mit.edu	37	5	19473207	19473207	+	3'UTR	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH18	1016	broad.mit.edu	37	5	19473207	19473207	+	3'UTR	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH18	1016	broad.mit.edu	37	5	19747105	19747105	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH9	1007	broad.mit.edu	37	5	26902655	26902655	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH9	1007	broad.mit.edu	37	5	26906079	26906079	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH9	1007	broad.mit.edu	37	5	26988490	26988490	+	Splice_Site	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH9	1007	broad.mit.edu	37	5	26902655	26902655	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH9	1007	broad.mit.edu	37	5	26906079	26906079	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH9	1007	broad.mit.edu	37	5	26988490	26988490	+	Splice_Site	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDHR3	222256	broad.mit.edu	37	7	105662544	105662544	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDHR3	222256	broad.mit.edu	37	7	105662817	105662817	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDHR3	222256	broad.mit.edu	37	7	105662544	105662544	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDHR3	222256	broad.mit.edu	37	7	105662817	105662817	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK11B	984	broad.mit.edu	37	1	1635608	1635608	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK11B	984	broad.mit.edu	37	1	1635608	1635608	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK2AP2	10263	broad.mit.edu	37	11	67274736	67274736	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK2AP2	10263	broad.mit.edu	37	11	67274736	67274736	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDKL3	51265	broad.mit.edu	37	5	133702187	133702187	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDKL3	51265	broad.mit.edu	37	5	133702187	133702187	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDNF	441549	broad.mit.edu	37	10	14862181	14862181	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDNF	441549	broad.mit.edu	37	10	14862181	14862181	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP350	9857	broad.mit.edu	37	1	179989900	179989900	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP350	9857	broad.mit.edu	37	1	179989900	179989900	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFH	3075	broad.mit.edu	37	1	196696041	196696041	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFH	3075	broad.mit.edu	37	1	196696041	196696041	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CGRRF1	10668	broad.mit.edu	37	14	55004779	55004779	+	Splice_Site	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CGRRF1	10668	broad.mit.edu	37	14	55004779	55004779	+	Splice_Site	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD8	57680	broad.mit.edu	37	14	21860803	21860803	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD8	57680	broad.mit.edu	37	14	21860376	21860376	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD8	57680	broad.mit.edu	37	14	21860803	21860803	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD8	57680	broad.mit.edu	37	14	21863152	21863152	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHL1	10752	broad.mit.edu	37	3	447299	447299	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHL1	10752	broad.mit.edu	37	3	447299	447299	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRDL1	91851	broad.mit.edu	37	X	109943926	109943926	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRDL1	91851	broad.mit.edu	37	X	109943926	109943926	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRM2	1129	broad.mit.edu	37	7	136623134	136623134	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CIZ1	25792	broad.mit.edu	37	9	130941408	130941408	+	Nonsense_Mutation	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CIZ1	25792	broad.mit.edu	37	9	130941408	130941408	+	Nonsense_Mutation	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CKAP5	9793	broad.mit.edu	37	11	46786761	46786761	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CKAP5	9793	broad.mit.edu	37	11	46786761	46786761	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCN4	1183	broad.mit.edu	37	X	10174905	10174905	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCN4	1183	broad.mit.edu	37	X	10174905	10174905	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC18C	283971	broad.mit.edu	37	16	70065846	70065846	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLK2P	1197	broad.mit.edu	37	7	23625596	23625596	+	Translation_Start_Site	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLK2P	1197	broad.mit.edu	37	7	23625596	23625596	+	Translation_Start_Site	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLK4	57396	broad.mit.edu	37	5	178045738	178045738	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLK4	57396	broad.mit.edu	37	5	178045738	178045738	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNGA2	1260	broad.mit.edu	37	X	150911089	150911089	+	Silent	SNP	G	T	T	rs146197221	byFrequency	TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNGB3	54714	broad.mit.edu	37	8	87587995	87587996	+	3'UTR	DNP	GG	TT	TT			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNGB3	54714	broad.mit.edu	37	8	87587995	87587996	+	3'UTR	DNP	GG	TT	TT			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNN1	1264	broad.mit.edu	37	19	11657616	11657616	+	Intron	SNP	C	A	A	rs147357819	by1000genomes	TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNN1	1264	broad.mit.edu	37	19	11657616	11657616	+	Intron	SNP	C	A	A	rs147357819	by1000genomes	TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN3	5067	broad.mit.edu	37	3	74334570	74334570	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COBRA1	25920	broad.mit.edu	37	9	140151270	140151270	+	Intron	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COBRA1	25920	broad.mit.edu	37	9	140151270	140151270	+	Intron	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COG2	22796	broad.mit.edu	37	1	230814766	230814766	+	Silent	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COG2	22796	broad.mit.edu	37	1	230814766	230814766	+	Silent	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103474110	103474110	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103474110	103474110	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL2A1	1280	broad.mit.edu	37	12	48388310	48388310	+	Intron	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL2A1	1280	broad.mit.edu	37	12	48388310	48388310	+	Intron	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A4	1286	broad.mit.edu	37	2	227946780	227946780	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A4	1286	broad.mit.edu	37	2	227946780	227946780	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A2	1290	broad.mit.edu	37	2	189929292	189929292	+	Silent	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A2	1290	broad.mit.edu	37	2	189929292	189929292	+	Silent	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL6A1	1291	broad.mit.edu	37	21	47422709	47422709	+	Intron	SNP	A	G	G	rs113707678		TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL6A3	1293	broad.mit.edu	37	2	238283131	238283131	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL6A3	1293	broad.mit.edu	37	2	238283131	238283131	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL7A1	1294	broad.mit.edu	37	3	48608499	48608499	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL7A1	1294	broad.mit.edu	37	3	48620085	48620085	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL7A1	1294	broad.mit.edu	37	3	48608499	48608499	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL7A1	1294	broad.mit.edu	37	3	48620085	48620085	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COLEC12	81035	broad.mit.edu	37	18	321670	321670	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COLEC12	81035	broad.mit.edu	37	18	321670	321670	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPSF4	10898	broad.mit.edu	37	7	99051674	99051674	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPSF4	10898	broad.mit.edu	37	7	99051674	99051674	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPXM1	56265	broad.mit.edu	37	20	2775109	2775112	+	Intron	DEL	AATT	-	-			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPZ	8532	broad.mit.edu	37	4	8608444	8608444	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPZ	8532	broad.mit.edu	37	4	8608444	8608444	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CR1L	1379	broad.mit.edu	37	1	207870915	207870915	+	Silent	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CR1L	1379	broad.mit.edu	37	1	207870915	207870915	+	Silent	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRB1	23418	broad.mit.edu	37	1	197326027	197326027	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRB1	23418	broad.mit.edu	37	1	197326027	197326027	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRISP2	7180	broad.mit.edu	37	6	49668344	49668344	+	Intron	SNP	T	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRISP2	7180	broad.mit.edu	37	6	49668344	49668344	+	Intron	SNP	T	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSF2RB	1439	broad.mit.edu	37	22	37329055	37329055	+	Intron	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSF2RB	1439	broad.mit.edu	37	22	37329055	37329055	+	Intron	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	3063023	3063023	+	Intron	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	3063023	3063023	+	Intron	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD2	114784	broad.mit.edu	37	1	34092195	34092195	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD2	114784	broad.mit.edu	37	1	34049270	34049270	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD2	114784	broad.mit.edu	37	1	34092195	34092195	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113299475	113299475	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113323147	113323147	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113299475	113299475	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113323147	113323147	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSPP1	79848	broad.mit.edu	37	8	68070788	68070788	+	Missense_Mutation	SNP	A	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSPP1	79848	broad.mit.edu	37	8	68070788	68070788	+	Missense_Mutation	SNP	A	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSRNP2	81566	broad.mit.edu	37	12	51470324	51470324	+	Silent	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSRNP2	81566	broad.mit.edu	37	12	51470324	51470324	+	Silent	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTCFL	140690	broad.mit.edu	37	20	56093924	56093924	+	Missense_Mutation	SNP	C	T	T	rs143392924		TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA1	1495	broad.mit.edu	37	5	138147834	138147834	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA1	1495	broad.mit.edu	37	5	138147834	138147834	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTR9	9646	broad.mit.edu	37	11	10781721	10781721	+	Silent	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTR9	9646	broad.mit.edu	37	11	10781721	10781721	+	Silent	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUBN	8029	broad.mit.edu	37	10	17026057	17026057	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUBN	8029	broad.mit.edu	37	10	17026057	17026057	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUL4B	8450	broad.mit.edu	37	X	119694494	119694494	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUL4B	8450	broad.mit.edu	37	X	119694494	119694494	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUX1	1523	broad.mit.edu	37	7	101877296	101877296	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUX1	1523	broad.mit.edu	37	7	101877296	101877296	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXorf22	170063	broad.mit.edu	37	X	35969251	35969251	+	Silent	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXorf22	170063	broad.mit.edu	37	X	35969251	35969251	+	Silent	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYLC2	1539	broad.mit.edu	37	9	105768193	105768193	+	3'UTR	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP11A1	1583	broad.mit.edu	37	15	74630854	74630854	+	Intron	SNP	T	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP11A1	1583	broad.mit.edu	37	15	74630854	74630854	+	Intron	SNP	T	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP2B6	1555	broad.mit.edu	37	19	41515256	41515256	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP2B6	1555	broad.mit.edu	37	19	41515256	41515256	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DACH2	117154	broad.mit.edu	37	X	85969469	85969469	+	Intron	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DACH2	117154	broad.mit.edu	37	X	85969469	85969469	+	Intron	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAZL	1618	broad.mit.edu	37	3	16633473	16633473	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAZL	1618	broad.mit.edu	37	3	16633473	16633473	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DBX2	440097	broad.mit.edu	37	12	45417664	45417664	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DBX2	440097	broad.mit.edu	37	12	45417664	45417664	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF4L2	138009	broad.mit.edu	37	8	88885671	88885671	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF4L2	138009	broad.mit.edu	37	8	88885671	88885671	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCDC1	341019	broad.mit.edu	37	11	31312426	31312426	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCDC1	341019	broad.mit.edu	37	11	31312426	31312426	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCHS2	54798	broad.mit.edu	37	4	155236879	155236879	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCHS2	54798	broad.mit.edu	37	4	155236879	155236879	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCLK3	85443	broad.mit.edu	37	3	36779105	36779105	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCLK3	85443	broad.mit.edu	37	3	36779105	36779105	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCN	1634	broad.mit.edu	37	12	91546752	91546752	+	Intron	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDR1	780	broad.mit.edu	37	6	30862315	30862315	+	Silent	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDR1	780	broad.mit.edu	37	6	30862315	30862315	+	Silent	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX17	10521	broad.mit.edu	37	22	38890696	38890696	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX17	10521	broad.mit.edu	37	22	38890696	38890696	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX3X	1654	broad.mit.edu	37	X	41196624	41196624	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX3X	1654	broad.mit.edu	37	X	41196688	41196688	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX3X	1654	broad.mit.edu	37	X	41196754	41196754	+	Intron	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX3X	1654	broad.mit.edu	37	X	41196624	41196624	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX3X	1654	broad.mit.edu	37	X	41196688	41196688	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX3X	1654	broad.mit.edu	37	X	41196754	41196754	+	Intron	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX46	9879	broad.mit.edu	37	5	134147115	134147115	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX46	9879	broad.mit.edu	37	5	134147433	134147433	+	Silent	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX46	9879	broad.mit.edu	37	5	134147115	134147115	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX46	9879	broad.mit.edu	37	5	134147433	134147433	+	Silent	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX50	79009	broad.mit.edu	37	10	70694186	70694186	+	Intron	SNP	T	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX50	79009	broad.mit.edu	37	10	70694186	70694186	+	Intron	SNP	T	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEFB121	245934	broad.mit.edu	37	20	29992946	29992946	+	Intron	SNP	T	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEFB121	245934	broad.mit.edu	37	20	29992946	29992946	+	Intron	SNP	T	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND5A	23258	broad.mit.edu	37	11	9164867	9164867	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND5A	23258	broad.mit.edu	37	11	9164867	9164867	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKB	1607	broad.mit.edu	37	7	14217662	14217662	+	Missense_Mutation	SNP	A	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKB	1607	broad.mit.edu	37	7	14217662	14217662	+	Missense_Mutation	SNP	A	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKH	160851	broad.mit.edu	37	13	42772547	42772547	+	Intron	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKH	160851	broad.mit.edu	37	13	42772547	42772547	+	Intron	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX29	54505	broad.mit.edu	37	5	54573088	54573088	+	Nonsense_Mutation	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX29	54505	broad.mit.edu	37	5	54573088	54573088	+	Nonsense_Mutation	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIO2	1734	broad.mit.edu	37	14	80668656	80668656	+	3'UTR	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIO2	1734	broad.mit.edu	37	14	80668656	80668656	+	3'UTR	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIP2B	57609	broad.mit.edu	37	12	51108375	51108375	+	Silent	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIP2B	57609	broad.mit.edu	37	12	51108375	51108375	+	Silent	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLG3	1741	broad.mit.edu	37	X	69717029	69717029	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLG3	1741	broad.mit.edu	37	X	69717029	69717029	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMD	1756	broad.mit.edu	37	X	32482742	32482742	+	Silent	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMD	1756	broad.mit.edu	37	X	32482742	32482742	+	Silent	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMXL2	23312	broad.mit.edu	37	15	51743895	51743895	+	Splice_Site	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMXL2	23312	broad.mit.edu	37	15	51743895	51743895	+	Splice_Site	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH10	196385	broad.mit.edu	37	12	124323158	124323158	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH10	196385	broad.mit.edu	37	12	124323158	124323158	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH11	8701	broad.mit.edu	37	7	21621705	21621705	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH11	8701	broad.mit.edu	37	7	21621705	21621705	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH3	55567	broad.mit.edu	37	16	21011877	21011877	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH3	55567	broad.mit.edu	37	16	21011877	21011877	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH5	1767	broad.mit.edu	37	5	13737491	13737491	+	Silent	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH5	1767	broad.mit.edu	37	5	13830679	13830679	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH5	1767	broad.mit.edu	37	5	13737491	13737491	+	Silent	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH5	1767	broad.mit.edu	37	5	13769343	13769343	+	Intron	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH5	1767	broad.mit.edu	37	5	13830679	13830679	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH7	56171	broad.mit.edu	37	2	196915752	196915752	+	Intron	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH7	56171	broad.mit.edu	37	2	196915752	196915752	+	Intron	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH8	1769	broad.mit.edu	37	6	38723882	38723882	+	Intron	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH8	1769	broad.mit.edu	37	6	38828217	38828217	+	Intron	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH8	1769	broad.mit.edu	37	6	38723882	38723882	+	Intron	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH8	1769	broad.mit.edu	37	6	38828217	38828217	+	Intron	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11687720	11687720	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11687720	11687720	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNMT3B	1789	broad.mit.edu	37	20	31387846	31387846	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNMT3B	1789	broad.mit.edu	37	20	31387846	31387846	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK2	1794	broad.mit.edu	37	5	169423144	169423144	+	Silent	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK2	1794	broad.mit.edu	37	5	169423144	169423144	+	Silent	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPEP1	1800	broad.mit.edu	37	16	89704489	89704489	+	Silent	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPEP1	1800	broad.mit.edu	37	16	89704574	89704574	+	Missense_Mutation	SNP	T	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPEP1	1800	broad.mit.edu	37	16	89704489	89704489	+	Silent	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPEP1	1800	broad.mit.edu	37	16	89704574	89704574	+	Missense_Mutation	SNP	T	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP6	1804	broad.mit.edu	37	7	154598682	154598682	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP6	1804	broad.mit.edu	37	7	154598682	154598682	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPY19L3	147991	broad.mit.edu	37	19	32949374	32949374	+	Silent	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPY19L3	147991	broad.mit.edu	37	19	32949374	32949374	+	Silent	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPYSL3	1809	broad.mit.edu	37	5	146798049	146798049	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPYSL3	1809	broad.mit.edu	37	5	146798049	146798049	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DRG1	4733	broad.mit.edu	37	22	31795830	31795830	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DRG1	4733	broad.mit.edu	37	22	31795830	31795830	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSC1	1823	broad.mit.edu	37	18	28710701	28710701	+	Intron	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSC1	1823	broad.mit.edu	37	18	28710701	28710701	+	Intron	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSCAM	1826	broad.mit.edu	37	21	41496029	41496029	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSCAM	1826	broad.mit.edu	37	21	41496029	41496029	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSG3	1830	broad.mit.edu	37	18	29039937	29039937	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSG3	1830	broad.mit.edu	37	18	29039937	29039937	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DTNA	1837	broad.mit.edu	37	18	32373974	32373974	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DTNA	1837	broad.mit.edu	37	18	32373974	32373974	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUS2L	54920	broad.mit.edu	37	16	68109434	68109434	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUS2L	54920	broad.mit.edu	37	16	68109434	68109434	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP11	8446	broad.mit.edu	37	2	74000985	74000985	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP11	8446	broad.mit.edu	37	2	74000985	74000985	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP22	56940	broad.mit.edu	37	6	348324	348324	+	Intron	SNP	G	C	C	rs143435851	by1000genomes	TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP22	56940	broad.mit.edu	37	6	348324	348324	+	Intron	SNP	G	C	C	rs143435851	by1000genomes	TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP9	1852	broad.mit.edu	37	X	152915422	152915422	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP9	1852	broad.mit.edu	37	X	152915422	152915422	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
E2F3	1871	broad.mit.edu	37	6	20490382	20490382	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
