Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ABCA12	26154	genome.wustl.edu	37	2	215831626	215831626	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	2	215831626	215831626	G	A	SNP	ABCA12	NM_173076.2	human	genbank	58_37c	-1	reviewed	silent	c.5830	p.L1944	1.000	NULL	HMMPfam_ABC_tran,HMMSmart_SM00382,PatternScan_ABC_TRANSPORTER_1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
ABCA13	154664	genome.wustl.edu	37	7	48349591	48349591	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	7	48349591	48349591	G	T	SNP	ABCA13	NM_152701.3	human	genbank	58_37c	+1	reviewed	missense	c.9369	p.Q3123H	0.000	NULL	HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
ACTN2	88	genome.wustl.edu	37	1	236925894	236925894	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	1	236925894	236925894	C	A	SNP	ACTN2	NM_001103.2	human	genbank	58_37c	+1	reviewed	missense	c.2660	p.A887E	1.000	HMMPfam_efhand_Ca_insen,superfamily_EF-hand	PatternScan_ACTININ_1,PatternScan_ACTININ_2,HMMPfam_CH,HMMSmart_SM00033,HMMPfam_Spectrin,HMMSmart_SM00054,HMMPfam_efhand_Ca_insen,superfamily_Calponin-homology domain CH-domain,HMMSmart_SM00150,HMMPfam_efhand,superfamily_Spectrin repeat,superfamily_EF-hand	-	no_errors
ACTN4	81	genome.wustl.edu	37	19	39205151	39205151	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	19	39205151	39205151	A	-	DEL	ACTN4	NM_004924.3	human	genbank	58_37c	+1	reviewed	frame_shift_del	c.862	p.N288fs	1.000	superfamily_Spectrin	PatternScan_ACTININ_1,PatternScan_ACTININ_2,HMMPfam_CH,HMMSmart_CH,HMMPfam_Spectrin,HMMSmart_EFh,HMMPfam_efhand_Ca_insen,superfamily_Calponin-homology,HMMSmart_SPEC,PatternScan_EF_HAND_1,HMMPfam_efhand,superfamily_Spectrin,superfamily_SSF47473	-	no_errors
ANKK1	255239	genome.wustl.edu	37	11	113269799	113269799	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	11	113269799	113269799	G	A	SNP	ANKK1	NM_178510.1	human	genbank	58_37c	+1	reviewed	missense	c.1108	p.V370M	1.000	HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK	HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
ATM	472	genome.wustl.edu	37	11	108106472	108106472	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	11	108106472	108106472	T	-	DEL	ATM	NM_000051.3	human	genbank	58_37c	+1	reviewed	frame_shift_del	c.407	p.Y137fs	0.013	NULL	HMMPfam_PI3_PI4_kinase,HMMSmart_SM00146,HMMPfam_FAT,HMMPfam_FATC,superfamily_Protein kinase-like (PK-like),superfamily_ARM repeat,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2	-	no_errors
ATXN7L1	222255	genome.wustl.edu	37	7	105254792	105254792	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	7	105254792	105254792	C	G	SNP	ATXN7L1	NM_020725.1	human	genbank	58_37c	-1	validated	missense	c.1989	p.Q663H	1.000	NULL	HMMPfam_SCA7	-	no_errors
BCL11A	53335	genome.wustl.edu	37	2	60689460	60689460	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	2	60689460	60689460	C	G	SNP	BCL11A	NM_022893.3	human	genbank	58_37c	-1	reviewed	missense	c.587	p.R196T	1.000	superfamily_C2H2 and C2HC zinc fingers	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
C12orf36	283422	genome.wustl.edu	37	12	13529254	13529254	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	12	13529254	13529254	T	C	SNP	C12orf36	NM_182558.1	human	genbank	58_37c	-1	provisional	missense	c.86	p.D29G	0.009	NULL	NULL	-	no_errors
C13orf35	400165	genome.wustl.edu	37	13	113333794	113333794	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	13	113333794	113333794	A	G	SNP	C13orf35	NM_207440.1	human	genbank	58_37c	+1	provisional	missense	c.101	p.K34R	0.001	NULL	NULL	-	no_errors
C19orf62	29086	genome.wustl.edu	37	19	17379746	17379746	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	19	17379746	17379746	G	T	SNP	C19orf62	NM_001033549.1	human	genbank	58_37c	+1	validated	missense	c.131	p.S44I	0.326	NULL	NULL	-	no_errors
C20orf95	343578	genome.wustl.edu	37	20	37267927	37267927	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	20	37267927	37267927	G	T	SNP	C20orf95	ENST00000373345	human	ensembl	58_37c	+1	known	missense	c.1018	p.V340F	1.000	HMMPfam_RhoGAP,HMMSmart_RhoGAP,superfamily_Rho_GAP	HMMPfam_RhoGAP,HMMSmart_RhoGAP,superfamily_Rho_GAP	-	no_errors
CACNA1S	779	genome.wustl.edu	37	1	201079345	201079345	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	1	201079345	201079345	C	A	SNP	CACNA1S	NM_000069.2	human	genbank	58_37c	-1	reviewed	missense	c.205	p.A69S	1.000	superfamily_SSF81324	HMMPfam_Ion_trans,HMMPfam_Ca_chan_IQ,superfamily_SSF81324	-	no_errors
