Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ABCC5	10057	genome.wustl.edu	37	3	183685546	183685546	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A08I-01A-11W-A019-09	TCGA-A8-A08I-10A-01W-A021-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	4525400d-0a2c-4cc7-9c71-9ad6d9faf93f	7e92cfa5-68b6-4dd5-a911-b3a0f44a1635	3	183685546	183685546	C	T	SNP	ABCC5	NM_005688.2	human	genbank	58_37c	-1	reviewed	silent	c.1770	p.L590	1.000	HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_ABC_membrane,HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain,PatternScan_ABC_TRANSPORTER_1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
ATP1A4	480	genome.wustl.edu	37	1	160144375	160144375	+	Missense_Mutation	SNP	G	G	A	rs181284059	by1000genomes	TCGA-A8-A08I-01A-11W-A019-09	TCGA-A8-A08I-10A-01W-A021-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	4525400d-0a2c-4cc7-9c71-9ad6d9faf93f	7e92cfa5-68b6-4dd5-a911-b3a0f44a1635	1	160144375	160144375	G	A	SNP	ATP1A4	NM_144699.3	human	genbank	58_37c	+1	reviewed	missense	c.2149	p.V717I	1.000	HMMPfam_Hydrolase,superfamily_HAD-like,superfamily_Calcium ATPase transmembrane domain M	HMMPfam_Cation_ATPase_N,HMMPfam_Hydrolase,HMMPfam_Cation_ATPase_C,HMMPfam_E1-E2_ATPase,PatternScan_ATPASE_E1_E2,superfamily_HAD-like,superfamily_Calcium ATPase transduction domain A,superfamily_Metal cation-transporting ATPase ATP-binding domain N,superfamily_Calcium ATPase transmembrane domain M	-	no_errors
C11orf1	64776	genome.wustl.edu	37	11	111753281	111753281	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A08I-01A-11W-A019-09	TCGA-A8-A08I-10A-01W-A021-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	4525400d-0a2c-4cc7-9c71-9ad6d9faf93f	7e92cfa5-68b6-4dd5-a911-b3a0f44a1635	11	111753281	111753281	G	A	SNP	C11orf1	NM_022761.2	human	genbank	58_37c	+1	validated	missense	c.235	p.D79N	0.960	HMMPfam_DUF1143	HMMPfam_DUF1143	-	no_errors
C14orf25	319089	genome.wustl.edu	37	14	38293013	38293023	+	Frame_Shift_Del	DEL	TTTCTGGATGC	TTTCTGGATGC	-	novel	unknown	TCGA-A8-A08I-01A-11W-A019-09	TCGA-A8-A08I-10A-01W-A021-09	TTTCTGGATGC	TTTCTGGATGC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4525400d-0a2c-4cc7-9c71-9ad6d9faf93f	7e92cfa5-68b6-4dd5-a911-b3a0f44a1635	14	38293013	38293023	TTTCTGGATGC	-	DEL	C14orf25	XM_002343299.1	human	genbank	58_37c	+1	model	frame_shift_del	c.4009_4019	p.F1337fs	0.103:0.040:0.039:0.095:0.980:0.999:1.000:1.000:0.998:1.000:0.992	HMMSmart_SM00028,superfamily_TPR-like	HMMPfam_TPR_1,HMMSmart_SM00028,superfamily_TPR-like	-	no_errors
C2CD2	25966	genome.wustl.edu	37	21	43321826	43321826	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A08I-01A-11W-A019-09	TCGA-A8-A08I-10A-01W-A021-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	4525400d-0a2c-4cc7-9c71-9ad6d9faf93f	7e92cfa5-68b6-4dd5-a911-b3a0f44a1635	21	43321826	43321826	C	G	SNP	C2CD2	NM_015500.1	human	genbank	58_37c	-1	validated	missense	c.1465	p.A489P	1.000	NULL	HMMPfam_C2,HMMSmart_C2,superfamily_C2_CaLB	-	no_errors
