Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ADAMTS15	170689	genome.wustl.edu	37	11	130318913	130318913	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0D3-01A-11D-A10Y-09	TCGA-A2-A0D3-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8183420e-7f44-4024-b3db-6b53ad293988	e23f0ac2-c466-4431-a23a-94bf6a1f5db6	11	130318913	130318913	C	T	SNP	ADAMTS15	NM_139055.2	human	genbank	58_37c	+1	reviewed	silent	c.45	p.T15	0.251	HMMPfam_Pep_M12B_propep	HMMPfam_TSP_1,HMMSmart_TSP1,superfamily_TSP1,HMMPfam_Reprolysin,PatternScan_CYSTEINE_SWITCH,HMMPfam_Pep_M12B_propep,PatternScan_ZINC_PROTEASE,HMMPfam_ADAM_spacer1,PatternScan_DISINTEGRIN_1,superfamily_SSF55486	-	no_errors
AHNAK2	113146	genome.wustl.edu	37	14	105417114	105417114	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0D3-01A-11D-A10Y-09	TCGA-A2-A0D3-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8183420e-7f44-4024-b3db-6b53ad293988	e23f0ac2-c466-4431-a23a-94bf6a1f5db6	14	105417114	105417114	G	A	SNP	AHNAK2	NM_138420.2	human	genbank	58_37c	-1	validated	silent	c.4674	p.D1558	0.000	NULL	HMMPfam_Involucrin,HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like	-	no_errors
BAI3	577	genome.wustl.edu	37	6	70070787	70070787	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0D3-01A-11D-A10Y-09	TCGA-A2-A0D3-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8183420e-7f44-4024-b3db-6b53ad293988	e23f0ac2-c466-4431-a23a-94bf6a1f5db6	6	70070787	70070787	C	T	SNP	BAI3	NM_001704.2	human	genbank	58_37c	+1	reviewed	nonsense	c.3622	p.R1208*	1.000	NULL	HMMPfam_GPS,HMMSmart_SM00303,HMMPfam_7tm_2,HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat,HMMPfam_HRM,HMMSmart_SM00008,PatternScan_G_PROTEIN_RECEP_F2_2	-	no_errors
C11orf45	219833	genome.wustl.edu	37	11	128772497	128772497	+	Silent	SNP	G	G	T	novel	unknown	TCGA-A2-A0D3-01A-11D-A10Y-09	TCGA-A2-A0D3-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8183420e-7f44-4024-b3db-6b53ad293988	e23f0ac2-c466-4431-a23a-94bf6a1f5db6	11	128772497	128772497	G	T	SNP	C11orf45	NM_145013.1	human	genbank	58_37c	-1	provisional	silent	c.393	p.G131	0.000	NULL	NULL	-	no_errors
C1orf129	80133	genome.wustl.edu	37	1	170955837	170955837	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A0D3-01A-11D-A10Y-09	TCGA-A2-A0D3-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8183420e-7f44-4024-b3db-6b53ad293988	e23f0ac2-c466-4431-a23a-94bf6a1f5db6	1	170955837	170955837	G	T	SNP	C1orf129	NM_025063.2	human	genbank	58_37c	+1	validated	nonsense	c.865	p.E289*	0.000	NULL	NULL	-	no_errors
CEP350	9857	genome.wustl.edu	37	1	180047624	180047624	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A0D3-01A-11D-A10Y-09	TCGA-A2-A0D3-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8183420e-7f44-4024-b3db-6b53ad293988	e23f0ac2-c466-4431-a23a-94bf6a1f5db6	1	180047624	180047624	G	T	SNP	CEP350	NM_014810.4	human	genbank	58_37c	+1	reviewed	missense	c.5794	p.V1932L	0.175	NULL	HMMPfam_CAP_GLY,PatternScan_CAP_GLY_1,superfamily_SSF74924	-	no_errors
