Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
A2ML1	144568	genome.wustl.edu	37	12	9000231	9000231	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	12	9000231	9000231	G	A	SNP	A2ML1	NM_144670.3	human	genbank	58_37c	+1	validated	silent	c.1770	p.A590	0.000	HMMPfam_A2M_N_2	HMMPfam_A2M,HMMPfam_A2M_N,superfamily_Terpenoid cyclases/Protein prenyltransferases,HMMPfam_A2M_recep,superfamily_Alpha-macroglobulin receptor domain,HMMPfam_A2M_N_2,HMMPfam_A2M_comp,HMMPfam_Thiol-ester_cl,PatternScan_ALPHA_2_MACROGLOBULIN	-	no_errors
ABR	29	genome.wustl.edu	37	17	953786	953786	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	17	953786	953786	C	A	SNP	ABR	NM_021962.2	human	genbank	58_37c	-1	reviewed	missense	c.1650	p.K550N	0.996	HMMPfam_C2,HMMSmart_SM00239,superfamily_C2 domain (Calcium/lipid-binding domain CaLB)	HMMPfam_C2,HMMSmart_SM00239,HMMPfam_RhoGAP,HMMSmart_SM00324,HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_DBL homology domain (DH-domain),PatternScan_DH_1,HMMPfam_PH,HMMSmart_SM00233,superfamily_GTPase activation domain GAP,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),superfamily_PH domain-like	-	no_errors
ADAMTS16	170690	genome.wustl.edu	37	5	5186343	5186343	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	5	5186343	5186343	C	T	SNP	ADAMTS16	NM_139056.2	human	genbank	58_37c	+1	reviewed	silent	c.942	p.Y314	0.891	"HMMPfam_Reprolysin,superfamily_Metalloproteases (""zincins"") catalytic domain"	"HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat,HMMPfam_Reprolysin,HMMPfam_Pep_M12B_propep,PatternScan_CARBAMOYLTRANSFERASE,HMMPfam_ADAM_spacer1,HMMPfam_PLAC,superfamily_Metalloproteases (""zincins"") catalytic domain"	-	no_errors
AGFG2	3268	genome.wustl.edu	37	7	100151824	100151824	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	7	100151824	100151824	G	A	SNP	AGFG2	NM_006076.4	human	genbank	58_37c	+1	reviewed	missense	c.694	p.D232N	1.000	NULL	HMMPfam_ArfGap,HMMSmart_SM00105,superfamily_Pyk2-associated protein beta ARF-GAP domain	-	no_errors
AHRR	57491	genome.wustl.edu	37	5	428000	428000	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	5	428000	428000	C	T	SNP	AHRR	NM_020731.3	human	genbank	58_37c	+1	reviewed	missense	c.853	p.R285W	0.948	NULL	HMMSmart_SM00091,HMMPfam_HLH,HMMSmart_SM00353,HMMPfam_PAS,superfamily_PYP-like sensor domain (PAS domain)	-	no_errors
AMPD1	270	genome.wustl.edu	37	1	115226821	115226821	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	1	115226821	115226821	T	C	SNP	AMPD1	NM_000036.2	human	genbank	58_37c	-1	reviewed	silent	c.546	p.P182	1.000	NULL	HMMPfam_A_deaminase,PatternScan_A_DEAMINASE,superfamily_SSF51556	-	no_errors
APOB48R	55911	genome.wustl.edu	37	16	28507283	28507283	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	16	28507283	28507283	G	A	SNP	APOB48R	NM_018690.2	human	genbank	58_37c	+1	reviewed	silent	c.921	p.G307	0.000	NULL	NULL	-	no_errors
ATP6V0D2	245972	genome.wustl.edu	37	8	87165053	87165053	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	8	87165053	87165053	G	C	SNP	ATP6V0D2	NM_152565.1	human	genbank	58_37c	+1	validated	missense	c.900	p.M300I	1.000	HMMPfam_vATP-synt_AC39,superfamily_ATPase_V0/A0_c/d	HMMPfam_vATP-synt_AC39,superfamily_ATPase_V0/A0_c/d	-	no_errors
BAIAP2L1	55971	genome.wustl.edu	37	7	97984400	97984400	+	Silent	SNP	G	G	C	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	7	97984400	97984400	G	C	SNP	BAIAP2L1	NM_018842.4	human	genbank	58_37c	-1	reviewed	silent	c.168	p.A56	1.000	HMMPfam_IMD	HMMSmart_SH3,superfamily_SH3,HMMPfam_SH3_2,HMMPfam_IMD	-	no_errors
BCAN	63827	genome.wustl.edu	37	1	156622303	156622303	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	1	156622303	156622303	C	T	SNP	BCAN	NM_021948.3	human	genbank	58_37c	+1	validated	missense	c.1561	p.P521S	0.001	NULL	HMMPfam_Sushi,HMMSmart_SM00032,HMMPfam_Xlink,HMMSmart_SM00445,PatternScan_LINK_1,HMMPfam_Lectin_C,HMMSmart_SM00034,PatternScan_IG_MHC,HMMSmart_SM00406,HMMSmart_SM00409,HMMPfam_EGF,HMMSmart_SM00181,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_V-set,superfamily_Complement control module/SCR domain,superfamily_C-type lectin-like,PatternScan_C_TYPE_LECTIN_1,superfamily_Immunoglobulin,superfamily_EGF/Laminin	-	no_errors