E2F3	1871	broad.mit.edu	37	6	20490382	20490382	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ECT2	1894	broad.mit.edu	37	3	172500075	172500075	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ECT2	1894	broad.mit.edu	37	3	172500075	172500075	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EEF1A1P9	441032	broad.mit.edu	37	4	106405888	106405888	+	5'UTR	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EEF1A1P9	441032	broad.mit.edu	37	4	106405888	106405888	+	5'UTR	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFEMP2	30008	broad.mit.edu	37	11	65637376	65637376	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFEMP2	30008	broad.mit.edu	37	11	65637376	65637376	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGFLAM	133584	broad.mit.edu	37	5	38426958	38426958	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGFLAM	133584	broad.mit.edu	37	5	38426958	38426958	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGFLAM	133584	broad.mit.edu	37	5	38464232	38464232	+	3'UTR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGFR	1956	broad.mit.edu	37	7	55266314	55266314	+	Intron	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGFR	1956	broad.mit.edu	37	7	55266314	55266314	+	Intron	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EHMT1	79813	broad.mit.edu	37	9	140646769	140646769	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EHMT1	79813	broad.mit.edu	37	9	140646769	140646769	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EHMT2	10919	broad.mit.edu	37	6	31857313	31857313	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EHMT2	10919	broad.mit.edu	37	6	31857313	31857313	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF2C2	27161	broad.mit.edu	37	8	141570642	141570642	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF2C2	27161	broad.mit.edu	37	8	141570642	141570642	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF3B	8662	broad.mit.edu	37	7	2411397	2411398	+	Intron	INS	-	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF4E2	9470	broad.mit.edu	37	2	233422773	233422773	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF4E2	9470	broad.mit.edu	37	2	233422773	233422773	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENO1	2023	broad.mit.edu	37	1	8927929	8927929	+	Intron	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENO1	2023	broad.mit.edu	37	1	8927929	8927929	+	Intron	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENPP2	5168	broad.mit.edu	37	8	120596124	120596124	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENPP3	5169	broad.mit.edu	37	6	131996333	131996333	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENPP3	5169	broad.mit.edu	37	6	131996333	131996333	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENTPD6	955	broad.mit.edu	37	20	25203651	25203651	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENTPD6	955	broad.mit.edu	37	20	25203651	25203651	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB41L2	2037	broad.mit.edu	37	6	131277563	131277563	+	Silent	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB41L2	2037	broad.mit.edu	37	6	131277563	131277563	+	Silent	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB42	2038	broad.mit.edu	37	15	43500462	43500462	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB42	2038	broad.mit.edu	37	15	43500462	43500462	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA2	1969	broad.mit.edu	37	1	16461352	16461352	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA2	1969	broad.mit.edu	37	1	16461352	16461352	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB1	2047	broad.mit.edu	37	3	134880876	134880876	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB1	2047	broad.mit.edu	37	3	134880876	134880876	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB6	2051	broad.mit.edu	37	7	142563293	142563293	+	Missense_Mutation	SNP	G	A	A	rs143088751		TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB6	2051	broad.mit.edu	37	7	142563293	142563293	+	Missense_Mutation	SNP	G	A	A	rs143088751		TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPRS	2058	broad.mit.edu	37	1	220152160	220152160	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPRS	2058	broad.mit.edu	37	1	220152160	220152160	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPS15	2060	broad.mit.edu	37	1	51860177	51860177	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPS15	2060	broad.mit.edu	37	1	51860177	51860177	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPS8L3	79574	broad.mit.edu	37	1	110301168	110301168	+	Silent	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPS8L3	79574	broad.mit.edu	37	1	110301168	110301168	+	Silent	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERBB3	2065	broad.mit.edu	37	12	56488991	56488991	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERBB3	2065	broad.mit.edu	37	12	56488991	56488991	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERBB4	2066	broad.mit.edu	37	2	212576896	212576896	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERBB4	2066	broad.mit.edu	37	2	212576896	212576896	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERCC6L	54821	broad.mit.edu	37	X	71426054	71426055	+	Frame_Shift_Ins	INS	-	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERCC6L	54821	broad.mit.edu	37	X	71426054	71426055	+	Frame_Shift_Ins	INS	-	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ETV1	2115	broad.mit.edu	37	7	14027869	14027869	+	Intron	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EZH2	2146	broad.mit.edu	37	7	148544506	148544506	+	Intron	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EZH2	2146	broad.mit.edu	37	7	148544506	148544506	+	Intron	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F13B	2165	broad.mit.edu	37	1	197031046	197031046	+	Silent	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F13B	2165	broad.mit.edu	37	1	197031046	197031046	+	Silent	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F8	2157	broad.mit.edu	37	X	154065930	154065930	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F8	2157	broad.mit.edu	37	X	154157435	154157435	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F8	2157	broad.mit.edu	37	X	154065930	154065930	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F8	2157	broad.mit.edu	37	X	154157435	154157435	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F9	2158	broad.mit.edu	37	X	138644074	138644074	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F9	2158	broad.mit.edu	37	X	138644077	138644077	+	Missense_Mutation	SNP	T	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F9	2158	broad.mit.edu	37	X	138644074	138644074	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F9	2158	broad.mit.edu	37	X	138644077	138644077	+	Missense_Mutation	SNP	T	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FABP1	2168	broad.mit.edu	37	2	88427597	88427597	+	5'Flank	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FABP1	2168	broad.mit.edu	37	2	88427597	88427597	+	5'Flank	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FABP3	2170	broad.mit.edu	37	1	31842275	31842275	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FABP3	2170	broad.mit.edu	37	1	31842275	31842275	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAIM3	9214	broad.mit.edu	37	1	207087253	207087253	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAIM3	9214	broad.mit.edu	37	1	207087253	207087253	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM114A1	92689	broad.mit.edu	37	4	38893400	38893400	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM114A1	92689	broad.mit.edu	37	4	38893400	38893400	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM119A	151194	broad.mit.edu	37	2	208489097	208489097	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM119A	151194	broad.mit.edu	37	2	208489097	208489097	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM123C	205147	broad.mit.edu	37	2	131521386	131521386	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM123C	205147	broad.mit.edu	37	2	131521386	131521386	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM133A	286499	broad.mit.edu	37	X	92965126	92965126	+	Silent	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM133A	286499	broad.mit.edu	37	X	92965126	92965126	+	Silent	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM154A	158297	broad.mit.edu	37	9	18950803	18950803	+	Silent	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM154A	158297	broad.mit.edu	37	9	18950803	18950803	+	Silent	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM159A	348378	broad.mit.edu	37	1	53122761	53122761	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM159A	348378	broad.mit.edu	37	1	53122761	53122761	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM189B	10712	broad.mit.edu	37	1	155218083	155218083	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM189B	10712	broad.mit.edu	37	1	155218083	155218083	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM190A	401145	broad.mit.edu	37	4	91389343	91389343	+	Intron	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM190A	401145	broad.mit.edu	37	4	91701601	91701601	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM190A	401145	broad.mit.edu	37	4	91389343	91389343	+	Intron	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM190A	401145	broad.mit.edu	37	4	91701601	91701601	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM5C	339479	broad.mit.edu	37	1	190067362	190067362	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM5C	339479	broad.mit.edu	37	1	190067362	190067362	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM71D	161142	broad.mit.edu	37	14	67669985	67669985	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM71D	161142	broad.mit.edu	37	14	67669985	67669985	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM8A1	51439	broad.mit.edu	37	6	17606055	17606055	+	Intron	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM8A1	51439	broad.mit.edu	37	6	17606055	17606055	+	Intron	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FANCE	2178	broad.mit.edu	37	6	35424046	35424046	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAP	2191	broad.mit.edu	37	2	163029272	163029272	+	Intron	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAP	2191	broad.mit.edu	37	2	163029272	163029272	+	Intron	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT3	120114	broad.mit.edu	37	11	92613928	92613928	+	Silent	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT3	120114	broad.mit.edu	37	11	92613928	92613928	+	Silent	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT4	79633	broad.mit.edu	37	4	126242659	126242659	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT4	79633	broad.mit.edu	37	4	126242685	126242685	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT4	79633	broad.mit.edu	37	4	126242659	126242659	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT4	79633	broad.mit.edu	37	4	126242685	126242685	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN2	2201	broad.mit.edu	37	5	127641188	127641188	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN2	2201	broad.mit.edu	37	5	127641188	127641188	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXL7	23194	broad.mit.edu	37	5	15500768	15500768	+	5'UTR	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXL7	23194	broad.mit.edu	37	5	15500768	15500768	+	5'UTR	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO42	54455	broad.mit.edu	37	1	16578686	16578686	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO42	54455	broad.mit.edu	37	1	16578686	16578686	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCGR1C	100132417	broad.mit.edu	37	1	149378186	149378186	+	RNA	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCGR1C	100132417	broad.mit.edu	37	1	149378186	149378186	+	RNA	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCGR2B	2213	broad.mit.edu	37	1	161647156	161647156	+	Splice_Site	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCGR2B	2213	broad.mit.edu	37	1	161647156	161647156	+	Splice_Site	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRL1	115350	broad.mit.edu	37	1	157772117	157772117	+	Intron	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRL1	115350	broad.mit.edu	37	1	157772117	157772117	+	Intron	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRLA	84824	broad.mit.edu	37	1	161682099	161682099	+	Intron	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRLA	84824	broad.mit.edu	37	1	161682099	161682099	+	Intron	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FER1L6	654463	broad.mit.edu	37	8	124982199	124982199	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FER1L6	654463	broad.mit.edu	37	8	125076835	125076835	+	Intron	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FER1L6	654463	broad.mit.edu	37	8	124982199	124982199	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FER1L6	654463	broad.mit.edu	37	8	125076835	125076835	+	Intron	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGF13	2258	broad.mit.edu	37	X	137939851	137939852	+	Intron	DNP	CC	AT	AT			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGF13	2258	broad.mit.edu	37	X	137939851	137939852	+	Intron	DNP	CC	AT	AT			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FKBP10	60681	broad.mit.edu	37	17	39974664	39974664	+	Silent	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FKBP10	60681	broad.mit.edu	37	17	39974664	39974664	+	Silent	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG2	388698	broad.mit.edu	37	1	152326042	152326042	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG2	388698	broad.mit.edu	37	1	152326042	152326042	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152277449	152277449	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152281985	152281985	+	Missense_Mutation	SNP	G	T	T	rs138288591		TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152278919	152278919	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLNC	2318	broad.mit.edu	37	7	128480745	128480745	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLNC	2318	broad.mit.edu	37	7	128480745	128480745	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMN2	56776	broad.mit.edu	37	1	240637374	240637374	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FNBP4	23360	broad.mit.edu	37	11	47753978	47753978	+	Intron	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FNBP4	23360	broad.mit.edu	37	11	47753978	47753978	+	Intron	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOLH1B	219595	broad.mit.edu	37	11	89424367	89424367	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOLH1B	219595	broad.mit.edu	37	11	89424367	89424367	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOLR3	2352	broad.mit.edu	37	11	71850699	71850699	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOLR3	2352	broad.mit.edu	37	11	71850699	71850699	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXD4	2298	broad.mit.edu	37	9	118160	118160	+	5'UTR	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXD4	2298	broad.mit.edu	37	9	118160	118160	+	5'UTR	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRAS1	80144	broad.mit.edu	37	4	79301110	79301110	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRAS1	80144	broad.mit.edu	37	4	79301110	79301110	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FREM2	341640	broad.mit.edu	37	13	39263541	39263541	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMD4B	23150	broad.mit.edu	37	3	69225535	69225535	+	Intron	SNP	A	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMD4B	23150	broad.mit.edu	37	3	69225535	69225535	+	Intron	SNP	A	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMD7	90167	broad.mit.edu	37	X	131231309	131231309	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMD7	90167	broad.mit.edu	37	X	131231309	131231309	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSTL5	56884	broad.mit.edu	37	4	162463837	162463837	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSTL5	56884	broad.mit.edu	37	4	162463837	162463837	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FYB	2533	broad.mit.edu	37	5	39202316	39202316	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FYB	2533	broad.mit.edu	37	5	39202316	39202316	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FYTTD1	84248	broad.mit.edu	37	3	197483438	197483438	+	Intron	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FYTTD1	84248	broad.mit.edu	37	3	197483438	197483438	+	Intron	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABBR1	2550	broad.mit.edu	37	6	29541912	29541912	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABBR1	2550	broad.mit.edu	37	6	29541912	29541912	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRB2	2561	broad.mit.edu	37	5	160763718	160763718	+	Silent	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRB2	2561	broad.mit.edu	37	5	160763718	160763718	+	Silent	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRG2	2566	broad.mit.edu	37	5	161524754	161524754	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRG2	2566	broad.mit.edu	37	5	161524754	161524754	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRG3	2567	broad.mit.edu	37	15	27222202	27222202	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRG3	2567	broad.mit.edu	37	15	27222202	27222202	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT10	55568	broad.mit.edu	37	5	153783750	153783750	+	Silent	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT10	55568	broad.mit.edu	37	5	153783750	153783750	+	Silent	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNTL1	57452	broad.mit.edu	37	14	69787324	69787324	+	Intron	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNTL1	57452	broad.mit.edu	37	14	69787324	69787324	+	Intron	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GATA3	2625	broad.mit.edu	37	10	8100177	8100177	+	Intron	SNP	C	G	G	rs148810744	by1000genomes	TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GATA3	2625	broad.mit.edu	37	10	8100177	8100177	+	Intron	SNP	C	G	G	rs148810744	by1000genomes	TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GBP5	115362	broad.mit.edu	37	1	89735201	89735201	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GBP5	115362	broad.mit.edu	37	1	89735201	89735201	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GIMAP1	170575	broad.mit.edu	37	7	150417566	150417566	+	Silent	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GIMAP1	170575	broad.mit.edu	37	7	150417566	150417566	+	Silent	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GK	2710	broad.mit.edu	37	X	30709248	30709248	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GK	2710	broad.mit.edu	37	X	30709248	30709248	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLA	2717	broad.mit.edu	37	X	100653523	100653523	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLA	2717	broad.mit.edu	37	X	100653523	100653523	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLIPR1L2	144321	broad.mit.edu	37	12	75807464	75807464	+	Silent	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLRA3	8001	broad.mit.edu	37	4	175649605	175649605	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLRA3	8001	broad.mit.edu	37	4	175649605	175649605	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNPTAB	79158	broad.mit.edu	37	12	102153964	102153964	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNPTAB	79158	broad.mit.edu	37	12	102153964	102153964	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLGA2B	55592	broad.mit.edu	37	12	100559806	100559806	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GP5	2814	broad.mit.edu	37	3	194118856	194118856	+	Silent	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GP5	2814	broad.mit.edu	37	3	194118856	194118856	+	Silent	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPBP1L1	60313	broad.mit.edu	37	1	46117355	46117355	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPN2	54707	broad.mit.edu	37	1	27215499	27215499	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPN2	54707	broad.mit.edu	37	1	27215499	27215499	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR101	83550	broad.mit.edu	37	X	136113029	136113029	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR101	83550	broad.mit.edu	37	X	136113029	136113029	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR112	139378	broad.mit.edu	37	X	135427235	135427235	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR112	139378	broad.mit.edu	37	X	135427235	135427235	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR124	25960	broad.mit.edu	37	8	37688297	37688297	+	Missense_Mutation	SNP	G	T	T	rs141569533		TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR148	344561	broad.mit.edu	37	2	131486884	131486884	+	Missense_Mutation	SNP	C	T	T	rs142929079		TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR148	344561	broad.mit.edu	37	2	131486884	131486884	+	Missense_Mutation	SNP	C	T	T	rs142929079		TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR158	57512	broad.mit.edu	37	10	25887611	25887611	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR50	9248	broad.mit.edu	37	X	150345268	150345268	+	Silent	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR64	10149	broad.mit.edu	37	X	19020988	19020988	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR64	10149	broad.mit.edu	37	X	19020988	19020988	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPX6	257202	broad.mit.edu	37	6	28483474	28483474	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPX6	257202	broad.mit.edu	37	6	28483474	28483474	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRAMD1B	57476	broad.mit.edu	37	11	123468506	123468506	+	Intron	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRID2	2895	broad.mit.edu	37	4	94690553	94690553	+	Silent	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRID2	2895	broad.mit.edu	37	4	94690553	94690553	+	Silent	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIK4	2900	broad.mit.edu	37	11	120531066	120531066	+	Silent	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIK4	2900	broad.mit.edu	37	11	120531066	120531066	+	Silent	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIN2A	2903	broad.mit.edu	37	16	10032087	10032087	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIN2A	2903	broad.mit.edu	37	16	9857858	9857858	+	Silent	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIN2A	2903	broad.mit.edu	37	16	10032087	10032087	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIN2A	2903	broad.mit.edu	37	16	9857858	9857858	+	Silent	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIN2B	2904	broad.mit.edu	37	12	13906333	13906333	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIN2B	2904	broad.mit.edu	37	12	13906333	13906333	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRK7	131890	broad.mit.edu	37	3	141535733	141535733	+	Silent	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRK7	131890	broad.mit.edu	37	3	141535733	141535733	+	Silent	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM7	2917	broad.mit.edu	37	3	7456635	7456635	+	Intron	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF3C1	2975	broad.mit.edu	37	16	27480913	27480913	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF3C1	2975	broad.mit.edu	37	16	27480913	27480913	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUCY1A3	2982	broad.mit.edu	37	4	156618236	156618236	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUCY1A3	2982	broad.mit.edu	37	4	156618236	156618236	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUK1	2987	broad.mit.edu	37	1	228335394	228335394	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUK1	2987	broad.mit.edu	37	1	228335394	228335394	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HACE1	57531	broad.mit.edu	37	6	105259273	105259273	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HACE1	57531	broad.mit.edu	37	6	105259273	105259273	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HADH	3033	broad.mit.edu	37	4	108948874	108948875	+	Frame_Shift_Ins	INS	-	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HADH	3033	broad.mit.edu	37	4	108948874	108948875	+	Frame_Shift_Ins	INS	-	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAO2	51179	broad.mit.edu	37	1	119929520	119929520	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAO2	51179	broad.mit.edu	37	1	119929520	119929520	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAP1	9001	broad.mit.edu	37	17	39883481	39883481	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAP1	9001	broad.mit.edu	37	17	39883485	39883485	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAP1	9001	broad.mit.edu	37	17	39883481	39883481	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAP1	9001	broad.mit.edu	37	17	39883485	39883485	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAPLN1	1404	broad.mit.edu	37	5	82940367	82940367	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAPLN1	1404	broad.mit.edu	37	5	82940367	82940367	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HBD	3045	broad.mit.edu	37	11	5254362	5254362	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HBD	3045	broad.mit.edu	37	11	5254362	5254362	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HCK	3055	broad.mit.edu	37	20	30672124	30672124	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HCK	3055	broad.mit.edu	37	20	30672124	30672124	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HCN4	10021	broad.mit.edu	37	15	73617680	73617680	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HCN4	10021	broad.mit.edu	37	15	73617680	73617680	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC10	83933	broad.mit.edu	37	22	50685208	50685208	+	Intron	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC10	83933	broad.mit.edu	37	22	50685208	50685208	+	Intron	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDLBP	3069	broad.mit.edu	37	2	242173318	242173318	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDLBP	3069	broad.mit.edu	37	2	242173318	242173318	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDX	139324	broad.mit.edu	37	X	83599336	83599336	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDX	139324	broad.mit.edu	37	X	83599336	83599336	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDX	139324	broad.mit.edu	37	X	83724224	83724224	+	Silent	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HECW2	57520	broad.mit.edu	37	2	197208503	197208503	+	Intron	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HECW2	57520	broad.mit.edu	37	2	197208503	197208503	+	Intron	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEPACAM2	253012	broad.mit.edu	37	7	92825041	92825041	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEPACAM2	253012	broad.mit.edu	37	7	92825041	92825041	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC4	26091	broad.mit.edu	37	10	69714383	69714383	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC4	26091	broad.mit.edu	37	10	69714383	69714383	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC6	55008	broad.mit.edu	37	4	89326274	89326274	+	Intron	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC6	55008	broad.mit.edu	37	4	89326274	89326274	+	Intron	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIP1R	9026	broad.mit.edu	37	12	123343000	123343000	+	Intron	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIP1R	9026	broad.mit.edu	37	12	123343000	123343000	+	Intron	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIP1	3092	broad.mit.edu	37	7	75216183	75216183	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIP1	3092	broad.mit.edu	37	7	75216183	75216183	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H3E	8353	broad.mit.edu	37	6	26225732	26225732	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H3E	8353	broad.mit.edu	37	6	26225732	26225732	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H4I	8294	broad.mit.edu	37	6	27107277	27107277	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H4I	8294	broad.mit.edu	37	6	27107279	27107279	+	Silent	SNP	G	A	A	rs150377743	byFrequency	TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H4I	8294	broad.mit.edu	37	6	27107277	27107277	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H4I	8294	broad.mit.edu	37	6	27107279	27107279	+	Silent	SNP	G	A	A	rs150377743	byFrequency	TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST2H2BF	440689	broad.mit.edu	37	1	149783928	149783928	+	5'UTR	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIVEP3	59269	broad.mit.edu	37	1	42049802	42049802	+	Missense_Mutation	SNP	C	A	A	rs147878871		TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIVEP3	59269	broad.mit.edu	37	1	42049802	42049802	+	Missense_Mutation	SNP	C	A	A	rs147878871		TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HLTF	6596	broad.mit.edu	37	3	148786164	148786164	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HLTF	6596	broad.mit.edu	37	3	148786166	148786166	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HLTF	6596	broad.mit.edu	37	3	148786164	148786164	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HLTF	6596	broad.mit.edu	37	3	148786166	148786166	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRNR	388697	broad.mit.edu	37	1	152192118	152192118	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HS3ST4	9951	broad.mit.edu	37	16	26044040	26044040	+	Intron	DEL	T	-	-			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HS3ST4	9951	broad.mit.edu	37	16	26044040	26044040	+	Intron	DEL	T	-	-			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSD17B12	51144	