CXCR1	0	genome.wustl.edu	37	2	219029099	219029099	+	Missense_Mutation	SNP	C	C	T	rs56030518	unknown	TCGA-A2-A0D3-01A-11D-A10Y-09	TCGA-A2-A0D3-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8183420e-7f44-4024-b3db-6b53ad293988	e23f0ac2-c466-4431-a23a-94bf6a1f5db6	2	219029099	219029099	C	T	SNP	CXCR1	NM_000634.2	human	genbank	58_37c	-1	reviewed	missense	c.836	p.R279H	0.974	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
DDX12	440081	genome.wustl.edu	37	12	9578178	9578178	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0D3-01A-11D-A10Y-09	TCGA-A2-A0D3-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8183420e-7f44-4024-b3db-6b53ad293988	e23f0ac2-c466-4431-a23a-94bf6a1f5db6	12	9578178	9578178	C	T	SNP	DDX12	ENST00000432996	human	ensembl	58_37c	-1	known	missense	c.1651	p.E551K	0.106	NULL	HMMSmart_SM00488,HMMSmart_SM00491,HMMPfam_DEAD_2,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
DNAJC2	27000	genome.wustl.edu	37	7	102960101	102960102	+	Frame_Shift_Del	DEL	GA	GA	-	novel	unknown	TCGA-A2-A0D3-01A-11D-A10Y-09	TCGA-A2-A0D3-10A-01D-A110-09	GA	GA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8183420e-7f44-4024-b3db-6b53ad293988	e23f0ac2-c466-4431-a23a-94bf6a1f5db6	7	102960101	102960102	GA	-	DEL	DNAJC2	NM_014377.1	human	genbank	58_37c	-1	reviewed	frame_shift_del	c.1197_1196	p.L399fs	0.979:1.000	NULL	HMMSmart_SM00717,HMMPfam_DnaJ,HMMSmart_SM00271,superfamily_Chaperone J-domain,superfamily_Homeodomain-like,HMMPfam_Myb_DNA-binding,PatternScan_DNAJ_1	-	no_errors
DUSP27	92235	genome.wustl.edu	37	1	167097767	167097767	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0D3-01A-11D-A10Y-09	TCGA-A2-A0D3-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8183420e-7f44-4024-b3db-6b53ad293988	e23f0ac2-c466-4431-a23a-94bf6a1f5db6	1	167097767	167097767	C	T	SNP	DUSP27	NM_001080426.1	human	genbank	58_37c	+1	provisional	silent	c.3399	p.D1133	0.253	NULL	HMMPfam_DSPc,PatternScan_TYR_PHOSPHATASE_1,HMMSmart_DSPc,superfamily_SSF52799	-	no_errors
ENSG00000245549	0	genome.wustl.edu	37	1	16950916	16950916	+	RNA	SNP	C	C	T	rs112496835	byCluster	TCGA-A2-A0D3-01A-11D-A10Y-09	TCGA-A2-A0D3-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8183420e-7f44-4024-b3db-6b53ad293988	e23f0ac2-c466-4431-a23a-94bf6a1f5db6	1	16950916	16950916	C	T	SNP	ENSG00000245549	ENST00000501442	human	ensembl	58_37c	+1	novel	rna	NULL	NULL	0.889	-	-	-	no_errors
EVI5	7813	genome.wustl.edu	37	1	93163492	93163492	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A2-A0D3-01A-11D-A10Y-09	TCGA-A2-A0D3-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8183420e-7f44-4024-b3db-6b53ad293988	e23f0ac2-c466-4431-a23a-94bf6a1f5db6	1	93163492	93163492	A	G	SNP	EVI5	NM_005665.4	human	genbank	58_37c	-1	validated	silent	c.822	p.Y274	1.000	HMMPfam_TBC,HMMSmart_SM00164,superfamily_Ypt/Rab-GAP domain of gyp1p	HMMPfam_TBC,HMMSmart_SM00164,superfamily_Ypt/Rab-GAP domain of gyp1p	-	no_errors