C6orf97	80129	genome.wustl.edu	37	6	151859360	151859360	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A08I-01A-11W-A019-09	TCGA-A8-A08I-10A-01W-A021-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	4525400d-0a2c-4cc7-9c71-9ad6d9faf93f	7e92cfa5-68b6-4dd5-a911-b3a0f44a1635	6	151859360	151859360	G	C	SNP	C6orf97	NM_025059.3	human	genbank	58_37c	+1	validated	missense	c.367	p.E123Q	0.566	NULL	superfamily_Prefoldin	-	no_errors
ENSG00000247966	0	genome.wustl.edu	37	20	48699253	48699253	+	RNA	SNP	T	T	A	novel	unknown	TCGA-A8-A08I-01A-11W-A019-09	TCGA-A8-A08I-10A-01W-A021-09	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	4525400d-0a2c-4cc7-9c71-9ad6d9faf93f	7e92cfa5-68b6-4dd5-a911-b3a0f44a1635	20	48699253	48699253	T	A	SNP	UBE2V1	ENST00000396059	human	ensembl	58_37c	-1	known	5_prime_untranslated_region	c.-48699253	NULL	1.000	-	-	-	no_coding_region
FAM116A	201627	genome.wustl.edu	37	3	57616502	57616502	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A8-A08I-01A-11W-A019-09	TCGA-A8-A08I-10A-01W-A021-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	4525400d-0a2c-4cc7-9c71-9ad6d9faf93f	7e92cfa5-68b6-4dd5-a911-b3a0f44a1635	3	57616502	57616502	A	G	SNP	FAM116A	NM_152678.2	human	genbank	58_37c	-1	validated	missense	c.1457	p.L486P	1.000	HMMPfam_DUF1630	HMMPfam_DUF1630	-	no_errors
FAM154A	158297	genome.wustl.edu	37	9	18928791	18928791	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A08I-01A-11W-A019-09	TCGA-A8-A08I-10A-01W-A021-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	4525400d-0a2c-4cc7-9c71-9ad6d9faf93f	7e92cfa5-68b6-4dd5-a911-b3a0f44a1635	9	18928791	18928791	C	A	SNP	FAM154A	NM_153707.1	human	genbank	58_37c	-1	predicted	missense	c.684	p.R228S	0.877	NULL	NULL	-	no_errors
FBN1	2200	genome.wustl.edu	37	15	48719825	48719825	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A08I-01A-11W-A019-09	TCGA-A8-A08I-10A-01W-A021-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	4525400d-0a2c-4cc7-9c71-9ad6d9faf93f	7e92cfa5-68b6-4dd5-a911-b3a0f44a1635	15	48719825	48719825	C	T	SNP	FBN1	ENST00000389087	human	ensembl	58_37c	-1	known	missense	c.2909	p.R970K	0.999	NULL	PatternScan_ASX_HYDROXYL,HMMSmart_SM00179,HMMPfam_TB,superfamily_TB module/8-cys domain,HMMSmart_SM00181,PatternScan_ZINC_FINGER_C2H2_1,PatternScan_EGF_2,HMMPfam_EGF_CA,PatternScan_EGF_CA,superfamily_EGF/Laminin	-	no_errors
FILIP1L	11259	genome.wustl.edu	37	3	99569408	99569408	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A8-A08I-01A-11W-A019-09	TCGA-A8-A08I-10A-01W-A021-09	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	4525400d-0a2c-4cc7-9c71-9ad6d9faf93f	7e92cfa5-68b6-4dd5-a911-b3a0f44a1635	3	99569408	99569408	T	A	SNP	FILIP1L	NM_182909.2	human	genbank	58_37c	-1	validated	missense	c.1112	p.E371V	1.000	superfamily_Prefoldin,HMMPfam_CortBP2	superfamily_Prefoldin,HMMPfam_CortBP2	-	no_errors