CAPRIN1	4076	genome.wustl.edu	37	11	34107665	34107679	+	In_Frame_Del	DEL	CCCCACTCTTTGACT	CCCCACTCTTTGACT	-	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	CCCCACTCTTTGACT	CCCCACTCTTTGACT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	11	34107665	34107679	CCCCACTCTTTGACT	-	DEL	CAPRIN1	NM_005898.4	human	genbank	58_37c	+1	validated	in_frame_del	c.1021_1035	p.HSLTP342in_frame_del	0.999:1.000:1.000:1.000:1.000:0.998:0.999:1.000:0.894:0.893:0.996:0.991:0.902:1.000:0.998	NULL	NULL	-	no_errors
CCDC126	90693	genome.wustl.edu	37	7	23682551	23682551	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	7	23682551	23682551	G	A	SNP	CCDC126	NM_138771.3	human	genbank	58_37c	+1	validated	silent	c.240	p.A80	1.000	NULL	NULL	-	no_errors
CSMD1	64478	genome.wustl.edu	37	8	3000129	3000129	+	Silent	SNP	T	T	G	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	8	3000129	3000129	T	G	SNP	CSMD1	NM_033225.5	human	genbank	58_37c	-1	validated	silent	c.6102	p.G2034	0.001	HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain	HMMPfam_Sushi,HMMSmart_SM00032,HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain,PatternScan_GLYCOSYL_HYDROL_F10,superfamily_Complement control module/SCR domain	-	no_errors
CWF19L1	55280	genome.wustl.edu	37	10	102003460	102003460	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	10	102003460	102003460	T	C	SNP	CWF19L1	NM_018294.4	human	genbank	58_37c	-1	validated	missense	c.1039	p.T347A	1.000	HMMPfam_CwfJ_C_1,superfamily_HIT-like	HMMPfam_CwfJ_C_2,HMMPfam_CwfJ_C_1,superfamily_HIT-like	-	no_errors
CYTSB	92521	genome.wustl.edu	37	17	20156897	20156897	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	17	20156897	20156897	C	T	SNP	CYTSB	NM_001033553.1	human	genbank	58_37c	+1	validated	missense	c.2678	p.S893L	0.999	NULL	HMMPfam_CH,HMMSmart_SM00033,superfamily_Calponin-homology domain CH-domain	-	no_errors
DAXX	1616	genome.wustl.edu	37	6	33288193	33288193	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	6	33288193	33288193	A	G	SNP	DAXX	NM_001141970.1	human	genbank	58_37c	-1	reviewed	silent	c.1251	p.S417	0.003	HMMPfam_Daxx	HMMPfam_Daxx	-	no_errors
DDX3X	1654	genome.wustl.edu	37	X	41204455	41204455	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	X	41204455	41204455	G	A	SNP	DDX3X	NM_001356.3	human	genbank	58_37c	+1	reviewed	missense	c.1048	p.D350N	1.000	PatternScan_DEAD_ATP_HELICASE,HMMPfam_DEAD,HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases	PatternScan_DEAD_ATP_HELICASE,HMMPfam_Helicase_C,HMMSmart_SM00490,HMMPfam_DEAD,HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
DEGS1	8560	genome.wustl.edu	37	1	224371065	224371065	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	1	224371065	224371065	C	A	SNP	DEGS1	NM_003676.2	human	genbank	58_37c	+1	reviewed	missense	c.27	p.D9E	1.000	HMMPfam_Lipid_DES	HMMPfam_FA_desaturase,HMMPfam_Lipid_DES	-	no_errors
DGAT2L6	347516	genome.wustl.edu	37	X	69424916	69424916	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	X	69424916	69424916	A	G	SNP	DGAT2L6	NM_198512.1	human	genbank	58_37c	+1	provisional	missense	c.974	p.E325G	0.810	HMMPfam_DAGAT	HMMPfam_DAGAT	-	no_errors
DPYS	1807	genome.wustl.edu	37	8	105441860	105441860	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	8	105441860	105441860	T	C	SNP	DPYS	NM_001385.2	human	genbank	58_37c	-1	reviewed	missense	c.863	p.E288G	1.000	HMMPfam_Amidohydro_1,superfamily_SSF51556	HMMPfam_Amidohydro_1,superfamily_Metalo_hydrolase,superfamily_SSF51556	-	no_errors
EIF4A3	9775	genome.wustl.edu	37	17	78112938	78112938	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	17	78112938	78112938	C	A	SNP	EIF4A3	NM_014740.3	human	genbank	58_37c	-1	reviewed	missense	c.610	p.V204L	0.999	HMMPfam_DEAD,HMMSmart_DEXDc,superfamily_SSF52540	PatternScan_DEAD_ATP_HELICASE,HMMPfam_Helicase_C,HMMSmart_HELICc,HMMPfam_DEAD,HMMSmart_DEXDc,superfamily_SSF52540	-	no_errors
ENAM	10117	genome.wustl.edu	37	4	71500244	71500244	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	4	71500244	71500244	C	A	SNP	ENAM	NM_031889.2	human	genbank	58_37c	+1	reviewed	missense	c.430	p.H144N	0.000	NULL	NULL	-	no_errors