BCR	613	genome.wustl.edu	37	22	23524047	23524047	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	22	23524047	23524047	G	C	SNP	BCR	NM_004327.3	human	genbank	58_37c	+1	reviewed	missense	c.900	p.Q300H	1.000	NULL	HMMPfam_C2,HMMSmart_SM00239,HMMPfam_RhoGAP,HMMSmart_SM00324,HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_DBL homology domain (DH-domain),PatternScan_DH_1,HMMSmart_SM00233,superfamily_GTPase activation domain GAP,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMPfam_Bcr-Abl_Oligo,superfamily_Bcr-Abl oncoprotein oligomerization domain,superfamily_PH domain-like	-	no_errors
BNC1	646	genome.wustl.edu	37	15	83926275	83926275	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	15	83926275	83926275	C	T	SNP	BNC1	NM_001717.3	human	genbank	58_37c	-1	reviewed	silent	c.2904	p.S968	0.308	HMMSmart_ZnF_C2H2	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2	-	no_errors
C15orf52	388115	genome.wustl.edu	37	15	40627724	40627724	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	15	40627724	40627724	C	G	SNP	C15orf52	NM_207380.2	human	genbank	58_37c	-1	validated	missense	c.1240	p.E414Q	0.000	NULL	NULL	-	no_errors
C6orf165	154313	genome.wustl.edu	37	6	88170826	88170826	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	6	88170826	88170826	G	A	SNP	C6orf165	NM_001031743.2	human	genbank	58_37c	+1	validated	silent	c.1581	p.T527	0.288	NULL	NULL	-	no_errors
C9orf91	203197	genome.wustl.edu	37	9	117405515	117405516	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	9	117405515	117405516	-	C	INS	C9orf91	NM_153045.3	human	genbank	58_37c	+1	validated	frame_shift_ins	c.951_952	p.R318fs	0.004:0.001	NULL	NULL	-	no_errors
C9orf93	203238	genome.wustl.edu	37	9	15744698	15744698	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	9	15744698	15744698	C	A	SNP	C9orf93	NM_173550.2	human	genbank	58_37c	+1	predicted	missense	c.2477	p.T826N	1.000	NULL	NULL	-	no_errors
CAMSAP1L1	23271	genome.wustl.edu	37	1	200816774	200816774	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	1	200816774	200816774	T	G	SNP	CAMSAP1L1	NM_203459.1	human	genbank	58_37c	+1	validated	missense	c.1199	p.I400S	1.000	NULL	superfamily_PRC-barrel domain,HMMPfam_DUF1781,superfamily_Calponin-homology domain CH-domain	-	no_errors
CBL	867	genome.wustl.edu	37	11	119103359	119103359	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	11	119103359	119103359	T	C	SNP	CBL	NM_005188.2	human	genbank	58_37c	+1	reviewed	missense	c.397	p.F133L	1.000	HMMPfam_Cbl_N,superfamily_Adaptor_Cbl_N	HMMPfam_UBA,HMMSmart_RING,HMMPfam_Cbl_N,superfamily_Adaptor_Cbl_N,HMMPfam_Cbl_N2,HMMPfam_Cbl_N3,HMMSmart_UBA,PatternScan_ZF_RING_1,HMMPfam_zf-C3HC4,superfamily_SSF47473,superfamily_SSF55550,superfamily_SSF57850	-	no_errors
CD5L	922	genome.wustl.edu	37	1	157805682	157805682	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	1	157805682	157805682	C	G	SNP	CD5L	NM_005894.2	human	genbank	58_37c	-1	validated	missense	c.319	p.E107Q	0.003	HMMPfam_SRCR,HMMSmart_SM00202,superfamily_SRCR-like	HMMPfam_SRCR,PatternScan_SRCR_1,HMMSmart_SM00202,superfamily_SRCR-like	-	no_errors
CNNM2	54805	genome.wustl.edu	37	10	104816684	104816684	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	10	104816684	104816684	G	A	SNP	CNNM2	NM_017649.3	human	genbank	58_37c	+1	validated	missense	c.2036	p.R679H	1.000	NULL	HMMPfam_CBS,HMMPfam_DUF21	-	no_errors
COLEC12	81035	genome.wustl.edu	37	18	357409	357409	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	18	357409	357409	C	A	SNP	COLEC12	NM_130386.2	human	genbank	58_37c	-1	validated	nonsense	c.172	p.G58*	1.000	NULL	HMMPfam_Lectin_C,HMMSmart_SM00034,HMMPfam_Collagen,superfamily_C-type lectin-like,PatternScan_C_TYPE_LECTIN_1	-	no_errors
CRAMP1L	57585	genome.wustl.edu	37	16	1724028	1724028	+	Silent	SNP	C	C	G	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	16	1724028	1724028	C	G	SNP	CRAMP1L	NM_020825.3	human	genbank	58_37c	+1	validated	silent	c.3792	p.V1264	0.000	NULL	HMMSmart_SANT	-	no_errors
CTDSP1	58190	genome.wustl.edu	37	2	219266840	219266840	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	2	219266840	219266840	C	T	SNP	CTDSP1	NM_021198.1	human	genbank	58_37c	+1	provisional	missense	c.223	p.P75S	1.000	NULL	HMMPfam_NIF,HMMSmart_CPDc,superfamily_SSF56784	-	no_errors
CYP2S1	29785	genome.wustl.edu	37	19	41704619	41704619	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	19	41704619	41704619	C	T	SNP	CYP2S1	NM_030622.6	human	genbank	58_37c	+1	reviewed	silent	c.660	p.Y220	0.025	HMMPfam_p450,superfamily_Cytochrome P450	HMMPfam_p450,superfamily_Cytochrome P450,PatternScan_CYTOCHROME_P450	-	no_errors
