Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ABCB4	5244	genome.wustl.edu	37	7	87051523	87051523	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	7	87051523	87051523	C	T	SNP	ABCB4	NM_018849.2	human	genbank	58_37c	-1	reviewed	missense	c.2230	p.D744N	0.398	HMMPfam_ABC_membrane,superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain	HMMPfam_ABC_membrane,HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain,PatternScan_ABC_TRANSPORTER_1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
ABCC4	10257	genome.wustl.edu	37	13	95715010	95715010	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	13	95715010	95715010	G	T	SNP	ABCC4	NM_005845.3	human	genbank	58_37c	-1	reviewed	missense	c.3314	p.T1105K	1.000	HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_ABC_membrane,HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain,PatternScan_ABC_TRANSPORTER_1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
ADRM1	11047	genome.wustl.edu	37	20	60878683	60878683	+	Missense_Mutation	SNP	A	A	G	rs11544169	byCluster;byFrequency;by1000genomes	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	20	60878683	60878683	A	G	SNP	ADRM1	NM_007002.2	human	genbank	58_37c	+1	reviewed	missense	c.59	p.N20S	0.998	NULL	HMMPfam_ARM_1	-	no_errors
ANKAR	150709	genome.wustl.edu	37	2	190569785	190569785	+	Nonsense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	2	190569785	190569785	C	G	SNP	ANKAR	NM_144708.3	human	genbank	58_37c	+1	validated	nonsense	c.1532	p.S511*	0.997	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat	HMMPfam_Arm,HMMSmart_SM00185,HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat,superfamily_ARM repeat	-	no_errors
APOB	338	genome.wustl.edu	37	2	21232581	21232585	+	Frame_Shift_Del	DEL	TTATC	TTATC	-	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	TTATC	TTATC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	2	21232581	21232585	TTATC	-	DEL	APOB	NM_000384.2	human	genbank	58_37c	-1	reviewed	frame_shift_del	c.7159_7155	p.I2386fs	0.025:0.003:0.050:0.008:0.003	NULL	HMMPfam_Vitellogenin_N,HMMSmart_SM00638,HMMPfam_DUF1081,HMMPfam_DUF1943,superfamily_Lipovitellin-phosvitin complex beta-sheet shell regions,superfamily_Lipovitellin-phosvitin complex superhelical domain	-	no_errors
APP	351	genome.wustl.edu	37	21	27354686	27354686	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	21	27354686	27354686	C	G	SNP	APP	NM_000484.3	human	genbank	58_37c	-1	reviewed	missense	c.1195	p.E399Q	1.000	superfamily_CAPPD an extracellular domain of amyloid beta A4 protein	HMMPfam_Kunitz_BPTI,HMMSmart_SM00131,PatternScan_BPTI_KUNITZ_1,superfamily_BPTI-like,HMMPfam_A4_EXTRA,HMMSmart_SM00006,superfamily_Amyloid beta a4 protein copper binding domain (domain 2),HMMPfam_Beta-APP,superfamily_A heparin-binding domain,HMMPfam_APP_amyloid,PatternScan_A4_EXTRA,PatternScan_A4_INTRA,superfamily_CAPPD an extracellular domain of amyloid beta A4 protein	-	no_errors
ASAP2	8853	genome.wustl.edu	37	2	9531255	9531255	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	2	9531255	9531255	C	T	SNP	ASAP2	NM_003887.2	human	genbank	58_37c	+1	reviewed	silent	c.2448	p.S816	1.000	NULL	HMMPfam_ArfGap,HMMSmart_SM00105,superfamily_Pyk2-associated protein beta ARF-GAP domain,HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain,HMMPfam_PH,HMMSmart_SM00233,HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat,superfamily_PH domain-like	-	no_errors
ATF7IP2	80063	genome.wustl.edu	37	16	10524750	10524750	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	16	10524750	10524750	C	T	SNP	ATF7IP2	NM_024997.2	human	genbank	58_37c	+1	validated	silent	c.273	p.F91	0.000	NULL	NULL	-	no_errors
B3GALNT1	8706	genome.wustl.edu	37	3	160804170	160804170	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	3	160804170	160804170	C	G	SNP	B3GALNT1	NM_001038628.1	human	genbank	58_37c	-1	reviewed	missense	c.373	p.E125Q	0.717	HMMPfam_Galactosyl_T	HMMPfam_Galactosyl_T	-	no_errors
C10orf12	26148	genome.wustl.edu	37	10	98743922	98743922	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	10	98743922	98743922	G	C	SNP	C10orf12	NM_015652.2	human	genbank	58_37c	+1	predicted	missense	c.2775	p.L925F	1.000	NULL	NULL	-	no_errors
C13orf23	80209	genome.wustl.edu	37	13	39587225	39587225	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	13	39587225	39587225	G	T	SNP	C13orf23	NM_025138.3	human	genbank	58_37c	-1	validated	missense	c.2164	p.P722T	0.069	NULL	NULL	-	no_errors
C18orf10	25941	genome.wustl.edu	37	18	34380248	34380248	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	18	34380248	34380248	G	C	SNP	C18orf10	NM_015476.2	human	genbank	58_37c	-1	provisional	missense	c.409	p.H137D	1.000	NULL	NULL	-	no_errors
C19orf39	126074	genome.wustl.edu	37	19	11486225	11486225	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	19	11486225	11486225	C	T	SNP	C19orf39	NM_175871.3	human	genbank	58_37c	+1	validated	missense	c.223	p.L75F	0.962	superfamily_SSF52540	superfamily_SSF52540	-	no_errors
C1orf65	164127	genome.wustl.edu	37	1	223568234	223568234	+	Missense_Mutation	SNP	G	G	A	rs150202794	byFrequency	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	1	223568234	223568234	G	A	SNP	C1orf65	NM_152610.2	human	genbank	58_37c	+1	validated	missense	c.1417	p.E473K	0.708	NULL	NULL	-	no_errors
CACNA1E	777	genome.wustl.edu	37	1	181726188	181726188	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	1	181726188	181726188	G	T	SNP	CACNA1E	NM_000721.2	human	genbank	58_37c	+1	reviewed	missense	c.4255	p.V1419L	1.000	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels	HMMPfam_Ion_trans,HMMPfam_Ca_chan_IQ,superfamily_Voltage-gated potassium channels	-	no_errors
CAPN3	825	genome.wustl.edu	37	15	42646653	42646653	+	Splice_Site	SNP	T	T	A	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	15	42646653	42646653	T	A	SNP	CAPN3	NM_212465.2	human	genbank	58_37c	+1	reviewed	splice_site	c.48+2	e1+2	0.000	-	-	-	no_errors
CARD11	84433	genome.wustl.edu	37	7	2979469	2979469	+	Silent	SNP	G	G	T	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	7	2979469	2979469	G	T	SNP	CARD11	NM_032415.3	human	genbank	58_37c	-1	validated	silent	c.778	p.R260	1.000	NULL	HMMPfam_CARD,HMMSmart_PDZ,superfamily_PDZ,superfamily_DEATH_like,PatternScan_GUANYLATE_KINASE_1,superfamily_SSF52540	-	no_errors
CCDC28B	79140	genome.wustl.edu	37	1	32669526	32669526	+	Missense_Mutation	SNP	G	G	T	rs145792550	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	1	32669526	32669526	G	T	SNP	CCDC28B	NM_024296.3	human	genbank	58_37c	+1	reviewed	missense	c.211	p.G71C	0.989	NULL	NULL	-	no_errors
CCDC53	51019	genome.wustl.edu	37	12	102437882	102437882	+	Splice_Site	SNP	C	C	A	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	12	102437882	102437882	C	A	SNP	CCDC53	NM_016053.2	human	genbank	58_37c	-1	validated	splice_site	c.324+1	e4+1	1.000	-	-	-	no_errors