broad.mit.edu	37	11	43852733	43852733	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSD17B12	51144	broad.mit.edu	37	11	43852733	43852733	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSD17B8	7923	broad.mit.edu	37	6	33172420	33172420	+	5'UTR	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSD17B8	7923	broad.mit.edu	37	6	33172420	33172420	+	5'UTR	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSP90AB2P	391634	broad.mit.edu	37	4	13339545	13339545	+	RNA	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSP90AB2P	391634	broad.mit.edu	37	4	13339545	13339545	+	RNA	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR2C	3358	broad.mit.edu	37	X	114010327	114010327	+	Intron	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR2C	3358	broad.mit.edu	37	X	114141131	114141131	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR2C	3358	broad.mit.edu	37	X	114010327	114010327	+	Intron	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR2C	3358	broad.mit.edu	37	X	114141131	114141131	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR4	3360	broad.mit.edu	37	5	147900526	147900526	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR4	3360	broad.mit.edu	37	5	147900526	147900526	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HYAL4	23553	broad.mit.edu	37	7	123508376	123508376	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HYAL4	23553	broad.mit.edu	37	7	123508376	123508376	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IARS2	55699	broad.mit.edu	37	1	220287726	220287726	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IARS2	55699	broad.mit.edu	37	1	220287726	220287726	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ICAM1	3383	broad.mit.edu	37	19	10395694	10395694	+	Silent	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ICAM1	3383	broad.mit.edu	37	19	10395694	10395694	+	Silent	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IDS	3423	broad.mit.edu	37	X	148564241	148564241	+	3'UTR	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IDS	3423	broad.mit.edu	37	X	148564241	148564241	+	3'UTR	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IER3	8870	broad.mit.edu	37	6	30712023	30712023	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IER3	8870	broad.mit.edu	37	6	30712023	30712023	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFI44	10561	broad.mit.edu	37	1	79128523	79128523	+	Silent	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFI44	10561	broad.mit.edu	37	1	79128523	79128523	+	Silent	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFT140	9742	broad.mit.edu	37	16	1621515	1621515	+	Silent	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFT140	9742	broad.mit.edu	37	16	1621553	1621553	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFT140	9742	broad.mit.edu	37	16	1621515	1621515	+	Silent	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFT140	9742	broad.mit.edu	37	16	1621553	1621553	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFT46	56912	broad.mit.edu	37	11	118430510	118430512	+	In_Frame_Del	DEL	TCC	-	-			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFT46	56912	broad.mit.edu	37	11	118430510	118430512	+	In_Frame_Del	DEL	TCC	-	-			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF3	3321	broad.mit.edu	37	1	117142550	117142550	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF3	3321	broad.mit.edu	37	1	117142550	117142550	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL12A	3592	broad.mit.edu	37	3	159710928	159710928	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL12A	3592	broad.mit.edu	37	3	159710928	159710928	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL13RA2	3598	broad.mit.edu	37	X	114250206	114250206	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL13RA2	3598	broad.mit.edu	37	X	114250206	114250206	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1RAPL2	26280	broad.mit.edu	37	X	105011541	105011541	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL21R	50615	broad.mit.edu	37	16	27441410	27441410	+	Silent	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL21R	50615	broad.mit.edu	37	16	27441410	27441410	+	Silent	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL3RA	3563	broad.mit.edu	37	X	1460679	1460679	+	Silent	SNP	G	T	T	rs138038721	byFrequency	TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL3RA	3563	broad.mit.edu	37	X	1460679	1460679	+	Silent	SNP	G	T	T	rs138038721	byFrequency	TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INPP4B	8821	broad.mit.edu	37	4	143045852	143045852	+	Silent	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INPP4B	8821	broad.mit.edu	37	4	143045852	143045852	+	Silent	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INTS5	80789	broad.mit.edu	37	11	62414465	62414465	+	3'UTR	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INTS5	80789	broad.mit.edu	37	11	62414465	62414465	+	3'UTR	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPMK	253430	broad.mit.edu	37	10	59972626	59972626	+	Intron	SNP	A	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPMK	253430	broad.mit.edu	37	10	59972626	59972626	+	Intron	SNP	A	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPO8	10526	broad.mit.edu	37	12	30789973	30789973	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPO8	10526	broad.mit.edu	37	12	30789973	30789973	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQGAP1	8826	broad.mit.edu	37	15	91019795	91019795	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQGAP1	8826	broad.mit.edu	37	15	91019795	91019795	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQSEC3	440073	broad.mit.edu	37	12	176538	176538	+	5'UTR	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQSEC3	440073	broad.mit.edu	37	12	176538	176538	+	5'UTR	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRAK1	3654	broad.mit.edu	37	X	153284753	153284753	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRAK1	3654	broad.mit.edu	37	X	153284950	153284950	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRAK1	3654	broad.mit.edu	37	X	153284753	153284753	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRAK1	3654	broad.mit.edu	37	X	153284950	153284950	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRX1	79192	broad.mit.edu	37	5	3599846	3599846	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRX1	79192	broad.mit.edu	37	5	3599846	3599846	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ISL1	3670	broad.mit.edu	37	5	50689501	50689501	+	3'UTR	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ISL1	3670	broad.mit.edu	37	5	50689501	50689501	+	3'UTR	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA1	3672	broad.mit.edu	37	5	52145269	52145269	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA1	3672	broad.mit.edu	37	5	52145269	52145269	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA2	3673	broad.mit.edu	37	5	52369034	52369034	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA2	3673	broad.mit.edu	37	5	52369034	52369034	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA4	3676	broad.mit.edu	37	2	182339792	182339792	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA4	3676	broad.mit.edu	37	2	182339792	182339792	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA6	3655	broad.mit.edu	37	2	173362653	173362653	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA6	3655	broad.mit.edu	37	2	173362653	173362653	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA8	8516	broad.mit.edu	37	10	15646286	15646286	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA8	8516	broad.mit.edu	37	10	15646286	15646286	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAL	3683	broad.mit.edu	37	16	30522247	30522247	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAL	3683	broad.mit.edu	37	16	30522247	30522247	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAX	3687	broad.mit.edu	37	16	31373976	31373976	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAX	3687	broad.mit.edu	37	16	31373976	31373976	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITLN1	55600	broad.mit.edu	37	1	160853358	160853358	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITLN1	55600	broad.mit.edu	37	1	160853358	160853358	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITLN2	142683	broad.mit.edu	37	1	160920527	160920527	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITLN2	142683	broad.mit.edu	37	1	160920527	160920527	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITLN2	142683	broad.mit.edu	37	1	160920803	160920803	+	Intron	SNP	T	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITM2B	9445	broad.mit.edu	37	13	48828025	48828025	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITM2B	9445	broad.mit.edu	37	13	48828025	48828025	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITPR2	3709	broad.mit.edu	37	12	26774132	26774132	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITPR2	3709	broad.mit.edu	37	12	26774132	26774132	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JAKMIP1	152789	broad.mit.edu	37	4	6083539	6083539	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JAKMIP1	152789	broad.mit.edu	37	4	6083539	6083539	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JAZF1	221895	broad.mit.edu	37	7	28031588	28031588	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JAZF1	221895	broad.mit.edu	37	7	28031588	28031588	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KALRN	8997	broad.mit.edu	37	3	124201673	124201673	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KALRN	8997	broad.mit.edu	37	3	124201673	124201673	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KANK4	163782	broad.mit.edu	37	1	62703976	62703976	+	Silent	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KANK4	163782	broad.mit.edu	37	1	62703976	62703976	+	Silent	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNB2	9312	broad.mit.edu	37	8	73479987	73479987	+	Silent	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNB2	9312	broad.mit.edu	37	8	73479987	73479987	+	Silent	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCND3	3752	broad.mit.edu	37	1	112329757	112329757	+	Intron	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCND3	3752	broad.mit.edu	37	1	112329757	112329757	+	Intron	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH1	3756	broad.mit.edu	37	1	211192665	211192665	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH1	3756	broad.mit.edu	37	1	211192665	211192665	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH4	23415	broad.mit.edu	37	17	40312479	40312479	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH4	23415	broad.mit.edu	37	17	40312479	40312479	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNK1	3775	broad.mit.edu	37	1	233807331	233807331	+	3'UTR	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNK1	3775	broad.mit.edu	37	1	233807331	233807331	+	3'UTR	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNN2	3781	broad.mit.edu	37	5	113698885	113698885	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNN2	3781	broad.mit.edu	37	5	113698885	113698885	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNS3	3790	broad.mit.edu	37	2	18113190	18113190	+	Silent	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM2A	22992	broad.mit.edu	37	11	67013643	67013643	+	Intron	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM2A	22992	broad.mit.edu	37	11	66999631	66999631	+	Intron	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM2A	22992	broad.mit.edu	37	11	67013643	67013643	+	Intron	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KHDRBS2	202559	broad.mit.edu	37	6	62757886	62757886	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KHDRBS2	202559	broad.mit.edu	37	6	62757886	62757886	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0240	23506	broad.mit.edu	37	6	42830320	42830320	+	Silent	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0240	23506	broad.mit.edu	37	6	42830320	42830320	+	Silent	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0586	9786	broad.mit.edu	37	14	58988698	58988698	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0586	9786	broad.mit.edu	37	14	58988698	58988698	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0664	23277	broad.mit.edu	37	17	2606843	2606843	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0664	23277	broad.mit.edu	37	17	2606843	2606843	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0892	23383	broad.mit.edu	37	19	19454666	19454666	+	Silent	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0892	23383	broad.mit.edu	37	19	19454666	19454666	+	Silent	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1109	84162	broad.mit.edu	37	4	123234842	123234842	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1109	84162	broad.mit.edu	37	4	123234842	123234842	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1210	57481	broad.mit.edu	37	X	118221462	118221462	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1210	57481	broad.mit.edu	37	X	118221462	118221462	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1211	57482	broad.mit.edu	37	4	57182101	57182101	+	Silent	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1211	57482	broad.mit.edu	37	4	57182101	57182101	+	Silent	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1267	284058	broad.mit.edu	37	17	44249069	44249069	+	Silent	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1267	284058	broad.mit.edu	37	17	44249069	44249069	+	Silent	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1409	57578	broad.mit.edu	37	14	94041456	94041456	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1409	57578	broad.mit.edu	37	14	94088614	94088614	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1409	57578	broad.mit.edu	37	14	94121824	94121824	+	Intron	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1409	57578	broad.mit.edu	37	14	94041456	94041456	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1409	57578	broad.mit.edu	37	14	94088614	94088614	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1409	57578	broad.mit.edu	37	14	94121824	94121824	+	Intron	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1429	25962	broad.mit.edu	37	8	95507124	95507124	+	Silent	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1429	25962	broad.mit.edu	37	8	95507124	95507124	+	Silent	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1549	57670	broad.mit.edu	37	7	138556069	138556069	+	Nonsense_Mutation	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1549	57670	broad.mit.edu	37	7	138556069	138556069	+	Nonsense_Mutation	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1751	85452	broad.mit.edu	37	1	1905589	1905589	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1751	85452	broad.mit.edu	37	1	1905589	1905589	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1755	85449	broad.mit.edu	37	20	36854000	36854000	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1755	85449	broad.mit.edu	37	20	36854000	36854000	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA2022	340533	broad.mit.edu	37	X	73960592	73960592	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA2022	340533	broad.mit.edu	37	X	73961412	73961412	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA2022	340533	broad.mit.edu	37	X	73960592	73960592	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA2022	340533	broad.mit.edu	37	X	73961412	73961412	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF16B	55614	broad.mit.edu	37	20	16486938	16486938	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF16B	55614	broad.mit.edu	37	20	16486938	16486938	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF5A	3798	broad.mit.edu	37	12	57963980	57963980	+	Intron	SNP	A	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF5A	3798	broad.mit.edu	37	12	57963980	57963980	+	Intron	SNP	A	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIFAP3	22920	broad.mit.edu	37	1	170015946	170015946	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIFAP3	22920	broad.mit.edu	37	1	170015946	170015946	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHDC2	23588	broad.mit.edu	37	14	50249171	50249171	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHDC2	23588	broad.mit.edu	37	14	50249171	50249171	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL12	59349	broad.mit.edu	37	1	202880884	202880884	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL12	59349	broad.mit.edu	37	1	202880884	202880884	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL26	55295	broad.mit.edu	37	19	18775281	18775281	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL26	55295	broad.mit.edu	37	19	18775281	18775281	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL3	26249	broad.mit.edu	37	5	136969567	136969567	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL3	26249	broad.mit.edu	37	5	136969567	136969567	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL6	89857	broad.mit.edu	37	3	183211915	183211915	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL6	89857	broad.mit.edu	37	3	183211915	183211915	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRAS	3845	broad.mit.edu	37	12	25398285	25398285	+	Missense_Mutation	SNP	C	A	A	rs121913530		TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRAS	3845	broad.mit.edu	37	12	25398285	25398285	+	Missense_Mutation	SNP	C	A	A	rs121913530		TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT34	3885	broad.mit.edu	37	17	39535671	39535671	+	Silent	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT34	3885	broad.mit.edu	37	17	39535671	39535671	+	Silent	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT3	3850	broad.mit.edu	37	12	53189644	53189644	+	Silent	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT3	3850	broad.mit.edu	37	12	53189644	53189644	+	Silent	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT4	3851	broad.mit.edu	37	12	53201958	53201958	+	Intron	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT4	3851	broad.mit.edu	37	12	53201958	53201958	+	Intron	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT84	3890	broad.mit.edu	37	12	52774887	52774887	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT84	3890	broad.mit.edu	37	12	52774887	52774887	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP19-7	337974	broad.mit.edu	37	21	31933457	31933457	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP19-7	337974	broad.mit.edu	37	21	31933508	31933508	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP19-7	337974	broad.mit.edu	37	21	31933457	31933457	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP19-7	337974	broad.mit.edu	37	21	31933508	31933508	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP5-4	387267	broad.mit.edu	37	11	1643150	1643150	+	Intron	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KY	339855	broad.mit.edu	37	3	134362143	134362143	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KY	339855	broad.mit.edu	37	3	134362143	134362143	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
L1CAM	3897	broad.mit.edu	37	X	153137516	153137516	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
L1CAM	3897	broad.mit.edu	37	X	153137516	153137516	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAG3	3902	broad.mit.edu	37	12	6884556	6884556	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAG3	3902	broad.mit.edu	37	12	6884556	6884556	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMB1	3912	broad.mit.edu	37	7	107569639	107569640	+	Frame_Shift_Ins	INS	-	TT	TT			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMB1	3912	broad.mit.edu	37	7	107569639	107569640	+	Frame_Shift_Ins	INS	-	TT	TT			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMB3	3914	broad.mit.edu	37	1	209790949	209790949	+	Intron	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMB3	3914	broad.mit.edu	37	1	209790949	209790949	+	Intron	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMB3	3914	broad.mit.edu	37	1	209799153	209799153	+	Frame_Shift_Del	DEL	T	-	-			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LANCL2	55915	broad.mit.edu	37	7	55496113	55496113	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LANCL2	55915	broad.mit.edu	37	7	55496113	55496113	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LARP1	23367	broad.mit.edu	37	5	154179119	154179119	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LARP1	23367	broad.mit.edu	37	5	154179119	154179119	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LASP1	3927	broad.mit.edu	37	17	37070638	37070638	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LASP1	3927	broad.mit.edu	37	17	37070638	37070638	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCE3B	353143	broad.mit.edu	37	1	152586476	152586476	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCE3B	353143	broad.mit.edu	37	1	152586476	152586476	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEKR1	389170	broad.mit.edu	37	3	156695347	156695347	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEKR1	389170	broad.mit.edu	37	3	156695347	156695347	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIFR	3977	broad.mit.edu	37	5	38506580	38506580	+	Intron	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIFR	3977	broad.mit.edu	37	5	38506580	38506580	+	Intron	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIG1	3978	broad.mit.edu	37	19	48665538	48665538	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIG1	3978	broad.mit.edu	37	19	48665538	48665538	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIG4	3981	broad.mit.edu	37	13	108862190	108862190	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIG4	3981	broad.mit.edu	37	13	108862190	108862190	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRA2	11027	broad.mit.edu	37	19	55086935	55086935	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRA2	11027	broad.mit.edu	37	19	55086935	55086935	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRA3	11026	broad.mit.edu	37	19	54804218	54804218	+	5'UTR	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRA3	11026	broad.mit.edu	37	19	54804218	54804218	+	5'UTR	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIN54	132660	broad.mit.edu	37	4	83891405	83891405	+	Intron	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIN54	132660	broad.mit.edu	37	4	83891405	83891405	+	Intron	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIPI	149998	broad.mit.edu	37	21	15561477	15561477	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIPI	149998	broad.mit.edu	37	21	15561477	15561477	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIPK	643414	broad.mit.edu	37	10	90488429	90488429	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIPK	643414	broad.mit.edu	37	10	90488429	90488429	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIX1L	128077	broad.mit.edu	37	1	145492316	145492316	+	Silent	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIX1L	128077	broad.mit.edu	37	1	145492316	145492316	+	Silent	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LLGL2	3993	broad.mit.edu	37	17	73569271	73569271	+	Silent	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LLGL2	3993	broad.mit.edu	37	17	73569271	73569271	+	Silent	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMAN1	3998	broad.mit.edu	37	18	57013159	57013159	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMAN1	3998	broad.mit.edu	37	18	57013159	57013159	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMBRD2	92255	broad.mit.edu	37	5	36142819	36142819	+	Intron	DEL	T	-	-	rs68098184		TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LNX2	222484	broad.mit.edu	37	13	28130363	28130363	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LNX2	222484	broad.mit.edu	37	13	28130363	28130363	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC202181	202181	broad.mit.edu	37	5	177054515	177054515	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC202181	202181	broad.mit.edu	37	5	177054515	177054515	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC284441	284441	broad.mit.edu	37	19	20370104	20370104	+	Silent	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC284441	284441	broad.mit.edu	37	19	20370104	20370104	+	Silent	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC646214	646214	broad.mit.edu	37	15	21936631	21936631	+	RNA	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC646214	646214	broad.mit.edu	37	15	21936631	21936631	+	RNA	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC647288	647288	broad.mit.edu	37	13	75814570	75814570	+	5'Flank	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC647288	647288	broad.mit.edu	37	13	75814570	75814570	+	5'Flank	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC651250	651250	broad.mit.edu	37	17	66126329	66126329	+	RNA	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC727924	727924	broad.mit.edu	37	15	22297866	22297866	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC727924	727924	broad.mit.edu	37	15	22297866	22297866	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC96610	96610	broad.mit.edu	37	22	22947358	22947358	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC96610	96610	broad.mit.edu	37	22	22947358	22947358	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPAR1	1902	broad.mit.edu	37	9	113704241	113704241	+	Frame_Shift_Del	DEL	A	-	-			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPAR1	1902	broad.mit.edu	37	9	113704241	113704241	+	Frame_Shift_Del	DEL	A	-	-			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPCAT1	79888	broad.mit.edu	37	5	1494959	1494959	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPCAT1	79888	broad.mit.edu	37	5	1494959	1494959	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPXN	9404	broad.mit.edu	37	11	58318700	58318700	+	Silent	SNP	T	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPXN	9404	broad.mit.edu	37	11	58318700	58318700	+	Silent	SNP	T	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRCH3	84859	broad.mit.edu	37	3	197547131	197547131	+	Intron	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRCH3	84859	broad.mit.edu	37	3	197547131	197547131	+	Intron	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141441414	141441414	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141441414	141441414	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC16A	55604	broad.mit.edu	37	6	25600607	25600607	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC16A	55604	broad.mit.edu	37	6	25600607	25600607	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC2	79442	broad.mit.edu	37	3	46592962	46592962	