GATA3	2625	genome.wustl.edu	37	10	8111543	8111544	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-A2-A0D3-01A-11D-A10Y-09	TCGA-A2-A0D3-10A-01D-A110-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8183420e-7f44-4024-b3db-6b53ad293988	e23f0ac2-c466-4431-a23a-94bf6a1f5db6	10	8111543	8111544	-	T	INS	GATA3	NM_001002295.1	human	genbank	58_37c	+1	reviewed	frame_shift_ins	c.1032_1033	p.Y344fs	0.358:1.000	HMMPfam_GATA,HMMSmart_SM00401,superfamily_Glucocorticoid receptor-like (DNA-binding domain)	HMMPfam_GATA,HMMSmart_SM00401,PatternScan_GATA_ZN_FINGER_1,superfamily_Glucocorticoid receptor-like (DNA-binding domain)	-	no_errors
GOLSYN	55638	genome.wustl.edu	37	8	110588052	110588052	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A2-A0D3-01A-11D-A10Y-09	TCGA-A2-A0D3-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8183420e-7f44-4024-b3db-6b53ad293988	e23f0ac2-c466-4431-a23a-94bf6a1f5db6	8	110588052	110588052	A	C	SNP	SYBU	NM_001099744.1	human	genbank	58_37c	-1	validated	missense	c.1075	p.F359V	1.000	NULL	NULL	-	no_errors
GPHA2	170589	genome.wustl.edu	37	11	64702634	64702634	+	Silent	SNP	T	T	A	novel	unknown	TCGA-A2-A0D3-01A-11D-A10Y-09	TCGA-A2-A0D3-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8183420e-7f44-4024-b3db-6b53ad293988	e23f0ac2-c466-4431-a23a-94bf6a1f5db6	11	64702634	64702634	T	A	SNP	GPHA2	NM_130769.3	human	genbank	58_37c	-1	validated	silent	c.117	p.T39	0.103	NULL	PatternScan_GLYCO_HORMONE_ALPHA_1,PatternScan_GLYCO_HORMONE_ALPHA_2	-	no_errors
GRIA2	2891	genome.wustl.edu	37	4	158262491	158262491	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0D3-01A-11D-A10Y-09	TCGA-A2-A0D3-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8183420e-7f44-4024-b3db-6b53ad293988	e23f0ac2-c466-4431-a23a-94bf6a1f5db6	4	158262491	158262491	C	T	SNP	GRIA2	NM_000826.3	human	genbank	58_37c	+1	reviewed	silent	c.1920	p.N640	1.000	HMMPfam_Lig_chan,HMMSmart_PBPe,superfamily_SSF53850	HMMPfam_Lig_chan,HMMSmart_PBPe,HMMPfam_ANF_receptor,HMMPfam_Lig_chan-Glu_bd,superfamily_SSF53822,superfamily_SSF53850	-	no_errors
IL17B	27190	genome.wustl.edu	37	5	148756510	148756510	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0D3-01A-11D-A10Y-09	TCGA-A2-A0D3-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8183420e-7f44-4024-b3db-6b53ad293988	e23f0ac2-c466-4431-a23a-94bf6a1f5db6	5	148756510	148756510	G	A	SNP	IL17B	NM_014443.2	human	genbank	58_37c	-1	reviewed	missense	c.100	p.R34W	0.011	HMMPfam_IL17	HMMPfam_IL17,superfamily_SSF57501	-	no_errors
LTA4H	4048	genome.wustl.edu	37	12	96409430	96409430	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0D3-01A-11D-A10Y-09	TCGA-A2-A0D3-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8183420e-7f44-4024-b3db-6b53ad293988	e23f0ac2-c466-4431-a23a-94bf6a1f5db6	12	96409430	96409430	G	A	SNP	LTA4H	NM_000895.1	human	genbank	58_37c	-1	provisional	silent	c.990	p.C330	1.000	"HMMPfam_Peptidase_M1,superfamily_Metalloproteases (""zincins"") catalytic domain"	"HMMPfam_Peptidase_M1,HMMPfam_Leuk-A4-hydro_C,superfamily_ARM repeat,superfamily_Metalloproteases (""zincins"") catalytic domain,superfamily_Leukotriene A4 hydrolase N-terminal domain"	-	no_errors