DDX58	23586	genome.wustl.edu	37	9	32481365	32481365	+	Silent	SNP	G	G	C	rs150568623	byCluster;byFrequency;by1000genomes	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	9	32481365	32481365	G	C	SNP	DDX58	NM_014314.3	human	genbank	58_37c	-1	reviewed	silent	c.1611	p.A537	0.003	superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_Helicase_C,HMMSmart_SM00490,HMMPfam_DEAD,HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
DDX58	23586	genome.wustl.edu	37	9	32481395	32481395	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	9	32481395	32481395	G	A	SNP	DDX58	NM_014314.3	human	genbank	58_37c	-1	reviewed	silent	c.1581	p.D527	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_Helicase_C,HMMSmart_SM00490,HMMPfam_DEAD,HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
DHRS13	147015	genome.wustl.edu	37	17	27228017	27228017	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	17	27228017	27228017	C	A	SNP	DHRS13	NM_144683.3	human	genbank	58_37c	-1	validated	missense	c.673	p.A225S	0.998	superfamily_NAD(P)-binding Rossmann-fold domains	HMMPfam_adh_short,superfamily_NAD(P)-binding Rossmann-fold domains	-	no_errors
DMD	1756	genome.wustl.edu	37	X	32364092	32364092	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	X	32364092	32364092	G	A	SNP	DMD	NM_004006.2	human	genbank	58_37c	-1	reviewed	nonsense	c.5554	p.Q1852*	1.000	HMMSmart_SM00150,superfamily_Spectrin repeat	HMMPfam_ZZ,HMMSmart_SM00291,PatternScan_ZF_ZZ_1,HMMPfam_WW,HMMSmart_SM00456,PatternScan_WW_DOMAIN_1,superfamily_WW domain,PatternScan_ACTININ_1,PatternScan_ACTININ_2,HMMPfam_CH,HMMSmart_SM00033,HMMPfam_Spectrin,superfamily_Prefoldin,superfamily_t-snare proteins,HMMPfam_efhand_1,HMMPfam_efhand_2,superfamily_Calponin-homology domain CH-domain,HMMSmart_SM00150,superfamily_Spectrin repeat,superfamily_EF-hand	-	no_errors
DNAH6	0	genome.wustl.edu	37	2	84940260	84940260	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	2	84940260	84940260	G	C	SNP	DNAH6	NM_001370.1	human	genbank	58_37c	+1	validated	missense	c.9420	p.L3140F	1.000	NULL	HMMSmart_SM00382,HMMPfam_Dynein_heavy,HMMPfam_AAA_5,HMMPfam_DHC_N2,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
DPP6	1804	genome.wustl.edu	37	7	154172083	154172083	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	7	154172083	154172083	G	T	SNP	DPP6	ENST00000377770	human	ensembl	58_37c	+1	known	missense	c.418	p.D140Y	0.988	superfamily_Dipeptidyl peptidase IV/CD26 N-terminal domain	HMMPfam_Peptidase_S9,HMMPfam_DPPIV_N,superfamily_alpha/beta-Hydrolases,superfamily_Dipeptidyl peptidase IV/CD26 N-terminal domain	-	no_errors
ELOVL5	60481	genome.wustl.edu	37	6	53139934	53139934	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	6	53139934	53139934	C	-	DEL	ELOVL5	NM_021814.3	human	genbank	58_37c	-1	provisional	frame_shift_del	c.450	p.M150fs	1.000	HMMPfam_ELO	HMMPfam_ELO,PatternScan_ELO	-	no_errors
ENSG00000210082	0	genome.wustl.edu	37	MT	2404	2404	+	RNA	SNP	T	C	C	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	MT	2404	2404	T	C	SNP	ENSG00000210082	ENST00000387347	human	ensembl	58_37c	+1	known	rna	NULL	NULL	NULL	-	-	-	no_errors
ENSG00000241241	0	genome.wustl.edu	37	17	39258148	39258148	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	17	39258148	39258148	T	G	SNP	ENSG00000241241	ENST00000440582	human	ensembl	58_37c	-1	known	missense	c.314	p.H105P	0.001	PatternScan_TNFR_NGFR_1,HMMPfam_Keratin_B2	PatternScan_TNFR_NGFR_1,HMMPfam_Keratin_B2	-	no_errors
ERG	2078	genome.wustl.edu	37	21	39817365	39817365	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	21	39817365	39817365	G	A	SNP	ERG	NM_001136154.1	human	genbank	58_37c	-1	validated	silent	c.219	p.I73	1.000	NULL	"HMMPfam_Ets,HMMSmart_SM00413,PatternScan_ETS_DOMAIN_1,PatternScan_ETS_DOMAIN_2,HMMPfam_SAM_PNT,HMMSmart_SM00251,superfamily_SAM/Pointed domain,superfamily_""Winged helix"" DNA-binding domain"	-	no_errors
EXOC6	54536	genome.wustl.edu	37	10	94688180	94688181	+	Splice_Site	INS	-	-	T	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	10	94688180	94688181	-	T	INS	EXOC6	NM_019053.4	human	genbank	58_37c	+1	reviewed	splice_site_ins	c.972+1_972+1	e9+1	1.000:1.000	-	-	-	no_errors
FLT3	2322	genome.wustl.edu	37	13	28602382	28602382	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	13	28602382	28602382	G	A	SNP	FLT3	NM_004119.2	human	genbank	58_37c	-1	reviewed	silent	c.1986	p.L662	1.000	HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,superfamily_Kinase_like	HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,PatternScan_RECEPTOR_TYR_KIN_III,PatternScan_PROTEIN_KINASE_TYR,superfamily_Kinase_like,HMMPfam_ig,PatternScan_PROTEIN_KINASE_ATP,superfamily_SSF48726	-	no_errors
