Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ACCN1	0	genome.wustl.edu	37	17	32483404	32483404	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A7-A26J-01A-11D-A167-09	TCGA-A7-A26J-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	be2ca34f-5c15-4b38-a207-52df296a98ee	7e2e9858-0372-46bf-b46d-0f83d9ea87f6	17	32483404	32483404	C	T	SNP	ACCN1	NM_001094.4	human	genbank	58_37c	-1	reviewed	missense	c.148	p.V50M	1.000	HMMPfam_ASC	HMMPfam_ASC,PatternScan_ASC	-	overly_large_intron
ATXN3	0	genome.wustl.edu	37	14	92537386	92537388	+	In_Frame_Del	DEL	TTT	TTT	-	novel	unknown	TCGA-A7-A26J-01A-11D-A167-09	TCGA-A7-A26J-10A-01D-A167-09	TTT	TTT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	be2ca34f-5c15-4b38-a207-52df296a98ee	7e2e9858-0372-46bf-b46d-0f83d9ea87f6	14	92537386	92537388	TTT	-	DEL	ATXN3	NM_004993.5	human	genbank	58_37c	-1	reviewed	in_frame_del	c.884_882	p.K295in_frame_del	0.989:0.996:0.999	NULL	HMMPfam_UIM,HMMSmart_SM00726,HMMPfam_Josephin	-	no_errors
C20orf100	0	genome.wustl.edu	37	20	42683025	42683025	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A7-A26J-01A-11D-A167-09	TCGA-A7-A26J-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	be2ca34f-5c15-4b38-a207-52df296a98ee	7e2e9858-0372-46bf-b46d-0f83d9ea87f6	20	42683025	42683025	G	A	SNP	C20orf100	ENST00000372992	human	ensembl	58_37c	+1	known	missense	c.35	p.R12H	0.649	NULL	NULL	-	no_start_codon
COL5A2	0	genome.wustl.edu	37	2	189918668	189918668	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A7-A26J-01A-11D-A167-09	TCGA-A7-A26J-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	be2ca34f-5c15-4b38-a207-52df296a98ee	7e2e9858-0372-46bf-b46d-0f83d9ea87f6	2	189918668	189918668	G	C	SNP	COL5A2	NM_000393.3	human	genbank	58_37c	-1	reviewed	missense	c.2452	p.P818A	1.000	HMMPfam_Collagen	HMMPfam_COLFI,HMMSmart_COLFI,HMMPfam_VWC,HMMSmart_VWC,PatternScan_VWFC_1,HMMPfam_Collagen	-	no_errors
CPNE8	0	genome.wustl.edu	37	12	39079360	39079360	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A7-A26J-01A-11D-A167-09	TCGA-A7-A26J-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	be2ca34f-5c15-4b38-a207-52df296a98ee	7e2e9858-0372-46bf-b46d-0f83d9ea87f6	12	39079360	39079360	G	T	SNP	CPNE8	NM_153634.2	human	genbank	58_37c	-1	reviewed	nonsense	c.1203	p.Y401*	1.000	HMMSmart_VWA,HMMPfam_Copine,superfamily_SSF53300	HMMPfam_C2,HMMSmart_C2,HMMSmart_VWA,superfamily_C2_CaLB,HMMPfam_Copine,superfamily_SSF53300	-	no_errors
DEPDC5	0	genome.wustl.edu	37	22	32293469	32293469	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A7-A26J-01A-11D-A167-09	TCGA-A7-A26J-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	be2ca34f-5c15-4b38-a207-52df296a98ee	7e2e9858-0372-46bf-b46d-0f83d9ea87f6	22	32293469	32293469	T	A	SNP	DEPDC5	NM_014662.2	human	genbank	58_37c	+1	validated	missense	c.4112	p.V1371D	1.000	NULL	"HMMPfam_DEP,HMMSmart_SM00049,superfamily_""Winged helix"" DNA-binding domain"	-	no_errors
