Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ANKRD24	170961	genome.wustl.edu	37	19	4212477	4212477	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d77f59f7-8cff-41f3-a1bb-0de14524d4f4	5605aad9-7f20-4db3-9ed8-cae136f5773b	19	4212477	4212477	G	A	SNP	ANKRD24	NM_133475.1	human	genbank	58_37c	+1	provisional	silent	c.1065	p.P355	0.017	NULL	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat	-	no_errors
AP4E1	23431	genome.wustl.edu	37	15	51223146	51223146	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d77f59f7-8cff-41f3-a1bb-0de14524d4f4	5605aad9-7f20-4db3-9ed8-cae136f5773b	15	51223146	51223146	C	T	SNP	AP4E1	NM_007347.3	human	genbank	58_37c	+1	validated	missense	c.847	p.L283F	1.000	HMMPfam_Adaptin_N,superfamily_ARM-type_fold	HMMPfam_Adaptin_N,HMMPfam_Coatamer_beta_C,superfamily_ARM-type_fold	-	no_errors
ATG2B	55102	genome.wustl.edu	37	14	96773188	96773188	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d77f59f7-8cff-41f3-a1bb-0de14524d4f4	5605aad9-7f20-4db3-9ed8-cae136f5773b	14	96773188	96773188	C	T	SNP	ATG2B	NM_018036.5	human	genbank	58_37c	-1	validated	missense	c.4369	p.E1457K	1.000	NULL	HMMPfam_ATG_C	-	no_errors
CFP	5199	genome.wustl.edu	37	X	47485822	47485822	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d77f59f7-8cff-41f3-a1bb-0de14524d4f4	5605aad9-7f20-4db3-9ed8-cae136f5773b	X	47485822	47485822	C	T	SNP	CFP	NM_001145252.1	human	genbank	58_37c	-1	reviewed	missense	c.1037	p.R346H	0.467	HMMPfam_TSP_1,HMMSmart_TSP1,superfamily_TSP1	HMMPfam_TSP_1,HMMSmart_TSP1,superfamily_TSP1	-	no_errors
COG5	10466	genome.wustl.edu	37	7	106898812	106898812	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d77f59f7-8cff-41f3-a1bb-0de14524d4f4	5605aad9-7f20-4db3-9ed8-cae136f5773b	7	106898812	106898812	T	C	SNP	COG5	NM_006348.3	human	genbank	58_37c	-1	validated	missense	c.1685	p.D562G	1.000	NULL	HMMPfam_COG5	-	no_errors
COMP	1311	genome.wustl.edu	37	19	18898318	18898318	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d77f59f7-8cff-41f3-a1bb-0de14524d4f4	5605aad9-7f20-4db3-9ed8-cae136f5773b	19	18898318	18898318	C	T	SNP	COMP	NM_000095.2	human	genbank	58_37c	-1	reviewed	missense	c.1117	p.D373N	1.000	HMMPfam_TSP_3,superfamily_SSF103647	HMMSmart_EGF_CA,HMMPfam_TSP_3,HMMSmart_EGF,HMMPfam_TSP_C,superfamily_ConA_like_lec_gl,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF_CA,PatternScan_EGF_CA,superfamily_SSF103647,superfamily_SSF57196	-	no_errors
CUL7	9820	genome.wustl.edu	37	6	43005481	43005481	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d77f59f7-8cff-41f3-a1bb-0de14524d4f4	5605aad9-7f20-4db3-9ed8-cae136f5773b	6	43005481	43005481	C	T	SNP	CUL7	NM_014780.4	human	genbank	58_37c	-1	reviewed	missense	c.5042	p.R1681Q	0.931	NULL	HMMPfam_Cullin,HMMPfam_APC10,superfamily_Gal_bind_like,PatternScan_CULLIN_1,superfamily_Cullin_homology,superfamily_SSF46785	-	no_errors
DDX53	168400	genome.wustl.edu	37	X	23018195	23018195	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d77f59f7-8cff-41f3-a1bb-0de14524d4f4	5605aad9-7f20-4db3-9ed8-cae136f5773b	X	23018195	23018195	G	T	SNP	DDX53	NM_182699.2	human	genbank	58_37c	+1	validated	missense	c.21	p.E7D	0.004	NULL	PatternScan_DEAD_ATP_HELICASE,HMMPfam_Helicase_C,HMMSmart_HELICc,HMMSmart_KH,HMMPfam_DEAD,HMMSmart_DEXDc,HMMPfam_KH_1,superfamily_SSF52540,superfamily_SSF54791	-	no_errors