ENPP2	5168	genome.wustl.edu	37	8	120613690	120613690	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	8	120613690	120613690	G	C	SNP	ENPP2	NM_006209.3	human	genbank	58_37c	-1	reviewed	missense	c.846	p.H282Q	0.027	HMMPfam_Phosphodiest,superfamily_Alkaline phosphatase-like	HMMPfam_Somatomedin_B,HMMSmart_SM00201,PatternScan_SMB_1,HMMPfam_Endonuclease_NS,HMMSmart_SM00477,HMMPfam_Phosphodiest,superfamily_Alkaline phosphatase-like,superfamily_His-Me finger endonucleases,superfamily_Somatomedin B domain	-	no_errors
FAM115A	9747	genome.wustl.edu	37	7	143573445	143573445	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	7	143573445	143573445	G	C	SNP	FAM115A	NM_014719.1	human	genbank	58_37c	-1	predicted	missense	c.257	p.S86C	0.861	NULL	NULL	-	no_errors
FAM48B1	170067	genome.wustl.edu	37	X	24381065	24381065	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	X	24381065	24381065	A	C	SNP	FAM48B1	NM_001136234.1	human	genbank	58_37c	+1	inferred	missense	c.188	p.N63T	1.000	NULL	NULL	-	no_errors
FLG	2312	genome.wustl.edu	37	1	152275739	152275739	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	1	152275739	152275739	C	A	SNP	FLG	NM_002016.1	human	genbank	58_37c	-1	reviewed	missense	c.11623	p.D3875Y	0.001	NULL	PatternScan_S100_CABP,HMMPfam_Filaggrin,HMMPfam_S_100,PatternScan_EF_HAND_1,superfamily_SSF47473	-	no_errors
FOLH1	2346	genome.wustl.edu	37	11	49175795	49175795	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	11	49175795	49175795	A	C	SNP	FOLH1	NM_004476.1	human	genbank	58_37c	-1	reviewed	missense	c.1873	p.Y625D	0.885	HMMPfam_TFR_dimer,superfamily_Transferrin receptor ectodomain C-terminal domain	HMMPfam_PA,HMMPfam_TFR_dimer,superfamily_Transferrin receptor ectodomain C-terminal domain,HMMPfam_Peptidase_M28,superfamily_Transferrin receptor ectodomain apical domain,superfamily_Zn-dependent exopeptidases	-	no_errors
FRMPD2	143162	genome.wustl.edu	37	10	49452893	49452893	+	Splice_Site	SNP	C	C	G	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	10	49452893	49452893	C	G	SNP	FRMPD2	NM_001018071.3	human	genbank	58_37c	-1	reviewed	splice_site	c.310-1	e4-1	0.964	-	-	-	no_errors
GATM	2628	genome.wustl.edu	37	15	45658607	45658607	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	15	45658607	45658607	T	A	SNP	GATM	NM_001482.2	human	genbank	58_37c	-1	reviewed	missense	c.775	p.I259F	1.000	HMMPfam_Amidinotransf,superfamily_Pentein	HMMPfam_Amidinotransf,PatternScan_TONB_DEPENDENT_REC_1,superfamily_Pentein	-	no_errors
GPR97	222487	genome.wustl.edu	37	16	57714218	57714233	+	Frame_Shift_Del	DEL	GTCAGACCTGAGGGGA	GTCAGACCTGAGGGGA	-	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	GTCAGACCTGAGGGGA	GTCAGACCTGAGGGGA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	16	57714218	57714233	GTCAGACCTGAGGGGA	-	DEL	GPR97	NM_170776.4	human	genbank	58_37c	+1	validated	frame_shift_del	c.709_724	p.V237fs	0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.030:0.392	HMMPfam_GPS,HMMSmart_GPS	HMMPfam_GPS,HMMSmart_GPS,HMMPfam_7tm_2,PatternScan_G_PROTEIN_RECEP_F2_1,PatternScan_G_PROTEIN_RECEP_F2_2	-	no_errors
HFM1	164045	genome.wustl.edu	37	1	91784682	91784682	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	1	91784682	91784682	T	A	SNP	HFM1	NM_001017975.3	human	genbank	58_37c	-1	validated	missense	c.2765	p.K922I	1.000	HMMPfam_Sec63	HMMPfam_Helicase_C,HMMSmart_SM00490,HMMPfam_Sec63,HMMPfam_DEAD,HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
HNRNPH3	3189	genome.wustl.edu	37	10	70097706	70097706	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	10	70097706	70097706	G	C	SNP	HNRNPH3	NM_012207.2	human	genbank	58_37c	+1	reviewed	missense	c.204	p.E68D	1.000	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD	-	no_errors
HOXB8	3218	genome.wustl.edu	37	17	46690618	46690618	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	17	46690618	46690618	C	A	SNP	HOXB8	NM_024016.3	human	genbank	58_37c	-1	reviewed	missense	c.678	p.E226D	1.000	NULL	HMMPfam_Homeobox,HMMSmart_HOX,PatternScan_ANTENNAPEDIA,superfamily_Homeodomain_like,PatternScan_HOMEOBOX_1	-	no_errors
IGF2BP3	10643	genome.wustl.edu	37	7	23352363	23352363	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	7	23352363	23352363	A	G	SNP	IGF2BP3	NM_006547.2	human	genbank	58_37c	-1	reviewed	silent	c.1632	p.Y544	1.000	HMMSmart_SM00322,HMMPfam_KH_1,superfamily_Eukaryotic type KH-domain (KH-domain type I)	HMMPfam_RRM_1,HMMSmart_SM00360,HMMSmart_SM00322,HMMPfam_KH_1,superfamily_Eukaryotic type KH-domain (KH-domain type I),superfamily_RNA-binding domain RBD	-	no_errors