MAGEC3	139081	genome.wustl.edu	37	X	140985038	140985038	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A2-A0D3-01A-11D-A10Y-09	TCGA-A2-A0D3-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8183420e-7f44-4024-b3db-6b53ad293988	e23f0ac2-c466-4431-a23a-94bf6a1f5db6	X	140985038	140985038	C	A	SNP	MAGEC3	NM_138702.1	human	genbank	58_37c	+1	reviewed	missense	c.1494	p.F498L	0.001	HMMPfam_MAGE	HMMPfam_MAGE	-	no_errors
MARCH4	57574	genome.wustl.edu	37	2	217234735	217234735	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0D3-01A-11D-A10Y-09	TCGA-A2-A0D3-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8183420e-7f44-4024-b3db-6b53ad293988	e23f0ac2-c466-4431-a23a-94bf6a1f5db6	2	217234735	217234735	G	A	SNP	MARCH4	NM_020814.2	human	genbank	58_37c	-1	validated	silent	c.249	p.G83	0.997	NULL	HMMSmart_RINGv,HMMPfam_zf-C3HC4	-	no_errors
MLL3	58508	genome.wustl.edu	37	7	152012381	152012381	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-A2-A0D3-01A-11D-A10Y-09	TCGA-A2-A0D3-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8183420e-7f44-4024-b3db-6b53ad293988	e23f0ac2-c466-4431-a23a-94bf6a1f5db6	7	152012381	152012381	G	-	DEL	MLL3	NM_170606.2	human	genbank	58_37c	-1	reviewed	frame_shift_del	c.432	p.L145fs	1.000	NULL	PatternScan_HMGI_Y,HMMPfam_HMG_box,HMMSmart_SM00398,HMMPfam_SET,HMMSmart_SM00317,HMMSmart_SM00184,HMMSmart_SM00249,HMMSmart_SM00508,HMMPfam_FYRN,HMMPfam_FYRC,superfamily_FYVE/PHD zinc finger,HMMPfam_AT_hook,HMMSmart_SM00542,HMMSmart_SM00541,PatternScan_ZF_PHD_1,HMMPfam_PHD,PatternScan_ATPASE_ALPHA_BETA,superfamily_SET domain	-	no_errors
MYH14	79784	genome.wustl.edu	37	19	50810349	50810349	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0D3-01A-11D-A10Y-09	TCGA-A2-A0D3-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8183420e-7f44-4024-b3db-6b53ad293988	e23f0ac2-c466-4431-a23a-94bf6a1f5db6	19	50810349	50810349	C	T	SNP	MYH14	NM_001077186.1	human	genbank	58_37c	+1	reviewed	missense	c.5623	p.R1875W	1.000	HMMPfam_Myosin_tail_1	HMMPfam_IQ,HMMSmart_SM00015,HMMPfam_Myosin_head,HMMSmart_SM00242,HMMPfam_Myosin_tail_1,HMMPfam_Myosin_N,superfamily_Prefoldin,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
NLRP3	114548	genome.wustl.edu	37	1	247588840	247588840	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0D3-01A-11D-A10Y-09	TCGA-A2-A0D3-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8183420e-7f44-4024-b3db-6b53ad293988	e23f0ac2-c466-4431-a23a-94bf6a1f5db6	1	247588840	247588840	C	T	SNP	NLRP3	NM_001079821.2	human	genbank	58_37c	+1	reviewed	nonsense	c.2095	p.R699*	0.000	NULL	HMMPfam_LRR_1,HMMSmart_LRR_RI,HMMPfam_PAAD_DAPIN,HMMPfam_NACHT,superfamily_DEATH_like,superfamily_SSF52047	-	no_errors