DMBT1	1755	genome.wustl.edu	37	10	124377690	124377690	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d77f59f7-8cff-41f3-a1bb-0de14524d4f4	5605aad9-7f20-4db3-9ed8-cae136f5773b	10	124377690	124377690	G	T	SNP	DMBT1	NM_007329.2	human	genbank	58_37c	+1	reviewed	missense	c.4662	p.W1554C	0.001	HMMPfam_SRCR,HMMSmart_SM00202,superfamily_SRCR-like	HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain,HMMPfam_SRCR,PatternScan_SRCR_1,HMMPfam_Zona_pellucida,HMMSmart_SM00241,HMMSmart_SM00202,superfamily_SRCR-like,PatternScan_ZP_1	-	no_errors
DNAH10	196385	genome.wustl.edu	37	12	124341720	124341720	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d77f59f7-8cff-41f3-a1bb-0de14524d4f4	5605aad9-7f20-4db3-9ed8-cae136f5773b	12	124341720	124341720	G	A	SNP	DNAH10	NM_207437.3	human	genbank	58_37c	+1	validated	missense	c.6202	p.V2068I	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMSmart_SM00382,HMMPfam_Dynein_heavy,HMMPfam_AAA_5,HMMPfam_DHC_N1,HMMPfam_DHC_N2,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
DOCK1	1793	genome.wustl.edu	37	10	128908590	128908590	+	Silent	SNP	C	C	T	rs35102871	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d77f59f7-8cff-41f3-a1bb-0de14524d4f4	5605aad9-7f20-4db3-9ed8-cae136f5773b	10	128908590	128908590	C	T	SNP	DOCK1	ENST00000398025	human	ensembl	58_37c	+1	known	silent	c.2532	p.I844	0.991	NULL	HMMPfam_SH3_1,HMMSmart_SH3,superfamily_SH3,superfamily_Cytochrome_c	-	no_errors
ENSG00000225705	0	genome.wustl.edu	37	7	48887568	48887568	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d77f59f7-8cff-41f3-a1bb-0de14524d4f4	5605aad9-7f20-4db3-9ed8-cae136f5773b	7	48887568	48887568	C	T	SNP	ENSG00000225705	ENST00000424687	human	ensembl	58_37c	-1	known	5_prime_untranslated_region	c.-48887568	NULL	0.233	-	-	-	no_coding_region:pseudogene
EPS15L1	58513	genome.wustl.edu	37	19	16514562	16514562	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d77f59f7-8cff-41f3-a1bb-0de14524d4f4	5605aad9-7f20-4db3-9ed8-cae136f5773b	19	16514562	16514562	C	T	SNP	EPS15L1	NM_021235.1	human	genbank	58_37c	-1	provisional	silent	c.1608	p.T536	0.049	NULL	HMMSmart_EH,HMMSmart_EFh,PatternScan_EF_HAND_1,HMMPfam_efhand,superfamily_SSF47473	-	no_errors
EVPL	2125	genome.wustl.edu	37	17	74004932	74004932	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d77f59f7-8cff-41f3-a1bb-0de14524d4f4	5605aad9-7f20-4db3-9ed8-cae136f5773b	17	74004932	74004932	G	A	SNP	EVPL	NM_001988.2	human	genbank	58_37c	-1	validated	missense	c.4354	p.R1452W	0.963	NULL	HMMPfam_Plectin,HMMSmart_SM00250,superfamily_Prefoldin,HMMSmart_SM00150,superfamily_Spectrin repeat,superfamily_Plakin repeat	-	no_errors
FAT3	120114	genome.wustl.edu	37	11	92616055	92616055	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d77f59f7-8cff-41f3-a1bb-0de14524d4f4	5605aad9-7f20-4db3-9ed8-cae136f5773b	11	92616055	92616055	G	A	SNP	FAT3	NM_001008781.2	human	genbank	58_37c	+1	validated	missense	c.12433	p.A4145T	1.000	NULL	PatternScan_ASX_HYDROXYL,HMMSmart_SM00282,HMMSmart_SM00179,HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_EGF,HMMSmart_SM00181,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_2,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_Cadherin-like,PatternScan_EGF_CA,superfamily_EGF/Laminin	-	no_errors