IL18R1	8809	genome.wustl.edu	37	2	102988435	102988435	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	2	102988435	102988435	T	C	SNP	IL18R1	NM_003855.2	human	genbank	58_37c	+1	reviewed	silent	c.325	p.L109	0.024	HMMSmart_IG,HMMPfam_V-set,superfamily_SSF48726	HMMPfam_TIR,HMMSmart_TIR,superfamily_TIR,HMMSmart_IG,HMMPfam_V-set,superfamily_SSF48726	-	no_errors
IL6ST	3572	genome.wustl.edu	37	5	55237028	55237028	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	5	55237028	55237028	C	G	SNP	IL6ST	NM_002184.2	human	genbank	58_37c	-1	reviewed	missense	c.2639	p.G880A	0.000	NULL	PatternScan_HEMATOPO_REC_L_F2,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,HMMPfam_Lep_receptor_Ig	-	no_errors
IQGAP2	10788	genome.wustl.edu	37	5	75993917	75993917	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	5	75993917	75993917	C	T	SNP	IQGAP2	NM_006633.2	human	genbank	58_37c	+1	validated	nonsense	c.4312	p.Q1438*	1.000	HMMPfam_RasGAP_C	HMMPfam_IQ,HMMSmart_SM00015,HMMPfam_RasGAP_C,PatternScan_WW_DOMAIN_1,HMMPfam_CH,HMMSmart_SM00033,HMMPfam_RasGAP,HMMSmart_SM00323,PatternScan_RAS_GTPASE_ACTIV_1,superfamily_GTPase activation domain GAP,superfamily_Calponin-homology domain CH-domain,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
KCNQ3	3786	genome.wustl.edu	37	8	133150245	133150245	+	Silent	SNP	G	G	C	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	8	133150245	133150245	G	C	SNP	KCNQ3	NM_004519.2	human	genbank	58_37c	-1	reviewed	silent	c.1587	p.L529	1.000	HMMPfam_KCNQ_channel	HMMPfam_Ion_trans,HMMPfam_KCNQ_channel,superfamily_SSF81324	-	no_errors
LAMB2	3913	genome.wustl.edu	37	3	49162717	49162717	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	3	49162717	49162717	G	C	SNP	LAMB2	NM_002292.3	human	genbank	58_37c	-1	reviewed	missense	c.2689	p.R897G	1.000	HMMPfam_Laminin_EGF,HMMSmart_EGF_Lam,PatternScan_EGF_LAM_1,superfamily_SSF57196	HMMPfam_Laminin_EGF,HMMSmart_EGF_Lam,PatternScan_EGF_LAM_1,HMMPfam_Laminin_N,HMMSmart_LamNT,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_SSF57196	-	no_errors
LOC100131582	0	genome.wustl.edu	37	16	705201	705201	+	RNA	SNP	G	G	A	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	16	705201	705201	G	A	SNP	LOC100131582	XR_078511.1	human	genbank	58_37c	-1	model	rna	NULL	NULL	0.000	-	-	-	no_errors
LOC100289195	0	genome.wustl.edu	37	6	160882378	160882378	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	6	160882378	160882378	G	T	SNP	LOC100289195	XM_002342678.1	human	genbank	58_37c	-1	model	missense	c.142	p.Q48K	0.147	superfamily_Trypsin-like serine proteases	HMMPfam_Kringle,HMMSmart_SM00130,HMMPfam_Trypsin,HMMSmart_SM00020,superfamily_Trypsin-like serine proteases,superfamily_Kringle-like,PatternScan_KRINGLE_1,PatternScan_TRYPSIN_SER	-	no_errors
LOC100289289	0	genome.wustl.edu	37	15	62547578	62547578	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	15	62547578	62547578	G	A	SNP	LOC100289289	XM_002343368.1	human	genbank	58_37c	-1	model	missense	c.1844	p.A615V	0.002	NULL	PatternScan_GLYCOSYL_HYDROL_F1_1	-	no_errors
LOC100289488	0	genome.wustl.edu	37	1	201984385	201984385	+	Missense_Mutation	SNP	C	C	G	rs146061191	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	1	201984385	201984385	C	G	SNP	LOC100289488	XM_002342157.1	human	genbank	58_37c	-1	model	missense	c.124	p.E42Q	0.273	NULL	NULL	-	no_errors
LPHN2	23266	genome.wustl.edu	37	1	82416781	82416781	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	1	82416781	82416781	C	A	SNP	LPHN2	NM_012302.2	human	genbank	58_37c	+1	reviewed	missense	c.1572	p.H524Q	1.000	HMMPfam_HRM,HMMSmart_SM00008	HMMPfam_GPS,HMMSmart_SM00303,HMMPfam_7tm_2,HMMPfam_Gal_Lectin,HMMPfam_HRM,HMMSmart_SM00008,HMMPfam_OLF,HMMSmart_SM00284,HMMPfam_Latrophilin,PatternScan_G_PROTEIN_RECEP_F2_2	-	no_errors
LTBP2	4053	genome.wustl.edu	37	14	74972814	74972814	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	14	74972814	74972814	A	C	SNP	LTBP2	NM_000428.2	human	genbank	58_37c	-1	reviewed	missense	c.4114	p.C1372G	1.000	PatternScan_ASX_HYDROXYL,HMMSmart_SM00179,HMMSmart_SM00181,HMMPfam_EGF_CA,superfamily_EGF/Laminin	PatternScan_ASX_HYDROXYL,HMMSmart_SM00179,HMMPfam_TB,superfamily_TB module/8-cys domain,HMMPfam_EGF,HMMSmart_SM00181,superfamily_Growth factor receptor domain,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF_CA,HMMPfam_EGF_2,PatternScan_EGF_CA,superfamily_EGF/Laminin	-	no_errors