CCT5	22948	genome.wustl.edu	37	5	10261724	10261724	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	5	10261724	10261724	C	T	SNP	CCT5	NM_012073.3	human	genbank	58_37c	+1	reviewed	missense	c.1046	p.T349I	1.000	HMMPfam_Cpn60_TCP1,superfamily_GroEL equatorial domain-like,superfamily_GroEL apical domain-like,superfamily_GroEL-intermediate domain like	PatternScan_TCP1_1,PatternScan_TCP1_2,PatternScan_TCP1_3,HMMPfam_Cpn60_TCP1,superfamily_GroEL equatorial domain-like,superfamily_GroEL apical domain-like,superfamily_GroEL-intermediate domain like	-	no_errors
CECR5	27440	genome.wustl.edu	37	22	17619469	17619469	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	22	17619469	17619469	G	A	SNP	CECR5	NM_033070.2	human	genbank	58_37c	-1	validated	silent	c.906	p.A302	0.000	superfamily_HAD-like	superfamily_HAD-like	-	no_errors
CELF2	0	genome.wustl.edu	37	10	11299809	11299809	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	10	11299809	11299809	T	C	SNP	CELF2	NM_006561.3	human	genbank	58_37c	+1	reviewed	missense	c.512	p.L171P	1.000	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD	-	no_errors
CEP350	9857	genome.wustl.edu	37	1	179989393	179989393	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	1	179989393	179989393	G	C	SNP	CEP350	NM_014810.4	human	genbank	58_37c	+1	reviewed	missense	c.2484	p.L828F	1.000	NULL	HMMPfam_CAP_GLY,PatternScan_CAP_GLY_1,superfamily_SSF74924	-	no_errors
CIT	11113	genome.wustl.edu	37	12	120295450	120295450	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	12	120295450	120295450	G	A	SNP	CIT	NM_007174.1	human	genbank	58_37c	-1	validated	silent	c.291	p.F97	1.000	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase	HMMSmart_SM00133,HMMPfam_CNH,HMMSmart_SM00036,HMMSmart_SM00219,HMMPfam_PH,HMMSmart_SM00233,HMMPfam_C1_1,HMMSmart_SM00109,PatternScan_ZF_DAG_PE_1,HMMSmart_SM00220,PatternScan_CPSASE_2,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,HMMPfam_Pkinase_C,superfamily_PH domain-like,superfamily_Cysteine-rich domain	-	no_errors
COL12A1	1303	genome.wustl.edu	37	6	75833788	75833788	+	Silent	SNP	T	T	C	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	6	75833788	75833788	T	C	SNP	COL12A1	NM_004370.5	human	genbank	58_37c	-1	reviewed	silent	c.6747	p.T2249	0.944	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III	HMMPfam_VWA,HMMSmart_SM00327,HMMSmart_SM00210,HMMPfam_fn3,HMMSmart_SM00060,HMMPfam_Collagen,superfamily_Fibronectin type III,superfamily_Concanavalin A-like lectins/glucanases,superfamily_vWA-like	-	no_errors
COL12A1	1303	genome.wustl.edu	37	6	75893166	75893166	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	6	75893166	75893166	G	A	SNP	COL12A1	NM_004370.5	human	genbank	58_37c	-1	reviewed	silent	c.1491	p.F497	0.992	HMMPfam_VWA,HMMSmart_SM00327,superfamily_vWA-like	HMMPfam_VWA,HMMSmart_SM00327,HMMSmart_SM00210,HMMPfam_fn3,HMMSmart_SM00060,HMMPfam_Collagen,superfamily_Fibronectin type III,superfamily_Concanavalin A-like lectins/glucanases,superfamily_vWA-like	-	no_errors
COL23A1	91522	genome.wustl.edu	37	5	177695751	177695751	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	5	177695751	177695751	G	A	SNP	COL23A1	NM_173465.3	human	genbank	58_37c	-1	validated	missense	c.475	p.P159S	1.000	NULL	HMMPfam_Collagen	-	no_errors
COL5A2	1290	genome.wustl.edu	37	2	189950468	189950468	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	2	189950468	189950468	C	T	SNP	COL5A2	NM_000393.3	human	genbank	58_37c	-1	reviewed	missense	c.721	p.E241K	1.000	HMMPfam_Collagen	HMMPfam_COLFI,HMMSmart_COLFI,HMMPfam_VWC,HMMSmart_VWC,PatternScan_VWFC_1,HMMPfam_Collagen	-	no_errors
COL7A1	1294	genome.wustl.edu	37	3	48612531	48612531	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	3	48612531	48612531	C	T	SNP	COL7A1	NM_000094.3	human	genbank	58_37c	-1	reviewed	missense	c.6245	p.G2082E	0.964	HMMPfam_Collagen	HMMPfam_VWA,HMMSmart_SM00327,HMMPfam_Kunitz_BPTI,PatternScan_BPTI_KUNITZ_1,superfamily_BPTI-like,HMMPfam_fn3,HMMSmart_SM00060,HMMPfam_Collagen,superfamily_Fibronectin type III,superfamily_vWA-like	-	no_errors
CPA1	1357	genome.wustl.edu	37	7	130023271	130023271	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	7	130023271	130023271	G	A	SNP	CPA1	NM_001868.2	human	genbank	58_37c	+1	reviewed	missense	c.523	p.D175N	1.000	HMMPfam_Peptidase_M14,HMMSmart_Zn_pept,PatternScan_CARBOXYPEPT_ZN_1,superfamily_SSF53187	HMMPfam_Peptidase_M14,HMMSmart_Zn_pept,PatternScan_CARBOXYPEPT_ZN_1,PatternScan_CARBOXYPEPT_ZN_2,HMMPfam_Propep_M14,superfamily_Prot_inh_propept,superfamily_SSF53187	-	no_errors
CPT2	1376	genome.wustl.edu	37	1	53676541	53676541	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	1	53676541	53676541	C	T	SNP	CPT2	NM_000098.2	human	genbank	58_37c	+1	reviewed	missense	c.1195	p.P399S	0.995	HMMPfam_Carn_acyltransf,superfamily_CoA-dependent acyltransferases	HMMPfam_Carn_acyltransf,PatternScan_ACYLTRANSF_C_1,PatternScan_ACYLTRANSF_C_2,superfamily_CoA-dependent acyltransferases	-	no_errors
CSE1L	1434	genome.wustl.edu	37	20	47691354	47691356	+	In_Frame_Del	DEL	GAG	GAG	-	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	GAG	GAG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	20	47691354	47691356	GAG	-	DEL	CSE1L	NM_001316.2	human	genbank	58_37c	+1	reviewed	in_frame_del	c.1099_1101	p.E368in_frame_del	1.000:1.000:1.000	HMMPfam_Cse1,superfamily_ARM repeat	HMMPfam_IBN_N,HMMPfam_CAS_CSE1,HMMPfam_Cse1,superfamily_ARM repeat	-	no_errors
CTLA4	1493	genome.wustl.edu	37	2	204737449	204737449	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	2	204737449	204737449	C	G	SNP	CTLA4	NM_005214.3	human	genbank	58_37c	+1	reviewed	missense	c.586	p.L196V	1.000	NULL	HMMSmart_IGv,HMMPfam_V-set,superfamily_SSF48726	-	no_errors
CYP2S1	29785	genome.wustl.edu	37	19	41703830	41703830	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	19	41703830	41703830	G	A	SNP	CYP2S1	NM_030622.6	human	genbank	58_37c	+1	reviewed	missense	c.490	p.E164K	0.000	HMMPfam_p450,superfamily_Cytochrome P450	HMMPfam_p450,superfamily_Cytochrome P450,PatternScan_CYTOCHROME_P450	-	no_errors
DCBLD2	131566	genome.wustl.edu	37	3	98518306	98518306	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	3	98518306	98518306	G	A	SNP	DCBLD2	NM_080927.3	human	genbank	58_37c	-1	validated	silent	c.2238	p.D746	0.035	NULL	HMMPfam_F5_F8_type_C,HMMSmart_SM00231,PatternScan_FA58C_1,HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain,HMMPfam_LCCL,HMMSmart_SM00603,superfamily_LCCL domain,superfamily_Galactose-binding domain-like	-	no_errors
DDR2	4921	genome.wustl.edu	37	1	162724596	162724596	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	1	162724596	162724596	G	T	SNP	DDR2	NM_001014796.1	human	genbank	58_37c	+1	reviewed	missense	c.368	p.S123I	1.000	HMMPfam_F5_F8_type_C,HMMSmart_FA58C,superfamily_Gal_bind_like	HMMPfam_F5_F8_type_C,HMMSmart_FA58C,PatternScan_FA58C_1,PatternScan_FA58C_2,HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,PatternScan_RECEPTOR_TYR_KIN_II,PatternScan_PROTEIN_KINASE_TYR,superfamily_Gal_bind_like,superfamily_Kinase_like	-	no_errors