GPR114	221188	genome.wustl.edu	37	16	57597859	57597859	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d77f59f7-8cff-41f3-a1bb-0de14524d4f4	5605aad9-7f20-4db3-9ed8-cae136f5773b	16	57597859	57597859	T	A	SNP	GPR114	NM_153837.1	human	genbank	58_37c	+1	provisional	missense	c.397	p.C133S	1.000	NULL	HMMPfam_GPS,HMMSmart_SM00303,HMMPfam_7tm_2	-	no_errors
GRM1	2911	genome.wustl.edu	37	6	146480705	146480705	+	Missense_Mutation	SNP	G	G	A	rs112915383	byCluster;byFrequency;by1000genomes	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d77f59f7-8cff-41f3-a1bb-0de14524d4f4	5605aad9-7f20-4db3-9ed8-cae136f5773b	6	146480705	146480705	G	A	SNP	GRM1	NM_000838.3	human	genbank	58_37c	+1	reviewed	missense	c.922	p.V308I	0.977	HMMPfam_ANF_receptor,superfamily_SSF53822	HMMPfam_ANF_receptor,HMMPfam_NCD3G,HMMPfam_7tm_3,PatternScan_G_PROTEIN_RECEP_F3_1,PatternScan_G_PROTEIN_RECEP_F3_2,PatternScan_G_PROTEIN_RECEP_F3_3,HMMPfam_GluR_Homer-bdg,superfamily_SSF53822	-	no_errors
GRSF1	2926	genome.wustl.edu	37	4	71697363	71697363	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d77f59f7-8cff-41f3-a1bb-0de14524d4f4	5605aad9-7f20-4db3-9ed8-cae136f5773b	4	71697363	71697363	C	A	SNP	GRSF1	ENST00000514161	human	ensembl	58_37c	-1	known	nonstop	c.653	p.*218L	0.543	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region
HSPG2	3339	genome.wustl.edu	37	1	22174253	22174253	+	Missense_Mutation	SNP	C	C	T	rs190732238	by1000genomes	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d77f59f7-8cff-41f3-a1bb-0de14524d4f4	5605aad9-7f20-4db3-9ed8-cae136f5773b	1	22174253	22174253	C	T	SNP	HSPG2	ENST00000374695	human	ensembl	58_37c	-1	known	missense	c.7954	p.V2652M	0.717	HMMSmart_SM00408,HMMSmart_SM00409,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_ig,superfamily_Immunoglobulin	HMMPfam_Laminin_B,HMMPfam_SEA,HMMSmart_SM00200,HMMSmart_SM00282,HMMSmart_SM00179,HMMPfam_Laminin_EGF,HMMSmart_SM00180,PatternScan_EGF_LAM_1,HMMPfam_Ldl_recept_a,HMMSmart_SM00192,PatternScan_LDLRA_1,superfamily_LDL receptor-like module,HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_EGF,HMMSmart_SM00181,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_1,HMMPfam_Laminin_G_2,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_I-set,HMMPfam_V-set,HMMPfam_ig,HMMSmart_SM00281,superfamily_Immunoglobulin,superfamily_EGF/Laminin	-	no_errors
ISL1	3670	genome.wustl.edu	37	5	50689391	50689391	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d77f59f7-8cff-41f3-a1bb-0de14524d4f4	5605aad9-7f20-4db3-9ed8-cae136f5773b	5	50689391	50689391	T	C	SNP	ISL1	NM_002202.2	human	genbank	58_37c	+1	reviewed	missense	c.997	p.S333P	1.000	NULL	HMMPfam_Homeobox,HMMSmart_SM00389,HMMPfam_LIM,HMMSmart_SM00132,PatternScan_LIM_DOMAIN_1,superfamily_Homeodomain-like,PatternScan_HOMEOBOX_1,superfamily_Glucocorticoid receptor-like (DNA-binding domain)	-	no_errors
KRTAP19-6	337973	genome.wustl.edu	37	21	31914098	31914098	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d77f59f7-8cff-41f3-a1bb-0de14524d4f4	5605aad9-7f20-4db3-9ed8-cae136f5773b	21	31914098	31914098	C	T	SNP	KRTAP19-6	NM_181612.2	human	genbank	58_37c	-1	provisional	missense	c.55	p.G19S	0.000	NULL	NULL	-	no_errors
LOC100132686	0	genome.wustl.edu	37	11	112131428	112131428	+	RNA	SNP	C	C	G	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d77f59f7-8cff-41f3-a1bb-0de14524d4f4	5605aad9-7f20-4db3-9ed8-cae136f5773b	11	112131428	112131428	C	G	SNP	LOC100132686	XR_078450.1	human	genbank	58_37c	+1	model	rna	NULL	NULL	0.186	-	-	-	no_errors