MAP3K10	4294	genome.wustl.edu	37	19	40720993	40720993	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	19	40720993	40720993	C	G	SNP	MAP3K10	NM_002446.3	human	genbank	58_37c	+1	reviewed	missense	c.2659	p.P887A	1.000	NULL	HMMPfam_SH3_1,HMMSmart_SH3,superfamily_SH3,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
MEIS1	4211	genome.wustl.edu	37	2	66664937	66664937	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	2	66664937	66664937	G	A	SNP	MEIS1	NM_002398.2	human	genbank	58_37c	+1	reviewed	silent	c.81	p.P27	1.000	NULL	HMMPfam_Homeobox,HMMSmart_SM00389,superfamily_Homeodomain-like	-	no_errors
MGAT3	4248	genome.wustl.edu	37	22	39884853	39884853	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	22	39884853	39884853	C	G	SNP	MGAT3	NM_001098270.1	human	genbank	58_37c	+1	reviewed	missense	c.1501	p.P501A	1.000	HMMPfam_Glyco_transf_17	HMMPfam_Glyco_transf_17	-	no_errors
MYH13	8735	genome.wustl.edu	37	17	10243510	10243510	+	Silent	SNP	A	A	T	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	17	10243510	10243510	A	T	SNP	MYH13	NM_003802.2	human	genbank	58_37c	-1	validated	silent	c.2013	p.P671	1.000	HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_Myosin_head,HMMSmart_SM00242,HMMPfam_Myosin_tail_1,HMMPfam_Myosin_N,superfamily_Prefoldin,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
MYO1F	4542	genome.wustl.edu	37	19	8620576	8620576	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	19	8620576	8620576	G	T	SNP	MYO1F	NM_012335.3	human	genbank	58_37c	-1	validated	missense	c.108	p.N36K	1.000	HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain,HMMPfam_Myosin_head,HMMSmart_SM00242,HMMPfam_Myosin_TH1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
MYST4	23522	genome.wustl.edu	37	10	76788498	76788498	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	10	76788498	76788498	A	T	SNP	MYST4	NM_012330.2	human	genbank	58_37c	+1	validated	missense	c.3916	p.R1306W	0.002	NULL	"HMMSmart_SM00249,HMMPfam_MOZ_SAS,HMMSmart_SM00526,superfamily_FYVE/PHD zinc finger,superfamily_Acyl-CoA N-acyltransferases (Nat),PatternScan_ZF_PHD_1,HMMPfam_PHD,superfamily_""Winged helix"" DNA-binding domain"	-	no_errors
NBPF7	343505	genome.wustl.edu	37	1	120379945	120379945	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	1	120379945	120379945	C	T	SNP	NBPF7	NM_001047980.1	human	genbank	58_37c	-1	predicted	silent	c.876	p.A292	0.000	HMMPfam_DUF1220	HMMPfam_DUF1220	-	no_errors
NCCRP1	342897	genome.wustl.edu	37	19	39691392	39691392	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	19	39691392	39691392	A	G	SNP	NCCRP1	NM_001001414.1	human	genbank	58_37c	+1	provisional	missense	c.824	p.E275G	0.976	NULL	HMMPfam_FBA,superfamily_Gal_bind_like	-	no_errors
NR0B2	8431	genome.wustl.edu	37	1	27238463	27238463	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	1	27238463	27238463	C	T	SNP	NR0B2	NM_021969.2	human	genbank	58_37c	-1	reviewed	missense	c.647	p.R216H	0.529	HMMPfam_Hormone_recep,HMMSmart_HOLI,superfamily_Str_ncl_receptor	HMMPfam_Hormone_recep,HMMSmart_HOLI,superfamily_Str_ncl_receptor	-	no_errors
OR2T11	127077	genome.wustl.edu	37	1	248789657	248789657	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	1	248789657	248789657	A	G	SNP	OR2T11	NM_001001964.1	human	genbank	58_37c	-1	provisional	missense	c.773	p.L258P	0.026	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
OR4K13	390433	genome.wustl.edu	37	14	20502724	20502724	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	14	20502724	20502724	T	G	SNP	OR4K13	NM_001004714.1	human	genbank	58_37c	-1	provisional	missense	c.194	p.N65T	0.072	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
OR52R1	119695	genome.wustl.edu	37	11	4825512	4825512	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	11	4825512	4825512	C	T	SNP	OR52R1	NM_001005177.3	human	genbank	58_37c	-1	validated	silent	c.336	p.P112	0.034	superfamily_Family A G protein-coupled receptor-like	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
OTUD7A	161725	genome.wustl.edu	37	15	31776741	31776741	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	15	31776741	31776741	C	T	SNP	OTUD7A	NM_130901.1	human	genbank	58_37c	-1	provisional	missense	c.1537	p.V513M	1.000	NULL	HMMSmart_SM00259,HMMPfam_OTU,superfamily_UBA-like	-	no_errors
PABPC1	26986	genome.wustl.edu	37	8	101733617	101733617	+	Splice_Site	SNP	A	A	T	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	8	101733617	101733617	A	T	SNP	PABPC1	NM_002568.3	human	genbank	58_37c	-1	validated	splice_site	c.193+2	e1+2	1.000	-	-	-	no_errors