DLST	0	genome.wustl.edu	37	14	75352289	75352289	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A7-A26J-01A-11D-A167-09	TCGA-A7-A26J-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	be2ca34f-5c15-4b38-a207-52df296a98ee	7e2e9858-0372-46bf-b46d-0f83d9ea87f6	14	75352289	75352289	G	T	SNP	DLST	NM_001933.4	human	genbank	58_37c	+1	validated	missense	c.98	p.G33V	1.000	NULL	HMMPfam_Biotin_lipoyl,HMMPfam_2-oxoacid_dh,PatternScan_LIPOYL,superfamily_Single hybrid motif,superfamily_CoA-dependent acyltransferases	-	no_errors
DPP10	0	genome.wustl.edu	37	2	116101439	116101439	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A7-A26J-01A-11D-A167-09	TCGA-A7-A26J-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	be2ca34f-5c15-4b38-a207-52df296a98ee	7e2e9858-0372-46bf-b46d-0f83d9ea87f6	2	116101439	116101439	C	T	SNP	DPP10	ENST00000429914	human	ensembl	58_37c	+1	known	missense	c.86	p.S29F	1.000	NULL	NULL	-	no_errors
ENSG00000211459	0	genome.wustl.edu	37	MT	1575	1575	+	RNA	SNP	T	T	C	novel	unknown	TCGA-A7-A26J-01A-11D-A167-09	TCGA-A7-A26J-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	be2ca34f-5c15-4b38-a207-52df296a98ee	7e2e9858-0372-46bf-b46d-0f83d9ea87f6	MT	1575	1575	T	C	SNP	ENSG00000211459	ENST00000389680	human	ensembl	58_37c	+1	known	rna	NULL	NULL	NULL	-	-	-	no_errors
ENSG00000224343	0	genome.wustl.edu	37	6	160132740	160132740	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A7-A26J-01A-11D-A167-09	TCGA-A7-A26J-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	be2ca34f-5c15-4b38-a207-52df296a98ee	7e2e9858-0372-46bf-b46d-0f83d9ea87f6	6	160132740	160132740	G	A	SNP	ENSG00000224343	ENST00000442642	human	ensembl	58_37c	-1	known	silent	c.267	p.S89	0.000	NULL	NULL	-	no_start_codon
EYS	0	genome.wustl.edu	37	6	65303044	65303044	+	Silent	SNP	T	G	G	novel	unknown	TCGA-A7-A26J-01A-11D-A167-09	TCGA-A7-A26J-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	be2ca34f-5c15-4b38-a207-52df296a98ee	7e2e9858-0372-46bf-b46d-0f83d9ea87f6	6	65303044	65303044	T	G	SNP	EYS	NM_001142800.1	human	genbank	58_37c	-1	reviewed	silent	c.3843	p.I1281	0.000	superfamily_Concanavalin A-like lectins/glucanases	PatternScan_ASX_HYDROXYL,HMMSmart_SM00282,HMMSmart_SM00179,HMMPfam_EGF,HMMSmart_SM00181,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_2,PatternScan_EGF_1,PatternScan_EGF_2,PatternScan_EGF_CA,superfamily_EGF/Laminin	-	no_errors
FAM72B	0	genome.wustl.edu	37	1	120839839	120839839	+	Silent	SNP	T	T	C	rs530681	byCluster	TCGA-A7-A26J-01A-11D-A167-09	TCGA-A7-A26J-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	be2ca34f-5c15-4b38-a207-52df296a98ee	7e2e9858-0372-46bf-b46d-0f83d9ea87f6	1	120839839	120839839	T	C	SNP	FAM72B	NM_001100910.1	human	genbank	58_37c	+1	predicted	silent	c.6	p.S2	1.000	NULL	NULL	-	no_errors
FAM86B1	0	genome.wustl.edu	37	8	12044010	12044010	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A7-A26J-01A-11D-A167-09	TCGA-A7-A26J-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	be2ca34f-5c15-4b38-a207-52df296a98ee	7e2e9858-0372-46bf-b46d-0f83d9ea87f6	8	12044010	12044010	C	T	SNP	FAM86B1	NM_001083537.1	human	genbank	58_37c	-1	predicted	missense	c.491	p.R164Q	0.899	HMMPfam_Methyltransf_16,superfamily_S-adenosyl-L-methionine-dependent methyltransferases	HMMPfam_Methyltransf_16,superfamily_S-adenosyl-L-methionine-dependent methyltransferases	-	no_errors