LZTS1	11178	genome.wustl.edu	37	8	20112587	20112587	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d77f59f7-8cff-41f3-a1bb-0de14524d4f4	5605aad9-7f20-4db3-9ed8-cae136f5773b	8	20112587	20112587	G	A	SNP	LZTS1	NM_021020.2	human	genbank	58_37c	-1	reviewed	missense	c.106	p.R36W	0.385	NULL	HMMPfam_Fez1	-	no_errors
MAST4	23227	genome.wustl.edu	37	5	66438047	66438047	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d77f59f7-8cff-41f3-a1bb-0de14524d4f4	5605aad9-7f20-4db3-9ed8-cae136f5773b	5	66438047	66438047	G	A	SNP	MAST4	NM_015183.2	human	genbank	58_37c	+1	validated	missense	c.2032	p.D678N	1.000	HMMSmart_S_TK_X,superfamily_Kinase_like,HMMPfam_Pkinase_C	HMMSmart_S_TK_X,HMMPfam_PDZ,HMMSmart_PDZ,superfamily_PDZ,HMMSmart_S_TKc,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,HMMPfam_DUF1908,HMMPfam_Pkinase,HMMPfam_Pkinase_C	-	no_errors
MGAT4B	11282	genome.wustl.edu	37	5	179225212	179225212	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d77f59f7-8cff-41f3-a1bb-0de14524d4f4	5605aad9-7f20-4db3-9ed8-cae136f5773b	5	179225212	179225212	G	A	SNP	MGAT4B	NM_054013.3	human	genbank	58_37c	-1	reviewed	missense	c.1621	p.R541C	1.000	NULL	HMMPfam_Glyco_transf_54	-	no_errors
MYBBP1A	10514	genome.wustl.edu	37	17	4448343	4448343	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d77f59f7-8cff-41f3-a1bb-0de14524d4f4	5605aad9-7f20-4db3-9ed8-cae136f5773b	17	4448343	4448343	A	G	SNP	MYBBP1A	NM_001105538.1	human	genbank	58_37c	-1	validated	missense	c.2288	p.V763A	1.000	HMMPfam_DNA_pol_phi,superfamily_ARM-type_fold	HMMPfam_DNA_pol_phi,superfamily_ARM-type_fold	-	no_errors
MYBPC2	4606	genome.wustl.edu	37	19	50957393	50957393	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d77f59f7-8cff-41f3-a1bb-0de14524d4f4	5605aad9-7f20-4db3-9ed8-cae136f5773b	19	50957393	50957393	C	A	SNP	MYBPC2	NM_004533.3	human	genbank	58_37c	+1	validated	missense	c.1866	p.N622K	1.000	HMMSmart_IG,HMMPfam_I-set,superfamily_SSF48726	HMMSmart_IGc2,HMMSmart_IG,HMMPfam_fn3,HMMSmart_FN3,superfamily_FN_III-like,HMMPfam_I-set,superfamily_SSF48726	-	no_errors
N4BP2	55728	genome.wustl.edu	37	4	40104400	40104400	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d77f59f7-8cff-41f3-a1bb-0de14524d4f4	5605aad9-7f20-4db3-9ed8-cae136f5773b	4	40104400	40104400	C	T	SNP	N4BP2	NM_018177.3	human	genbank	58_37c	+1	reviewed	missense	c.935	p.T312I	0.000	NULL	HMMPfam_Smr,HMMSmart_SM00463,superfamily_UBA-like,HMMPfam_DUF1771,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
NELL2	4753	genome.wustl.edu	37	12	45105162	45105162	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d77f59f7-8cff-41f3-a1bb-0de14524d4f4	5605aad9-7f20-4db3-9ed8-cae136f5773b	12	45105162	45105162	G	A	SNP	NELL2	NM_001145107.1	human	genbank	58_37c	-1	reviewed	missense	c.1252	p.L418F	1.000	superfamily_ConA_like_lec_gl	PatternScan_ASX_HYDROXYL,HMMPfam_VWC,HMMSmart_VWC,PatternScan_VWFC_1,HMMSmart_LamG,HMMSmart_EGF_CA,HMMSmart_TSPN,HMMSmart_EGF,superfamily_ConA_like_lec_gl,HMMPfam_Laminin_G_2,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF_CA,HMMPfam_EGF_2,PatternScan_EGF_CA,superfamily_SSF57196	-	no_errors
OPRM1	4988	genome.wustl.edu	37	6	154412313	154412313	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d77f59f7-8cff-41f3-a1bb-0de14524d4f4	5605aad9-7f20-4db3-9ed8-cae136f5773b	6	154412313	154412313	G	T	SNP	OPRM1	NM_001145279.1	human	genbank	58_37c	+1	reviewed	silent	c.1149	p.V383	1.000	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