GPC5	2262	genome.wustl.edu	37	13	92408591	92408591	+	Silent	SNP	A	A	C	novel	unknown	TCGA-A8-A08I-01A-11W-A019-09	TCGA-A8-A08I-10A-01W-A021-09	A	A	A	C	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	4525400d-0a2c-4cc7-9c71-9ad6d9faf93f	7e92cfa5-68b6-4dd5-a911-b3a0f44a1635	13	92408591	92408591	A	C	SNP	GPC5	NM_004466.4	human	genbank	58_37c	+1	reviewed	silent	c.1197	p.G399	0.900	HMMPfam_Glypican	HMMPfam_Glypican,PatternScan_GLYPICAN	-	no_errors
GUCY1A2	2977	genome.wustl.edu	37	11	106558322	106558322	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A08I-01A-11W-A019-09	TCGA-A8-A08I-10A-01W-A021-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	4525400d-0a2c-4cc7-9c71-9ad6d9faf93f	7e92cfa5-68b6-4dd5-a911-b3a0f44a1635	11	106558322	106558322	C	A	SNP	GUCY1A2	NM_000855.1	human	genbank	58_37c	-1	validated	missense	c.2152	p.V718F	1.000	NULL	HMMPfam_Guanylate_cyc,HMMSmart_SM00044,superfamily_Adenylyl and guanylyl cyclase catalytic domain,HMMPfam_HNOB,superfamily_H-NOX domain,HMMPfam_HNOBA,PatternScan_GUANYLATE_CYCLASE_1	-	no_errors
HECW2	57520	genome.wustl.edu	37	2	197081790	197081790	+	Missense_Mutation	SNP	C	C	T	rs143511416	unknown	TCGA-A8-A08I-01A-11W-A019-09	TCGA-A8-A08I-10A-01W-A021-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	4525400d-0a2c-4cc7-9c71-9ad6d9faf93f	7e92cfa5-68b6-4dd5-a911-b3a0f44a1635	2	197081790	197081790	C	T	SNP	HECW2	NM_020760.1	human	genbank	58_37c	-1	provisional	missense	c.4436	p.R1479Q	1.000	HMMPfam_HECT,HMMSmart_SM00119,superfamily_Hect E3 ligase catalytic domain	HMMPfam_C2,HMMSmart_SM00239,HMMPfam_HECT,HMMSmart_SM00119,superfamily_Hect E3 ligase catalytic domain,HMMPfam_WW,HMMSmart_SM00456,PatternScan_WW_DOMAIN_1,superfamily_WW domain,superfamily_C2 domain (Calcium/lipid-binding domain CaLB)	-	no_errors
HEPH	9843	genome.wustl.edu	37	X	65392232	65392232	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A08I-01A-11W-A019-09	TCGA-A8-A08I-10A-01W-A021-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	4525400d-0a2c-4cc7-9c71-9ad6d9faf93f	7e92cfa5-68b6-4dd5-a911-b3a0f44a1635	X	65392232	65392232	G	A	SNP	HEPH	NM_138737.3	human	genbank	58_37c	+1	reviewed	missense	c.212	p.R71Q	0.983	superfamily_Cupredoxins	HMMPfam_Cu-oxidase,PatternScan_MULTICOPPER_OXIDASE1,PatternScan_MULTICOPPER_OXIDASE2,superfamily_Cupredoxins,HMMPfam_Cu-oxidase_2,HMMPfam_Cu-oxidase_3	-	no_errors
HIST1H2AA	221613	genome.wustl.edu	37	6	25726475	25726475	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A8-A08I-01A-11W-A019-09	TCGA-A8-A08I-10A-01W-A021-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	4525400d-0a2c-4cc7-9c71-9ad6d9faf93f	7e92cfa5-68b6-4dd5-a911-b3a0f44a1635	6	25726475	25726475	A	G	SNP	HIST1H2AA	NM_170745.3	human	genbank	58_37c	-1	reviewed	missense	c.281	p.L94P	1.000	HMMSmart_H2A,superfamily_Histone-fold	HMMSmart_H2A,PatternScan_HISTONE_H2A,HMMPfam_Histone,superfamily_Histone-fold	-	no_errors