DECR1	1666	genome.wustl.edu	37	8	91029554	91029554	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	8	91029554	91029554	G	C	SNP	DECR1	NM_001359.1	human	genbank	58_37c	+1	reviewed	missense	c.272	p.R91P	1.000	HMMPfam_adh_short,superfamily_NAD(P)-bd	HMMPfam_adh_short,PatternScan_ADH_SHORT,superfamily_NAD(P)-bd	-	no_errors
DNAH3	55567	genome.wustl.edu	37	16	20996525	20996525	+	Silent	SNP	G	G	A	rs139502385	byCluster;byFrequency;by1000genomes	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	16	20996525	20996525	G	A	SNP	DNAH3	NM_017539.1	human	genbank	58_37c	-1	provisional	silent	c.7539	p.D2513	0.055	superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMSmart_SM00382,HMMPfam_Dynein_heavy,superfamily_Prefoldin,HMMPfam_AAA_5,HMMPfam_DHC_N2,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
DNAH9	1770	genome.wustl.edu	37	17	11672535	11672535	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	17	11672535	11672535	G	A	SNP	DNAH9	NM_001372.3	human	genbank	58_37c	+1	reviewed	missense	c.7441	p.G2481S	1.000	HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMSmart_SM00382,HMMPfam_Dynein_heavy,PatternScan_CPSASE_2,HMMPfam_AAA_5,HMMPfam_DHC_N1,HMMPfam_DHC_N2,superfamily_Spectrin repeat,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
DNAJC27	51277	genome.wustl.edu	37	2	25180735	25180735	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	2	25180735	25180735	C	A	SNP	DNAJC27	NM_016544.1	human	genbank	58_37c	-1	provisional	nonsense	c.349	p.E117*	1.000	HMMSmart_SM00176,HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_DnaJ,HMMSmart_SM00271,superfamily_Chaperone J-domain,HMMSmart_SM00176,HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
DOCK8	81704	genome.wustl.edu	37	9	434905	434905	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	9	434905	434905	C	G	SNP	DOCK8	NM_203447.3	human	genbank	58_37c	+1	reviewed	missense	c.4805	p.A1602G	1.000	NULL	HMMPfam_Ded_cyto	-	no_errors
DSCAM	1826	genome.wustl.edu	37	21	41710062	41710062	+	Silent	SNP	G	G	C	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	21	41710062	41710062	G	C	SNP	DSCAM	NM_001389.3	human	genbank	58_37c	-1	validated	silent	c.1749	p.L583	0.998	HMMSmart_SM00409,superfamily_Immunoglobulin	HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,HMMPfam_I-set,HMMPfam_ig,superfamily_Immunoglobulin	-	no_errors
EBF2	64641	genome.wustl.edu	37	8	25715895	25715895	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	8	25715895	25715895	A	C	SNP	EBF2	NM_022659.2	human	genbank	58_37c	-1	validated	missense	c.1468	p.L490V	1.000	NULL	HMMSmart_HLH,HMMPfam_TIG,HMMSmart_IPT,superfamily_Ig_E-set,PatternScan_COE	-	no_errors
ECT2	1894	genome.wustl.edu	37	3	172534566	172534566	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	3	172534566	172534566	G	A	SNP	ECT2	NM_018098.4	human	genbank	58_37c	+1	reviewed	missense	c.2501	p.R834K	0.997	NULL	HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_DBL homology domain (DH-domain),PatternScan_DH_1,HMMPfam_BRCT,HMMSmart_SM00292,superfamily_BRCT domain,superfamily_PH domain-like	-	no_errors
EIF3A	8661	genome.wustl.edu	37	10	120797885	120797885	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	10	120797885	120797885	G	A	SNP	EIF3A	NM_003750.2	human	genbank	58_37c	-1	validated	missense	c.3593	p.S1198L	0.015	NULL	HMMPfam_PCI,HMMSmart_SM00088	-	no_errors
ENSG00000239811	0	genome.wustl.edu	37	6	160913973	160913973	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	6	160913973	160913973	G	A	SNP	ENSG00000213071	ENST00000335388	human	ensembl	58_37c	-1	known	5_prime_untranslated_region	c.-160913973	NULL	1.000	-	-	-	no_coding_region
ENSG00000244855	0	genome.wustl.edu	37	9	88880691	88880691	+	RNA	SNP	A	A	C	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	9	88880691	88880691	A	C	SNP	ISCA1	NM_030940.3	human	genbank	58_37c	-1	validated	3_prime_untranslated_region	c.*267	NULL	0.004	-	-	-	no_errors
ENSG00000245894	0	genome.wustl.edu	37	6	31540473	31540473	+	RNA	SNP	C	C	T	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	6	31540473	31540473	C	T	SNP	LTA	NM_000595.2	human	genbank	58_37c	+1	reviewed	intronic	c.1-38	e1-38	0.029	-	-	-	no_errors
ENSG00000246942	0	genome.wustl.edu	37	8	103662321	103662321	+	RNA	SNP	G	G	A	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	8	103662321	103662321	G	A	SNP	KLF10	NM_005655.2	human	genbank	58_37c	-1	validated	3_prime_untranslated_region	c.*39	NULL	0.027	-	-	-	no_errors
ENSG00000247770	0	genome.wustl.edu	37	1	11188191	11188191	+	RNA	SNP	A	A	T	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	1	11188191	11188191	A	T	SNP	MTOR	NM_004958.3	human	genbank	58_37c	-1	reviewed	splice_region	c.5911-8	e42-8	0.001	-	-	-	no_errors
ERCC6	2074	genome.wustl.edu	37	10	50667204	50667204	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	10	50667204	50667204	G	A	SNP	ERCC6	NM_000124.2	human	genbank	58_37c	-1	reviewed	missense	c.4139	p.S1380L	0.000	NULL	HMMPfam_SNF2_N,HMMPfam_Helicase_C,HMMSmart_HELICc,HMMSmart_DEXDc,superfamily_SSF52540	-	no_errors
ERMAP	114625	genome.wustl.edu	37	1	43296636	43296636	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	1	43296636	43296636	A	G	SNP	ERMAP	NM_001017922.1	human	genbank	58_37c	+1	reviewed	missense	c.283	p.K95E	0.280	HMMSmart_IG,HMMPfam_V-set,superfamily_SSF48726	HMMSmart_IG,HMMPfam_SPRY,HMMSmart_PRY,HMMPfam_V-set,HMMSmart_SPRY,superfamily_SSF48726	-	no_errors
ETFB	2109	genome.wustl.edu	37	19	51848506	51848506	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	19	51848506	51848506	C	T	SNP	ETFB	NM_001014763.1	human	genbank	58_37c	-1	reviewed	missense	c.1000	p.E334K	0.988	superfamily_SSF52402	PatternScan_ETF_BETA,HMMPfam_ETF,superfamily_SSF52402	-	no_errors
EXO1	9156	genome.wustl.edu	37	1	242016718	242016718	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	1	242016718	242016718	G	A	SNP	EXO1	NM_006027.4	human	genbank	58_37c	+1	reviewed	missense	c.340	p.E114K	1.000	superfamily_PIN domain-like	HMMPfam_XPG_N,HMMSmart_SM00485,HMMPfam_XPG_I,HMMSmart_SM00484,PatternScan_XPG_2,HMMSmart_SM00279,PatternScan_XPG_1,superfamily_5' to 3' exonuclease C-terminal subdomain,superfamily_PIN domain-like	-	no_errors
FANK1	92565	genome.wustl.edu	37	10	127697019	127697019	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	10	127697019	127697019	G	C	SNP	FANK1	NM_145235.3	human	genbank	58_37c	+1	validated	missense	c.749	p.R250T	0.999	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III	-	no_errors
GBE1	2632	genome.wustl.edu	37	3	81584455	81584455	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	3	81584455	81584455	C	T	SNP	GBE1	ENST00000264326	human	ensembl	58_37c	-1	known	missense	c.1825	p.E609K	1.000	HMMPfam_Alpha-amylase_C,superfamily_Glycosyl hydrolase domain	HMMPfam_CBM_48,HMMPfam_Alpha-amylase,HMMPfam_Alpha-amylase_C,HMMSmart_SM00642,superfamily_E set domains,superfamily_(Trans)glycosidases,superfamily_Glycosyl hydrolase domain	-	no_errors