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC66	339977	broad.mit.edu	37	4	52861433	52861433	+	Silent	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC66	339977	broad.mit.edu	37	4	52861433	52861433	+	Silent	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRFIP1	9208	broad.mit.edu	37	2	238643909	238643909	+	Intron	SNP	A	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRFIP1	9208	broad.mit.edu	37	2	238643909	238643909	+	Intron	SNP	A	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LTBP1	4052	broad.mit.edu	37	2	33622289	33622289	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LTBP1	4052	broad.mit.edu	37	2	33622289	33622289	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LUZP2	338645	broad.mit.edu	37	11	24936089	24936089	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LUZP2	338645	broad.mit.edu	37	11	24936089	24936089	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYST	1130	broad.mit.edu	37	1	235887233	235887233	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYST	1130	broad.mit.edu	37	1	235887274	235887274	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYST	1130	broad.mit.edu	37	1	235887233	235887233	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYST	1130	broad.mit.edu	37	1	235887274	235887274	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAB21L2	10586	broad.mit.edu	37	4	151504238	151504238	+	Silent	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAB21L2	10586	broad.mit.edu	37	4	151504238	151504238	+	Silent	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MACF1	23499	broad.mit.edu	37	1	39783000	39783000	+	Silent	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MACF1	23499	broad.mit.edu	37	1	39917738	39917738	+	Intron	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MACF1	23499	broad.mit.edu	37	1	39783000	39783000	+	Silent	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MACF1	23499	broad.mit.edu	37	1	39917738	39917738	+	Intron	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAD2L1BP	9587	broad.mit.edu	37	6	43604174	43604174	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAD2L1BP	9587	broad.mit.edu	37	6	43604174	43604174	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEA11	4110	broad.mit.edu	37	X	148794993	148794993	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEA11	4110	broad.mit.edu	37	X	148794993	148794993	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEA12	4111	broad.mit.edu	37	X	151896287	151896287	+	RNA	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEA12	4111	broad.mit.edu	37	X	151896287	151896287	+	RNA	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEA5	4104	broad.mit.edu	37	X	151283261	151283261	+	3'UTR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEA5	4104	broad.mit.edu	37	X	151283261	151283261	+	3'UTR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEB18	286514	broad.mit.edu	37	X	26157547	26157547	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEB18	286514	broad.mit.edu	37	X	26157547	26157547	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEF1	64110	broad.mit.edu	37	3	184428505	184428505	+	3'UTR	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEF1	64110	broad.mit.edu	37	3	184428505	184428505	+	3'UTR	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAK	4117	broad.mit.edu	37	6	10796256	10796256	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAML1	9794	broad.mit.edu	37	5	179192504	179192504	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAML1	9794	broad.mit.edu	37	5	179192504	179192504	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP1A	4130	broad.mit.edu	37	15	43820365	43820365	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP1A	4130	broad.mit.edu	37	15	43820365	43820365	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP2	4133	broad.mit.edu	37	2	210560774	210560774	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP2	4133	broad.mit.edu	37	2	210560774	210560774	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K14	9020	broad.mit.edu	37	17	43343870	43343870	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K14	9020	broad.mit.edu	37	17	43343870	43343870	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K1	4214	broad.mit.edu	37	5	56160759	56160759	+	Nonsense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K1	4214	broad.mit.edu	37	5	56160759	56160759	+	Nonsense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K9	4293	broad.mit.edu	37	14	71197272	71197272	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K9	4293	broad.mit.edu	37	14	71197272	71197272	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP6	4135	broad.mit.edu	37	11	75298416	75298416	+	Silent	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP6	4135	broad.mit.edu	37	11	75298416	75298416	+	Silent	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP9	79884	broad.mit.edu	37	4	156273864	156273864	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP9	79884	broad.mit.edu	37	4	156281611	156281611	+	Intron	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP9	79884	broad.mit.edu	37	4	156273864	156273864	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP9	79884	broad.mit.edu	37	4	156281611	156281611	+	Intron	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPK14	1432	broad.mit.edu	37	6	36075268	36075268	+	Nonsense_Mutation	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPK14	1432	broad.mit.edu	37	6	36075268	36075268	+	Nonsense_Mutation	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARK1	4139	broad.mit.edu	37	1	220777583	220777583	+	Intron	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARK1	4139	broad.mit.edu	37	1	220777583	220777583	+	Intron	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCAM	4162	broad.mit.edu	37	11	119183624	119183624	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCAM	4162	broad.mit.edu	37	11	119183624	119183624	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCM3AP	8888	broad.mit.edu	37	21	47690550	47690550	+	Intron	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCM3AP	8888	broad.mit.edu	37	21	47690550	47690550	+	Intron	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCM3	4172	broad.mit.edu	37	6	52149468	52149468	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCM3	4172	broad.mit.edu	37	6	52149468	52149468	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDN1	23195	broad.mit.edu	37	6	90494670	90494670	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDN1	23195	broad.mit.edu	37	6	90494670	90494670	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDP1	145553	broad.mit.edu	37	14	24684845	24684845	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDP1	145553	broad.mit.edu	37	14	24684845	24684845	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED12L	116931	broad.mit.edu	37	3	150932193	150932193	+	Intron	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED12L	116931	broad.mit.edu	37	3	150932193	150932193	+	Intron	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED12	9968	broad.mit.edu	37	X	70356805	70356805	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED12	9968	broad.mit.edu	37	X	70356805	70356805	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEFV	4210	broad.mit.edu	37	16	3294343	3294343	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEFV	4210	broad.mit.edu	37	16	3299059	3299059	+	Intron	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEFV	4210	broad.mit.edu	37	16	3294343	3294343	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEFV	4210	broad.mit.edu	37	16	3299059	3299059	+	Intron	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEPE	56955	broad.mit.edu	37	4	88767710	88767710	+	3'UTR	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MERTK	10461	broad.mit.edu	37	2	112786085	112786085	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MERTK	10461	broad.mit.edu	37	2	112786085	112786085	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
METTL14	57721	broad.mit.edu	37	4	119631390	119631390	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
METTL14	57721	broad.mit.edu	37	4	119631390	119631390	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAM	8972	broad.mit.edu	37	7	141754727	141754727	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAM	8972	broad.mit.edu	37	7	141754727	141754727	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGA	23269	broad.mit.edu	37	15	42019659	42019660	+	Intron	DNP	GG	TT	TT			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGA	23269	broad.mit.edu	37	15	42019659	42019660	+	Intron	DNP	GG	TT	TT			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIOS	54468	broad.mit.edu	37	7	7636007	7636007	+	Silent	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIOS	54468	broad.mit.edu	37	7	7636007	7636007	+	Silent	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR1269	100302177	broad.mit.edu	37	4	67142351	67142351	+	5'Flank	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR1269	100302177	broad.mit.edu	37	4	67142351	67142351	+	5'Flank	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR329-2	574409	broad.mit.edu	37	14	101493518	101493518	+	RNA	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR329-2	574409	broad.mit.edu	37	14	101493518	101493518	+	RNA	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR519D	574480	broad.mit.edu	37	19	54216609	54216609	+	RNA	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR519D	574480	broad.mit.edu	37	19	54216609	54216609	+	RNA	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR542	664617	broad.mit.edu	37	X	133675450	133675450	+	RNA	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR542	664617	broad.mit.edu	37	X	133675450	133675450	+	RNA	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MKNK1	8569	broad.mit.edu	37	1	47040510	47040510	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MKNK1	8569	broad.mit.edu	37	1	47040510	47040510	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL2	8085	broad.mit.edu	37	12	49438782	49438782	+	Intron	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL2	8085	broad.mit.edu	37	12	49438782	49438782	+	Intron	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL3	58508	broad.mit.edu	37	7	151845608	151845608	+	Silent	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL3	58508	broad.mit.edu	37	7	151876995	151876995	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL3	58508	broad.mit.edu	37	7	151876995	151876995	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLPH	79083	broad.mit.edu	37	2	238419681	238419681	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLPH	79083	broad.mit.edu	37	2	238419681	238419681	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP12	4321	broad.mit.edu	37	11	102742618	102742618	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP12	4321	broad.mit.edu	37	11	102742618	102742618	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP13	4322	broad.mit.edu	37	11	102824901	102824901	+	Nonsense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP13	4322	broad.mit.edu	37	11	102824901	102824901	+	Nonsense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOCOS	55034	broad.mit.edu	37	18	33800118	33800118	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOCOS	55034	broad.mit.edu	37	18	33800118	33800118	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOSC2	54996	broad.mit.edu	37	1	220928190	220928190	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOSC2	54996	broad.mit.edu	37	1	220928190	220928190	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPZ	4359	broad.mit.edu	37	1	161275780	161275780	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPS36	92259	broad.mit.edu	37	5	68524875	68524875	+	Intron	DEL	G	-	-			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MS4A5	64232	broad.mit.edu	37	11	60201330	60201330	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MS4A5	64232	broad.mit.edu	37	11	60201330	60201330	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSRB3	253827	broad.mit.edu	37	12	65702399	65702399	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSRB3	253827	broad.mit.edu	37	12	65702399	65702399	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR11	10903	broad.mit.edu	37	1	149908142	149908142	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR11	10903	broad.mit.edu	37	1	149908142	149908142	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC15	143662	broad.mit.edu	37	11	26582728	26582728	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC15	143662	broad.mit.edu	37	11	26582728	26582728	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9073651	9073651	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9083145	9083145	+	Silent	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	8994389	8994389	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9073651	9073651	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9083145	9083145	+	Silent	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC6	4588	broad.mit.edu	37	11	1018049	1018049	+	Silent	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MX1	4599	broad.mit.edu	37	21	42813965	42813965	+	Intron	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MX1	4599	broad.mit.edu	37	21	42813965	42813965	+	Intron	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH13	8735	broad.mit.edu	37	17	10227215	10227215	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH2	4620	broad.mit.edu	37	17	10448670	10448670	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH2	4620	broad.mit.edu	37	17	10448670	10448670	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH7	4625	broad.mit.edu	37	14	23886040	23886040	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH7	4625	broad.mit.edu	37	14	23893993	23893993	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH7	4625	broad.mit.edu	37	14	23886040	23886040	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH7	4625	broad.mit.edu	37	14	23893993	23893993	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYLK4	340156	broad.mit.edu	37	6	2685515	2685515	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYLK4	340156	broad.mit.edu	37	6	2685515	2685515	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO18A	399687	broad.mit.edu	37	17	27445428	27445428	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO18A	399687	broad.mit.edu	37	17	27445428	27445428	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO1H	283446	broad.mit.edu	37	12	109843787	109843787	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOM2	9172	broad.mit.edu	37	8	2040076	2040076	+	Intron	SNP	T	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOM2	9172	broad.mit.edu	37	8	2040076	2040076	+	Intron	SNP	T	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NALCN	259232	broad.mit.edu	37	13	102029296	102029296	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NALCN	259232	broad.mit.edu	37	13	102029296	102029296	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCAM2	4685	broad.mit.edu	37	21	22652835	22652835	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCAM2	4685	broad.mit.edu	37	21	22652835	22652835	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCAN	1463	broad.mit.edu	37	19	19338336	19338336	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCAN	1463	broad.mit.edu	37	19	19338336	19338336	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCAPG	64151	broad.mit.edu	37	4	17827081	17827081	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCAPG	64151	broad.mit.edu	37	4	17827081	17827081	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCKIPSD	51517	broad.mit.edu	37	3	48718899	48718899	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCKIPSD	51517	broad.mit.edu	37	3	48718899	48718899	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDST1	3340	broad.mit.edu	37	5	149932858	149932858	+	Silent	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDST1	3340	broad.mit.edu	37	5	149932858	149932858	+	Silent	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEBL	10529	broad.mit.edu	37	10	21129659	21129659	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEBL	10529	broad.mit.edu	37	10	21129659	21129659	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEGR1	257194	broad.mit.edu	37	1	72058514	72058514	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEGR1	257194	broad.mit.edu	37	1	72241785	72241785	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEGR1	257194	broad.mit.edu	37	1	72058514	72058514	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEGR1	257194	broad.mit.edu	37	1	72241785	72241785	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEK10	152110	broad.mit.edu	37	3	27332233	27332233	+	Missense_Mutation	SNP	T	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEK10	152110	broad.mit.edu	37	3	27332233	27332233	+	Missense_Mutation	SNP	T	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEK8	284086	broad.mit.edu	37	17	27061971	27061971	+	Silent	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFAT5	10725	broad.mit.edu	37	16	69725991	69725991	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NINL	22981	broad.mit.edu	37	20	25470475	25470475	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NINL	22981	broad.mit.edu	37	20	25470475	25470475	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NIPA1	123606	broad.mit.edu	37	15	23060865	23060865	+	Silent	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NIPA1	123606	broad.mit.edu	37	15	23060865	23060865	+	Silent	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NKX6-2	84504	broad.mit.edu	37	10	134598451	134598451	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NKX6-2	84504	broad.mit.edu	37	10	134598451	134598451	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLGN4X	57502	broad.mit.edu	37	X	5821268	5821269	+	Frame_Shift_Ins	INS	-	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLGN4X	57502	broad.mit.edu	37	X	5821268	5821269	+	Frame_Shift_Ins	INS	-	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP3	114548	broad.mit.edu	37	1	247593144	247593144	+	Intron	SNP	C	T	T	rs146623139	by1000genomes	TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP3	114548	broad.mit.edu	37	1	247593144	247593144	+	Intron	SNP	C	T	T	rs146623139	by1000genomes	TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP7	199713	broad.mit.edu	37	19	55447692	55447692	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP7	199713	broad.mit.edu	37	19	55447692	55447692	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP8	126205	broad.mit.edu	37	19	56477761	56477761	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP8	126205	broad.mit.edu	37	19	56477761	56477761	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NME7	29922	broad.mit.edu	37	1	169256500	169256500	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NME7	29922	broad.mit.edu	37	1	169256500	169256500	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOS1	4842	broad.mit.edu	37	12	117701880	117701880	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOS1	4842	broad.mit.edu	37	12	117701880	117701880	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOS2	4843	broad.mit.edu	37	17	26084400	26084400	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOS2	4843	broad.mit.edu	37	17	26094781	26094781	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOS2	4843	broad.mit.edu	37	17	26116034	26116034	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOS2	4843	broad.mit.edu	37	17	26084400	26084400	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOS2	4843	broad.mit.edu	37	17	26094781	26094781	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOS2	4843	broad.mit.edu	37	17	26116034	26116034	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOTCH2	4853	broad.mit.edu	37	1	120510124	120510124	+	Nonsense_Mutation	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOTCH2	4853	broad.mit.edu	37	1	120510124	120510124	+	Nonsense_Mutation	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOX1	27035	broad.mit.edu	37	X	100106267	100106267	+	Silent	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOX1	27035	broad.mit.edu	37	X	100106267	100106267	+	Silent	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPLOC4	55666	broad.mit.edu	37	17	79535908	79535908	+	Intron	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR2C2	7182	broad.mit.edu	37	3	15045460	15045460	+	Silent	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR2C2	7182	broad.mit.edu	37	3	15045460	15045460	+	Silent	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN2	9379	broad.mit.edu	37	11	64428202	64428202	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN2	9379	broad.mit.edu	37	11	64428202	64428202	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN3	9369	broad.mit.edu	37	14	79454565	79454565	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN3	9369	broad.mit.edu	37	14	79454565	79454565	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSUN2	54888	broad.mit.edu	37	5	6620481	6620481	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSUN2	54888	broad.mit.edu	37	5	6620481	6620481	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUAK1	9891	broad.mit.edu	37	12	106461516	106461516	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUAK1	9891	broad.mit.edu	37	12	106461516	106461516	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP107	57122	broad.mit.edu	37	12	69084516	69084516	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP107	57122	broad.mit.edu	37	12	69084516	69084516	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP133	55746	broad.mit.edu	37	1	229593883	229593883	+	Intron	SNP	A	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP133	55746	broad.mit.edu	37	1	229593883	229593883	+	Intron	SNP	A	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP210	23225	broad.mit.edu	37	3	13363377	13363377	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP210	23225	broad.mit.edu	37	3	13363377	13363377	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP214	8021	broad.mit.edu	37	9	134008552	134008552	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP214	8021	broad.mit.edu	37	9	134008552	134008552	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF1	10482	broad.mit.edu	37	11	62572866	62572866	+	5'UTR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF1	10482	broad.mit.edu	37	11	62572866	62572866	+	5'UTR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF5	55998	broad.mit.edu	37	X	101092985	101092985	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF5	55998	broad.mit.edu	37	X	101092985	101092985	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXPH4	11247	broad.mit.edu	37	12	57619578	57619578	+	3'UTR	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODAM	54959	broad.mit.edu	37	4	71062448	71062448	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODAM	54959	broad.mit.edu	37	4	71062448	71062448	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ2	57451	broad.mit.edu	37	5	167645439	167645439	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ2	57451	broad.mit.edu	37	5	167645439	167645439	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OLFML2B	25903	broad.mit.edu	37	1	161953507	161953507	+	Silent	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPALIN	93377	broad.mit.edu	37	10	98113280	98113280	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPALIN	93377	broad.mit.edu	37	10	98113280	98113280	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10A6	390093	broad.mit.edu	37	11	7949730	7949730	+	Silent	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10A6	390093	broad.mit.edu	37	11	7949730	7949730	+	Silent	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR12D2	26529	broad.mit.edu	37	6	29365221	29365221	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2D3	120775	broad.mit.edu	37	11	6942680	6942680	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2D3	120775	broad.mit.edu	37	11	6942680	6942680	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2G6	391211	broad.mit.edu	37	1	248685555	248685555	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2G6	391211	broad.mit.edu	37	1	248685555	248685555	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L13	284521	broad.mit.edu	37	1	248112030	248112030	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L13	284521	broad.mit.edu	37	1	248112030	248112030	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2M1P	388762	broad.mit.edu	37	1	248285818	248285818	+	Missense_Mutation	SNP	T	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2M1P	388762	broad.mit.edu	37	1	248285818	248285818	+	Missense_Mutation	SNP	T	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2M3	127062	broad.mit.edu	37	1	248366686	248366686	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T4	127074	broad.mit.edu	37	1	248524995	248524995	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T4	127074	broad.mit.edu	37	1	248524995	248524995	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4C6	219432	broad.mit.edu	37	11	55432933	55432933	+	Silent	SNP	C	A	A	rs77687368	byFrequency;by1000genomes	TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4C6	219432	broad.mit.edu	37	11	55432933	55432933	+	Silent	SNP	C	A	A	rs77687368	byFrequency;by1000genomes	TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4L1	122742	broad.mit.edu	37	14	20528948	20528948	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4N4	283694	broad.mit.edu	37	15	22383458	22383458	+	3'UTR	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4N4	283694	broad.mit.edu	37	15	22383458	22383458	+	3'UTR	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52B4	143496	broad.mit.edu	37	11	4389086	4389087	+	Frame_Shift_Ins	INS	-	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52B4	143496	broad.mit.edu	37	11	4389086	4389087	+	Frame_Shift_Ins	INS	-	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5I1	10798	broad.mit.edu	37	11	55703541	55703541	+	Silent	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5I1	10798	broad.mit.edu	37	11	55703541	55703541	+	Silent	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5L1	219437	broad.mit.edu	37	11	55579770	55579770	+	Silent	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5L1	219437	broad.mit.edu	37	11	55579770	55579770	+	Silent	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6F1	343169	broad.mit.edu	37	1	247875386	247875386	+	Silent	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8S1	341568	broad.mit.edu	37	12	48920324	48920324	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8S1	341568	broad.mit.edu	37	12	