IFT88	8100	genome.wustl.edu	37	13	21172876	21172876	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A08I-01A-11W-A019-09	TCGA-A8-A08I-10A-01W-A021-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	4525400d-0a2c-4cc7-9c71-9ad6d9faf93f	7e92cfa5-68b6-4dd5-a911-b3a0f44a1635	13	21172876	21172876	G	A	SNP	IFT88	NM_175605.3	human	genbank	58_37c	+1	reviewed	silent	c.708	p.K236	1.000	HMMSmart_SM00028,superfamily_TPR-like	HMMPfam_TPR_1,HMMSmart_SM00671,HMMSmart_SM00028,superfamily_TPR-like	-	no_errors
KBTBD8	84541	genome.wustl.edu	37	3	67053690	67053690	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A08I-01A-11W-A019-09	TCGA-A8-A08I-10A-01W-A021-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	4525400d-0a2c-4cc7-9c71-9ad6d9faf93f	7e92cfa5-68b6-4dd5-a911-b3a0f44a1635	3	67053690	67053690	C	T	SNP	KBTBD8	NM_032505.2	human	genbank	58_37c	+1	validated	missense	c.221	p.S74L	1.000	HMMSmart_SM00225,superfamily_POZ domain,HMMPfam_BTB	HMMSmart_SM00225,HMMPfam_Kelch_1,HMMSmart_SM00612,superfamily_Galactose oxidase central domain,superfamily_POZ domain,HMMPfam_BACK,HMMPfam_BTB	-	no_errors
KCNH2	3757	genome.wustl.edu	37	7	150648151	150648151	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A08I-01A-11W-A019-09	TCGA-A8-A08I-10A-01W-A021-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	4525400d-0a2c-4cc7-9c71-9ad6d9faf93f	7e92cfa5-68b6-4dd5-a911-b3a0f44a1635	7	150648151	150648151	G	A	SNP	KCNH2	NM_000238.2	human	genbank	58_37c	-1	reviewed	missense	c.2003	p.S668L	1.000	superfamily_cAMP-binding domain-like,superfamily_Voltage-gated potassium channels	HMMPfam_cNMP_binding,HMMSmart_SM00100,HMMSmart_SM00086,HMMPfam_Ion_trans,HMMPfam_PAS,superfamily_cAMP-binding domain-like,superfamily_PYP-like sensor domain (PAS domain),superfamily_Voltage-gated potassium channels	-	no_errors
MAGI3	260425	genome.wustl.edu	37	1	114191882	114191882	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A08I-01A-11W-A019-09	TCGA-A8-A08I-10A-01W-A021-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	4525400d-0a2c-4cc7-9c71-9ad6d9faf93f	7e92cfa5-68b6-4dd5-a911-b3a0f44a1635	1	114191882	114191882	G	A	SNP	MAGI3	NM_001142782.1	human	genbank	58_37c	+1	validated	missense	c.2179	p.V727I	1.000	HMMPfam_PDZ,superfamily_PDZ	HMMPfam_WW,HMMSmart_WW,PatternScan_WW_DOMAIN_1,superfamily_WW_Rsp5_WWP,HMMPfam_PDZ,HMMSmart_PDZ,superfamily_PDZ,HMMPfam_Guanylate_kin,HMMSmart_GuKc,PatternScan_GLY_RADICAL_1,PatternScan_GUANYLATE_KINASE_1,superfamily_SSF52540	-	no_errors
MTUS2	0	genome.wustl.edu	37	13	29600553	29600553	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A08I-01A-11W-A019-09	TCGA-A8-A08I-10A-01W-A021-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	4525400d-0a2c-4cc7-9c71-9ad6d9faf93f	7e92cfa5-68b6-4dd5-a911-b3a0f44a1635	13	29600553	29600553	C	A	SNP	MTUS2	NM_001033602.2	human	genbank	58_37c	+1	validated	missense	c.1748	p.P583H	0.141	NULL	NULL	-	no_errors