PHLDB1	23187	genome.wustl.edu	37	11	118516531	118516531	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	11	118516531	118516531	C	A	SNP	PHLDB1	NM_001144758.1	human	genbank	58_37c	+1	validated	silent	c.3495	p.L1165	1.000	NULL	HMMPfam_FHA,HMMPfam_PH,HMMSmart_SM00233,superfamily_SMAD/FHA domain,superfamily_PH domain-like	-	no_errors
PRAMEF2	65122	genome.wustl.edu	37	1	12919596	12919596	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	1	12919596	12919596	C	T	SNP	PRAMEF2	NM_023014.1	human	genbank	58_37c	+1	provisional	silent	c.336	p.F112	0.062	superfamily_SSF52047	superfamily_SSF52047	-	no_errors
PROSC	11212	genome.wustl.edu	37	8	37635577	37635577	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	8	37635577	37635577	C	T	SNP	PROSC	NM_007198.3	human	genbank	58_37c	+1	validated	silent	c.783	p.C261	0.000	NULL	HMMPfam_Ala_racemase_N,PatternScan_UPF0001,superfamily_SSF51419	-	no_errors
PTPRZ1	5803	genome.wustl.edu	37	7	121652195	121652195	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	7	121652195	121652195	C	T	SNP	PTPRZ1	NM_002851.2	human	genbank	58_37c	+1	reviewed	missense	c.3095	p.S1032F	1.000	NULL	HMMPfam_Y_phosphatase,HMMSmart_SM00194,HMMPfam_Carb_anhydrase,superfamily_Carbonic anhydrase,HMMSmart_SM00404,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,PatternScan_TYR_PHOSPHATASE_1,superfamily_(Phosphotyrosine protein) phosphatases II	-	no_errors
PYGM	5837	genome.wustl.edu	37	11	64527236	64527251	+	Frame_Shift_Del	DEL	ATTGCGGTCCTTTACG	ATTGCGGTCCTTTACG	-	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	ATTGCGGTCCTTTACG	ATTGCGGTCCTTTACG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	11	64527236	64527251	ATTGCGGTCCTTTACG	-	DEL	PYGM	NM_005609.2	human	genbank	58_37c	-1	reviewed	frame_shift_del	c.135_120	p.V41fs	0.987:1.000:1.000:0.998:1.000:1.000:1.000:1.000:1.000:1.000:1.000:0.999:0.559:0.999:1.000:0.983	superfamily_SSF53756	HMMPfam_Phosphorylase,PatternScan_PHOSPHORYLASE,superfamily_SSF53756	-	no_errors
RBPJL	11317	genome.wustl.edu	37	20	43936867	43936867	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	20	43936867	43936867	G	T	SNP	RBPJL	NM_014276.2	human	genbank	58_37c	+1	reviewed	missense	c.107	p.R36L	0.882	NULL	HMMPfam_TIG,superfamily_P53_like_DNA_bnd,superfamily_Ig_E-set,HMMPfam_Beta-trefoil,superfamily_Beta-trefoil,HMMPfam_LAG1-DNAbind	-	no_errors
REM1	28954	genome.wustl.edu	37	20	30070112	30070112	+	Nonsense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	20	30070112	30070112	C	G	SNP	REM1	NM_014012.4	human	genbank	58_37c	+1	reviewed	nonsense	c.446	p.S149*	0.000	HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
RNF13	11342	genome.wustl.edu	37	3	149619889	149619889	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	3	149619889	149619889	C	T	SNP	RNF13	NM_007282.4	human	genbank	58_37c	+1	reviewed	missense	c.440	p.S147F	1.000	HMMPfam_PA,superfamily_Transferrin receptor ectodomain apical domain	HMMSmart_SM00184,HMMPfam_PA,PatternScan_EGF_2,HMMPfam_zf-C3HC4,superfamily_Transferrin receptor ectodomain apical domain,superfamily_RING/U-box	-	no_errors
RNF169	254225	genome.wustl.edu	37	11	74546847	74546847	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	11	74546847	74546847	G	A	SNP	RNF169	NM_001098638.1	human	genbank	58_37c	+1	validated	missense	c.1199	p.R400H	0.997	NULL	HMMSmart_RING,PatternScan_ZF_RING_1,HMMPfam_zf-C3HC4,superfamily_SSF57850	-	no_errors
RSPH1	89765	genome.wustl.edu	37	21	43906485	43906485	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	21	43906485	43906485	G	C	SNP	RSPH1	NM_080860.2	human	genbank	58_37c	-1	validated	missense	c.361	p.Q121E	1.000	HMMPfam_MORN,HMMSmart_SM00698,superfamily_Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain	HMMPfam_MORN,HMMSmart_SM00698,superfamily_Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain	-	no_errors
SCN2A	6326	genome.wustl.edu	37	2	166201296	166201296	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	2	166201296	166201296	T	A	SNP	SCN2A	NM_001040142.1	human	genbank	58_37c	+1	reviewed	missense	c.2794	p.F932I	1.000	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels	HMMPfam_IQ,HMMSmart_SM00015,HMMPfam_Ion_trans,HMMPfam_Na_trans_assoc,superfamily_Voltage-gated potassium channels	-	no_errors