48920324	48920324	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTOA	146183	broad.mit.edu	37	16	21737815	21737815	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTOA	146183	broad.mit.edu	37	16	21737815	21737815	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OVCH1	341350	broad.mit.edu	37	12	29597298	29597298	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OVCH1	341350	broad.mit.edu	37	12	29597298	29597298	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OXSM	54995	broad.mit.edu	37	3	25833258	25833258	+	Silent	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OXSM	54995	broad.mit.edu	37	3	25833258	25833258	+	Silent	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P4HA1	5033	broad.mit.edu	37	10	74803549	74803549	+	Intron	DEL	A	-	-			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P4HA1	5033	broad.mit.edu	37	10	74803549	74803549	+	Intron	DEL	A	-	-			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PADI6	353238	broad.mit.edu	37	1	17699492	17699492	+	Intron	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAGE1	8712	broad.mit.edu	37	X	49453917	49453917	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAGE1	8712	broad.mit.edu	37	X	49453917	49453917	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAK3	5063	broad.mit.edu	37	X	110459767	110459767	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAK3	5063	broad.mit.edu	37	X	110459767	110459767	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PALLD	23022	broad.mit.edu	37	4	169845414	169845414	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PALLD	23022	broad.mit.edu	37	4	169845414	169845414	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAMR1	25891	broad.mit.edu	37	11	35456100	35456100	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAMR1	25891	broad.mit.edu	37	11	35456100	35456100	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARD3	56288	broad.mit.edu	37	10	34690786	34690786	+	Silent	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARD3	56288	broad.mit.edu	37	10	34690786	34690786	+	Silent	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PASD1	139135	broad.mit.edu	37	X	150769948	150769948	+	Intron	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PASD1	139135	broad.mit.edu	37	X	150769948	150769948	+	Intron	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCBP3	54039	broad.mit.edu	37	21	47361589	47361589	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCBP3	54039	broad.mit.edu	37	21	47361589	47361589	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH11X	27328	broad.mit.edu	37	X	91369118	91369118	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH11X	27328	broad.mit.edu	37	X	91369118	91369118	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA1	56147	broad.mit.edu	37	5	140167047	140167048	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA1	56147	broad.mit.edu	37	5	140167047	140167048	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHAC1	56135	broad.mit.edu	37	5	140306690	140306690	+	Silent	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHAC1	56135	broad.mit.edu	37	5	140306690	140306690	+	Silent	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB7	56129	broad.mit.edu	37	5	140554442	140554442	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB7	56129	broad.mit.edu	37	5	140554442	140554442	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA11	56105	broad.mit.edu	37	5	140801457	140801457	+	Silent	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA11	56105	broad.mit.edu	37	5	140801457	140801457	+	Silent	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGC4	56098	broad.mit.edu	37	5	140866246	140866246	+	Silent	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGC4	56098	broad.mit.edu	37	5	140866246	140866246	+	Silent	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCOLCE2	26577	broad.mit.edu	37	3	142542291	142542291	+	Intron	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCOLCE2	26577	broad.mit.edu	37	3	142542291	142542291	+	Intron	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE1C	5137	broad.mit.edu	37	7	31918501	31918501	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE1C	5137	broad.mit.edu	37	7	31918501	31918501	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144857704	144857704	+	Missense_Mutation	SNP	C	A	A	rs144397176		TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE6A	5145	broad.mit.edu	37	5	149301324	149301324	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE6A	5145	broad.mit.edu	37	5	149301324	149301324	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDHA1	5160	broad.mit.edu	37	X	19375862	19375862	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDHA1	5160	broad.mit.edu	37	X	19375862	19375862	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDLIM5	10611	broad.mit.edu	37	4	95578763	95578763	+	Intron	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDLIM5	10611	broad.mit.edu	37	4	95578763	95578763	+	Intron	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEAR1	375033	broad.mit.edu	37	1	156877446	156877446	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PELI2	57161	broad.mit.edu	37	14	56757264	56757264	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PELI2	57161	broad.mit.edu	37	14	56757264	56757264	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PFKFB3	5209	broad.mit.edu	37	10	6258251	6258251	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PFKFB3	5209	broad.mit.edu	37	10	6258251	6258251	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHKG2	5261	broad.mit.edu	37	16	30762447	30762447	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHKG2	5261	broad.mit.edu	37	16	30762447	30762447	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PI4KA	5297	broad.mit.edu	37	22	21096392	21096392	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PI4KA	5297	broad.mit.edu	37	22	21096392	21096392	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3AP1	118788	broad.mit.edu	37	10	98411383	98411383	+	Silent	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3AP1	118788	broad.mit.edu	37	10	98411383	98411383	+	Silent	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3C2A	5286	broad.mit.edu	37	11	17153472	17153472	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3C2G	5288	broad.mit.edu	37	12	18691060	18691060	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3C2G	5288	broad.mit.edu	37	12	18691060	18691060	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PION	54103	broad.mit.edu	37	7	76984630	76984630	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PION	54103	broad.mit.edu	37	7	76984630	76984630	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIPSL	266971	broad.mit.edu	37	10	95720197	95720197	+	Silent	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIPSL	266971	broad.mit.edu	37	10	95720197	95720197	+	Silent	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PITPNB	23760	broad.mit.edu	37	22	28315195	28315195	+	5'UTR	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PITPNB	23760	broad.mit.edu	37	22	28315195	28315195	+	5'UTR	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PITPNC1	26207	broad.mit.edu	37	17	65688837	65688837	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PITPNC1	26207	broad.mit.edu	37	17	65688837	65688837	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIWIL2	55124	broad.mit.edu	37	8	22161574	22161574	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIWIL2	55124	broad.mit.edu	37	8	22161574	22161574	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD1L1	168507	broad.mit.edu	37	7	47970755	47970755	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD1L1	168507	broad.mit.edu	37	7	47970755	47970755	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1L1	93035	broad.mit.edu	37	8	110498869	110498869	+	Intron	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1L1	93035	broad.mit.edu	37	8	110520333	110520333	+	Missense_Mutation	SNP	T	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1L1	93035	broad.mit.edu	37	8	110498869	110498869	+	Intron	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1L1	93035	broad.mit.edu	37	8	110520333	110520333	+	Missense_Mutation	SNP	T	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1	5314	broad.mit.edu	37	6	51890383	51890383	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1	5314	broad.mit.edu	37	6	51900510	51900510	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1	5314	broad.mit.edu	37	6	51890383	51890383	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1	5314	broad.mit.edu	37	6	51900510	51900510	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKLR	5313	broad.mit.edu	37	1	155263058	155263058	+	Missense_Mutation	SNP	C	A	A	rs149932430		TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKLR	5313	broad.mit.edu	37	1	155263058	155263058	+	Missense_Mutation	SNP	C	A	A	rs149932430		TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKP4	8502	broad.mit.edu	37	2	159488326	159488326	+	Silent	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKP4	8502	broad.mit.edu	37	2	159488326	159488326	+	Silent	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCB1	23236	broad.mit.edu	37	20	8720984	8720984	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCB3	5331	broad.mit.edu	37	11	64033751	64033751	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCB3	5331	broad.mit.edu	37	11	64033751	64033751	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCL1	5334	broad.mit.edu	37	2	198949502	198949502	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCL1	5334	broad.mit.edu	37	2	198949502	198949502	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCXD3	345557	broad.mit.edu	37	5	41382556	41382556	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCXD3	345557	broad.mit.edu	37	5	41382556	41382556	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHA6	22874	broad.mit.edu	37	1	204217933	204217933	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHA6	22874	broad.mit.edu	37	1	204217933	204217933	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHG4B	153478	broad.mit.edu	37	5	143043	143043	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHG4B	153478	broad.mit.edu	37	5	143043	143043	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLP2	5355	broad.mit.edu	37	X	49030876	49030876	+	Intron	SNP	C	A	A	rs149928919	by1000genomes	TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLP2	5355	broad.mit.edu	37	X	49030876	49030876	+	Intron	SNP	C	A	A	rs149928919	by1000genomes	TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLS1	5357	broad.mit.edu	37	3	142402828	142402828	+	Intron	DEL	T	-	-			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA3	55558	broad.mit.edu	37	X	153699904	153699904	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA3	55558	broad.mit.edu	37	X	153699904	153699904	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA4	91584	broad.mit.edu	37	7	131859697	131859697	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA4	91584	broad.mit.edu	37	7	131859697	131859697	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNB3	5365	broad.mit.edu	37	X	153039543	153039543	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNB3	5365	broad.mit.edu	37	X	153039543	153039543	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PMVK	10654	broad.mit.edu	37	1	154897565	154897565	+	3'UTR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PMVK	10654	broad.mit.edu	37	1	154897565	154897565	+	3'UTR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNCK	139728	broad.mit.edu	37	X	152938238	152938239	+	Intron	DNP	CC	AA	AA			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNCK	139728	broad.mit.edu	37	X	152938238	152938239	+	Intron	DNP	CC	AA	AA			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNKD	25953	broad.mit.edu	37	2	219206749	219206749	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNKD	25953	broad.mit.edu	37	2	219206749	219206749	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POF1B	79983	broad.mit.edu	37	X	84559397	84559397	+	Silent	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POF1B	79983	broad.mit.edu	37	X	84559397	84559397	+	Silent	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLE	5426	broad.mit.edu	37	12	133209096	133209096	+	Splice_Site	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLE	5426	broad.mit.edu	37	12	133209096	133209096	+	Splice_Site	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR1A	25885	broad.mit.edu	37	2	86255230	86255230	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR1A	25885	broad.mit.edu	37	2	86255230	86255230	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR1B	84172	broad.mit.edu	37	2	113322139	113322139	+	Intron	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR1B	84172	broad.mit.edu	37	2	113322139	113322139	+	Intron	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR2H	5437	broad.mit.edu	37	3	184084505	184084505	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR2H	5437	broad.mit.edu	37	3	184084505	184084505	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POMC	5443	broad.mit.edu	37	2	25384028	25384028	+	Silent	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POMC	5443	broad.mit.edu	37	2	25384028	25384028	+	Silent	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POTEE	445582	broad.mit.edu	37	2	131975931	131975931	+	5'UTR	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POTEE	445582	broad.mit.edu	37	2	131975931	131975931	+	5'UTR	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POU5F1	5460	broad.mit.edu	37	6	31133041	31133041	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POU5F1	5460	broad.mit.edu	37	6	31133066	31133066	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POU5F1	5460	broad.mit.edu	37	6	31133041	31133041	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POU5F1	5460	broad.mit.edu	37	6	31133066	31133066	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPEF1	5475	broad.mit.edu	37	X	18802079	18802079	+	Silent	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPEF1	5475	broad.mit.edu	37	X	18802079	18802079	+	Silent	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPM1E	22843	broad.mit.edu	37	17	56976845	56976845	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPM1E	22843	broad.mit.edu	37	17	56976845	56976845	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R7	5510	broad.mit.edu	37	2	242109378	242109378	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R7	5510	broad.mit.edu	37	2	242109378	242109378	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R5D	5528	broad.mit.edu	37	6	42957397	42957397	+	Nonsense_Mutation	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP4R4	57718	broad.mit.edu	37	14	94708736	94708736	+	Silent	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP4R4	57718	broad.mit.edu	37	14	94708736	94708736	+	Silent	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRAMEF11	440560	broad.mit.edu	37	1	12884706	12884706	+	3'UTR	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRAMEF11	440560	broad.mit.edu	37	1	12884706	12884706	+	3'UTR	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRAMEF2	65122	broad.mit.edu	37	1	12918992	12918992	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRAMEF2	65122	broad.mit.edu	37	1	12918992	12918992	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRAP1	118471	broad.mit.edu	37	10	135165834	135165834	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRAP1	118471	broad.mit.edu	37	10	135165834	135165834	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRB2	653247	broad.mit.edu	37	12	11545943	11545943	+	Silent	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM9	56979	broad.mit.edu	37	5	23521304	23521304	+	Intron	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKCG	5582	broad.mit.edu	37	19	54401214	54401214	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKCSH	5589	broad.mit.edu	37	19	11552357	11552357	+	Intron	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKD1	5587	broad.mit.edu	37	14	30066936	30066936	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKD1	5587	broad.mit.edu	37	14	30066936	30066936	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKDC	5591	broad.mit.edu	37	8	48710725	48710725	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKDC	5591	broad.mit.edu	37	8	48710725	48710725	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRLHR	2834	broad.mit.edu	37	10	120353949	120353949	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRLHR	2834	broad.mit.edu	37	10	120353949	120353949	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRPS2	5634	broad.mit.edu	37	X	12837810	12837810	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRPS2	5634	broad.mit.edu	37	X	12837810	12837810	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRUNE2	158471	broad.mit.edu	37	9	79318919	79318919	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRUNE2	158471	broad.mit.edu	37	9	79318919	79318919	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSEN1	5663	broad.mit.edu	37	14	73653716	73653716	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSEN1	5663	broad.mit.edu	37	14	73653716	73653716	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSEN2	5664	broad.mit.edu	37	1	227068353	227068353	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSEN2	5664	broad.mit.edu	37	1	227068353	227068353	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG6	5675	broad.mit.edu	37	19	43519186	43519186	+	Intron	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG6	5675	broad.mit.edu	37	19	43519186	43519186	+	Intron	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG6	5675	broad.mit.edu	37	19	43520062	43520062	+	Intron	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMD3	5709	broad.mit.edu	37	17	38153669	38153669	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMF1	9491	broad.mit.edu	37	20	1145042	1145042	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMF1	9491	broad.mit.edu	37	20	1145042	1145042	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSPC1	55269	broad.mit.edu	37	13	20356404	20356404	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSPC1	55269	broad.mit.edu	37	13	20356404	20356404	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTF1A	256297	broad.mit.edu	37	10	23482676	23482676	+	Silent	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTGER4	5734	broad.mit.edu	37	5	40692076	40692076	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTGER4	5734	broad.mit.edu	37	5	40692076	40692076	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN13	5783	broad.mit.edu	37	4	87683877	87683877	+	Intron	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN13	5783	broad.mit.edu	37	4	87683877	87683877	+	Intron	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN5	84867	broad.mit.edu	37	11	18754992	18754992	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN5	84867	broad.mit.edu	37	11	18754992	18754992	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	8483987	8483987	+	Intron	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	8483987	8483987	+	Intron	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRH	5794	broad.mit.edu	37	19	55709993	55709993	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRH	5794	broad.mit.edu	37	19	55709993	55709993	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRM	5797	broad.mit.edu	37	18	8085888	8085888	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRM	5797	broad.mit.edu	37	18	8085888	8085888	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTS	5805	broad.mit.edu	37	11	112138328	112138328	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTS	5805	broad.mit.edu	37	11	112138328	112138328	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PXDNL	137902	broad.mit.edu	37	8	52336295	52336295	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PXDNL	137902	broad.mit.edu	37	8	52336295	52336295	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PXDN	7837	broad.mit.edu	37	2	1652789	1652789	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PXDN	7837	broad.mit.edu	37	2	1653262	1653262	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PXDN	7837	broad.mit.edu	37	2	1652789	1652789	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PXDN	7837	broad.mit.edu	37	2	1653262	1653262	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PZP	5858	broad.mit.edu	37	12	9316942	9316942	+	Intron	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PZP	5858	broad.mit.edu	37	12	9316942	9316942	+	Intron	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB13	5872	broad.mit.edu	37	1	153954987	153954987	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB13	5872	broad.mit.edu	37	1	153954987	153954987	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB39B	116442	broad.mit.edu	37	X	154490325	154490325	+	Silent	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB39B	116442	broad.mit.edu	37	X	154490325	154490325	+	Silent	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB39	54734	broad.mit.edu	37	11	107832852	107832852	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB39	54734	broad.mit.edu	37	11	107832852	107832852	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RABEP2	79874	broad.mit.edu	37	16	28926016	28926016	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RABEP2	79874	broad.mit.edu	37	16	28926016	28926016	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RABEPK	10244	broad.mit.edu	37	9	127990243	127990243	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RABEPK	10244	broad.mit.edu	37	9	127990243	127990243	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RABGAP1	23637	broad.mit.edu	37	9	125832755	125832755	+	Intron	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RABGAP1	23637	broad.mit.edu	37	9	125832755	125832755	+	Intron	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAD51C	5889	broad.mit.edu	37	17	56780677	56780677	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAD51C	5889	broad.mit.edu	37	17	56780677	56780677	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAG1	5896	broad.mit.edu	37	11	36596398	36596398	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAG1	5896	broad.mit.edu	37	11	36596398	36596398	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAI1	10743	broad.mit.edu	37	17	17707009	17707009	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAI1	10743	broad.mit.edu	37	17	17707009	17707009	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RANBP17	64901	broad.mit.edu	37	5	170305126	170305126	+	Missense_Mutation	SNP	G	T	T	rs147041695		TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RANBP17	64901	broad.mit.edu	37	5	170305126	170305126	+	Missense_Mutation	SNP	G	T	T	rs147041695		TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RANBP2	5903	broad.mit.edu	37	2	109374925	109374925	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RANBP2	5903	broad.mit.edu	37	2	109374925	109374925	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RB1CC1	9821	broad.mit.edu	37	8	53580640	53580640	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RB1CC1	9821	broad.mit.edu	37	8	53580640	53580640	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM19	9904	broad.mit.edu	37	12	114374889	114374889	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM19	9904	broad.mit.edu	37	12	114374889	114374889	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM24	221662	broad.mit.edu	37	6	17282877	17282877	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM24	221662	broad.mit.edu	37	6	17282877	17282877	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM6	10180	broad.mit.edu	37	3	50005024	50005024	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM6	10180	broad.mit.edu	37	3	50005024	50005024	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBP3	5949	broad.mit.edu	37	10	48389623	48389623	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBP3	5949	broad.mit.edu	37	10	48389623	48389623	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RECK	8434	broad.mit.edu	37	9	36059964	36059964	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RECK	8434	broad.mit.edu	37	9	36059964	36059964	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REG1A	5967	broad.mit.edu	37	2	79349171	79349171	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REG1A	5967	broad.mit.edu	37	2	79349171	79349171	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REG3A	5068	broad.mit.edu	37	2	79384695	79384695	+	Intron	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REG3A	5068	broad.mit.edu	37	2	79384695	79384695	+	Intron	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RELN	5649	broad.mit.edu	37	7	103270652	103270652	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RELN	5649	broad.mit.edu	37	7	103270652	103270652	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGL3	57139	broad.mit.edu	37	19	11526554	11526554	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGL3	57139	broad.mit.edu	37	19	11526554	11526554	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS3	5998	broad.mit.edu	37	9	116270673	116270673	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS3	5998	broad.mit.edu	37	9	116270673	116270673	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS7	6000	broad.mit.edu	37	1	241094093	241094093	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS7	6000	broad.mit.edu	37	1	241094093	241094093	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RICTOR	253260	broad.mit.edu	37	5	38959970	38959970	+	Silent	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RICTOR	253260	broad.mit.edu	37	5	38959970	38959970	+	Silent	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RINT1	60561	broad.mit.edu	37	7	105190829	105190829	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RINT1	60561	broad.mit.edu	37	7	105190829	105190829	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RLF	6018	broad.mit.edu	37	1	40706012	40706012	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RLF	6018	broad.mit.edu	37	1	40706012	40706012	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF17	56163	broad.mit.edu	37	13	25367307	25367307	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF17	56163	broad.mit.edu	37	13	25367307	25367307	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF180	285671	broad.mit.edu	37	5	63507852	63507852	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF180	285671	broad.mit.edu	37	5	63507852	63507852	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF25	64320	broad.mit.edu	37	2	219532829	219532829	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF25	64320	broad.mit.edu	37	2	219532829	219532829	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RP2	6102	broad.mit.edu	37	X	46712938	46712938	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RP2	6102	broad.mit.edu	37	X	46712938	46712938	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPE65	6121	broad.mit.edu	37	1	68910312	68910312	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPE65	6121	broad.mit.edu	37	1	68910312	68910312	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPL31P11	641311	broad.mit.edu	37	1	161655026	161655026	+	RNA	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPL31P11	641311	broad.mit.edu	37	1	161655026	161655026	+	RNA	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPS6KA6	27330	broad.mit.edu	37	X	83362701	83362701	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPS6KA6	27330	broad.mit.edu	37	X	83319979	83319979	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPS6KA6	27330	broad.mit.edu	37	X	83362701	83362701	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RRAD	6236	broad.mit.edu	37	16	66957517	66957517	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RRAD	6236	broad.mit.edu	37	16	66957517	66957517	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RREB1	6239	broad.mit.edu	37	6	7182319	7182319	+	Intron	SNP	A	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RREB1	6239	broad.mit.edu	37	6	7182319	7182319	+	Intron	SNP	A	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RRP1	8568	broad.mit.edu	37	21	45213249	45213249	+	Silent	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RRP1	8568	broad.mit.edu	37	21	45213249	45213249	+	Silent	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSU1	6251	broad.mit.edu	37	10	16794557	16794557	+	Silent	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSU1	6251	broad.mit.edu	37	10	16794557	16794557	+	Silent	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTBDN	83546	broad.mit.edu	37	19	12940505	12940505	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUFY2	55680	broad.mit.edu	37	10	70154089	70154089	+	Nonsense_Mutation	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUFY2	55680	broad.mit.edu	37	10	70154089	70154089	+	Nonsense_Mutation	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUNX2	860	broad.mit.edu	37	6	45515072	45515072	+	3'UTR	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUNX2	860	broad.mit.edu	37	6	45515072	45515072	+	3'UTR	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RWDD3	25950	broad.mit.edu	37	1	95712169	95712169	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RWDD3	25950	broad.mit.edu	37	1	95712169	95712169	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237551419	237551419	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237806644	237806644	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237551419	237551419	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237806644	237806644	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237886377	237886377	+	Intron	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR3	6263	broad.mit.edu	37	15	33928776	33928776	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR3	6263	broad.mit.edu	37	15	33954863	33954863	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR3	6263	broad.mit.edu	37	15	33928776	33928776	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR3	6263	broad.mit.edu	37	15	33954863	33954863	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