MYO9B	4650	genome.wustl.edu	37	19	17313052	17313052	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-A8-A08I-01A-11W-A019-09	TCGA-A8-A08I-10A-01W-A021-09	C	C	C	-	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	4525400d-0a2c-4cc7-9c71-9ad6d9faf93f	7e92cfa5-68b6-4dd5-a911-b3a0f44a1635	19	17313052	17313052	C	-	DEL	MYO9B	NM_004145.3	human	genbank	58_37c	+1	reviewed	frame_shift_del	c.4776	p.Q1593fs	1.000	NULL	HMMPfam_IQ,HMMSmart_IQ,HMMPfam_RA,HMMSmart_RA,HMMPfam_RhoGAP,HMMSmart_RhoGAP,HMMPfam_Myosin_head,HMMSmart_MYSc,HMMPfam_C1_1,HMMSmart_C1,PatternScan_ZF_DAG_PE_1,superfamily_Rho_GAP,superfamily_SSF52540,superfamily_SSF57889	-	no_errors
NEK9	91754	genome.wustl.edu	37	14	75584015	75584015	+	Silent	SNP	T	T	C	novel	unknown	TCGA-A8-A08I-01A-11W-A019-09	TCGA-A8-A08I-10A-01W-A021-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	4525400d-0a2c-4cc7-9c71-9ad6d9faf93f	7e92cfa5-68b6-4dd5-a911-b3a0f44a1635	14	75584015	75584015	T	C	SNP	NEK9	NM_033116.4	human	genbank	58_37c	-1	validated	silent	c.645	p.P215	0.991	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase	HMMPfam_RCC1,PatternScan_RCC1_1,PatternScan_RCC1_2,HMMSmart_S_TKc,PatternScan_PROTEIN_KINASE_ST,superfamily_RCC1/BLIP-II,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
NHLRC2	374354	genome.wustl.edu	37	10	115661613	115661613	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A8-A08I-01A-11W-A019-09	TCGA-A8-A08I-10A-01W-A021-09	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	4525400d-0a2c-4cc7-9c71-9ad6d9faf93f	7e92cfa5-68b6-4dd5-a911-b3a0f44a1635	10	115661613	115661613	A	T	SNP	NHLRC2	NM_198514.2	human	genbank	58_37c	+1	provisional	missense	c.1328	p.D443V	1.000	superfamily_NHL repeat	HMMPfam_NHL,superfamily_Thioredoxin-like,superfamily_NHL repeat	-	no_errors
PCDH15	65217	genome.wustl.edu	37	10	55782835	55782835	+	Silent	SNP	G	G	T	novel	unknown	TCGA-A8-A08I-01A-11W-A019-09	TCGA-A8-A08I-10A-01W-A021-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	4525400d-0a2c-4cc7-9c71-9ad6d9faf93f	7e92cfa5-68b6-4dd5-a911-b3a0f44a1635	10	55782835	55782835	G	T	SNP	PCDH15	NM_001142763.1	human	genbank	58_37c	-1	reviewed	silent	c.2358	p.V786	0.084	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like	HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,superfamily_Cadherin-like	-	no_errors
PCDHAC2	56134	genome.wustl.edu	37	5	140346876	140346876	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A08I-01A-11W-A019-09	TCGA-A8-A08I-10A-01W-A021-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	4525400d-0a2c-4cc7-9c71-9ad6d9faf93f	7e92cfa5-68b6-4dd5-a911-b3a0f44a1635	5	140346876	140346876	C	T	SNP	PCDHAC2	NM_018899.5	human	genbank	58_37c	+1	reviewed	silent	c.525	p.P175	0.000	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like	HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin_2,superfamily_Cadherin-like	-	no_errors