GOLGA3	2802	genome.wustl.edu	37	12	133367817	133367817	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	12	133367817	133367817	C	A	SNP	GOLGA3	NM_005895.3	human	genbank	58_37c	-1	reviewed	missense	c.2532	p.Q844H	1.000	superfamily_Prefoldin	superfamily_Prefoldin,superfamily_Spectrin repeat	-	no_errors
GOLGA4	2803	genome.wustl.edu	37	3	37357021	37357021	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	3	37357021	37357021	G	A	SNP	GOLGA4	NM_002078.4	human	genbank	58_37c	+1	reviewed	missense	c.1345	p.E449K	1.000	NULL	HMMPfam_GRIP,HMMSmart_SM00755,PatternScan_PHOSPHOPANTETHEINE,superfamily_Prefoldin,superfamily_GRIP domain	-	no_errors
GTPBP1	9567	genome.wustl.edu	37	22	39111931	39111931	+	Nonstop_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	22	39111931	39111931	G	C	SNP	GTPBP1	ENST00000418601	human	ensembl	58_37c	+1	known	nonstop	c.212	p.*71S	1.000	NULL	NULL	-	no_errors
HGSNAT	138050	genome.wustl.edu	37	8	43047544	43047544	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	8	43047544	43047544	G	A	SNP	HGSNAT	NM_152419.2	human	genbank	58_37c	+1	reviewed	missense	c.1348	p.D450N	0.000	HMMPfam_DUF2261	HMMPfam_DUF2261	-	no_errors
HIVEP1	3096	genome.wustl.edu	37	6	12121958	12121958	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	6	12121958	12121958	G	A	SNP	HIVEP1	NM_002114.2	human	genbank	58_37c	+1	validated	missense	c.1930	p.A644T	1.000	NULL	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
HPS3	84343	genome.wustl.edu	37	3	148871407	148871407	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	3	148871407	148871407	G	C	SNP	HPS3	NM_032383.3	human	genbank	58_37c	+1	reviewed	missense	c.1372	p.E458Q	1.000	NULL	NULL	-	no_errors
HSD17B4	3295	genome.wustl.edu	37	5	118835111	118835111	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	5	118835111	118835111	C	G	SNP	HSD17B4	NM_000414.2	human	genbank	58_37c	+1	reviewed	missense	c.1072	p.P358A	1.000	superfamily_SSF54637	HMMPfam_adh_short,PatternScan_ADH_SHORT,HMMPfam_MaoC_dehydratas,HMMPfam_SCP2,superfamily_NAD(P)-bd,superfamily_SCP2,superfamily_SSF54637	-	no_errors
ITSN2	50618	genome.wustl.edu	37	2	24469072	24469072	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	2	24469072	24469072	T	-	DEL	ITSN2	NM_006277.2	human	genbank	58_37c	-1	reviewed	frame_shift_del	c.3503	p.E1168fs	1.000	HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain	HMMPfam_C2,HMMSmart_SM00239,HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_DBL homology domain (DH-domain),HMMSmart_SM00027,HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain,HMMPfam_PH,HMMSmart_SM00233,HMMSmart_SM00054,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMPfam_SH3_2,PatternScan_EF_HAND_1,HMMPfam_efhand,superfamily_EF-hand,superfamily_PH domain-like	-	no_errors
JAK2	3717	genome.wustl.edu	37	9	5029900	5029900	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	9	5029900	5029900	G	T	SNP	JAK2	NM_004972.3	human	genbank	58_37c	+1	reviewed	missense	c.344	p.R115I	1.000	HMMSmart_B41	HMMPfam_SH2,HMMSmart_SH2,HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,PatternScan_PROTEIN_KINASE_TYR,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,PatternScan_FERM_1,PatternScan_FERM_2,HMMSmart_B41,superfamily_SSF55550	-	no_errors
KCNK9	51305	genome.wustl.edu	37	8	140631236	140631255	+	Frame_Shift_Del	DEL	CTCGCCCAGGCTCTGGAACA	CTCGCCCAGGCTCTGGAACA	-	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	CTCGCCCAGGCTCTGGAACA	CTCGCCCAGGCTCTGGAACA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	8	140631236	140631255	CTCGCCCAGGCTCTGGAACA	-	DEL	KCNK9	NM_016601.2	human	genbank	58_37c	-1	reviewed	frame_shift_del	c.390_371	p.M124fs	1.000:1.000:1.000:0.999:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000	HMMPfam_Ion_trans_2,superfamily_SSF81324	HMMPfam_Ion_trans_2,superfamily_SSF81324	-	no_errors
KLRC3	3823	genome.wustl.edu	37	12	10570980	10570980	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	12	10570980	10570980	G	C	SNP	KLRC3	NM_007333.2	human	genbank	58_37c	-1	reviewed	missense	c.449	p.S150C	0.006	HMMPfam_Lectin_C,HMMSmart_SM00034,superfamily_C-type lectin-like	HMMPfam_Lectin_C,HMMSmart_SM00034,superfamily_C-type lectin-like	-	no_errors
KRTAP5-10	387273	genome.wustl.edu	37	11	71276947	71276947	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	11	71276947	71276947	G	A	SNP	KRTAP5-10	NM_001012710.1	human	genbank	58_37c	+1	validated	missense	c.314	p.G105D	0.904	NULL	PatternScan_VWFC_1,PatternScan_MOLYBDOPTERIN_PROK_1	-	no_errors
LAMA5	3911	genome.wustl.edu	37	20	60900388	60900388	+	Missense_Mutation	SNP	C	C	T	rs142055388	byFrequency	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	20	60900388	60900388	C	T	SNP	LAMA5	NM_005560.3	human	genbank	58_37c	-1	reviewed	missense	c.5513	p.R1838Q	0.031	PatternScan_EGF_LAM_1,PatternScan_EGF_1,superfamily_EGF/Laminin	HMMPfam_Laminin_B,PatternScan_TNFR_NGFR_1,HMMSmart_SM00282,HMMPfam_Laminin_EGF,HMMSmart_SM00180,PatternScan_EGF_LAM_1,HMMSmart_SM00181,HMMPfam_Laminin_N,HMMSmart_SM00136,superfamily_Galactose-binding domain-like,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_I,HMMPfam_Laminin_II,HMMPfam_Laminin_G_2,PatternScan_EGF_1,PatternScan_EGF_2,HMMSmart_SM00281,superfamily_EGF/Laminin	-	no_errors
LAYN	143903	genome.wustl.edu	37	11	111414805	111414805	+	Silent	SNP	G	G	C	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	11	111414805	111414805	G	C	SNP	LAYN	NM_178834.3	human	genbank	58_37c	+1	provisional	silent	c.243	p.L81	0.992	HMMPfam_Lectin_C,HMMSmart_CLECT,superfamily_C-type_lectin_fold	HMMPfam_Lectin_C,HMMSmart_CLECT,superfamily_C-type_lectin_fold	-	no_errors
LOC100129085	0	genome.wustl.edu	37	19	38184299	38184299	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	19	38184299	38184299	G	C	SNP	LOC100129085	XM_001720598.1	human	genbank	58_37c	-1	model	missense	c.167	p.S56C	0.275	NULL	NULL	-	no_errors
LOC100289027	0	genome.wustl.edu	37	9	45363578	45363578	+	Missense_Mutation	SNP	C	C	T	rs28520514	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	9	45363578	45363578	C	T	SNP	LOC100289027	XM_002344254.1	human	genbank	58_37c	+1	model	missense	c.98	p.P33L	0.077	HMMPfam_CDK2AP	HMMPfam_CDK2AP	-	no_errors
LOC728416	728416	genome.wustl.edu	37	7	56804101	56804101	+	Missense_Mutation	SNP	A	A	C	rs144059673	by1000genomes	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	7	56804101	56804101	A	C	SNP	LOC728416	XM_001127426.2	human	genbank	58_37c	-1	model	missense	c.183	p.F61L	0.064	HMMPfam_TMA7	HMMPfam_TMA7	-	no_errors
LOC728416	728416	genome.wustl.edu	37	7	56804239	56804239	+	Silent	SNP	G	G	C	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	7	56804239	56804239	G	C	SNP	LOC728416	XM_001127426.2	human	genbank	58_37c	-1	model	silent	c.45	p.P15	0.359	HMMPfam_TMA7	HMMPfam_TMA7	-	no_errors
LPO	4025	genome.wustl.edu	37	17	56329630	56329630	+	Nonsense_Mutation	SNP	A	A	T	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	17	56329630	56329630	A	T	SNP	LPO	NM_006151.2	human	genbank	58_37c	+1	reviewed	nonsense	c.868	p.K290*	0.000	HMMPfam_An_peroxidase,superfamily_Peroxidase_super	HMMPfam_An_peroxidase,superfamily_Peroxidase_super,PatternScan_PEROXIDASE_1,PatternScan_PEROXIDASE_2	-	no_errors