S100A7	6278	broad.mit.edu	37	1	153430435	153430435	+	Silent	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
S100A7	6278	broad.mit.edu	37	1	153430435	153430435	+	Silent	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMD9L	219285	broad.mit.edu	37	7	92764239	92764239	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMD9L	219285	broad.mit.edu	37	7	92764239	92764239	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SATB2	23314	broad.mit.edu	37	2	200246493	200246493	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SATB2	23314	broad.mit.edu	37	2	200246493	200246493	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SBF1	6305	broad.mit.edu	37	22	50906884	50906884	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SBF1	6305	broad.mit.edu	37	22	50906884	50906884	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCARF2	91179	broad.mit.edu	37	22	20786212	20786212	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCARF2	91179	broad.mit.edu	37	22	20786212	20786212	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCLT1	132320	broad.mit.edu	37	4	129812124	129812124	+	Intron	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCLT1	132320	broad.mit.edu	37	4	129812124	129812124	+	Intron	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN10A	6336	broad.mit.edu	37	3	38750953	38750953	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN10A	6336	broad.mit.edu	37	3	38750953	38750953	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN4A	6329	broad.mit.edu	37	17	62045265	62045265	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN4A	6329	broad.mit.edu	37	17	62045265	62045265	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCRN3	79634	broad.mit.edu	37	2	175265748	175265748	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCRN3	79634	broad.mit.edu	37	2	175265748	175265748	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDHAP1	255812	broad.mit.edu	37	3	195701425	195701425	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDHAP1	255812	broad.mit.edu	37	3	195701425	195701425	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDR16C5	195814	broad.mit.edu	37	8	57228653	57228653	+	Missense_Mutation	SNP	C	A	A	rs141509977		TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDR16C5	195814	broad.mit.edu	37	8	57228653	57228653	+	Missense_Mutation	SNP	C	A	A	rs141509977		TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDSL	113675	broad.mit.edu	37	12	113873251	113873251	+	Silent	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDSL	113675	broad.mit.edu	37	12	113873251	113873251	+	Silent	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC14L5	9717	broad.mit.edu	37	16	5064946	5064946	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC14L5	9717	broad.mit.edu	37	16	5064946	5064946	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC16B	89866	broad.mit.edu	37	1	177906305	177906305	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC16B	89866	broad.mit.edu	37	1	177906305	177906305	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC31A	22872	broad.mit.edu	37	4	83791564	83791564	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC31A	22872	broad.mit.edu	37	4	83791564	83791564	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC61A1	29927	broad.mit.edu	37	3	127788410	127788410	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SELS	55829	broad.mit.edu	37	15	101814919	101814919	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SELS	55829	broad.mit.edu	37	15	101814919	101814919	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA3G	56920	broad.mit.edu	37	3	52474799	52474799	+	Silent	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINB9	5272	broad.mit.edu	37	6	2890614	2890614	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEZ6L	23544	broad.mit.edu	37	22	26690269	26690269	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEZ6L	23544	broad.mit.edu	37	22	26690269	26690269	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFRS14	10147	broad.mit.edu	37	19	19121141	19121141	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFRS14	10147	broad.mit.edu	37	19	19121141	19121141	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGEF	26084	broad.mit.edu	37	3	153958135	153958135	+	Intron	SNP	T	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGEF	26084	broad.mit.edu	37	3	153958135	153958135	+	Intron	SNP	T	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGMS2	166929	broad.mit.edu	37	4	108817064	108817064	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGMS2	166929	broad.mit.edu	37	4	108817064	108817064	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHCBP1	79801	broad.mit.edu	37	16	46615701	46615701	+	Silent	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHKBP1	92799	broad.mit.edu	37	19	41086395	41086395	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHKBP1	92799	broad.mit.edu	37	19	41086395	41086395	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A9	56996	broad.mit.edu	37	7	100457737	100457737	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A9	56996	broad.mit.edu	37	7	100457737	100457737	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC13A3	64849	broad.mit.edu	37	20	45195114	45195114	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC13A3	64849	broad.mit.edu	37	20	45195114	45195114	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC16A1	6566	broad.mit.edu	37	1	113456568	113456568	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC16A1	6566	broad.mit.edu	37	1	113456568	113456568	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC17A3	10786	broad.mit.edu	37	6	25862059	25862059	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC17A3	10786	broad.mit.edu	37	6	25862059	25862059	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC18A2	6571	broad.mit.edu	37	10	119012998	119012998	+	Intron	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC18A2	6571	broad.mit.edu	37	10	119012998	119012998	+	Intron	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC1A2	6506	broad.mit.edu	37	11	35287030	35287030	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC1A2	6506	broad.mit.edu	37	11	35287030	35287030	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A8	9376	broad.mit.edu	37	11	62782143	62782143	+	Silent	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A8	9376	broad.mit.edu	37	11	62782143	62782143	+	Silent	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A32	81034	broad.mit.edu	37	8	104412574	104412574	+	3'UTR	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A32	81034	broad.mit.edu	37	8	104412574	104412574	+	3'UTR	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A42	284439	broad.mit.edu	37	19	19216420	19216420	+	Silent	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A42	284439	broad.mit.edu	37	19	19216420	19216420	+	Silent	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC39A5	283375	broad.mit.edu	37	12	56630712	56630712	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC39A5	283375	broad.mit.edu	37	12	56630712	56630712	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC47A1	55244	broad.mit.edu	37	17	19470344	19470344	+	Intron	SNP	G	T	T	rs114637940	by1000genomes	TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A11	83959	broad.mit.edu	37	20	3208896	3208896	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A11	83959	broad.mit.edu	37	20	3208896	3208896	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A4	8671	broad.mit.edu	37	4	72319139	72319139	+	Intron	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A4	8671	broad.mit.edu	37	4	72319139	72319139	+	Intron	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A8	9498	broad.mit.edu	37	12	51864385	51864385	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A8	9498	broad.mit.edu	37	12	51864385	51864385	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A4	6527	broad.mit.edu	37	22	32633298	32633298	+	Silent	SNP	C	A	A	rs142506993		TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A4	6527	broad.mit.edu	37	22	32633298	32633298	+	Silent	SNP	C	A	A	rs142506993		TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A9	200010	broad.mit.edu	37	1	48694784	48694784	+	Intron	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A9	200010	broad.mit.edu	37	1	48694784	48694784	+	Intron	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A11	6538	broad.mit.edu	37	3	10861452	10861466	+	In_Frame_Del	DEL	CATCCTGGCATGGGC	-	-			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A11	6538	broad.mit.edu	37	3	10861452	10861466	+	In_Frame_Del	DEL	CATCCTGGCATGGGC	-	-			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A17	388662	broad.mit.edu	37	1	110734898	110734898	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A17	388662	broad.mit.edu	37	1	110734898	110734898	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A9	6536	broad.mit.edu	37	1	44482674	44482674	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC7A7	9056	broad.mit.edu	37	14	23282099	23282099	+	Intron	DEL	C	-	-			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC7A7	9056	broad.mit.edu	37	14	23282099	23282099	+	Intron	DEL	C	-	-			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC8A2	6543	broad.mit.edu	37	19	47940832	47940832	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC8A2	6543	broad.mit.edu	37	19	47940832	47940832	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A3R1	9368	broad.mit.edu	37	17	72764254	72764254	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A3R1	9368	broad.mit.edu	37	17	72764254	72764254	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO4A1	28231	broad.mit.edu	37	20	61299285	61299285	+	Intron	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO4A1	28231	broad.mit.edu	37	20	61299285	61299285	+	Intron	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLITRK4	139065	broad.mit.edu	37	X	142716499	142716499	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLITRK4	139065	broad.mit.edu	37	X	142716499	142716499	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMAD2	4087	broad.mit.edu	37	18	45371730	45371730	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMAD2	4087	broad.mit.edu	37	18	45371730	45371730	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCC1	6599	broad.mit.edu	37	3	47752263	47752263	+	Silent	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCC1	6599	broad.mit.edu	37	3	47752263	47752263	+	Silent	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMC1B	27127	broad.mit.edu	37	22	45795281	45795281	+	Intron	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMC1B	27127	broad.mit.edu	37	22	45795281	45795281	+	Intron	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMCR7	125170	broad.mit.edu	37	17	18167939	18167939	+	Missense_Mutation	SNP	T	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMCR7	125170	broad.mit.edu	37	17	18167939	18167939	+	Missense_Mutation	SNP	T	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMNDC1	10285	broad.mit.edu	37	10	112053973	112053973	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMNDC1	10285	broad.mit.edu	37	10	112053973	112053973	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMTNL2	342527	broad.mit.edu	37	17	4498477	4498477	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMTNL2	342527	broad.mit.edu	37	17	4498477	4498477	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMYD2	56950	broad.mit.edu	37	1	214478428	214478428	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMYD2	56950	broad.mit.edu	37	1	214478428	214478428	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNAR-I	100170222	broad.mit.edu	37	3	190594320	190594320	+	5'Flank	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNAR-I	100170222	broad.mit.edu	37	3	190594320	190594320	+	5'Flank	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNCAIP	9627	broad.mit.edu	37	5	121786248	121786248	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNCAIP	9627	broad.mit.edu	37	5	121786248	121786248	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SND1	27044	broad.mit.edu	37	7	127498048	127498048	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SND1	27044	broad.mit.edu	37	7	127498048	127498048	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD116-4	100033416	broad.mit.edu	37	15	25328041	25328041	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD116-4	100033416	broad.mit.edu	37	15	25344602	25344602	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD116-4	100033416	broad.mit.edu	37	15	25328041	25328041	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD116-4	100033416	broad.mit.edu	37	15	25344602	25344602	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNTG1	54212	broad.mit.edu	37	8	51442842	51442843	+	Intron	DNP	CA	AG	AG			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNTG1	54212	broad.mit.edu	37	8	51442842	51442843	+	Intron	DNP	CA	AG	AG			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX16	64089	broad.mit.edu	37	8	82720636	82720636	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX16	64089	broad.mit.edu	37	8	82720636	82720636	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS3	22986	broad.mit.edu	37	10	106918652	106918652	+	Silent	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS3	22986	broad.mit.edu	37	10	106960956	106960956	+	Missense_Mutation	SNP	C	A	A	rs145883987		TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS3	22986	broad.mit.edu	37	10	106976592	106976592	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS3	22986	broad.mit.edu	37	10	106918652	106918652	+	Silent	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS3	22986	broad.mit.edu	37	10	106960956	106960956	+	Missense_Mutation	SNP	C	A	A	rs145883987		TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS3	22986	broad.mit.edu	37	10	106976592	106976592	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG7	9552	broad.mit.edu	37	17	4863187	4863187	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG7	9552	broad.mit.edu	37	17	4863187	4863187	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATA13	221178	broad.mit.edu	37	13	24697412	24697412	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATA13	221178	broad.mit.edu	37	13	24697412	24697412	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATA16	83893	broad.mit.edu	37	3	172766664	172766664	+	Intron	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATA16	83893	broad.mit.edu	37	3	172766664	172766664	+	Intron	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATA2	9825	broad.mit.edu	37	20	48522885	48522885	+	Silent	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPRED2	200734	broad.mit.edu	37	2	65561881	65561881	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTBN5	51332	broad.mit.edu	37	15	42166580	42166580	+	Silent	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTBN5	51332	broad.mit.edu	37	15	42166580	42166580	+	Silent	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRP54	6729	broad.mit.edu	37	14	35498244	35498244	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRP54	6729	broad.mit.edu	37	14	35498244	35498244	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRPK1	6732	broad.mit.edu	37	6	35837307	35837307	+	Missense_Mutation	SNP	A	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRPK1	6732	broad.mit.edu	37	6	35837307	35837307	+	Missense_Mutation	SNP	A	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRPR	6734	broad.mit.edu	37	11	126134327	126134327	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRPR	6734	broad.mit.edu	37	11	126134327	126134327	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRPX2	27286	broad.mit.edu	37	X	99920554	99920554	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRPX2	27286	broad.mit.edu	37	X	99920554	99920554	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRRM2	23524	broad.mit.edu	37	16	2812991	2812991	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRRM2	23524	broad.mit.edu	37	16	2812991	2812991	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSPO	23145	broad.mit.edu	37	7	149492429	149492429	+	Silent	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSPO	23145	broad.mit.edu	37	7	149492429	149492429	+	Silent	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSX3	10214	broad.mit.edu	37	X	48218288	48218288	+	5'Flank	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSX3	10214	broad.mit.edu	37	X	48218828	48218828	+	5'Flank	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSX3	10214	broad.mit.edu	37	X	48218288	48218288	+	5'Flank	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSX3	10214	broad.mit.edu	37	X	48218828	48218828	+	5'Flank	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST5	6764	broad.mit.edu	37	11	8715638	8715638	+	3'UTR	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST5	6764	broad.mit.edu	37	11	8715638	8715638	+	3'UTR	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAB1	23166	broad.mit.edu	37	3	52550187	52550187	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAB1	23166	broad.mit.edu	37	3	52550345	52550345	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAB1	23166	broad.mit.edu	37	3	52550187	52550187	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAB1	23166	broad.mit.edu	37	3	52550345	52550345	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAG2	10735	broad.mit.edu	37	X	123200293	123200293	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAG2	10735	broad.mit.edu	37	X	123200293	123200293	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STEAP1	26872	broad.mit.edu	37	7	89790346	89790352	+	Frame_Shift_Del	DEL	ATATTTT	-	-			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STEAP1	26872	broad.mit.edu	37	7	89790346	89790352	+	Frame_Shift_Del	DEL	ATATTTT	-	-			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SULT1C2	6819	broad.mit.edu	37	2	108910768	108910768	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SULT1C2	6819	broad.mit.edu	37	2	108910768	108910768	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SV2A	9900	broad.mit.edu	37	1	149877499	149877499	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SV2A	9900	broad.mit.edu	37	1	149877499	149877499	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYCE1	93426	broad.mit.edu	37	10	135368857	135368857	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYCE1	93426	broad.mit.edu	37	10	135368857	135368857	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYCP2	10388	broad.mit.edu	37	20	58456602	58456602	+	Intron	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYCP2	10388	broad.mit.edu	37	20	58456602	58456602	+	Intron	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNJ1	8867	broad.mit.edu	37	21	34017287	34017287	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNJ1	8867	broad.mit.edu	37	21	34017287	34017287	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT12	91683	broad.mit.edu	37	11	66811071	66811071	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT12	91683	broad.mit.edu	37	11	66811071	66811071	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT7	9066	broad.mit.edu	37	11	61291201	61291201	+	Intron	SNP	T	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT7	9066	broad.mit.edu	37	11	61291201	61291201	+	Intron	SNP	T	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYTL2	54843	broad.mit.edu	37	11	85436161	85436161	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYTL2	54843	broad.mit.edu	37	11	85468707	85468707	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYTL2	54843	broad.mit.edu	37	11	85436161	85436161	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAB1	10454	broad.mit.edu	37	22	39811496	39811496	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAB1	10454	broad.mit.edu	37	22	39811496	39811496	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAC1	6863	broad.mit.edu	37	7	97362151	97362151	+	Intron	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAC1	6863	broad.mit.edu	37	7	97362151	97362151	+	Intron	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF2	6873	broad.mit.edu	37	8	120843891	120843891	+	Intron	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF2	6873	broad.mit.edu	37	8	120843891	120843891	+	Intron	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF3	83860	broad.mit.edu	37	10	8019213	8019213	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF3	83860	broad.mit.edu	37	10	8019213	8019213	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAOK1	57551	broad.mit.edu	37	17	27861114	27861115	+	Intron	DEL	TC	-	-	rs80075693		TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAS2R19	259294	broad.mit.edu	37	12	11174720	11174720	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAS2R19	259294	broad.mit.edu	37	12	11174720	11174720	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAS2R39	259285	broad.mit.edu	37	7	142881181	142881181	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAS2R39	259285	broad.mit.edu	37	7	142881181	142881181	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAS2R3	50831	broad.mit.edu	37	7	141464496	141464496	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAS2R3	50831	broad.mit.edu	37	7	141464496	141464496	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D3C	414060	broad.mit.edu	37	17	34641353	34641353	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D3C	414060	broad.mit.edu	37	17	34641353	34641353	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBXAS1	6916	broad.mit.edu	37	7	139657365	139657365	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBXAS1	6916	broad.mit.edu	37	7	139657368	139657368	+	Intron	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBXAS1	6916	broad.mit.edu	37	7	139657365	139657365	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBXAS1	6916	broad.mit.edu	37	7	139657368	139657368	+	Intron	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCEA1	6917	broad.mit.edu	37	8	54934578	54934578	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCEA1	6917	broad.mit.edu	37	8	54934578	54934578	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCF4	6925	broad.mit.edu	37	18	53254163	53254164	+	Intron	DNP	CC	AA	AA			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCF4	6925	broad.mit.edu	37	18	53254163	53254164	+	Intron	DNP	CC	AA	AA			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCHHL1	126637	broad.mit.edu	37	1	152058337	152058337	+	Silent	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCHHL1	126637	broad.mit.edu	37	1	152058337	152058337	+	Silent	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCL6	27004	broad.mit.edu	37	14	96134559	96134559	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCL6	27004	broad.mit.edu	37	14	96134559	96134559	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TENC1	23371	broad.mit.edu	37	12	53442938	53442938	+	5'Flank	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TENC1	23371	broad.mit.edu	37	12	53442938	53442938	+	5'Flank	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THADA	63892	broad.mit.edu	37	2	43805813	43805813	