GANAB	23193	genome.wustl.edu	37	11	62396294	62396294	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	11	62396294	62396294	G	A	SNP	GANAB	NM_198335.2	human	genbank	58_37c	-1	validated	silent	c.2193	p.P731	0.997	HMMPfam_Glyco_hydro_31	HMMPfam_Glyco_hydro_31,PatternScan_GLYCOSYL_HYDROL_F31_1,PatternScan_GLYCOSYL_HYDROL_F31_2	-	no_errors
GIMAP8	155038	genome.wustl.edu	37	7	150171135	150171135	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	7	150171135	150171135	G	A	SNP	GIMAP8	NM_175571.2	human	genbank	58_37c	+1	reviewed	missense	c.718	p.E240K	0.000	NULL	HMMPfam_AIG1,superfamily_SSF52540	-	no_errors
HEY2	23493	genome.wustl.edu	37	6	126080572	126080572	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	6	126080572	126080572	C	T	SNP	HEY2	NM_012259.2	human	genbank	58_37c	+1	reviewed	missense	c.638	p.S213F	0.910	NULL	HMMPfam_HLH,HMMSmart_HLH,HMMPfam_Hairy_orange,superfamily_HLH_basic,HMMSmart_ORANGE	-	no_errors
HSPC159	29094	genome.wustl.edu	37	2	64683480	64683480	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	2	64683480	64683480	G	A	SNP	HSPC159	NM_014181.2	human	genbank	58_37c	+1	validated	missense	c.256	p.E86K	1.000	HMMPfam_Gal-bind_lectin,HMMSmart_SM00276,superfamily_Concanavalin A-like lectins/glucanases	HMMPfam_Gal-bind_lectin,HMMSmart_SM00276,superfamily_Concanavalin A-like lectins/glucanases	-	no_errors
IREB2	3658	genome.wustl.edu	37	15	78757626	78757626	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	15	78757626	78757626	G	A	SNP	IREB2	NM_004136.2	human	genbank	58_37c	+1	validated	missense	c.306	p.M102I	1.000	superfamily_Aconitase iron-sulfur domain	HMMPfam_Aconitase_C,HMMPfam_Aconitase,superfamily_Aconitase iron-sulfur domain,superfamily_Aconitase,PatternScan_ACONITASE_1,PatternScan_ACONITASE_2	-	no_errors
IWS1	55677	genome.wustl.edu	37	2	128253598	128253598	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	2	128253598	128253598	G	A	SNP	IWS1	NM_017969.2	human	genbank	58_37c	-1	validated	silent	c.1692	p.I564	0.136	HMMPfam_IWS1_C	HMMPfam_IWS1_C	-	no_errors
KANK3	256949	genome.wustl.edu	37	19	8399296	8399296	+	Silent	SNP	G	G	C	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	19	8399296	8399296	G	C	SNP	KANK3	NM_198471.2	human	genbank	58_37c	-1	validated	silent	c.1335	p.L445	1.000	NULL	HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK	-	no_errors
KCNH8	131096	genome.wustl.edu	37	3	19575051	19575051	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	3	19575051	19575051	G	A	SNP	KCNH8	NM_144633.2	human	genbank	58_37c	+1	reviewed	nonsense	c.2784	p.W928*	1.000	NULL	HMMPfam_cNMP_binding,HMMSmart_cNMP,HMMSmart_PAC,HMMPfam_Ion_trans,HMMPfam_PAS,PatternScan_CNMP_BINDING_1,PatternScan_CNMP_BINDING_2,superfamily_cNMP_binding,superfamily_SSF55785,superfamily_SSF81324	-	no_errors
KCNN2	3781	genome.wustl.edu	37	5	113740533	113740533	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	5	113740533	113740533	G	A	SNP	KCNN2	NM_021614.2	human	genbank	58_37c	+1	reviewed	nonsense	c.981	p.W327*	1.000	HMMPfam_Ion_trans_2,superfamily_SSF81324	HMMPfam_CaMBD,superfamily_CaM_bd,HMMPfam_SK_channel,HMMPfam_Ion_trans_2,superfamily_SSF81324	-	no_errors
KIAA1715	80856	genome.wustl.edu	37	2	176857117	176857117	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	2	176857117	176857117	T	A	SNP	KIAA1715	NM_030650.1	human	genbank	58_37c	-1	validated	missense	c.99	p.E33D	0.997	NULL	HMMPfam_DUF2296	-	no_errors
KIF21B	23046	genome.wustl.edu	37	1	200973933	200973933	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	1	200973933	200973933	G	A	SNP	KIF21B	NM_017596.2	human	genbank	58_37c	-1	provisional	silent	c.861	p.G287	1.000	HMMPfam_Kinesin,HMMSmart_KISc,superfamily_SSF52540	HMMSmart_WD40,HMMPfam_Kinesin,HMMSmart_KISc,superfamily_Prefoldin,superfamily_WD40_like,PatternScan_WD_REPEATS_1,HMMPfam_WD40,PatternScan_KINESIN_MOTOR_DOMAIN1,superfamily_SSF52540	-	no_errors
KIF26B	55083	genome.wustl.edu	37	1	245850728	245850728	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	1	245850728	245850728	C	T	SNP	KIF26B	NM_018012.3	human	genbank	58_37c	+1	provisional	silent	c.4443	p.D1481	0.001	NULL	HMMPfam_Kinesin,HMMSmart_SM00129,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
KRTAP10-2	386679	genome.wustl.edu	37	21	45970680	45970680	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	21	45970680	45970680	G	C	SNP	KRTAP10-2	NM_198693.2	human	genbank	58_37c	-1	reviewed	missense	c.662	p.T221S	0.015	NULL	HMMPfam_Keratin_B2	-	no_errors