FLNB	0	genome.wustl.edu	37	3	58084492	58084492	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A7-A26J-01A-11D-A167-09	TCGA-A7-A26J-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	be2ca34f-5c15-4b38-a207-52df296a98ee	7e2e9858-0372-46bf-b46d-0f83d9ea87f6	3	58084492	58084492	C	A	SNP	FLNB	NM_001457.3	human	genbank	58_37c	+1	reviewed	missense	c.1202	p.T401N	0.059	HMMSmart_IG_FLMN,superfamily_Ig_E-set,HMMPfam_Filamin	HMMSmart_IG_FLMN,PatternScan_ACTININ_1,PatternScan_ACTININ_2,HMMPfam_CH,HMMSmart_CH,superfamily_Ig_E-set,superfamily_Calponin-homology,HMMPfam_Filamin	-	no_errors
HIST1H3G	0	genome.wustl.edu	37	6	26271575	26271575	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A7-A26J-01A-11D-A167-09	TCGA-A7-A26J-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	be2ca34f-5c15-4b38-a207-52df296a98ee	7e2e9858-0372-46bf-b46d-0f83d9ea87f6	6	26271575	26271575	C	T	SNP	HIST1H3G	NM_003534.2	human	genbank	58_37c	-1	reviewed	missense	c.38	p.G13D	1.000	superfamily_Histone-fold	HMMSmart_SM00428,PatternScan_HISTONE_H3_1,PatternScan_HISTONE_H3_2,HMMPfam_Histone,superfamily_Histone-fold	-	no_errors
IL17RC	0	genome.wustl.edu	37	3	9959658	9959658	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A7-A26J-01A-11D-A167-09	TCGA-A7-A26J-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	be2ca34f-5c15-4b38-a207-52df296a98ee	7e2e9858-0372-46bf-b46d-0f83d9ea87f6	3	9959658	9959658	T	G	SNP	IL17RC	NM_153461.2	human	genbank	58_37c	+1	reviewed	missense	c.392	p.V131G	1.000	NULL	HMMPfam_SEFIR	-	no_errors
INPPL1	0	genome.wustl.edu	37	11	71946958	71946958	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-A7-A26J-01A-11D-A167-09	TCGA-A7-A26J-10A-01D-A167-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	be2ca34f-5c15-4b38-a207-52df296a98ee	7e2e9858-0372-46bf-b46d-0f83d9ea87f6	11	71946958	71946958	A	G	SNP	INPPL1	NM_001567.3	human	genbank	58_37c	+1	reviewed	missense	c.2807	p.E936G	1.000	NULL	HMMSmart_IPPc,HMMPfam_SH2,HMMSmart_SH2,HMMPfam_SAM_1,HMMSmart_SAM,HMMPfam_Exo_endo_phos,superfamily_Exo_endo_phos,superfamily_SAM_homology,superfamily_SSF55550	-	no_errors
LOC100289574	0	genome.wustl.edu	37	16	32190787	32190787	+	Missense_Mutation	SNP	T	T	C	rs62042697	unknown	TCGA-A7-A26J-01A-11D-A167-09	TCGA-A7-A26J-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	be2ca34f-5c15-4b38-a207-52df296a98ee	7e2e9858-0372-46bf-b46d-0f83d9ea87f6	16	32190787	32190787	T	C	SNP	LOC100289574	XM_002343438.1	human	genbank	58_37c	-1	model	missense	c.395	p.Q132R	0.879	NULL	NULL	-	no_errors
LOC644768	0	genome.wustl.edu	37	22	16957455	16957455	+	RNA	SNP	G	G	A	novel	unknown	TCGA-A7-A26J-01A-11D-A167-09	TCGA-A7-A26J-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	be2ca34f-5c15-4b38-a207-52df296a98ee	7e2e9858-0372-46bf-b46d-0f83d9ea87f6	22	16957455	16957455	G	A	SNP	LOC644768	XR_016834.2	human	genbank	58_37c	-1	model	rna	NULL	NULL	0.976	-	-	-	pseudogene
LOC729057	0	genome.wustl.edu	37	22	16123164	16123164	+	RNA	SNP	C	C	A	rs5746346	by2Hit2Allele	TCGA-A7-A26J-01A-11D-A167-09	TCGA-A7-A26J-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	be2ca34f-5c15-4b38-a207-52df296a98ee	7e2e9858-0372-46bf-b46d-0f83d9ea87f6	22	16123164	16123164	C	A	SNP	LOC729057	XR_042044.2	human	genbank	58_37c	+1	model	rna	NULL	NULL	1.000	-	-	-	no_errors