NOTCH2	4853	genome.wustl.edu	37	1	120458202	120458202	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0D3-01A-11D-A10Y-09	TCGA-A2-A0D3-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8183420e-7f44-4024-b3db-6b53ad293988	e23f0ac2-c466-4431-a23a-94bf6a1f5db6	1	120458202	120458202	G	A	SNP	NOTCH2	NM_024408.2	human	genbank	58_37c	-1	reviewed	silent	c.7143	p.G2381	0.943	NULL	PatternScan_ASX_HYDROXYL,HMMPfam_Notch,HMMSmart_NL,superfamily_Notch_region,HMMSmart_EGF_CA,HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK,HMMPfam_EGF,HMMSmart_EGF,HMMPfam_NOD,HMMPfam_NODP,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF_CA,PatternScan_EGF_CA,superfamily_SSF57196	-	no_errors
NRG1	3084	genome.wustl.edu	37	8	32613947	32613947	+	Missense_Mutation	SNP	G	G	A	rs141319283	byFrequency	TCGA-A2-A0D3-01A-11D-A10Y-09	TCGA-A2-A0D3-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8183420e-7f44-4024-b3db-6b53ad293988	e23f0ac2-c466-4431-a23a-94bf6a1f5db6	8	32613947	32613947	G	A	SNP	NRG1	NM_013956.3	human	genbank	58_37c	+1	reviewed	missense	c.845	p.R282H	1.000	HMMPfam_Neuregulin	HMMPfam_Neuregulin,HMMSmart_IGc2,HMMPfam_EGF,HMMSmart_EGF,PatternScan_EGF_1,HMMPfam_ig,superfamily_SSF48726,superfamily_SSF57196	-	no_errors
PIK3CA	0	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	A	G			TCGA-A2-A0D3-01A-11D-A10Y-09	TCGA-A2-A0D3-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8183420e-7f44-4024-b3db-6b53ad293988	e23f0ac2-c466-4431-a23a-94bf6a1f5db6	3	178952085	178952085	A	G	SNP	PIK3CA	NM_006218.2	human	genbank	58_37c	+1	reviewed	missense	c.3140	p.H1047R	1.000	HMMSmart_PI3Kc,superfamily_Kinase_like	HMMSmart_C2,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,HMMPfam_PI3Ka,HMMSmart_PI3Ka,HMMPfam_PI3K_C2,HMMSmart_PI3K_C2,HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_C2_CaLB,superfamily_Kinase_like,superfamily_ARM-type_fold,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2,superfamily_SSF54236	-	no_errors
PKNOX2	63876	genome.wustl.edu	37	11	125301239	125301239	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0D3-01A-11D-A10Y-09	TCGA-A2-A0D3-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8183420e-7f44-4024-b3db-6b53ad293988	e23f0ac2-c466-4431-a23a-94bf6a1f5db6	11	125301239	125301239	C	T	SNP	PKNOX2	NM_022062.2	human	genbank	58_37c	+1	validated	missense	c.1370	p.T457M	1.000	NULL	HMMPfam_Homeobox,HMMSmart_HOX,superfamily_Homeodomain_like,PatternScan_HOMEOBOX_1	-	no_errors
POLI	11201	genome.wustl.edu	37	18	51820754	51820754	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A2-A0D3-01A-11D-A10Y-09	TCGA-A2-A0D3-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8183420e-7f44-4024-b3db-6b53ad293988	e23f0ac2-c466-4431-a23a-94bf6a1f5db6	18	51820754	51820754	T	G	SNP	POLI	NM_007195.2	human	genbank	58_37c	+1	validated	missense	c.2140	p.Y714D	1.000	NULL	HMMPfam_IMS,superfamily_Lesion bypass DNA polymerase (Y-family) little finger domain,superfamily_DNA/RNA polymerases	-	no_errors