RG9MTD2	93587	genome.wustl.edu	37	4	100479258	100479258	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A08I-01A-11W-A019-09	TCGA-A8-A08I-10A-01W-A021-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	4525400d-0a2c-4cc7-9c71-9ad6d9faf93f	7e92cfa5-68b6-4dd5-a911-b3a0f44a1635	4	100479258	100479258	C	T	SNP	RG9MTD2	NM_001134665.1	human	genbank	58_37c	-1	validated	missense	c.296	p.S99N	0.946	NULL	HMMPfam_tRNA_m1G_MT	-	no_errors
RYR1	6261	genome.wustl.edu	37	19	38976819	38976819	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A08I-01A-11W-A019-09	TCGA-A8-A08I-10A-01W-A021-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	4525400d-0a2c-4cc7-9c71-9ad6d9faf93f	7e92cfa5-68b6-4dd5-a911-b3a0f44a1635	19	38976819	38976819	C	G	SNP	RYR1	NM_000540.2	human	genbank	58_37c	+1	reviewed	missense	c.5524	p.L1842V	1.000	NULL	HMMPfam_RYDR_ITPR,HMMPfam_RyR,HMMPfam_MIR,superfamily_MIR domain (Pfam 02815),HMMPfam_SPRY,HMMPfam_Ion_trans,HMMPfam_RR_TM4-6,HMMPfam_RIH_assoc,HMMPfam_Ins145_P3_rec,HMMSmart_SM00472,HMMSmart_SM00449,superfamily_EF-hand	-	no_errors
SAGE1	55511	genome.wustl.edu	37	X	134991157	134991157	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A08I-01A-11W-A019-09	TCGA-A8-A08I-10A-01W-A021-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	4525400d-0a2c-4cc7-9c71-9ad6d9faf93f	7e92cfa5-68b6-4dd5-a911-b3a0f44a1635	X	134991157	134991157	G	A	SNP	SAGE1	NM_018666.2	human	genbank	58_37c	+1	reviewed	missense	c.1576	p.D526N	0.007	NULL	NULL	-	no_errors
SCN10A	6336	genome.wustl.edu	37	3	38739525	38739525	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A08I-01A-11W-A019-09	TCGA-A8-A08I-10A-01W-A021-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	4525400d-0a2c-4cc7-9c71-9ad6d9faf93f	7e92cfa5-68b6-4dd5-a911-b3a0f44a1635	3	38739525	38739525	G	A	SNP	SCN10A	NM_006514.2	human	genbank	58_37c	-1	validated	missense	c.5186	p.T1729M	0.996	superfamily_SSF81324	HMMPfam_Ion_trans,HMMPfam_Na_trans_assoc,superfamily_SSF81324	-	no_errors
SCN2A	6326	genome.wustl.edu	37	2	166152440	166152440	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A08I-01A-11W-A019-09	TCGA-A8-A08I-10A-01W-A021-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	4525400d-0a2c-4cc7-9c71-9ad6d9faf93f	7e92cfa5-68b6-4dd5-a911-b3a0f44a1635	2	166152440	166152440	G	A	SNP	SCN2A	NM_001040142.1	human	genbank	58_37c	+1	reviewed	missense	c.107	p.R36K	1.000	NULL	HMMPfam_IQ,HMMSmart_SM00015,HMMPfam_Ion_trans,HMMPfam_Na_trans_assoc,superfamily_Voltage-gated potassium channels	-	no_errors