LRCH1	23143	genome.wustl.edu	37	13	47262104	47262104	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	13	47262104	47262104	G	A	SNP	LRCH1	NM_015116.2	human	genbank	58_37c	+1	reviewed	missense	c.940	p.V314M	0.630	NULL	HMMPfam_LRR_1,HMMPfam_CH,HMMSmart_SM00033,PatternScan_PTS_HPR_SER,HMMSmart_SM00369,superfamily_Calponin-homology domain CH-domain,HMMSmart_SM00364,superfamily_L domain-like	-	no_errors
LRRIQ4	344657	genome.wustl.edu	37	3	169539922	169539922	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	3	169539922	169539922	G	C	SNP	LRRIQ4	NM_001080460.1	human	genbank	58_37c	+1	provisional	missense	c.213	p.K71N	0.005	superfamily_SSF52058	HMMPfam_IQ,HMMSmart_IQ,HMMPfam_LRR_1,superfamily_SSF52058	-	no_errors
MAK	4117	genome.wustl.edu	37	6	10802211	10802211	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	6	10802211	10802211	G	C	SNP	MAK	NM_005906.3	human	genbank	58_37c	-1	reviewed	missense	c.745	p.L249V	1.000	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
MAP7D2	256714	genome.wustl.edu	37	X	20030640	20030640	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	X	20030640	20030640	C	T	SNP	MAP7D2	NM_152780.3	human	genbank	58_37c	-1	validated	silent	c.1776	p.L592	1.000	NULL	HMMPfam_MAP7	-	no_errors
MIR548I2	0	genome.wustl.edu	37	4	9557896	9557896	+	RNA	SNP	T	T	G	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	4	9557896	9557896	T	G	SNP	MIR548I2	ENST00000408348	human	ensembl	58_37c	-1	known	rna	NULL	NULL	0.164	-	-	-	no_errors
MPHOSPH8	54737	genome.wustl.edu	37	13	20233249	20233249	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	13	20233249	20233249	C	A	SNP	MPHOSPH8	NM_017520.3	human	genbank	58_37c	+1	validated	missense	c.1691	p.A564E	0.008	superfamily_Ankyrin repeat	HMMPfam_Chromo,HMMSmart_SM00298,PatternScan_CHROMO_1,HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat,superfamily_Chromo domain-like	-	no_errors
MTTP	4547	genome.wustl.edu	37	4	100521863	100521863	+	Silent	SNP	C	C	G	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	4	100521863	100521863	C	G	SNP	MTTP	NM_000253.2	human	genbank	58_37c	+1	reviewed	silent	c.1209	p.P403	0.465	HMMPfam_Vitellogenin_N,HMMSmart_LPD_N,superfamily_LV_superhelical	HMMPfam_Vitellogenin_N,HMMSmart_LPD_N,superfamily_Lipid_transp_b-sht_shell,superfamily_LV_superhelical	-	no_errors
MUC16	94025	genome.wustl.edu	37	19	9067623	9067623	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	19	9067623	9067623	G	A	SNP	MUC16	NM_024690.2	human	genbank	58_37c	-1	validated	missense	c.19823	p.S6608L	0.004	NULL	HMMPfam_SEA,HMMSmart_SM00200,PatternScan_ATPASE_ALPHA_BETA,superfamily_SEA domain	-	no_errors
NCAM1	4684	genome.wustl.edu	37	11	113140962	113140962	+	Silent	SNP	C	C	A	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	11	113140962	113140962	C	A	SNP	NCAM1	ENST00000433634	human	ensembl	58_37c	+1	known	silent	c.549	p.L183	1.000	NULL	HMMPfam_fn3,superfamily_Fibronectin type III	-	no_errors
NDUFA2	4695	genome.wustl.edu	37	5	140025248	140025248	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	5	140025248	140025248	G	C	SNP	NDUFA2	NM_002488.4	human	genbank	58_37c	-1	reviewed	missense	c.224	p.T75R	1.000	HMMPfam_L51_S25_CI-B8	HMMPfam_L51_S25_CI-B8	-	no_errors
OR10V1	390201	genome.wustl.edu	37	11	59480614	59480614	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	11	59480614	59480614	G	A	SNP	OR10V1	NM_001005324.1	human	genbank	58_37c	-1	provisional	silent	c.705	p.R235	0.063	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
OR12D3	81797	genome.wustl.edu	37	6	29342398	29342398	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	6	29342398	29342398	G	C	SNP	OR12D3	NM_030959.2	human	genbank	58_37c	-1	provisional	missense	c.667	p.L223V	0.000	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
OR5M3	219482	genome.wustl.edu	37	11	56237193	56237193	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	11	56237193	56237193	G	C	SNP	OR5M3	NM_001004742.1	human	genbank	58_37c	-1	provisional	missense	c.781	p.P261A	0.422	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
OR6K2	81448	genome.wustl.edu	37	1	158670357	158670357	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	1	158670357	158670357	A	G	SNP	OR6K2	NM_001005279.1	human	genbank	58_37c	-1	provisional	missense	c.86	p.V29A	0.767	superfamily_Family A G protein-coupled receptor-like	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
PAG1	55824	genome.wustl.edu	37	8	81897162	81897162	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	8	81897162	81897162	A	G	SNP	PAG1	NM_018440.3	human	genbank	58_37c	-1	reviewed	missense	c.725	p.V242A	0.015	NULL	NULL	-	no_errors
PAM	5066	genome.wustl.edu	37	5	102237088	102237088	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	5	102237088	102237088	G	C	SNP	PAM	NM_000919.3	human	genbank	58_37c	+1	reviewed	missense	c.239	p.R80P	0.987	HMMPfam_Cu2_monooxygen,superfamily_PHM_PNGase_F	HMMPfam_Cu2_monooxygen,PatternScan_CU2_MONOOXYGENASE_1,HMMPfam_NHL,superfamily_PHM_PNGase_F,HMMPfam_Cu2_monoox_C,PatternScan_CU2_MONOOXYGENASE_2,superfamily_SSF101898	-	no_errors
PAPPA2	60676	genome.wustl.edu	37	1	176811528	176811528	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	1	176811528	176811528	G	A	SNP	PAPPA2	NM_020318.2	human	genbank	58_37c	+1	validated	missense	c.5314	p.A1772T	1.000	NULL	"HMMPfam_Sushi,HMMSmart_SM00032,HMMPfam_Notch,HMMSmart_SM00004,superfamily_Notch domain,PatternScan_N6_MTASE,PatternScan_ZINC_PROTEASE,HMMSmart_SM00560,HMMPfam_Peptidase_M43,superfamily_Concanavalin A-like lectins/glucanases,superfamily_Complement control module/SCR domain,superfamily_Metalloproteases (""zincins"") catalytic domain"	-	no_errors
PASD1	139135	genome.wustl.edu	37	X	150780207	150780207	+	Silent	SNP	T	T	A	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	X	150780207	150780207	T	A	SNP	PASD1	NM_173493.2	human	genbank	58_37c	+1	reviewed	silent	c.189	p.S63	0.001	HMMSmart_SM00091,superfamily_PYP-like sensor domain (PAS domain)	HMMSmart_SM00091,superfamily_PYP-like sensor domain (PAS domain)	-	no_errors
PCDHGA9	56107	genome.wustl.edu	37	5	140783647	140783647	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	5	140783647	140783647	C	T	SNP	PCDHGA9	NM_018921.2	human	genbank	58_37c	+1	reviewed	silent	c.1128	p.S376	0.003	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like	HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin_2,superfamily_Cadherin-like	-	no_errors
PDP1	54704	genome.wustl.edu	37	8	94934414	94934414	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	8	94934414	94934414	C	T	SNP	PDP1	NM_018444.3	human	genbank	58_37c	+1	reviewed	nonsense	c.127	p.R43*	0.678	NULL	PatternScan_PP2C,HMMSmart_SM00332,superfamily_Protein serine/threonine phosphatase 2C catalytic domain,HMMPfam_PP2C	-	no_errors