SH3BP1	23616	genome.wustl.edu	37	22	38044419	38044419	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	22	38044419	38044419	G	T	SNP	SH3BP1	NM_018957.3	human	genbank	58_37c	+1	validated	missense	c.1293	p.L431F	1.000	HMMPfam_RhoGAP,HMMSmart_SM00324,superfamily_GTPase activation domain GAP	HMMPfam_RhoGAP,HMMSmart_SM00324,HMMPfam_BAR,HMMSmart_SM00721,superfamily_GTPase activation domain GAP	-	no_errors
SIPA1L2	57568	genome.wustl.edu	37	1	232581367	232581367	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	1	232581367	232581367	G	A	SNP	SIPA1L2	NM_020808.3	human	genbank	58_37c	-1	validated	silent	c.3261	p.P1087	0.797	NULL	HMMPfam_Rap_GAP,HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like,superfamily_Rap/Ran-GAP (Pfam 02145)	-	no_errors
SLC12A5	57468	genome.wustl.edu	37	20	44676722	44676722	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	20	44676722	44676722	G	C	SNP	SLC12A5	NM_001134771.1	human	genbank	58_37c	+1	reviewed	missense	c.2079	p.W693C	1.000	HMMPfam_AA_permease	HMMPfam_AA_permease	-	no_errors
SLC13A5	284111	genome.wustl.edu	37	17	6599001	6599001	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	17	6599001	6599001	C	T	SNP	SLC13A5	ENST00000381074	human	ensembl	58_37c	-1	known	missense	c.923	p.R308H	0.002	NULL	HMMPfam_Na_sulph_symp	-	no_errors
SLC22A3	6581	genome.wustl.edu	37	6	160858230	160858230	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	6	160858230	160858230	G	A	SNP	SLC22A3	NM_021977.2	human	genbank	58_37c	+1	reviewed	silent	c.1275	p.A425	0.997	HMMPfam_MFS_1,superfamily_MFS general substrate transporter	PatternScan_SUGAR_TRANSPORT_1,HMMPfam_MFS_1,superfamily_MFS general substrate transporter	-	no_errors
SMEK1	55671	genome.wustl.edu	37	14	91948389	91948389	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	14	91948389	91948389	G	A	SNP	SMEK1	NM_032560.4	human	genbank	58_37c	-1	validated	missense	c.446	p.S149L	1.000	NULL	HMMPfam_DUF625,superfamily_ARM-type_fold,superfamily_SSF50729	-	no_errors
STRN4	29888	genome.wustl.edu	37	19	47242077	47242077	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	19	47242077	47242077	C	T	SNP	STRN4	NM_001039877.1	human	genbank	58_37c	-1	validated	silent	c.351	p.R117	1.000	HMMPfam_Striatin	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_Striatin,PatternScan_WD_REPEATS_1,HMMPfam_WD40	-	no_errors
SUPT5H	6829	genome.wustl.edu	37	19	39957372	39957372	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	19	39957372	39957372	G	T	SNP	SUPT5H	NM_001111020.2	human	genbank	58_37c	+1	validated	missense	c.1024	p.A342S	1.000	NULL	HMMPfam_Supt5,HMMPfam_KOW,HMMSmart_SM00739,HMMSmart_SM00738,superfamily_Translation proteins SH3-like domain	-	no_errors
SYDE2	84144	genome.wustl.edu	37	1	85624636	85624636	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	1	85624636	85624636	T	C	SNP	SYDE2	NM_032184.1	human	genbank	58_37c	-1	validated	missense	c.3382	p.K1128E	0.080	NULL	HMMPfam_RhoGAP,HMMSmart_SM00324,superfamily_GTPase activation domain GAP,superfamily_C2 domain (Calcium/lipid-binding domain CaLB)	-	no_errors
SYT9	143425	genome.wustl.edu	37	11	7334807	7334807	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	11	7334807	7334807	A	G	SNP	SYT9	NM_175733.3	human	genbank	58_37c	+1	validated	missense	c.679	p.I227V	1.000	superfamily_C2_CaLB	HMMPfam_C2,HMMSmart_C2,superfamily_C2_CaLB	-	no_errors
TEX14	56155	genome.wustl.edu	37	17	56688647	56688647	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	17	56688647	56688647	C	T	SNP	TEX14	NM_198393.2	human	genbank	58_37c	-1	reviewed	silent	c.1059	p.Q353	0.944	HMMPfam_Pkinase_Tyr,superfamily_Kinase_like	HMMPfam_Pkinase_Tyr,HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK,superfamily_Kinase_like	-	no_errors
TMEM38A	79041	genome.wustl.edu	37	19	16793232	16793232	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	19	16793232	16793232	G	T	SNP	TMEM38A	NM_024074.1	human	genbank	58_37c	+1	provisional	missense	c.467	p.G156V	1.000	HMMPfam_DUF714	HMMPfam_DUF714	-	no_errors
TMEM63B	55362	genome.wustl.edu	37	6	44119646	44119646	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	6	44119646	44119646	C	T	SNP	TMEM63B	NM_018426.1	human	genbank	58_37c	+1	validated	silent	c.1737	p.I579	1.000	HMMPfam_DUF221	HMMPfam_DUF221	-	no_errors