OR5D18	219438	genome.wustl.edu	37	11	55587367	55587367	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d77f59f7-8cff-41f3-a1bb-0de14524d4f4	5605aad9-7f20-4db3-9ed8-cae136f5773b	11	55587367	55587367	G	T	SNP	OR5D18	NM_001001952.1	human	genbank	58_37c	+1	provisional	missense	c.262	p.V88F	0.000	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
OR6C6	283365	genome.wustl.edu	37	12	55688683	55688683	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d77f59f7-8cff-41f3-a1bb-0de14524d4f4	5605aad9-7f20-4db3-9ed8-cae136f5773b	12	55688683	55688683	G	A	SNP	OR6C6	NM_001005493.1	human	genbank	58_37c	-1	provisional	missense	c.334	p.L112F	0.670	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
OS9	10956	genome.wustl.edu	37	12	58114298	58114298	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d77f59f7-8cff-41f3-a1bb-0de14524d4f4	5605aad9-7f20-4db3-9ed8-cae136f5773b	12	58114298	58114298	C	T	SNP	OS9	NM_006812.3	human	genbank	58_37c	+1	reviewed	silent	c.1875	p.I625	1.000	NULL	superfamily_Mannose 6-phosphate receptor domain,HMMPfam_PRKCSH	-	no_errors
PGM1	5236	genome.wustl.edu	37	1	64097433	64097433	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d77f59f7-8cff-41f3-a1bb-0de14524d4f4	5605aad9-7f20-4db3-9ed8-cae136f5773b	1	64097433	64097433	G	A	SNP	PGM1	NM_002633.2	human	genbank	58_37c	+1	reviewed	missense	c.662	p.R221H	1.000	HMMPfam_PGM_PMM_II,superfamily_Phosphoglucomutase first 3 domains	HMMPfam_PGM_PMM_IV,HMMPfam_PGM_PMM_I,HMMPfam_PGM_PMM_II,HMMPfam_PGM_PMM_III,superfamily_Phosphoglucomutase first 3 domains,PatternScan_PGM_PMM,superfamily_Phosphoglucomutase C-terminal domain	-	no_errors
PSMD4	5710	genome.wustl.edu	37	1	151239784	151239784	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d77f59f7-8cff-41f3-a1bb-0de14524d4f4	5605aad9-7f20-4db3-9ed8-cae136f5773b	1	151239784	151239784	G	A	SNP	PSMD4	NM_002810.2	human	genbank	58_37c	+1	reviewed	missense	c.1099	p.G367S	0.821	NULL	HMMSmart_SM00327,HMMPfam_UIM,HMMSmart_SM00726,superfamily_vWA-like	-	no_errors
PTPRD	5789	genome.wustl.edu	37	9	8504363	8504363	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d77f59f7-8cff-41f3-a1bb-0de14524d4f4	5605aad9-7f20-4db3-9ed8-cae136f5773b	9	8504363	8504363	C	A	SNP	PTPRD	NM_002839.3	human	genbank	58_37c	-1	reviewed	nonsense	c.1720	p.G574*	1.000	HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III	HMMPfam_Y_phosphatase,HMMSmart_SM00194,HMMSmart_SM00404,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,HMMPfam_I-set,HMMPfam_ig,PatternScan_TYR_PHOSPHATASE_1,superfamily_Immunoglobulin,superfamily_(Phosphotyrosine protein) phosphatases II	-	no_errors
SEPHS2	22928	genome.wustl.edu	37	16	30455839	30455839	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d77f59f7-8cff-41f3-a1bb-0de14524d4f4	5605aad9-7f20-4db3-9ed8-cae136f5773b	16	30455839	30455839	C	T	SNP	SEPHS2	ENST00000418751	human	ensembl	58_37c	-1	known	missense	c.856	p.V286I	1.000	HMMPfam_AIRS_C,superfamily_AIR_synth_C	HMMPfam_AIRS,HMMPfam_AIRS_C,superfamily_AIR_synth_C,superfamily_PurM_N-like	-	no_errors
SGPL1	8879	genome.wustl.edu	37	10	72604349	72604349	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d77f59f7-8cff-41f3-a1bb-0de14524d4f4	5605aad9-7f20-4db3-9ed8-cae136f5773b	10	72604349	72604349	G	A	SNP	SGPL1	NM_003901.3	human	genbank	58_37c	+1	validated	nonsense	c.147	p.W49*	0.996	NULL	HMMPfam_Pyridoxal_deC,superfamily_PLP-dependent transferases	-	no_errors