KRTAP10-7	386675	genome.wustl.edu	37	21	46020575	46020575	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	21	46020575	46020575	C	T	SNP	KRTAP10-7	ENST00000380102	human	ensembl	58_37c	+1	known	silent	c.54	p.R18	0.001	NULL	HMMPfam_Keratin_B2	-	no_errors
LEO1	123169	genome.wustl.edu	37	15	52244140	52244140	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	15	52244140	52244140	C	T	SNP	LEO1	NM_138792.2	human	genbank	58_37c	-1	provisional	missense	c.1512	p.M504I	1.000	HMMPfam_Leo1	HMMPfam_Leo1	-	no_errors
LOC100294345	0	genome.wustl.edu	37	17	1577384	1577384	+	Silent	SNP	C	T	T	rs7223681	byCluster;by1000genomes	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	17	1577384	1577384	C	T	SNP	LOC100294345	XM_002344073.1	human	genbank	58_37c	+1	model	silent	c.924	p.S308	0.439	NULL	NULL	-	no_start_codon:pseudogene:no_stop_codon
LPPR4	9890	genome.wustl.edu	37	1	99771528	99771528	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	1	99771528	99771528	G	A	SNP	LPPR4	NM_014839.4	human	genbank	58_37c	+1	reviewed	silent	c.1254	p.P418	0.000	NULL	HMMPfam_PAP2,HMMSmart_SM00014,superfamily_Acid phosphatase/Vanadium-dependent haloperoxidase	-	no_errors
LRP1	4035	genome.wustl.edu	37	12	57595392	57595392	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	12	57595392	57595392	C	T	SNP	LRP1	NM_002332.2	human	genbank	58_37c	+1	reviewed	silent	c.10458	p.P3486	0.001	HMMPfam_Ldl_recept_a,HMMSmart_SM00192,PatternScan_LDLRA_1,superfamily_LDL receptor-like module	HMMPfam_Ldl_recept_b,HMMSmart_SM00135,PatternScan_ASX_HYDROXYL,HMMSmart_SM00179,HMMPfam_Ldl_recept_a,HMMSmart_SM00192,PatternScan_LDLRA_1,superfamily_LDL receptor-like module,HMMPfam_EGF,HMMSmart_SM00181,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF_CA,PatternScan_EGF_CA,superfamily_EGF/Laminin,superfamily_YWTD domain	-	no_errors
MOS	4342	genome.wustl.edu	37	8	57026280	57026280	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	8	57026280	57026280	G	A	SNP	MOS	NM_005372.1	human	genbank	58_37c	-1	validated	nonsense	c.262	p.Q88*	1.000	superfamily_Kinase_like,HMMPfam_Pkinase	PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
MRPL51	51258	genome.wustl.edu	37	12	6602122	6602122	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	12	6602122	6602122	G	T	SNP	MRPL51	NM_016497.3	human	genbank	58_37c	-1	reviewed	silent	c.96	p.I32	0.000	NULL	HMMPfam_MRP-L51	-	no_errors
NEDD9	4739	genome.wustl.edu	37	6	11188468	11188468	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	6	11188468	11188468	G	A	SNP	NEDD9	NM_001142393.1	human	genbank	58_37c	-1	validated	nonsense	c.1978	p.Q660*	1.000	NULL	HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain,HMMPfam_Serine_rich	-	no_errors
NFASC	23114	genome.wustl.edu	37	1	204937936	204937937	+	Frame_Shift_Ins	INS	-	-	AT	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	1	204937936	204937937	-	AT	INS	NFASC	NM_015090.3	human	genbank	58_37c	+1	reviewed	frame_shift_ins	c.862_863	p.I289fs	1.000:1.000	HMMSmart_IGc2,HMMPfam_I-set,superfamily_SSF48726	HMMSmart_IGc2,HMMSmart_IG,HMMPfam_fn3,HMMSmart_FN3,superfamily_FN_III-like,HMMPfam_I-set,HMMPfam_ig,superfamily_SSF48726	-	no_errors
NHP2	55651	genome.wustl.edu	37	5	177576773	177576773	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	5	177576773	177576773	A	G	SNP	NHP2	NM_017838.3	human	genbank	58_37c	-1	reviewed	missense	c.403	p.Y135H	1.000	HMMPfam_Ribosomal_L7Ae,superfamily_SSF55315	PatternScan_RIBOSOMAL_L7AE,HMMPfam_Ribosomal_L7Ae,superfamily_SSF55315	-	no_errors
NR4A1	3164	genome.wustl.edu	37	12	52448565	52448565	+	Silent	SNP	C	C	G	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	12	52448565	52448565	C	G	SNP	NR4A1	NM_002135.3	human	genbank	58_37c	+1	reviewed	silent	c.453	p.L151	0.987	NULL	HMMPfam_Hormone_recep,HMMSmart_SM00430,HMMPfam_zf-C4,HMMSmart_SM00399,PatternScan_NUCLEAR_REC_DBD_1,superfamily_Nuclear receptor ligand-binding domain,superfamily_Glucocorticoid receptor-like (DNA-binding domain)	-	no_errors
OBSCN	84033	genome.wustl.edu	37	1	228547542	228547542	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	1	228547542	228547542	G	A	SNP	OBSCN	NM_052843.2	human	genbank	58_37c	+1	reviewed	missense	c.18949	p.G6317R	0.000	NULL	HMMPfam_IQ,HMMSmart_SM00015,HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_DBL homology domain (DH-domain),PatternScan_AA_TRNA_LIGASE_I,HMMPfam_PH,HMMSmart_SM00233,HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,HMMPfam_I-set,HMMPfam_V-set,HMMPfam_ig,superfamily_Immunoglobulin,superfamily_PH domain-like	-	no_errors