MS4A2	0	genome.wustl.edu	37	11	59861502	59861502	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A7-A26J-01A-11D-A167-09	TCGA-A7-A26J-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	be2ca34f-5c15-4b38-a207-52df296a98ee	7e2e9858-0372-46bf-b46d-0f83d9ea87f6	11	59861502	59861502	C	T	SNP	MS4A2	NM_000139.3	human	genbank	58_37c	+1	reviewed	silent	c.603	p.I201	0.001	HMMPfam_CD20	HMMPfam_CD20	-	no_errors
NR6A1	0	genome.wustl.edu	37	9	127285049	127285049	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A7-A26J-01A-11D-A167-09	TCGA-A7-A26J-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	be2ca34f-5c15-4b38-a207-52df296a98ee	7e2e9858-0372-46bf-b46d-0f83d9ea87f6	9	127285049	127285049	C	A	SNP	NR6A1	NM_033334.2	human	genbank	58_37c	-1	reviewed	nonsense	c.1378	p.E460*	1.000	HMMPfam_Hormone_recep,superfamily_Nuclear receptor ligand-binding domain	HMMPfam_Hormone_recep,HMMSmart_SM00430,HMMPfam_zf-C4,HMMSmart_SM00399,PatternScan_NUCLEAR_REC_DBD_1,superfamily_Nuclear receptor ligand-binding domain,superfamily_Glucocorticoid receptor-like (DNA-binding domain)	-	no_errors
OMA1	0	genome.wustl.edu	37	1	58946709	58946709	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A7-A26J-01A-11D-A167-09	TCGA-A7-A26J-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	be2ca34f-5c15-4b38-a207-52df296a98ee	7e2e9858-0372-46bf-b46d-0f83d9ea87f6	1	58946709	58946709	C	T	SNP	OMA1	NM_145243.3	human	genbank	58_37c	-1	provisional	missense	c.1503	p.M501I	0.414	NULL	HMMPfam_Peptidase_M48,PatternScan_ZINC_PROTEASE	-	no_errors
PCDH1	0	genome.wustl.edu	37	5	141244045	141244045	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A7-A26J-01A-11D-A167-09	TCGA-A7-A26J-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	be2ca34f-5c15-4b38-a207-52df296a98ee	7e2e9858-0372-46bf-b46d-0f83d9ea87f6	5	141244045	141244045	G	T	SNP	PCDH1	NM_032420.2	human	genbank	58_37c	-1	reviewed	nonsense	c.1851	p.Y617*	1.000	HMMPfam_Cadherin,superfamily_Cadherin	HMMPfam_Cadherin,HMMSmart_CA,PatternScan_CADHERIN_1,HMMPfam_Cadherin_2,HMMPfam_Protocadherin,superfamily_Cadherin,PatternScan_GREAB_2	-	no_errors
PRAMEF4	0	genome.wustl.edu	37	1	12939782	12939782	+	Silent	SNP	A	A	G	rs4579765	unknown	TCGA-A7-A26J-01A-11D-A167-09	TCGA-A7-A26J-10A-01D-A167-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	be2ca34f-5c15-4b38-a207-52df296a98ee	7e2e9858-0372-46bf-b46d-0f83d9ea87f6	1	12939782	12939782	A	G	SNP	PRAMEF4	NM_001009611.2	human	genbank	58_37c	-1	validated	silent	c.1020	p.L340	0.000	superfamily_SSF52047	superfamily_SSF52047	-	no_errors
PRKCQ	0	genome.wustl.edu	37	10	6528089	6528089	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A7-A26J-01A-11D-A167-09	TCGA-A7-A26J-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	be2ca34f-5c15-4b38-a207-52df296a98ee	7e2e9858-0372-46bf-b46d-0f83d9ea87f6	10	6528089	6528089	G	T	SNP	PRKCQ	ENST00000397178	human	ensembl	58_37c	-1	known	nonsense	c.126	p.C42*	1.000	HMMPfam_C1_1	HMMSmart_SM00133,HMMSmart_SM00219,HMMPfam_C1_1,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,HMMPfam_Pkinase_C	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region