PGCP	10404	genome.wustl.edu	37	8	97797310	97797310	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	8	97797310	97797310	G	C	SNP	PGCP	NM_016134.2	human	genbank	58_37c	+1	provisional	missense	c.185	p.R62T	1.000	NULL	HMMPfam_Peptidase_M28,superfamily_SSF53187	-	no_errors
PHF15	23338	genome.wustl.edu	37	5	133901983	133901983	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	5	133901983	133901983	G	A	SNP	PHF15	NM_015288.4	human	genbank	58_37c	+1	provisional	missense	c.1147	p.A383T	0.934	NULL	HMMSmart_SM00249,superfamily_FYVE/PHD zinc finger,HMMPfam_EPL1,PatternScan_ZF_PHD_1,HMMPfam_PHD	-	no_errors
PHF8	23133	genome.wustl.edu	37	X	54069105	54069105	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	X	54069105	54069105	G	A	SNP	PHF8	NM_015107.2	human	genbank	58_37c	-1	reviewed	silent	c.57	p.F19	1.000	HMMSmart_SM00249,superfamily_FYVE/PHD zinc finger,PatternScan_EGF_2,PatternScan_ZF_PHD_1,HMMPfam_PHD	HMMSmart_SM00249,HMMSmart_SM00558,superfamily_FYVE/PHD zinc finger,PatternScan_EGF_2,HMMPfam_JmjC,PatternScan_ZF_PHD_1,HMMPfam_PHD,superfamily_Clavaminate synthase-like	-	no_errors
PHLDB1	23187	genome.wustl.edu	37	11	118520793	118520793	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	11	118520793	118520793	G	A	SNP	PHLDB1	NM_001144758.1	human	genbank	58_37c	+1	validated	silent	c.3666	p.L1222	1.000	NULL	HMMPfam_FHA,HMMPfam_PH,HMMSmart_SM00233,superfamily_SMAD/FHA domain,superfamily_PH domain-like	-	no_errors
PKD1L1	168507	genome.wustl.edu	37	7	47897385	47897385	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	7	47897385	47897385	G	A	SNP	PKD1L1	NM_138295.2	human	genbank	58_37c	-1	reviewed	missense	c.4408	p.R1470W	0.330	NULL	HMMPfam_PKD,HMMSmart_SM00089,superfamily_PKD domain,HMMPfam_PLAT,HMMSmart_SM00308,HMMPfam_REJ,superfamily_Lipase/lipooxygenase domain (PLAT/LH2 domain),HMMPfam_PKD_channel	-	no_errors
PLCB1	23236	genome.wustl.edu	37	20	8769095	8769095	+	Splice_Site	SNP	G	G	C	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	20	8769095	8769095	G	C	SNP	PLCB1	NM_015192.2	human	genbank	58_37c	+1	reviewed	splice_site	c.3112-1	e28-1	1.000	-	-	-	no_errors
PLEKHA4	57664	genome.wustl.edu	37	19	49364911	49364911	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	19	49364911	49364911	G	A	SNP	PLEKHA4	NM_020904.2	human	genbank	58_37c	-1	validated	silent	c.231	p.F77	0.995	HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like	HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like	-	no_errors
PRAME	23532	genome.wustl.edu	37	22	22892667	22892667	+	Nonsense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	22	22892667	22892667	G	C	SNP	PRAME	NM_006115.3	human	genbank	58_37c	-1	reviewed	nonsense	c.434	p.S145*	0.002	superfamily_RNI-like	superfamily_RNI-like	-	no_errors
PRKACA	5566	genome.wustl.edu	37	19	14213652	14213652	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	19	14213652	14213652	G	A	SNP	PRKACA	NM_002730.3	human	genbank	58_37c	-1	reviewed	silent	c.312	p.L104	0.985	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase	HMMSmart_SM00133,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
QSER1	79832	genome.wustl.edu	37	11	32976846	32976846	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	11	32976846	32976846	C	A	SNP	QSER1	NM_001076786.1	human	genbank	58_37c	+1	provisional	missense	c.4118	p.A1373D	1.000	NULL	NULL	-	no_errors
RAB11FIP4	84440	genome.wustl.edu	37	17	29858682	29858682	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	17	29858682	29858682	C	T	SNP	RAB11FIP4	NM_032932.3	human	genbank	58_37c	+1	validated	nonsense	c.1846	p.Q616*	1.000	HMMPfam_RBD-FIP	HMMPfam_RBD-FIP,superfamily_EF-hand	-	no_errors
RAI2	10742	genome.wustl.edu	37	X	17818739	17818739	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	X	17818739	17818739	T	G	SNP	RAI2	NM_021785.4	human	genbank	58_37c	-1	reviewed	missense	c.1392	p.K464N	1.000	NULL	NULL	-	no_errors
RALBP1	10928	genome.wustl.edu	37	18	9533749	9533749	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	18	9533749	9533749	C	T	SNP	RALBP1	NM_006788.3	human	genbank	58_37c	+1	validated	silent	c.1626	p.S542	0.378	NULL	HMMPfam_RhoGAP,HMMSmart_RhoGAP,superfamily_Rho_GAP	-	no_errors
RCBTB1	55213	genome.wustl.edu	37	13	50141327	50141327	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	13	50141327	50141327	G	A	SNP	RCBTB1	NM_018191.3	human	genbank	58_37c	-1	reviewed	missense	c.89	p.S30L	1.000	superfamily_RCC1/BLIP-II	HMMSmart_BTB,HMMPfam_RCC1,PatternScan_RCC1_1,PatternScan_RCC1_2,superfamily_RCC1/BLIP-II,superfamily_BTB/POZ_fold,HMMPfam_BTB	-	no_errors
RGPD4	285190	genome.wustl.edu	37	2	108487659	108487659	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	2	108487659	108487659	C	T	SNP	RGPD4	NM_182588.2	human	genbank	58_37c	+1	validated	silent	c.3199	p.L1067	1.000	HMMPfam_Ran_BP1,HMMSmart_RanBD,superfamily_SSF50729	HMMPfam_Ran_BP1,HMMSmart_RanBD,HMMPfam_GRIP,HMMSmart_Grip,HMMPfam_TPR_1,superfamily_SSF48452,superfamily_SSF50729	-	no_errors
RNF138	51444	genome.wustl.edu	37	18	29691779	29691779	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	18	29691779	29691779	G	A	SNP	RNF138	NM_016271.3	human	genbank	58_37c	+1	reviewed	missense	c.173	p.R58H	1.000	superfamily_RING/U-box	HMMSmart_SM00184,HMMPfam_zf-C3HC4,superfamily_RING/U-box	-	no_errors
RXFP4	339403	genome.wustl.edu	37	1	155912498	155912498	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	1	155912498	155912498	C	A	SNP	RXFP4	NM_181885.2	human	genbank	58_37c	+1	validated	missense	c.998	p.P333H	0.007	superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
S100A6	6277	genome.wustl.edu	37	1	153507273	153507273	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	1	153507273	153507273	C	T	SNP	S100A6	NM_014624.3	human	genbank	58_37c	-1	reviewed	missense	c.172	p.E58K	0.971	PatternScan_S100_CABP,HMMPfam_efhand,superfamily_SSF47473	PatternScan_S100_CABP,HMMPfam_S_100,PatternScan_EF_HAND_1,HMMPfam_efhand,superfamily_SSF47473	-	no_errors
SBDS	51119	genome.wustl.edu	37	7	66453378	66453380	+	In_Frame_Del	DEL	CTT	CTT	-	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	CTT	CTT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	7	66453378	66453380	CTT	-	DEL	SBDS	NM_016038.2	human	genbank	58_37c	-1	reviewed	in_frame_del	c.733_731	p.E244in_frame_del	1.000:1.000:1.000	NULL	PatternScan_UPF0023,HMMPfam_SBDS_C,HMMPfam_SBDS,superfamily_FYSH domain,superfamily_Hypothetical protein AF0491 middle domain	-	no_errors
SBF2	81846	genome.wustl.edu	37	11	10024173	10024173	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	11	10024173	10024173	G	A	SNP	SBF2	NM_030962.3	human	genbank	58_37c	-1	reviewed	missense	c.683	p.S228F	1.000	HMMPfam_DENN,HMMSmart_SM00799	HMMPfam_DENN,HMMSmart_SM00799,HMMPfam_PH,HMMSmart_SM00233,HMMPfam_GRAM,HMMSmart_SM00568,HMMPfam_dDENN,HMMSmart_SM00801,HMMPfam_uDENN,HMMSmart_SM00800,HMMPfam_Myotub-related,superfamily_PH domain-like,superfamily_(Phosphotyrosine protein) phosphatases II	-	no_errors