OR10H2	26538	genome.wustl.edu	37	19	15838899	15838899	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	19	15838899	15838899	G	A	SNP	OR10H2	NM_013939.2	human	genbank	58_37c	+1	validated	missense	c.46	p.G16S	0.326	superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
PCDHA9	9752	genome.wustl.edu	37	5	140228577	140228577	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	5	140228577	140228577	C	T	SNP	PCDHA9	NM_031857.1	human	genbank	58_37c	+1	reviewed	missense	c.497	p.A166V	0.980	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like	HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin_2,superfamily_Cadherin-like	-	no_errors
PDS5A	23244	genome.wustl.edu	37	4	39924337	39924337	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	4	39924337	39924337	T	C	SNP	PDS5A	NM_001100399.1	human	genbank	58_37c	-1	reviewed	missense	c.559	p.M187V	1.000	superfamily_ARM repeat	HMMPfam_HEAT,superfamily_ARM repeat	-	no_errors
PHLDA1	22822	genome.wustl.edu	37	12	76424354	76424354	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	12	76424354	76424354	C	G	SNP	PHLDA1	NM_007350.3	human	genbank	58_37c	-1	reviewed	missense	c.1168	p.G390R	1.000	NULL	HMMSmart_PH,superfamily_SSF50729	-	no_errors
PLA2G4A	5321	genome.wustl.edu	37	1	186880523	186880523	+	Splice_Site	SNP	T	T	A	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	1	186880523	186880523	T	A	SNP	PLA2G4A	NM_024420.2	human	genbank	58_37c	+1	reviewed	splice_site	c.558+2	e6+2	1.000	-	-	-	no_errors
PLCH1	23007	genome.wustl.edu	37	3	155303908	155303908	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	3	155303908	155303908	C	A	SNP	PLCH1	NM_001130960.1	human	genbank	58_37c	-1	validated	silent	c.510	p.L170	0.999	HMMSmart_SM00054,HMMPfam_efhand,superfamily_EF-hand	HMMPfam_C2,HMMSmart_SM00239,HMMPfam_PI-PLC-X,HMMSmart_SM00148,HMMPfam_PI-PLC-Y,HMMSmart_SM00149,HMMPfam_PH,HMMSmart_SM00233,HMMSmart_SM00054,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMPfam_efhand_like,superfamily_PLC-like phosphodiesterases,PatternScan_EF_HAND_1,HMMPfam_efhand,superfamily_EF-hand,superfamily_PH domain-like	-	no_errors
PLEKHM3	389072	genome.wustl.edu	37	2	208841408	208841408	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	2	208841408	208841408	G	A	SNP	PLEKHM3	NM_001080475.2	human	genbank	58_37c	-1	validated	nonsense	c.1513	p.R505*	1.000	NULL	HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like	-	no_errors
POU5F1	5460	genome.wustl.edu	37	6	31138107	31138107	+	Silent	SNP	G	G	A	rs148383986	byCluster;byFrequency;by1000genomes	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	6	31138107	31138107	G	A	SNP	POU5F1	NM_002701.4	human	genbank	58_37c	-1	reviewed	silent	c.291	p.G97	0.618	NULL	HMMPfam_Pou,HMMSmart_SM00352,PatternScan_POU_1,PatternScan_POU_2,HMMPfam_Homeobox,HMMSmart_SM00389,superfamily_Homeodomain-like,superfamily_lambda repressor-like DNA-binding domains,PatternScan_HOMEOBOX_1	-	no_errors
PRKAA2	5563	genome.wustl.edu	37	1	57169714	57169714	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	1	57169714	57169714	G	A	SNP	PRKAA2	NM_006252.3	human	genbank	58_37c	+1	validated	missense	c.859	p.V287I	0.949	superfamily_Kinase_like	HMMSmart_S_TKc,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
PTPRS	5802	genome.wustl.edu	37	19	5212055	5212055	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	19	5212055	5212055	C	T	SNP	PTPRS	NM_002850.3	human	genbank	58_37c	-1	reviewed	missense	c.4976	p.R1659H	1.000	superfamily_(Phosphotyrosine protein) phosphatases II	HMMPfam_Y_phosphatase,HMMSmart_SM00194,HMMSmart_SM00404,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,HMMPfam_I-set,HMMPfam_ig,PatternScan_TYR_PHOSPHATASE_1,superfamily_Immunoglobulin,superfamily_(Phosphotyrosine protein) phosphatases II	-	no_errors
RIN2	54453	genome.wustl.edu	37	20	19945639	19945639	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	20	19945639	19945639	C	G	SNP	RIN2	NM_018993.2	human	genbank	58_37c	+1	reviewed	missense	c.507	p.F169L	1.000	superfamily_SH2 domain	HMMPfam_RA,HMMSmart_SM00314,HMMPfam_VPS9,HMMSmart_SM00167,superfamily_VPS9 domain (Pfam 02204),superfamily_SH2 domain	-	no_errors