SPTA1	6708	genome.wustl.edu	37	1	158636110	158636110	+	Missense_Mutation	SNP	C	C	T	rs145972324	by1000genomes	TCGA-A8-A08I-01A-11W-A019-09	TCGA-A8-A08I-10A-01W-A021-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	4525400d-0a2c-4cc7-9c71-9ad6d9faf93f	7e92cfa5-68b6-4dd5-a911-b3a0f44a1635	1	158636110	158636110	C	T	SNP	SPTA1	NM_003126.2	human	genbank	58_37c	-1	reviewed	missense	c.2216	p.R739H	0.995	HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_Spectrin repeat	HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain,HMMPfam_Spectrin,HMMPfam_efhand_Ca_insen,HMMSmart_SM00150,superfamily_Spectrin repeat,superfamily_EF-hand	-	no_errors
TNFRSF21	27242	genome.wustl.edu	37	6	47202423	47202423	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A08I-01A-11W-A019-09	TCGA-A8-A08I-10A-01W-A021-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	4525400d-0a2c-4cc7-9c71-9ad6d9faf93f	7e92cfa5-68b6-4dd5-a911-b3a0f44a1635	6	47202423	47202423	C	A	SNP	TNFRSF21	NM_014452.3	human	genbank	58_37c	-1	reviewed	missense	c.1721	p.G574V	1.000	NULL	HMMPfam_Death,HMMSmart_DEATH,HMMSmart_TNFR,PatternScan_TNFR_NGFR_1,superfamily_DEATH_like,superfamily_SSF57586	-	no_errors
TP53	7157	genome.wustl.edu	37	17	7578442	7578442	+	Missense_Mutation	SNP	T	T	C	rs148924904	unknown	TCGA-A8-A08I-01A-11W-A019-09	TCGA-A8-A08I-10A-01W-A021-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	4525400d-0a2c-4cc7-9c71-9ad6d9faf93f	7e92cfa5-68b6-4dd5-a911-b3a0f44a1635	17	7578442	7578442	T	C	SNP	TP53	NM_000546.4	human	genbank	58_37c	-1	reviewed	missense	c.488	p.Y163C	1.000	superfamily_p53-like transcription factors,HMMPfam_P53	PatternScan_P53,superfamily_p53-like transcription factors,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain,HMMPfam_P53,HMMPfam_P53_TAD	-	no_errors
USPL1	10208	genome.wustl.edu	37	13	31195310	31195310	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A08I-01A-11W-A019-09	TCGA-A8-A08I-10A-01W-A021-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	4525400d-0a2c-4cc7-9c71-9ad6d9faf93f	7e92cfa5-68b6-4dd5-a911-b3a0f44a1635	13	31195310	31195310	G	A	SNP	USPL1	NM_005800.4	human	genbank	58_37c	+1	validated	silent	c.33	p.L11	1.000	NULL	NULL	-	no_errors
WDR45L	56270	genome.wustl.edu	37	17	80585138	80585140	+	In_Frame_Del	DEL	TCT	TCT	-	novel	unknown	TCGA-A8-A08I-01A-11W-A019-09	TCGA-A8-A08I-10A-01W-A021-09	TCT	TCT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4525400d-0a2c-4cc7-9c71-9ad6d9faf93f	7e92cfa5-68b6-4dd5-a911-b3a0f44a1635	17	80585138	80585140	TCT	-	DEL	WDR45L	NM_019613.3	human	genbank	58_37c	-1	reviewed	in_frame_del	c.274_272	p.K91in_frame_del	1.000:1.000:1.000	superfamily_WD40 repeat-like	HMMSmart_SM00320,superfamily_WD40 repeat-like	-	no_errors
ZFPL1	7542	genome.wustl.edu	37	11	64855582	64855582	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A08I-01A-11W-A019-09	TCGA-A8-A08I-10A-01W-A021-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	4525400d-0a2c-4cc7-9c71-9ad6d9faf93f	7e92cfa5-68b6-4dd5-a911-b3a0f44a1635	11	64855582	64855582	C	T	SNP	ZFPL1	NM_006782.3	human	genbank	58_37c	+1	validated	missense	c.929	p.S310F	1.000	NULL	HMMSmart_RING,PatternScan_ZF_RING_1	-	no_errors