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THADA	63892	broad.mit.edu	37	2	43805813	43805813	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TKTL2	84076	broad.mit.edu	37	4	164392983	164392983	+	3'UTR	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TKTL2	84076	broad.mit.edu	37	4	164392983	164392983	+	3'UTR	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLR1	7096	broad.mit.edu	37	4	38799759	38799759	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLR1	7096	broad.mit.edu	37	4	38799759	38799759	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLR4	7099	broad.mit.edu	37	9	120475379	120475379	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM126B	55863	broad.mit.edu	37	11	85345207	85345207	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM126B	55863	broad.mit.edu	37	11	85345207	85345207	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM132B	114795	broad.mit.edu	37	12	126068669	126068669	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM132B	114795	broad.mit.edu	37	12	126068669	126068669	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM145	284339	broad.mit.edu	37	19	42819386	42819386	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM145	284339	broad.mit.edu	37	19	42819403	42819403	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM145	284339	broad.mit.edu	37	19	42819386	42819386	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM145	284339	broad.mit.edu	37	19	42819403	42819403	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM146	257062	broad.mit.edu	37	19	5763373	5763373	+	Intron	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM146	257062	broad.mit.edu	37	19	5763373	5763373	+	Intron	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM71	137835	broad.mit.edu	37	8	133764161	133764161	+	Missense_Mutation	SNP	G	T	T	rs149569607	byFrequency;by1000genomes	TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM71	137835	broad.mit.edu	37	8	133764161	133764161	+	Missense_Mutation	SNP	G	T	T	rs149569607	byFrequency;by1000genomes	TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMLHE	55217	broad.mit.edu	37	X	154736778	154736778	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMLHE	55217	broad.mit.edu	37	X	154736778	154736778	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS15	5651	broad.mit.edu	37	21	19737657	19737657	+	Intron	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS15	5651	broad.mit.edu	37	21	19737657	19737657	+	Intron	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNIK	23043	broad.mit.edu	37	3	170819320	170819320	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNNI3K	51086	broad.mit.edu	37	1	74663994	74663994	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNNI3K	51086	broad.mit.edu	37	1	74663994	74663994	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNN	63923	broad.mit.edu	37	1	175113667	175113667	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNN	63923	broad.mit.edu	37	1	175113667	175113667	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNRC6B	23112	broad.mit.edu	37	22	40711595	40711595	+	Intron	SNP	C	A	A	rs111358619		TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNRC6B	23112	broad.mit.edu	37	22	40711595	40711595	+	Intron	SNP	C	A	A	rs111358619		TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNR	7143	broad.mit.edu	37	1	175375383	175375383	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNR	7143	broad.mit.edu	37	1	175375383	175375383	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP53I3	9540	broad.mit.edu	37	2	24303723	24303723	+	Missense_Mutation	SNP	C	A	A	rs61758081	byFrequency;by1000genomes	TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP53I3	9540	broad.mit.edu	37	2	24303723	24303723	+	Missense_Mutation	SNP	C	A	A	rs61758081	byFrequency;by1000genomes	TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP53	7157	broad.mit.edu	37	17	7577547	7577547	+	Missense_Mutation	SNP	C	A	A	rs121912656		TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP53	7157	broad.mit.edu	37	17	7577547	7577547	+	Missense_Mutation	SNP	C	A	A	rs121912656		TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP63	8626	broad.mit.edu	37	3	189612133	189612133	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP63	8626	broad.mit.edu	37	3	189612133	189612133	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPK1	27010	broad.mit.edu	37	7	144364957	144364957	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPK1	27010	broad.mit.edu	37	7	144364957	144364957	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPM3	7170	broad.mit.edu	37	1	154141852	154141852	+	Silent	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPM3	7170	broad.mit.edu	37	1	154141852	154141852	+	Silent	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE2	93492	broad.mit.edu	37	13	20024537	20024537	+	Intron	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE2	93492	broad.mit.edu	37	13	20024537	20024537	+	Intron	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE	7179	broad.mit.edu	37	21	10998441	10998441	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE	7179	broad.mit.edu	37	21	10998441	10998441	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAF7	84231	broad.mit.edu	37	16	2213961	2213961	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAF7	84231	broad.mit.edu	37	16	2213961	2213961	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAPPC9	83696	broad.mit.edu	37	8	141262908	141262908	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAPPC9	83696	broad.mit.edu	37	8	141262908	141262908	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRDMT1	1787	broad.mit.edu	37	10	17204260	17204260	+	Intron	SNP	A	C	C	rs61159799	by1000genomes	TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRDMT1	1787	broad.mit.edu	37	10	17204260	17204260	+	Intron	SNP	A	C	C	rs61159799	by1000genomes	TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TREH	11181	broad.mit.edu	37	11	118532290	118532290	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TREH	11181	broad.mit.edu	37	11	118532290	118532290	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TREM1	54210	broad.mit.edu	37	6	41250404	41250404	+	Silent	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TREM1	54210	broad.mit.edu	37	6	41250404	41250404	+	Silent	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TREML2	79865	broad.mit.edu	37	6	41168762	41168762	+	5'UTR	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TREML2	79865	broad.mit.edu	37	6	41168762	41168762	+	5'UTR	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM15	89870	broad.mit.edu	37	6	30131581	30131582	+	Frame_Shift_Del	DEL	CC	-	-			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM15	89870	broad.mit.edu	37	6	30131581	30131582	+	Frame_Shift_Del	DEL	CC	-	-			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM16L	147166	broad.mit.edu	37	17	18631143	18631143	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM16L	147166	broad.mit.edu	37	17	18631143	18631143	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM23	373	broad.mit.edu	37	5	64887114	64887114	+	3'UTR	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM23	373	broad.mit.edu	37	5	64887114	64887114	+	3'UTR	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM27	5987	broad.mit.edu	37	6	28876885	28876885	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM27	5987	broad.mit.edu	37	6	28876885	28876885	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIO	7204	broad.mit.edu	37	5	14479403	14479403	+	Nonsense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRMT6	51605	broad.mit.edu	37	20	5930811	5930811	+	Intron	DEL	C	-	-			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRMT6	51605	broad.mit.edu	37	20	5930811	5930811	+	Intron	DEL	C	-	-			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPC4	7223	broad.mit.edu	37	13	38225610	38225610	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPC4	7223	broad.mit.edu	37	13	38225610	38225610	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPV3	162514	broad.mit.edu	37	17	3417124	3417124	+	3'UTR	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPV3	162514	broad.mit.edu	37	17	3417124	3417124	+	3'UTR	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPV4	59341	broad.mit.edu	37	12	110232363	110232363	+	Intron	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPV4	59341	broad.mit.edu	37	12	110232363	110232363	+	Intron	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRRAP	8295	broad.mit.edu	37	7	98509602	98509602	+	Intron	DEL	G	-	-			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRRAP	8295	broad.mit.edu	37	7	98509602	98509602	+	Intron	DEL	G	-	-			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC39B	158219	broad.mit.edu	37	9	15187037	15187037	+	Intron	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC39B	158219	broad.mit.edu	37	9	15187037	15187037	+	Intron	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC3	7267	broad.mit.edu	37	21	38538450	38538450	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC3	7267	broad.mit.edu	37	21	38538450	38538450	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTF2	8458	broad.mit.edu	37	1	117631543	117631543	+	Missense_Mutation	SNP	C	A	A	rs35565289	byFrequency	TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTF2	8458	broad.mit.edu	37	1	117631543	117631543	+	Missense_Mutation	SNP	C	A	A	rs35565289	byFrequency	TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTLL10	254173	broad.mit.edu	37	1	1115671	1115671	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTLL10	254173	broad.mit.edu	37	1	1115671	1115671	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179544735	179544735	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179560074	179560074	+	Splice_Site	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179544735	179544735	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179560074	179560074	+	Splice_Site	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBG1	7283	broad.mit.edu	37	17	40766905	40766905	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBG1	7283	broad.mit.edu	37	17	40766905	40766905	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUB	7275	broad.mit.edu	37	11	8060490	8060490	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUB	7275	broad.mit.edu	37	11	8060490	8060490	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBAC2	337867	broad.mit.edu	37	13	100008238	100008238	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBAC2	337867	broad.mit.edu	37	13	100008238	100008238	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBASH3A	53347	broad.mit.edu	37	21	43833586	43833586	+	Missense_Mutation	SNP	C	A	A	rs144816086		TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBASH3A	53347	broad.mit.edu	37	21	43833586	43833586	+	Missense_Mutation	SNP	C	A	A	rs144816086		TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBC	7316	broad.mit.edu	37	12	125397469	125397469	+	Silent	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBTF	7343	broad.mit.edu	37	17	42290100	42290100	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBTF	7343	broad.mit.edu	37	17	42290100	42290100	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBXN2B	137886	broad.mit.edu	37	8	59339010	59339010	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBXN2B	137886	broad.mit.edu	37	8	59339010	59339010	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UFC1	51506	broad.mit.edu	37	1	161123854	161123854	+	Silent	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UFC1	51506	broad.mit.edu	37	1	161123854	161123854	+	Silent	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGGT1	56886	broad.mit.edu	37	2	128935270	128935270	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGGT1	56886	broad.mit.edu	37	2	128935270	128935270	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT1A5	54579	broad.mit.edu	37	2	234675589	234675589	+	Intron	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT1A5	54579	broad.mit.edu	37	2	234675589	234675589	+	Intron	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT1A5	54579	broad.mit.edu	37	2	234681013	234681013	+	Silent	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B15	7366	broad.mit.edu	37	4	69512760	69512760	+	3'UTR	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B15	7366	broad.mit.edu	37	4	69512760	69512760	+	3'UTR	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B28	54490	broad.mit.edu	37	4	70155482	70155482	+	Intron	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B28	54490	broad.mit.edu	37	4	70155482	70155482	+	Intron	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B7	7364	broad.mit.edu	37	4	69962775	69962775	+	Silent	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UHRF1BP1	54887	broad.mit.edu	37	6	34827440	34827440	+	Intron	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UHRF1BP1	54887	broad.mit.edu	37	6	34827440	34827440	+	Intron	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC13A	23025	broad.mit.edu	37	19	17720621	17720621	+	Intron	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC13A	23025	broad.mit.edu	37	19	17758070	17758070	+	Intron	SNP	T	C	C	rs113053103		TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC13A	23025	broad.mit.edu	37	19	17777334	17777334	+	Intron	SNP	A	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC13A	23025	broad.mit.edu	37	19	17720621	17720621	+	Intron	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC13A	23025	broad.mit.edu	37	19	17777334	17777334	+	Intron	SNP	A	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UPRT	139596	broad.mit.edu	37	X	74513438	74513438	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UPRT	139596	broad.mit.edu	37	X	74513438	74513438	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
URB2	9816	broad.mit.edu	37	1	229771885	229771885	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
URB2	9816	broad.mit.edu	37	1	229771885	229771885	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UROC1	131669	broad.mit.edu	37	3	126201093	126201093	+	3'UTR	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UROC1	131669	broad.mit.edu	37	3	126201093	126201093	+	3'UTR	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216405189	216405189	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216500900	216500900	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216405189	216405189	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216500900	216500900	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP7	7874	broad.mit.edu	37	16	8990919	8990919	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP7	7874	broad.mit.edu	37	16	8990919	8990919	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTS2D	257313	broad.mit.edu	37	3	190993124	190993124	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTS2D	257313	broad.mit.edu	37	3	190993124	190993124	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	18978267	18978267	+	IGR	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	34452853	34452853	+	IGR	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	41681642	41681642	+	IGR	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	48930307	48930307	+	IGR	SNP	C	A	A	rs115190417	by1000genomes	TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	48970129	48970129	+	IGR	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49053258	49053258	+	IGR	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49055748	49055748	+	IGR	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55070153	55070153	+	IGR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55351069	55351069	+	IGR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55933186	55933186	+	IGR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	56143797	56143797	+	IGR	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	6867902	6867902	+	IGR	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	71340280	71340280	+	IGR	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	86735646	86735646	+	IGR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	127828992	127828992	+	IGR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	80648235	80648235	+	IGR	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	80661057	80661057	+	IGR	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	8167691	8167691	+	IGR	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	8167718	8167718	+	IGR	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	90313365	90313366	+	IGR	DNP	CC	TT	TT			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	19466297	19466297	+	IGR	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	59584736	59584736	+	IGR	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	61211580	61211580	+	IGR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	101393781	101393781	+	IGR	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20137559	20137559	+	IGR	SNP	C	A	A	rs139526028	by1000genomes	TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20137658	20137658	+	IGR	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20147890	20147890	+	IGR	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	43744624	43744624	+	IGR	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	69328460	69328460	+	IGR	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	70712347	70712347	+	IGR	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	95267703	95267703	+	IGR	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	22448731	22448731	+	IGR	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	49265164	49265164	+	IGR	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	95398791	95398791	+	IGR	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	31985061	31985061	+	IGR	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32823673	32823673	+	IGR	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33020672	33020672	+	IGR	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33372875	33372875	+	IGR	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33768528	33768528	+	IGR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33781366	33781366	+	IGR	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	34326459	34326459	+	IGR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	34582588	34582588	+	IGR	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	34956825	34956825	+	IGR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	48531363	48531364	+	IGR	DNP	GG	TT	TT			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	18345548	18345548	+	IGR	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	58331244	58331244	+	IGR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	15027871	15027871	+	IGR	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	22697363	22697363	+	IGR	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	22882491	22882491	+	IGR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	30528215	30528215	+	IGR	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	51694167	51694167	+	IGR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	106433270	106433270	+	IGR	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	166245300	166245300	+	IGR	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	187532638	187532638	+	IGR	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	187533014	187533014	+	IGR	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	192963305	192963305	+	IGR	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	203924937	203924937	+	IGR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	228823503	228823503	+	IGR	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	237144887	237144887	+	IGR	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	238655545	238655545	+	IGR	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	246677145	246677145	+	IGR	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	10899257	10899257	+	IGR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	15309593	15309593	+	IGR	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	21798542	21798542	+	IGR	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	28233436	28233437	+	IGR	DNP	CC	AA	AA	rs111614421		TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	16405665	16405665	+	IGR	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	30928708	30928708	+	IGR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	183935995	183935995	+	IGR	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	187867474	187867474	+	IGR	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	52799635	52799635	+	IGR	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	81424592	81424593	+	IGR	DNP	TG	GT	GT			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	180041068	180041068	+	IGR	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	195723918	195723919	+	IGR	INS	-	G	G	rs56325048		TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	36673407	36673407	+	IGR	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	36808635	36808635	+	IGR	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	97958013	97958013	+	IGR	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	63683064	63683064	+	IGR	SNP	A	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	69416468	69416468	+	IGR	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	69433400	69433400	+	IGR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	10665278	10665278	+	IGR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	126848185	126848185	+	IGR	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	136193855	136193855	+	IGR	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	20304924	20304924	+	IGR	SNP	A	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	23304948	23304948	+	IGR	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	25909568	25909568	+	IGR	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	25910253	25910253	+	IGR	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	25911326	25911326	+	IGR	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	42972849	42972849	+	IGR	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	55572150	55572150	+	IGR	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	65868282	65868282	+	IGR	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	86180296	86180297	+	IGR	DNP	GG	TT	TT			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	133318991	133318991	+	IGR	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	66547191	66547191	+	IGR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	87439736	87439736	+	IGR	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	137805929	137805929	+	IGR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	137982959	137982959	+	IGR	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142605643	142605643	+	IGR	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	145280629	145280629	+	IGR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	149018927	149018927	+	IGR	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	56296862	56296862	+	IGR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	56636203	56636203	+	IGR	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	57316729	57316729	+	IGR	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63475462	63475462	+	IGR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63601945	63601946	+	IGR	DNP	CA	AT	AT			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63895045	63895045	+	IGR	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	120493086	120493086	+	IGR	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	138710221	138710221	+	IGR	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	48114552	48114552	+	IGR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	136944222	136944222	+	IGR	SNP	G	T	T	rs764896	byFrequency;by1000genomes	TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	44078682	44078682	+	IGR	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	7478150	7478151	+	IGR	DNP	TA	AC	AC			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	98908892	98908892	+	IGR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	151073264	151073264	+	IGR	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	48024288	48024288	+	IGR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	48105209	48105209	+	IGR	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	48300152	48300152	+	IGR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	58012462	58012462	+	IGR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	63264830	63264830	+	IGR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	65295326	65295326	+	IGR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	73095471	73095471	+	IGR	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	79817532	79817532	+	IGR	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	99411212	99411212	+	IGR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	18978267	18978267	+	IGR	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	34452853	34452853	+	IGR	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	41681642	41681642	+	IGR	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	48930307	48930307	+	IGR	SNP	C	A	A	rs115190417	by1000genomes	TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	48970129	48970129	+	IGR	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49053258	49053258	+	IGR	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49055748	49055748	+	IGR	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55070153	55070153	+	IGR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55351069	55351069	+	IGR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55933186	55933186	+	IGR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	56143797	56143797	+	IGR	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	6867902	6867902	+	IGR	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	71340280	71340280	+	IGR	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	86735646	86735646	+	IGR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	127828992	127828992	+	IGR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	34318218	34318218	+	IGR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	80648235	80648235	+	IGR	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	80661057	80661057	+	IGR	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	90313365	90313366	+	IGR	DNP	CC	TT	TT			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	19466297	19466297	+	IGR	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	59584736	59584736	+	IGR	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	61211580	61211580	+	IGR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	