TNN	63923	genome.wustl.edu	37	1	175067625	175067625	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	1	175067625	175067625	C	T	SNP	TNN	NM_022093.1	human	genbank	58_37c	+1	validated	silent	c.2013	p.S671	0.139	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III	HMMPfam_Fibrinogen_C,HMMSmart_SM00186,PatternScan_FIBRIN_AG_C_DOMAIN,superfamily_Fibrinogen C-terminal domain-like,HMMPfam_fn3,HMMSmart_SM00060,HMMSmart_SM00181,superfamily_Fibronectin type III,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF_2,superfamily_EGF/Laminin	-	no_errors
TP53	7157	genome.wustl.edu	37	17	7578406	7578406	+	Missense_Mutation	SNP	C	C	T	rs28934578	byCluster	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	17	7578406	7578406	C	T	SNP	TP53	NM_000546.4	human	genbank	58_37c	-1	reviewed	missense	c.524	p.R175H	1.000	superfamily_p53-like transcription factors,HMMPfam_P53	PatternScan_P53,superfamily_p53-like transcription factors,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain,HMMPfam_P53,HMMPfam_P53_TAD	-	no_errors
TP53I3	9540	genome.wustl.edu	37	2	24303814	24303814	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	2	24303814	24303814	C	T	SNP	TP53I3	ENST00000417886	human	ensembl	58_37c	-1	known	nonsense	c.378	p.W126*	0.061	NULL	superfamily_GroES-like,HMMPfam_ADH_N	-	no_errors
TRAM2	9697	genome.wustl.edu	37	6	52370475	52370475	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	6	52370475	52370475	G	C	SNP	TRAM2	NM_012288.3	human	genbank	58_37c	-1	reviewed	missense	c.797	p.A266G	1.000	HMMPfam_TRAM_LAG1_CLN8,HMMSmart_SM00724	HMMPfam_TRAM_LAG1_CLN8,HMMSmart_SM00724,HMMPfam_TRAM1	-	no_errors
USP6	9098	genome.wustl.edu	37	17	5036239	5036239	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	17	5036239	5036239	G	T	SNP	USP6	NM_004505.2	human	genbank	58_37c	+1	validated	missense	c.230	p.W77L	1.000	superfamily_Ypt/Rab-GAP domain of gyp1p	HMMPfam_TBC,HMMSmart_SM00164,superfamily_Ypt/Rab-GAP domain of gyp1p,HMMPfam_UCH,PatternScan_UCH_2_1,PatternScan_UCH_2_2,superfamily_Cysteine proteinases	-	no_errors
VPS13B	157680	genome.wustl.edu	37	8	100866232	100866232	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	8	100866232	100866232	G	C	SNP	VPS13B	NM_017890.3	human	genbank	58_37c	+1	reviewed	missense	c.10690	p.G3564R	0.000	NULL	PatternScan_ZINC_PROTEASE	-	no_errors
WDR81	124997	genome.wustl.edu	37	17	1630415	1630415	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	17	1630415	1630415	T	G	SNP	WDR81	ENST00000409644	human	ensembl	58_37c	+1	known	missense	c.2162	p.L721R	1.000	superfamily_WD40 repeat-like	HMMPfam_Beach,superfamily_BEACH domain,HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40,PatternScan_FBPASE	-	no_errors
ZFHX4	79776	genome.wustl.edu	37	8	77761274	77761274	+	Silent	SNP	G	G	C	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	8	77761274	77761274	G	C	SNP	ZFHX4	NM_024721.4	human	genbank	58_37c	+1	validated	silent	c.3420	p.G1140	0.991	NULL	HMMPfam_Homeobox,HMMSmart_SM00389,HMMSmart_SM00451,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,superfamily_Homeodomain-like,HMMSmart_SM00355,PatternScan_HOMEOBOX_1,PatternScan_SOMATOTROPIN_2,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZNF365	22891	genome.wustl.edu	37	10	64136169	64136169	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	10	64136169	64136169	C	A	SNP	ZNF365	NM_199451.2	human	genbank	58_37c	+1	reviewed	missense	c.217	p.L73I	1.000	NULL	HMMSmart_ZnF_C2H2	-	no_errors
ZNF460	10794	genome.wustl.edu	37	19	57803047	57803047	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	19	57803047	57803047	G	C	SNP	ZNF460	NM_006635.3	human	genbank	58_37c	+1	validated	missense	c.1138	p.V380L	0.037	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
ZNF500	26048	genome.wustl.edu	37	16	4802723	4802723	+	Missense_Mutation	SNP	G	G	T	rs138320212	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	16	4802723	4802723	G	T	SNP	ZNF500	NM_021646.1	human	genbank	58_37c	-1	validated	missense	c.1097	p.S366Y	0.999	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box,HMMPfam_SCAN,HMMSmart_SCAN,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
ZP2	7783	genome.wustl.edu	37	16	21209118	21209118	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AO-A129-01A-21D-A10M-09	TCGA-AO-A129-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	cdf43c25-3ba7-4073-a92d-4a97f651f4a8	c60ba4ed-706e-4e4b-bfcc-8ec36ff0fbd8	16	21209118	21209118	C	G	SNP	ZP2	NM_003460.1	human	genbank	58_37c	-1	reviewed	missense	c.2064	p.R688S	0.000	NULL	HMMPfam_Zona_pellucida,HMMSmart_SM00241,PatternScan_ZP_1	-	no_errors