SGEF	26084	genome.wustl.edu	37	3	153943651	153943651	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	3	153943651	153943651	C	T	SNP	SGEF	NM_015595.3	human	genbank	58_37c	+1	validated	missense	c.1942	p.P648S	1.000	superfamily_PH domain-like	HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_DBL homology domain (DH-domain),HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain,HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like	-	no_errors
SHROOM2	357	genome.wustl.edu	37	X	9864432	9864433	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	X	9864432	9864433	-	C	INS	SHROOM2	NM_001649.2	human	genbank	58_37c	+1	reviewed	frame_shift_ins	c.2484_2485	p.R829fs	0.001:0.020	NULL	HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like,HMMPfam_ASD2,HMMPfam_ASD1	-	no_errors
SMTNL1	219537	genome.wustl.edu	37	11	57308982	57308982	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	11	57308982	57308982	C	A	SNP	SMTNL1	NM_001105565.1	human	genbank	58_37c	+1	provisional	missense	c.4	p.L2I	0.000	NULL	HMMPfam_CH,HMMSmart_SM00033,superfamily_Calponin-homology domain CH-domain	-	no_errors
SORCS1	114815	genome.wustl.edu	37	10	108339234	108339234	+	Splice_Site	SNP	T	T	G	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	10	108339234	108339234	T	G	SNP	SORCS1	NM_001013031.1	human	genbank	58_37c	-1	reviewed	splice_site	c.3266-2	e25-2	0.998	-	-	-	no_errors
SPARCL1	8404	genome.wustl.edu	37	4	88414874	88414874	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	4	88414874	88414874	C	T	SNP	SPARCL1	NM_001128310.1	human	genbank	58_37c	-1	validated	missense	c.1078	p.D360N	0.613	NULL	PatternScan_OSTEONECTIN_1,PatternScan_OSTEONECTIN_2,HMMPfam_Kazal_1,HMMSmart_SM00280,HMMSmart_SM00274,HMMPfam_FOLN,PatternScan_EF_HAND_1,HMMPfam_SPARC_Ca_bdg,superfamily_Kazal-type serine protease inhibitors,superfamily_EF-hand	-	no_errors
SSTR2	6752	genome.wustl.edu	37	17	71165918	71165918	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	17	71165918	71165918	A	G	SNP	SSTR2	NM_001050.2	human	genbank	58_37c	+1	reviewed	missense	c.460	p.R154G	1.000	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
ST20	0	genome.wustl.edu	37	15	80191306	80191306	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	15	80191306	80191306	C	A	SNP	ST20	NM_001100879.1	human	genbank	58_37c	-1	validated	silent	c.207	p.T69	0.000	NULL	NULL	-	no_errors
SYTL2	54843	genome.wustl.edu	37	11	85431982	85431982	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	11	85431982	85431982	G	C	SNP	SYTL2	NM_206927.2	human	genbank	58_37c	-1	reviewed	missense	c.2446	p.P816A	1.000	NULL	HMMPfam_C2,HMMSmart_SM00239,PatternScan_PHOSPHOPANTETHEINE,superfamily_C2 domain (Calcium/lipid-binding domain CaLB)	-	no_errors
TIMELESS	8914	genome.wustl.edu	37	12	56822802	56822802	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	12	56822802	56822802	C	T	SNP	TIMELESS	NM_003920.3	human	genbank	58_37c	-1	validated	missense	c.1169	p.R390Q	1.000	NULL	HMMPfam_TIMELESS,HMMPfam_TIMELESS_C	-	no_errors
TLE6	79816	genome.wustl.edu	37	19	2994071	2994071	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	19	2994071	2994071	C	T	SNP	TLE6	NM_001143986.1	human	genbank	58_37c	+1	validated	missense	c.1592	p.P531L	0.109	superfamily_WD40 repeat-like	HMMSmart_SM00320,superfamily_WD40 repeat-like	-	no_errors
TP53	7157	genome.wustl.edu	37	17	7578271	7578271	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	17	7578271	7578271	T	C	SNP	TP53	NM_000546.4	human	genbank	58_37c	-1	reviewed	missense	c.578	p.H193R	0.998	superfamily_p53-like transcription factors,HMMPfam_P53	PatternScan_P53,superfamily_p53-like transcription factors,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain,HMMPfam_P53,HMMPfam_P53_TAD	-	no_errors
TRAF6	7189	genome.wustl.edu	37	11	36511852	36511852	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	11	36511852	36511852	C	T	SNP	TRAF6	NM_004620.2	human	genbank	58_37c	-1	reviewed	missense	c.1105	p.E369K	1.000	HMMPfam_MATH,HMMSmart_MATH,superfamily_Traf_like	HMMPfam_zf-TRAF,HMMSmart_RING,HMMPfam_MATH,HMMSmart_MATH,superfamily_Traf_like,PatternScan_ZF_RING_1,HMMPfam_zf-C3HC4,superfamily_SSF57850	-	no_errors
TRBC1	0	genome.wustl.edu	37	7	142423558	142423558	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	7	142423558	142423558	G	A	SNP	TRBV27	ENST00000390399	human	ensembl	58_37c	+1	known	missense	c.214	p.E72K	0.000	HMMSmart_SM00406,HMMPfam_V-set,superfamily_Immunoglobulin	HMMSmart_SM00406,HMMPfam_V-set,superfamily_Immunoglobulin	-	no_stop_codon:bad_bp_length_for_coding_region