SERPINA7	6906	genome.wustl.edu	37	X	105278294	105278294	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	X	105278294	105278294	G	A	SNP	SERPINA7	NM_000354.5	human	genbank	58_37c	-1	reviewed	nonsense	c.976	p.Q326*	0.000	HMMPfam_Serpin,HMMSmart_SERPIN,superfamily_Prot_inh_serpin	HMMPfam_Serpin,HMMSmart_SERPIN,PatternScan_SERPIN,superfamily_Prot_inh_serpin	-	no_errors
SFRS15	57466	genome.wustl.edu	37	21	33073365	33073365	+	Silent	SNP	T	T	C	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	21	33073365	33073365	T	C	SNP	SFRS15	NM_020706.2	human	genbank	58_37c	-1	reviewed	silent	c.720	p.Q240	0.867	NULL	HMMPfam_RRM_1,HMMSmart_SM00360,HMMSmart_SM00582,HMMPfam_DUF618,superfamily_ENTH/VHS domain,superfamily_RNA-binding domain RBD	-	no_errors
SH3BP4	23677	genome.wustl.edu	37	2	235951351	235951351	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	2	235951351	235951351	G	A	SNP	SH3BP4	NM_014521.2	human	genbank	58_37c	+1	reviewed	silent	c.1938	p.P646	0.003	NULL	HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain,HMMPfam_SH3_2	-	no_errors
SLC12A8	84561	genome.wustl.edu	37	3	124826851	124826851	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	3	124826851	124826851	C	T	SNP	SLC12A8	NM_024628.5	human	genbank	58_37c	-1	validated	silent	c.1179	p.L393	1.000	HMMPfam_AA_permease	HMMPfam_AA_permease	-	no_errors
SLC17A6	57084	genome.wustl.edu	37	11	22397543	22397543	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	11	22397543	22397543	C	T	SNP	SLC17A6	NM_020346.2	human	genbank	58_37c	+1	validated	missense	c.1190	p.A397V	1.000	HMMPfam_MFS_1,superfamily_MFS_gen_substrate_transporter	HMMPfam_MFS_1,superfamily_MFS_gen_substrate_transporter	-	no_errors
SMYD4	114826	genome.wustl.edu	37	17	1703215	1703215	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	17	1703215	1703215	C	T	SNP	SMYD4	NM_052928.2	human	genbank	58_37c	-1	validated	silent	c.1473	p.A491	0.983	superfamily_SET domain	HMMPfam_zf-MYND,PatternScan_ZF_MYND_1,superfamily_TPR-like,superfamily_SET domain	-	no_errors
SPATA2	9825	genome.wustl.edu	37	20	48523073	48523073	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	20	48523073	48523073	C	G	SNP	SPATA2	NM_001135773.1	human	genbank	58_37c	-1	validated	missense	c.646	p.E216Q	0.995	NULL	NULL	-	no_errors
STX17	55014	genome.wustl.edu	37	9	102713416	102713416	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	9	102713416	102713416	G	A	SNP	STX17	NM_017919.2	human	genbank	58_37c	+1	validated	silent	c.264	p.K88	1.000	superfamily_t-snare	HMMPfam_SNARE,HMMSmart_t_SNARE,PatternScan_SYNTAXIN,superfamily_t-snare	-	no_errors
STXBP1	6812	genome.wustl.edu	37	9	130423461	130423461	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	9	130423461	130423461	G	A	SNP	STXBP1	NM_003165.3	human	genbank	58_37c	+1	reviewed	missense	c.406	p.A136T	1.000	HMMPfam_Sec1,superfamily_Sec1/munc18-like (SM) proteins	HMMPfam_Sec1,superfamily_Sec1/munc18-like (SM) proteins	-	no_errors
SYNE1	23345	genome.wustl.edu	37	6	152655294	152655294	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	6	152655294	152655294	T	A	SNP	SYNE1	NM_182961.2	human	genbank	58_37c	-1	reviewed	missense	c.12643	p.N4215Y	0.892	HMMPfam_Spectrin,superfamily_Spectrin repeat	PatternScan_ACTININ_1,PatternScan_ACTININ_2,HMMPfam_CH,HMMSmart_SM00033,HMMPfam_Spectrin,HMMPfam_KASH,superfamily_Calponin-homology domain CH-domain,HMMSmart_SM00150,superfamily_Spectrin repeat	-	no_errors
TCHH	7062	genome.wustl.edu	37	1	152082392	152082392	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	1	152082392	152082392	T	C	SNP	TCHH	NM_007113.2	human	genbank	58_37c	-1	provisional	missense	c.3301	p.R1101G	0.000	NULL	PatternScan_S100_CABP,HMMPfam_S_100,PatternScan_EF_HAND_1,superfamily_SSF47473	-	no_errors
TEX15	56154	genome.wustl.edu	37	8	30700081	30700081	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	8	30700081	30700081	G	A	SNP	TEX15	NM_031271.3	human	genbank	58_37c	-1	validated	silent	c.6453	p.C2151	0.007	NULL	NULL	-	no_errors
TG	7038	genome.wustl.edu	37	8	133899016	133899016	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	8	133899016	133899016	C	G	SNP	TG	NM_003235.4	human	genbank	58_37c	+1	reviewed	missense	c.1399	p.L467V	1.000	NULL	HMMPfam_Thyroglobulin_1,HMMSmart_SM00211,PatternScan_THYROGLOBULIN_1_1,superfamily_Thyroglobulin type-1 domain,HMMPfam_COesterase,HMMPfam_GCC2_GCC3,PatternScan_CARBOXYLESTERASE_B_2,superfamily_alpha/beta-Hydrolases,superfamily_TNF receptor-like	-	no_errors
TIAM1	7074	genome.wustl.edu	37	21	32492859	32492859	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	21	32492859	32492859	G	A	SNP	TIAM1	NM_003253.2	human	genbank	58_37c	-1	validated	nonsense	c.4603	p.Q1535*	0.992	NULL	HMMPfam_RhoGEF,HMMSmart_RhoGEF,superfamily_DH-domain,PatternScan_DH_1,HMMPfam_PDZ,HMMSmart_PDZ,superfamily_PDZ,HMMPfam_PH,HMMSmart_PH,HMMPfam_RBD,HMMSmart_RBD,superfamily_SSF50729	-	no_errors
TMCC1	23023	genome.wustl.edu	37	3	129389511	129389511	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	3	129389511	129389511	G	C	SNP	TMCC1	NM_001017395.3	human	genbank	58_37c	-1	validated	missense	c.1173	p.D391E	1.000	HMMPfam_Tmemb_cc2	HMMPfam_Tmemb_cc2	-	no_errors
TMEM50A	23585	genome.wustl.edu	37	1	25667009	25667009	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	1	25667009	25667009	C	T	SNP	TMEM50A	NM_014313.2	human	genbank	58_37c	+1	reviewed	missense	c.32	p.S11L	1.000	HMMPfam_UPF0220	HMMPfam_UPF0220	-	no_errors
TNPO3	23534	genome.wustl.edu	37	7	128658066	128658066	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	7	128658066	128658066	G	A	SNP	TNPO3	NM_012470.2	human	genbank	58_37c	-1	validated	missense	c.266	p.S89L	1.000	superfamily_ARM repeat	HMMPfam_Xpo1,superfamily_ARM repeat	-	no_errors
TP53	7157	genome.wustl.edu	37	17	7577129	7577129	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	17	7577129	7577129	A	G	SNP	TP53	NM_000546.4	human	genbank	58_37c	-1	reviewed	missense	c.809	p.F270S	1.000	superfamily_p53-like transcription factors,HMMPfam_P53	PatternScan_P53,superfamily_p53-like transcription factors,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain,HMMPfam_P53,HMMPfam_P53_TAD	-	no_errors
TRIM10	10107	genome.wustl.edu	37	6	30124770	30124770	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	6	30124770	30124770	G	A	SNP	TRIM10	NM_006778.3	human	genbank	58_37c	-1	validated	missense	c.841	p.R281W	0.999	NULL	HMMPfam_zf-B_box,HMMSmart_SM00336,HMMSmart_SM00184,HMMPfam_SPRY,HMMSmart_SM00589,PatternScan_ZF_RING_1,HMMSmart_SM00449,HMMPfam_zf-C3HC4,superfamily_RING/U-box	-	no_errors
TRIM13	10206	genome.wustl.edu	37	13	50587274	50587275	+	Frame_Shift_Del	DEL	TT	TT	-	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	TT	TT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	13	50587274	50587275	TT	-	DEL	TRIM13	NM_001007278.1	human	genbank	58_37c	+1	reviewed	frame_shift_del	c.1207_1208	p.F403fs	1.000:1.000	NULL	HMMPfam_zf-B_box,HMMSmart_BBOX,HMMSmart_RING,PatternScan_ZF_RING_1,HMMPfam_zf-C3HC4,superfamily_SSF57845,superfamily_SSF57850	-	no_errors