PTPRU	10076	genome.wustl.edu	37	1	29651722	29651722	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0D3-01A-11D-A10Y-09	TCGA-A2-A0D3-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8183420e-7f44-4024-b3db-6b53ad293988	e23f0ac2-c466-4431-a23a-94bf6a1f5db6	1	29651722	29651722	G	A	SNP	PTPRU	NM_005704.3	human	genbank	58_37c	+1	reviewed	missense	c.4162	p.G1388S	1.000	HMMPfam_Y_phosphatase,HMMSmart_SM00194,HMMSmart_SM00404,PatternScan_TYR_PHOSPHATASE_1,superfamily_(Phosphotyrosine protein) phosphatases II	HMMPfam_Y_phosphatase,HMMSmart_SM00194,HMMPfam_MAM,HMMSmart_SM00137,PatternScan_MAM_1,HMMSmart_SM00404,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,PatternScan_TYR_PHOSPHATASE_1,superfamily_Immunoglobulin,superfamily_(Phosphotyrosine protein) phosphatases II	-	no_errors
SLC13A1	6561	genome.wustl.edu	37	7	122768936	122768936	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0D3-01A-11D-A10Y-09	TCGA-A2-A0D3-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8183420e-7f44-4024-b3db-6b53ad293988	e23f0ac2-c466-4431-a23a-94bf6a1f5db6	7	122768936	122768936	G	A	SNP	SLC13A1	NM_022444.3	human	genbank	58_37c	-1	validated	missense	c.1096	p.P366S	1.000	HMMPfam_Na_sulph_symp	HMMPfam_Na_sulph_symp,PatternScan_NA_SULFATE	-	no_errors
SLC18A1	6570	genome.wustl.edu	37	8	20005189	20005189	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A2-A0D3-01A-11D-A10Y-09	TCGA-A2-A0D3-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8183420e-7f44-4024-b3db-6b53ad293988	e23f0ac2-c466-4431-a23a-94bf6a1f5db6	8	20005189	20005189	C	A	SNP	SLC18A1	NM_001135691.2	human	genbank	58_37c	-1	validated	missense	c.1255	p.D419Y	1.000	HMMPfam_MFS_1,superfamily_MFS_gen_substrate_transporter	HMMPfam_MFS_1,superfamily_MFS_gen_substrate_transporter	-	no_errors
TFIP11	24144	genome.wustl.edu	37	22	26895384	26895384	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0D3-01A-11D-A10Y-09	TCGA-A2-A0D3-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8183420e-7f44-4024-b3db-6b53ad293988	e23f0ac2-c466-4431-a23a-94bf6a1f5db6	22	26895384	26895384	C	T	SNP	TFIP11	NM_001008697.1	human	genbank	58_37c	-1	validated	missense	c.1015	p.D339N	0.996	NULL	HMMPfam_G-patch,HMMSmart_SM00443,HMMPfam_TFP11	-	no_errors
ZFP30	22835	genome.wustl.edu	37	19	38126198	38126205	+	Frame_Shift_Del	DEL	CATTCCTT	CATTCCTT	-	novel	unknown	TCGA-A2-A0D3-01A-11D-A10Y-09	TCGA-A2-A0D3-10A-01D-A110-09	CATTCCTT	CATTCCTT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8183420e-7f44-4024-b3db-6b53ad293988	e23f0ac2-c466-4431-a23a-94bf6a1f5db6	19	38126198	38126205	CATTCCTT	-	DEL	ZFP30	NM_014898.2	human	genbank	58_37c	-1	validated	frame_shift_del	c.1244_1237	p.K413fs	1.000:1.000:0.972:0.980:0.982:0.980:0.994:0.998	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