TRPC7	57113	genome.wustl.edu	37	5	135692897	135692897	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	5	135692897	135692897	C	T	SNP	TRPC7	ENST00000513104	human	ensembl	58_37c	-1	known	missense	c.179	p.R60Q	1.000	HMMSmart_ANK,superfamily_ANK	HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK,HMMPfam_Ion_trans,HMMPfam_TRP_2	-	no_errors
TRPV4	59341	genome.wustl.edu	37	12	110230552	110230552	+	Missense_Mutation	SNP	C	C	T	rs140535889	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	12	110230552	110230552	C	T	SNP	TRPV4	NM_021625.4	human	genbank	58_37c	-1	reviewed	missense	c.1729	p.V577M	0.998	HMMPfam_Ion_trans	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat,HMMPfam_Ion_trans	-	no_errors
TSLP	85480	genome.wustl.edu	37	5	110411704	110411704	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	5	110411704	110411704	C	A	SNP	TSLP	NM_033035.4	human	genbank	58_37c	+1	reviewed	missense	c.412	p.L138M	0.058	NULL	NULL	-	no_errors
TTC14	151613	genome.wustl.edu	37	3	180322642	180322642	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	3	180322642	180322642	G	A	SNP	TTC14	NM_133462.3	human	genbank	58_37c	+1	validated	missense	c.704	p.R235K	1.000	NULL	HMMPfam_TPR_1,superfamily_Nucleic acid-binding proteins,HMMSmart_SM00028,superfamily_TPR-like	-	no_errors
UBR5	51366	genome.wustl.edu	37	8	103298762	103298762	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	8	103298762	103298762	T	A	SNP	UBR5	NM_015902.4	human	genbank	58_37c	-1	reviewed	missense	c.5041	p.S1681C	1.000	NULL	HMMPfam_HECT,HMMSmart_HECTc,superfamily_HECT,HMMPfam_PABP,HMMSmart_PolyA,superfamily_PABP_HYD,HMMPfam_zf-UBR,HMMSmart_ZnF_UBR1	-	no_errors
USH2A	7399	genome.wustl.edu	37	1	216251659	216251659	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	1	216251659	216251659	G	A	SNP	USH2A	NM_206933.2	human	genbank	58_37c	-1	reviewed	missense	c.5344	p.L1782F	0.000	HMMSmart_SM00282,superfamily_Fibronectin type III,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_2	HMMSmart_SM00282,HMMPfam_Laminin_EGF,HMMSmart_SM00180,PatternScan_EGF_LAM_1,HMMPfam_fn3,HMMSmart_SM00060,HMMSmart_SM00560,HMMPfam_Laminin_N,HMMSmart_SM00136,superfamily_Fibronectin type III,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_2,PatternScan_EGF_1,superfamily_EGF/Laminin	-	no_errors
VGLL1	51442	genome.wustl.edu	37	X	135630756	135630756	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	X	135630756	135630756	A	T	SNP	VGLL1	NM_016267.3	human	genbank	58_37c	+1	reviewed	missense	c.223	p.M75L	0.043	NULL	HMMSmart_SM00711,HMMPfam_Vg_Tdu	-	no_errors
XKR5	389610	genome.wustl.edu	37	8	6668898	6668898	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	8	6668898	6668898	C	T	SNP	XKR5	ENST00000409172	human	ensembl	58_37c	-1	known	missense	c.1879	p.E627K	0.001	NULL	HMMPfam_XK-related	-	no_errors
ZFHX4	79776	genome.wustl.edu	37	8	77616630	77616630	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	8	77616630	77616630	G	A	SNP	ZFHX4	NM_024721.4	human	genbank	58_37c	+1	validated	missense	c.307	p.A103T	1.000	NULL	HMMPfam_Homeobox,HMMSmart_SM00389,HMMSmart_SM00451,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,superfamily_Homeodomain-like,HMMSmart_SM00355,PatternScan_HOMEOBOX_1,PatternScan_SOMATOTROPIN_2,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZFP106	64397	genome.wustl.edu	37	15	42734373	42734373	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	15	42734373	42734373	G	A	SNP	ZFP106	NM_022473.1	human	genbank	58_37c	-1	provisional	nonsense	c.3592	p.Q1198*	0.997	NULL	HMMSmart_WD40,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,superfamily_WD40_like,HMMSmart_ZnF_C2H2,HMMSmart_PQQ,PatternScan_WD_REPEATS_1,HMMPfam_WD40	-	no_errors
ZNF324	25799	genome.wustl.edu	37	19	58980577	58980577	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	19	58980577	58980577	T	C	SNP	ZNF324	NM_014347.1	human	genbank	58_37c	+1	provisional	missense	c.25	p.Y9H	1.000	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352)	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZNF85	7639	genome.wustl.edu	37	19	21131734	21131734	+	Silent	SNP	C	C	G	novel	unknown	TCGA-AN-A0FT-01A-11W-A050-09	TCGA-AN-A0FT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0598fc5f-9651-4ace-bf4e-56759d544e52	520abbc0-ff40-4a8e-b002-c36bac79cb72	19	21131734	21131734	C	G	SNP	ZNF85	NM_003429.3	human	genbank	58_37c	+1	validated	silent	c.414	p.L138	0.000	NULL	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),PatternScan_ZINC_PROTEASE,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