SLC32A1	140679	genome.wustl.edu	37	20	37356319	37356319	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d77f59f7-8cff-41f3-a1bb-0de14524d4f4	5605aad9-7f20-4db3-9ed8-cae136f5773b	20	37356319	37356319	G	A	SNP	SLC32A1	NM_080552.2	human	genbank	58_37c	+1	reviewed	silent	c.615	p.V205	1.000	HMMPfam_Aa_trans	HMMPfam_Aa_trans	-	no_errors
SLCO3A1	28232	genome.wustl.edu	37	15	92671615	92671615	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d77f59f7-8cff-41f3-a1bb-0de14524d4f4	5605aad9-7f20-4db3-9ed8-cae136f5773b	15	92671615	92671615	C	T	SNP	SLCO3A1	NM_013272.3	human	genbank	58_37c	+1	validated	missense	c.1408	p.P470S	0.001	HMMPfam_OATP,HMMPfam_Kazal_2,superfamily_MFS general substrate transporter,superfamily_Kazal-type serine protease inhibitors	HMMPfam_OATP,HMMPfam_Kazal_2,superfamily_MFS general substrate transporter,superfamily_Kazal-type serine protease inhibitors	-	no_errors
TFRC	7037	genome.wustl.edu	37	3	195787076	195787076	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d77f59f7-8cff-41f3-a1bb-0de14524d4f4	5605aad9-7f20-4db3-9ed8-cae136f5773b	3	195787076	195787076	G	A	SNP	TFRC	NM_001128148.1	human	genbank	58_37c	-1	validated	missense	c.1511	p.T504M	0.008	superfamily_Zn-dependent exopeptidases	HMMPfam_PA,HMMPfam_TFR_dimer,superfamily_Transferrin receptor ectodomain C-terminal domain,superfamily_Transferrin receptor ectodomain apical domain,superfamily_Zn-dependent exopeptidases	-	no_errors
TMC2	117532	genome.wustl.edu	37	20	2596835	2596835	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d77f59f7-8cff-41f3-a1bb-0de14524d4f4	5605aad9-7f20-4db3-9ed8-cae136f5773b	20	2596835	2596835	A	G	SNP	TMC2	NM_080751.2	human	genbank	58_37c	+1	validated	missense	c.1925	p.N642S	1.000	HMMPfam_TMC	HMMPfam_TMC	-	no_errors
TRIB2	28951	genome.wustl.edu	37	2	12880596	12880596	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d77f59f7-8cff-41f3-a1bb-0de14524d4f4	5605aad9-7f20-4db3-9ed8-cae136f5773b	2	12880596	12880596	C	T	SNP	TRIB2	NM_021643.3	human	genbank	58_37c	+1	reviewed	silent	c.708	p.D236	1.000	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase	-	no_errors
VNN2	8875	genome.wustl.edu	37	6	133072390	133072390	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d77f59f7-8cff-41f3-a1bb-0de14524d4f4	5605aad9-7f20-4db3-9ed8-cae136f5773b	6	133072390	133072390	A	T	SNP	VNN2	NM_004665.2	human	genbank	58_37c	-1	reviewed	missense	c.1094	p.L365H	0.954	NULL	HMMPfam_CN_hydrolase,superfamily_Ntlse/CNhydtse	-	no_errors
ZNF658	26149	genome.wustl.edu	37	9	40773302	40773302	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d77f59f7-8cff-41f3-a1bb-0de14524d4f4	5605aad9-7f20-4db3-9ed8-cae136f5773b	9	40773302	40773302	T	C	SNP	ZNF658	NM_033160.5	human	genbank	58_37c	-1	validated	missense	c.1973	p.Y658C	0.339	HMMPfam_zf-C2H2,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZNF680	340252	genome.wustl.edu	37	7	63982642	63982642	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d77f59f7-8cff-41f3-a1bb-0de14524d4f4	5605aad9-7f20-4db3-9ed8-cae136f5773b	7	63982642	63982642	G	T	SNP	ZNF680	NM_178558.4	human	genbank	58_37c	-1	validated	missense	c.490	p.H164N	0.001	superfamily_C2H2 and C2HC zinc fingers	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