PROK1	0	genome.wustl.edu	37	1	110996692	110996692	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-A7-A26J-01A-11D-A167-09	TCGA-A7-A26J-10A-01D-A167-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	be2ca34f-5c15-4b38-a207-52df296a98ee	7e2e9858-0372-46bf-b46d-0f83d9ea87f6	1	110996692	110996692	A	C	SNP	PROK1	NM_032414.2	human	genbank	58_37c	+1	validated	missense	c.182	p.H61P	1.000	HMMPfam_Prokineticin,superfamily_SSF57190	HMMPfam_Prokineticin,superfamily_SSF57190	-	no_errors
PTGIS	0	genome.wustl.edu	37	20	48124536	48124536	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A7-A26J-01A-11D-A167-09	TCGA-A7-A26J-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	be2ca34f-5c15-4b38-a207-52df296a98ee	7e2e9858-0372-46bf-b46d-0f83d9ea87f6	20	48124536	48124536	T	G	SNP	PTGIS	NM_000961.3	human	genbank	58_37c	-1	reviewed	missense	c.1424	p.E475A	0.015	HMMPfam_p450,superfamily_Cytochrome_P450	HMMPfam_p450,superfamily_Cytochrome_P450,PatternScan_CYTOCHROME_P450	-	no_errors
PTPRE	0	genome.wustl.edu	37	10	129845722	129845722	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A7-A26J-01A-11D-A167-09	TCGA-A7-A26J-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	be2ca34f-5c15-4b38-a207-52df296a98ee	7e2e9858-0372-46bf-b46d-0f83d9ea87f6	10	129845722	129845722	C	T	SNP	PTPRE	NM_006504.4	human	genbank	58_37c	+1	reviewed	missense	c.178	p.L60F	0.226	NULL	HMMPfam_Y_phosphatase,HMMSmart_SM00194,HMMSmart_SM00404,PatternScan_TYR_PHOSPHATASE_1,superfamily_(Phosphotyrosine protein) phosphatases II	-	no_errors
ROBO2	0	genome.wustl.edu	37	3	77611806	77611806	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A7-A26J-01A-11D-A167-09	TCGA-A7-A26J-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	be2ca34f-5c15-4b38-a207-52df296a98ee	7e2e9858-0372-46bf-b46d-0f83d9ea87f6	3	77611806	77611806	C	T	SNP	ROBO2	NM_002942.3	human	genbank	58_37c	+1	reviewed	missense	c.1442	p.S481F	1.000	HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin	HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,HMMPfam_I-set,superfamily_Immunoglobulin	-	no_errors
USP9X	0	genome.wustl.edu	37	X	41082490	41082490	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A7-A26J-01A-11D-A167-09	TCGA-A7-A26J-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	be2ca34f-5c15-4b38-a207-52df296a98ee	7e2e9858-0372-46bf-b46d-0f83d9ea87f6	X	41082490	41082490	C	G	SNP	USP9X	NM_001039590.2	human	genbank	58_37c	+1	reviewed	missense	c.6586	p.L2196V	1.000	NULL	HMMPfam_UCH,PatternScan_UCH_2_1,PatternScan_UCH_2_2,superfamily_Cysteine proteinases	-	no_errors
ZIC3	0	genome.wustl.edu	37	X	136652179	136652179	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A7-A26J-01A-11D-A167-09	TCGA-A7-A26J-10A-01D-A167-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	be2ca34f-5c15-4b38-a207-52df296a98ee	7e2e9858-0372-46bf-b46d-0f83d9ea87f6	X	136652179	136652179	A	C	SNP	ZIC3	NM_003413.3	human	genbank	58_37c	+1	reviewed	missense	c.1354	p.T452P	1.000	NULL	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