TRIM21	6737	genome.wustl.edu	37	11	4411449	4411449	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	11	4411449	4411449	C	T	SNP	TRIM21	NM_003141.3	human	genbank	58_37c	-1	reviewed	missense	c.191	p.R64Q	0.008	superfamily_SSF57850	HMMPfam_zf-B_box,HMMSmart_BBOX,HMMSmart_RING,HMMPfam_SPRY,HMMSmart_PRY,PatternScan_ZF_RING_1,HMMSmart_SPRY,HMMPfam_zf-C3HC4,superfamily_SSF57850	-	no_errors
TRIO	7204	genome.wustl.edu	37	5	14399176	14399176	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	5	14399176	14399176	G	A	SNP	TRIO	NM_007118.2	human	genbank	58_37c	+1	validated	silent	c.4611	p.L1537	1.000	HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like	HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_DBL homology domain (DH-domain),HMMSmart_SM00219,HMMSmart_SM00516,superfamily_CRAL/TRIO domain,HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain,HMMPfam_PH,HMMSmart_SM00233,HMMPfam_Spectrin,HMMSmart_SM00220,HMMSmart_SM00408,HMMSmart_SM00409,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),HMMPfam_I-set,HMMPfam_Pkinase,HMMSmart_SM00150,superfamily_Spectrin repeat,superfamily_Immunoglobulin,superfamily_PH domain-like	-	no_errors
TRIP13	9319	genome.wustl.edu	37	5	914588	914588	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	5	914588	914588	C	G	SNP	TRIP13	NM_004237.3	human	genbank	58_37c	+1	reviewed	missense	c.1029	p.I343M	1.000	HMMPfam_AAA,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMSmart_SM00382,HMMPfam_AAA,PatternScan_AAA,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
TRPV6	55503	genome.wustl.edu	37	7	142573242	142573242	+	Silent	SNP	G	G	C	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	7	142573242	142573242	G	C	SNP	TRPV6	NM_018646.2	human	genbank	58_37c	-1	validated	silent	c.1101	p.L367	0.000	NULL	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat,HMMPfam_Ion_trans	-	no_errors
TTN	7273	genome.wustl.edu	37	2	179612700	179612700	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	2	179612700	179612700	C	T	SNP	TTN	NM_133379.3	human	genbank	58_37c	-1	reviewed	silent	c.14427	p.L4809	0.000	NULL	PatternScan_THIOL_PROTEASE_HIS,PatternScan_IG_MHC,HMMSmart_IGc2,HMMSmart_IG,HMMPfam_I-set,HMMPfam_ig,HMMPfam_Titin_Z,superfamily_SSF48726	-	no_errors
UBTD1	80019	genome.wustl.edu	37	10	99330208	99330208	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	10	99330208	99330208	C	T	SNP	UBTD1	NM_024954.3	human	genbank	58_37c	+1	provisional	silent	c.612	p.L204	1.000	HMMPfam_ubiquitin,HMMSmart_UBQ,superfamily_SSF54236	HMMPfam_ubiquitin,HMMSmart_UBQ,PatternScan_UBIQUITIN_1,superfamily_SSF54236	-	no_errors
UHRF1BP1L	23074	genome.wustl.edu	37	12	100452800	100452800	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	12	100452800	100452800	G	A	SNP	UHRF1BP1L	NM_015054.1	human	genbank	58_37c	-1	validated	missense	c.2255	p.S752L	0.997	NULL	NULL	-	no_errors
WDR49	151790	genome.wustl.edu	37	3	167277905	167277905	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	3	167277905	167277905	G	-	DEL	WDR49	NM_178824.3	human	genbank	58_37c	-1	provisional	frame_shift_del	c.598	p.D201fs	0.992	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40	HMMSmart_SM00320,superfamily_WD40 repeat-like,PatternScan_WD_REPEATS_1,HMMPfam_WD40	-	no_errors
ZCCHC13	389874	genome.wustl.edu	37	X	73524431	73524431	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	X	73524431	73524431	G	A	SNP	ZCCHC13	NM_203303.2	human	genbank	58_37c	+1	reviewed	silent	c.330	p.Q110	1.000	HMMPfam_zf-CCHC,superfamily_SSF57756	HMMPfam_zf-CCHC,HMMSmart_ZnF_C2HC,superfamily_SSF57756	-	no_errors
ZFHX4	79776	genome.wustl.edu	37	8	77764171	77764174	+	Frame_Shift_Del	DEL	AAAA	AAAA	-	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	AAAA	AAAA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	8	77764171	77764174	AAAA	-	DEL	ZFHX4	NM_024721.4	human	genbank	58_37c	+1	validated	frame_shift_del	c.4879_4882	p.K1627fs	1.000:1.000:1.000:1.000	NULL	HMMPfam_Homeobox,HMMSmart_SM00389,HMMSmart_SM00451,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,superfamily_Homeodomain-like,HMMSmart_SM00355,PatternScan_HOMEOBOX_1,PatternScan_SOMATOTROPIN_2,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZNF236	7776	genome.wustl.edu	37	18	74625817	74625817	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	18	74625817	74625817	C	T	SNP	ZNF236	NM_007345.3	human	genbank	58_37c	+1	validated	silent	c.3018	p.S1006	1.000	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZNF253	56242	genome.wustl.edu	37	19	20002371	20002371	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	19	20002371	20002371	C	T	SNP	ZNF253	NM_021047.2	human	genbank	58_37c	+1	provisional	silent	c.315	p.C105	0.033	NULL	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZNF429	353088	genome.wustl.edu	37	19	21719844	21719844	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	19	21719844	21719844	G	A	SNP	ZNF429	NM_001001415.2	human	genbank	58_37c	+1	provisional	missense	c.989	p.S330N	0.003	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
ZNF440	126070	genome.wustl.edu	37	19	11943231	11943231	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	19	11943231	11943231	C	G	SNP	ZNF440	NM_152357.2	human	genbank	58_37c	+1	validated	missense	c.1240	p.H414D	0.776	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
ZNF510	22869	genome.wustl.edu	37	9	99521783	99521783	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	9	99521783	99521783	C	T	SNP	ZNF510	NM_014930.1	human	genbank	58_37c	-1	provisional	silent	c.1329	p.Q443	0.017	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZNF562	54811	genome.wustl.edu	37	19	9764242	9764242	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	19	9764242	9764242	G	C	SNP	ZNF562	NM_001130031.1	human	genbank	58_37c	-1	validated	missense	c.664	p.H222D	0.064	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZNF578	147660	genome.wustl.edu	37	19	53014007	53014007	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	19	53014007	53014007	C	A	SNP	ZNF578	NM_001099694.1	human	genbank	58_37c	+1	validated	missense	c.373	p.H125N	0.000	NULL	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_Multiheme cytochromes,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZNF658	26149	genome.wustl.edu	37	9	40774338	40774338	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	9	40774338	40774338	T	A	SNP	ZNF658	NM_033160.5	human	genbank	58_37c	-1	validated	missense	c.937	p.T313S	0.000	superfamily_C2H2 and C2HC zinc fingers	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZNF776	284309	genome.wustl.edu	37	19	58265573	58265573	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0AW-01A-11W-A071-09	TCGA-BH-A0AW-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	82057159-dd32-49fd-9ee7-82b4668f39c3	959f61e0-33ba-4464-a04a-efd0372eedb5	19	58265573	58265573	C	T	SNP	ZNF776	NM_173632.3	human	genbank	58_37c	+1	validated	missense	c.1075	p.H359Y	0.000	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