101393781	101393781	+	IGR	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20137559	20137559	+	IGR	SNP	C	A	A	rs139526028	by1000genomes	TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20137658	20137658	+	IGR	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20147890	20147890	+	IGR	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	43744624	43744624	+	IGR	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	69328460	69328460	+	IGR	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	70712347	70712347	+	IGR	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	95267703	95267703	+	IGR	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	20178067	20178067	+	IGR	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	22448731	22448731	+	IGR	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	49265164	49265164	+	IGR	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	95398791	95398791	+	IGR	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	16457549	16457549	+	IGR	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	31985061	31985061	+	IGR	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32823673	32823673	+	IGR	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33020672	33020672	+	IGR	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33372875	33372875	+	IGR	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33768528	33768528	+	IGR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33781366	33781366	+	IGR	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	34326459	34326459	+	IGR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	34582588	34582588	+	IGR	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	34956825	34956825	+	IGR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	48531363	48531364	+	IGR	DNP	GG	TT	TT			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	18345548	18345548	+	IGR	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	15027871	15027871	+	IGR	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	21404958	21404958	+	IGR	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	22697363	22697363	+	IGR	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	22882491	22882491	+	IGR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	30528215	30528215	+	IGR	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	43719441	43719441	+	IGR	SNP	G	C	C	rs143065654	by1000genomes	TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	51694167	51694167	+	IGR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	106433270	106433270	+	IGR	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149089952	149089952	+	IGR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	166245300	166245300	+	IGR	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	187532638	187532638	+	IGR	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	187533014	187533014	+	IGR	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	192963305	192963305	+	IGR	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	203924937	203924937	+	IGR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	228823503	228823503	+	IGR	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	237144887	237144887	+	IGR	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	238655545	238655545	+	IGR	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	246677145	246677145	+	IGR	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	10899257	10899257	+	IGR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	15309593	15309593	+	IGR	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	21798542	21798542	+	IGR	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	28233436	28233437	+	IGR	DNP	CC	AA	AA	rs111614421		TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	16405665	16405665	+	IGR	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	30928708	30928708	+	IGR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	183935995	183935995	+	IGR	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	187867474	187867474	+	IGR	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	52799635	52799635	+	IGR	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	81424592	81424593	+	IGR	DNP	TG	GT	GT			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	180041068	180041068	+	IGR	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	36673407	36673407	+	IGR	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	36808635	36808635	+	IGR	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	97958013	97958013	+	IGR	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	63683064	63683064	+	IGR	SNP	A	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	69416469	69416469	+	IGR	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	69433400	69433400	+	IGR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	10665278	10665278	+	IGR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	126848185	126848185	+	IGR	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	136193855	136193855	+	IGR	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	20304924	20304924	+	IGR	SNP	A	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	23304948	23304948	+	IGR	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	25909568	25909568	+	IGR	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	25910253	25910253	+	IGR	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	25911326	25911326	+	IGR	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	42972849	42972849	+	IGR	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	55572150	55572150	+	IGR	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	65868282	65868282	+	IGR	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	77081495	77081495	+	IGR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	86180296	86180297	+	IGR	DNP	GG	TT	TT			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	133318991	133318991	+	IGR	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	66547191	66547191	+	IGR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	87439736	87439736	+	IGR	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	137805929	137805929	+	IGR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	137982959	137982959	+	IGR	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142605643	142605643	+	IGR	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	145280629	145280629	+	IGR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	149018927	149018927	+	IGR	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	56296862	56296862	+	IGR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	56636203	56636203	+	IGR	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	57316729	57316729	+	IGR	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63475462	63475462	+	IGR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63601945	63601946	+	IGR	DNP	CA	AT	AT			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63895045	63895045	+	IGR	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	120493086	120493086	+	IGR	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	138710221	138710221	+	IGR	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	48114552	48114552	+	IGR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	136944222	136944222	+	IGR	SNP	G	T	T	rs764896	byFrequency;by1000genomes	TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	7478150	7478151	+	IGR	DNP	TA	AC	AC			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	98908892	98908892	+	IGR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	118356994	118356994	+	IGR	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	151073264	151073264	+	IGR	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	48024288	48024288	+	IGR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	48105209	48105209	+	IGR	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	48300152	48300152	+	IGR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	58012462	58012462	+	IGR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	63264830	63264830	+	IGR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	65295326	65295326	+	IGR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	73095471	73095471	+	IGR	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	79817532	79817532	+	IGR	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	99411212	99411212	+	IGR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VARS2	57176	broad.mit.edu	37	6	30889123	30889123	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VARS2	57176	broad.mit.edu	37	6	30889123	30889123	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VASP	7408	broad.mit.edu	37	19	46025595	46025595	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VASP	7408	broad.mit.edu	37	19	46025595	46025595	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VIT	5212	broad.mit.edu	37	2	36943672	36943672	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VIT	5212	broad.mit.edu	37	2	36943672	36943672	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VMA21	203547	broad.mit.edu	37	X	150572049	150572049	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VMA21	203547	broad.mit.edu	37	X	150572049	150572049	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VN1R2	317701	broad.mit.edu	37	19	53762367	53762367	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VN1R2	317701	broad.mit.edu	37	19	53762367	53762367	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VNN1	8876	broad.mit.edu	37	6	133015075	133015075	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VNN1	8876	broad.mit.edu	37	6	133015075	133015075	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPRBP	9730	broad.mit.edu	37	3	51451366	51451366	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPRBP	9730	broad.mit.edu	37	3	51451366	51451366	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS33A	65082	broad.mit.edu	37	12	122723069	122723069	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS33A	65082	broad.mit.edu	37	12	122723069	122723069	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS41	27072	broad.mit.edu	37	7	38805348	38805348	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR13	64743	broad.mit.edu	37	X	48458017	48458017	+	Missense_Mutation	SNP	T	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR13	64743	broad.mit.edu	37	X	48458017	48458017	+	Missense_Mutation	SNP	T	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR36	134430	broad.mit.edu	37	5	110459809	110459809	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR36	134430	broad.mit.edu	37	5	110459809	110459809	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR63	126820	broad.mit.edu	37	1	85595688	85595688	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR63	126820	broad.mit.edu	37	1	85595688	85595688	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR66	144406	broad.mit.edu	37	12	122396790	122396790	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR66	144406	broad.mit.edu	37	12	122396790	122396790	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR90	197335	broad.mit.edu	37	16	706348	706348	+	Silent	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR90	197335	broad.mit.edu	37	16	706348	706348	+	Silent	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WFDC3	140686	broad.mit.edu	37	20	44417430	44417430	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WFDC3	140686	broad.mit.edu	37	20	44417430	44417430	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNK3	65267	broad.mit.edu	37	X	54264888	54264888	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNK3	65267	broad.mit.edu	37	X	54264888	54264888	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNT7A	7476	broad.mit.edu	37	3	13896097	13896097	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNT7A	7476	broad.mit.edu	37	3	13896097	13896097	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WSCD1	23302	broad.mit.edu	37	17	6012865	6012865	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XCL2	6846	broad.mit.edu	37	1	168511125	168511125	+	Intron	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIST	7503	broad.mit.edu	37	X	73071294	73071294	+	RNA	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIST	7503	broad.mit.edu	37	X	73071294	73071294	+	RNA	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPNPEP2	7512	broad.mit.edu	37	X	128890355	128890356	+	Intron	DNP	GG	TT	TT			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPNPEP2	7512	broad.mit.edu	37	X	128890355	128890356	+	Intron	DNP	GG	TT	TT			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XYLT1	64131	broad.mit.edu	37	16	17294297	17294297	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XYLT1	64131	broad.mit.edu	37	16	17294297	17294297	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZAN	7455	broad.mit.edu	37	7	100383910	100383910	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZAN	7455	broad.mit.edu	37	7	100383910	100383910	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBED4	9889	broad.mit.edu	37	22	50280471	50280471	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBED4	9889	broad.mit.edu	37	22	50280471	50280471	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3H7A	29066	broad.mit.edu	37	16	11861348	11861348	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3H7A	29066	broad.mit.edu	37	16	11861348	11861348	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZCCHC16	340595	broad.mit.edu	37	X	111624720	111624720	+	Intron	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZDBF2	57683	broad.mit.edu	37	2	207169464	207169464	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZDBF2	57683	broad.mit.edu	37	2	207169464	207169464	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZDHHC16	84287	broad.mit.edu	37	10	99214673	99214673	+	Intron	SNP	A	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZDHHC16	84287	broad.mit.edu	37	10	99214673	99214673	+	Intron	SNP	A	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZEB2	9839	broad.mit.edu	37	2	145147141	145147141	+	Silent	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZEB2	9839	broad.mit.edu	37	2	145147141	145147141	+	Silent	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFP64	55734	broad.mit.edu	37	20	50713850	50713850	+	Intron	SNP	C	T	T	rs147159936	by1000genomes	TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFP64	55734	broad.mit.edu	37	20	50776545	50776545	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFP64	55734	broad.mit.edu	37	20	50713850	50713850	+	Intron	SNP	C	T	T	rs147159936	by1000genomes	TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFP64	55734	broad.mit.edu	37	20	50776545	50776545	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZIM3	114026	broad.mit.edu	37	19	57646224	57646224	+	3'UTR	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZIM3	114026	broad.mit.edu	37	19	57646224	57646224	+	3'UTR	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZKSCAN2	342357	broad.mit.edu	37	16	25251807	25251807	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZKSCAN2	342357	broad.mit.edu	37	16	25251807	25251807	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMAT3	64393	broad.mit.edu	37	3	178785371	178785371	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMAT3	64393	broad.mit.edu	37	3	178785371	178785371	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMYND19	116225	broad.mit.edu	37	9	140483037	140483037	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMYND19	116225	broad.mit.edu	37	9	140483037	140483037	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF121	7675	broad.mit.edu	37	19	9677452	9677452	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF121	7675	broad.mit.edu	37	19	9677452	9677452	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF155	7711	broad.mit.edu	37	19	44501409	44501409	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF155	7711	broad.mit.edu	37	19	44501409	44501409	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF182	7569	broad.mit.edu	37	X	47862055	47862055	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF182	7569	broad.mit.edu	37	X	47862055	47862055	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF221	7638	broad.mit.edu	37	19	44470668	44470668	+	Silent	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF221	7638	broad.mit.edu	37	19	44470668	44470668	+	Silent	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF233	353355	broad.mit.edu	37	19	44778728	44778728	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF233	353355	broad.mit.edu	37	19	44778728	44778728	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF254	9534	broad.mit.edu	37	19	24288563	24288563	+	Intron	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF254	9534	broad.mit.edu	37	19	24288563	24288563	+	Intron	SNP	T	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF274	10782	broad.mit.edu	37	19	58723010	58723010	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF274	10782	broad.mit.edu	37	19	58723923	58723923	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF274	10782	broad.mit.edu	37	19	58723010	58723010	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF274	10782	broad.mit.edu	37	19	58723923	58723923	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF280C	55609	broad.mit.edu	37	X	129362946	129362946	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF280C	55609	broad.mit.edu	37	X	129362946	129362946	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF337	26152	broad.mit.edu	37	20	25667060	25667060	+	5'UTR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF337	26152	broad.mit.edu	37	20	25667060	25667060	+	5'UTR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF425	155054	broad.mit.edu	37	7	148801711	148801711	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF425	155054	broad.mit.edu	37	7	148801711	148801711	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF462	58499	broad.mit.edu	37	9	109690725	109690725	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF462	58499	broad.mit.edu	37	9	109690725	109690725	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF492	57615	broad.mit.edu	37	19	22847414	22847415	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF492	57615	broad.mit.edu	37	19	22847414	22847415	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF528	84436	broad.mit.edu	37	19	52918883	52918883	+	Nonsense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF536	9745	broad.mit.edu	37	19	30936456	30936456	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF536	9745	broad.mit.edu	37	19	31039052	31039052	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF536	9745	broad.mit.edu	37	19	30936456	30936456	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF536	9745	broad.mit.edu	37	19	31039052	31039052	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF547	284306	broad.mit.edu	37	19	57883008	57883008	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF547	284306	broad.mit.edu	37	19	57883008	57883008	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF559	84527	broad.mit.edu	37	19	9452607	9452607	+	Silent	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF559	84527	broad.mit.edu	37	19	9452607	9452607	+	Silent	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF585A	199704	broad.mit.edu	37	19	37643728	37643728	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF585A	199704	broad.mit.edu	37	19	37643728	37643728	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF606	80095	broad.mit.edu	37	19	58490898	58490898	+	Missense_Mutation	SNP	C	T	T	rs142065196	byFrequency	TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF606	80095	broad.mit.edu	37	19	58490898	58490898	+	Missense_Mutation	SNP	C	T	T	rs142065196	byFrequency	TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF610	162963	broad.mit.edu	37	19	52868949	52868949	+	Splice_Site	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF610	162963	broad.mit.edu	37	19	52868949	52868949	+	Splice_Site	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF619	285267	broad.mit.edu	37	3	40528914	40528914	+	Silent	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF619	285267	broad.mit.edu	37	3	40528914	40528914	+	Silent	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF676	163223	broad.mit.edu	37	19	22363099	22363099	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF676	163223	broad.mit.edu	37	19	22363099	22363099	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF683	257101	broad.mit.edu	37	1	26688417	26688417	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF683	257101	broad.mit.edu	37	1	26688417	26688417	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF737	100129842	broad.mit.edu	37	19	20727531	20727531	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF737	100129842	broad.mit.edu	37	19	20727531	20727531	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF738	148203	broad.mit.edu	37	19	21566506	21566506	+	3'UTR	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF738	148203	broad.mit.edu	37	19	21566506	21566506	+	3'UTR	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF804A	91752	broad.mit.edu	37	2	185802546	185802546	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF804A	91752	broad.mit.edu	37	2	185802546	185802546	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF823	55552	broad.mit.edu	37	19	11833104	11833104	+	Silent	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF823	55552	broad.mit.edu	37	19	11833104	11833104	+	Silent	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF831	128611	broad.mit.edu	37	20	57769634	57769634	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF831	128611	broad.mit.edu	37	20	57769634	57769634	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNFX1	57169	broad.mit.edu	37	20	47886335	47886335	+	Intron	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZP4	57829	broad.mit.edu	37	1	238051537	238051537	+	Intron	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZP4	57829	broad.mit.edu	37	1	238051537	238051537	+	Intron	SNP	G	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZPBP	11055	broad.mit.edu	37	7	50070835	50070835	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZPBP	11055	broad.mit.edu	37	7	50070835	50070835	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSWIM2	151112	broad.mit.edu	37	2	187693457	187693457	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSWIM2	151112	broad.mit.edu	37	2	187693457	187693457	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSWIM4	65249	broad.mit.edu	37	19	13941217	13941217	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSWIM4	65249	broad.mit.edu	37	19	13941217	13941217	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	119291099	119291099	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	58818053	58818053	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	80750640	80750640	+	5'UTR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	64407022	64407022	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	23098475	23098475	+	Intron	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32265061	32265061	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	5339392	5339392	+	Intron	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	16733818	16733818	+	3'UTR	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	20406464	20406464	+	RNA	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	21731267	21731267	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	43064728	43064728	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	143189532	143189532	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	133075578	133075578	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89476113	89476113	+	RNA	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	113950698	113950698	+	Intron	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	180538828	180538828	+	Intron	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	164028030	164028030	+	RNA	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	24171346	24171346	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	100549604	100549604	+	5'Flank	SNP	A	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	100552801	100552801	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142231492	142231492	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	38388878	38388878	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	90746187	90746187	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	51151312	51151312	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	119291099	119291099	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	58818053	58818053	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	80750640	80750640	+	5'UTR	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	64407022	64407022	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	23098475	23098475	+	Intron	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32265061	32265061	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	16733818	16733818	+	3'UTR	SNP	A	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	20406464	20406464	+	RNA	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	21731267	21731267	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	43064728	43064728	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	143189532	143189532	+	Intron	SNP	C	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	133075578	133075578	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89476113	89476113	+	RNA	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	113950698	113950698	+	Intron	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	180538828	180538828	+	Intron	SNP	A	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	17354001	17354001	+	RNA	SNP	T	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	24171346	24171346	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	100549604	100549604	+	5'Flank	SNP	A	C	C			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	100552801	100552801	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142124016	142124016	+	Intron	SNP	G	T	T			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142231492	142231492	+	Intron	SNP	C	G	G			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	38388878	38388878	+	Intron	SNP	G	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	90746187	90746187	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	51151312	51151312	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6777-01A-11D-1855-08	TCGA-44-6777-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
