Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ACCN3	0	genome.wustl.edu	37	7	150746033	150746033	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A27A-01A-11D-A167-09	TCGA-C8-A27A-10B-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d0fd3dcc-4ac7-4fe9-9fb8-c0676b6faabb	b3bbaa37-c5ad-44d8-aab3-78472e776a66	7	150746033	150746033	G	A	SNP	ACCN3	NM_020321.2	human	genbank	58_37c	+1	reviewed	missense	c.61	p.A21T	1.000	HMMPfam_ASC	HMMPfam_ASC,PatternScan_ASC	-	no_errors
ALCAM	0	genome.wustl.edu	37	3	105238944	105238944	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A27A-01A-11D-A167-09	TCGA-C8-A27A-10B-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d0fd3dcc-4ac7-4fe9-9fb8-c0676b6faabb	b3bbaa37-c5ad-44d8-aab3-78472e776a66	3	105238944	105238944	G	A	SNP	ALCAM	NM_001627.2	human	genbank	58_37c	+1	validated	missense	c.107	p.G36E	1.000	HMMSmart_SM00409,superfamily_Immunoglobulin	HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_ig,HMMPfam_C2-set_2,superfamily_Immunoglobulin	-	no_errors
ARHGEF10	0	genome.wustl.edu	37	8	1833860	1833860	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-C8-A27A-01A-11D-A167-09	TCGA-C8-A27A-10B-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d0fd3dcc-4ac7-4fe9-9fb8-c0676b6faabb	b3bbaa37-c5ad-44d8-aab3-78472e776a66	8	1833860	1833860	T	C	SNP	ARHGEF10	NM_014629.2	human	genbank	58_37c	+1	reviewed	missense	c.1169	p.L390S	0.261	superfamily_DH-domain	PatternScan_THIOL_PROTEASE_HIS,HMMPfam_RhoGEF,HMMSmart_RhoGEF,superfamily_DH-domain,superfamily_WD40_like,superfamily_SSF50729	-	no_errors
C8orf34	0	genome.wustl.edu	37	8	69381036	69381036	+	Silent	SNP	C	C	G	novel	unknown	TCGA-C8-A27A-01A-11D-A167-09	TCGA-C8-A27A-10B-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d0fd3dcc-4ac7-4fe9-9fb8-c0676b6faabb	b3bbaa37-c5ad-44d8-aab3-78472e776a66	8	69381036	69381036	C	G	SNP	C8orf34	NM_052958.1	human	genbank	58_37c	+1	predicted	silent	c.384	p.A128	1.000	NULL	NULL	-	no_errors
CDC123	0	genome.wustl.edu	37	10	12259451	12259451	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A27A-01A-11D-A167-09	TCGA-C8-A27A-10B-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d0fd3dcc-4ac7-4fe9-9fb8-c0676b6faabb	b3bbaa37-c5ad-44d8-aab3-78472e776a66	10	12259451	12259451	G	A	SNP	CDC123	NM_006023.2	human	genbank	58_37c	+1	validated	missense	c.425	p.R142H	1.000	HMMPfam_D123	HMMPfam_D123	-	no_errors
DMKN	0	genome.wustl.edu	37	19	36002404	36002404	+	Missense_Mutation	SNP	C	C	T	rs138902616	byFrequency	TCGA-C8-A27A-01A-11D-A167-09	TCGA-C8-A27A-10B-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d0fd3dcc-4ac7-4fe9-9fb8-c0676b6faabb	b3bbaa37-c5ad-44d8-aab3-78472e776a66	19	36002404	36002404	C	T	SNP	DMKN	NM_033317.3	human	genbank	58_37c	-1	reviewed	missense	c.827	p.S276N	0.000	NULL	NULL	-	no_errors
DSG1	0	genome.wustl.edu	37	18	28934500	28934500	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A27A-01A-11D-A167-09	TCGA-C8-A27A-10B-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d0fd3dcc-4ac7-4fe9-9fb8-c0676b6faabb	b3bbaa37-c5ad-44d8-aab3-78472e776a66	18	28934500	28934500	G	A	SNP	DSG1	NM_001942.2	human	genbank	58_37c	+1	reviewed	missense	c.2341	p.E781K	1.000	NULL	HMMPfam_Cadherin_C,HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,PatternScan_PHOSPHOPANTETHEINE,superfamily_Cadherin-like	-	no_errors
ENSG00000186082	0	genome.wustl.edu	37	11	35881884	35881884	+	Silent	SNP	G	G	A	novel	unknown	TCGA-C8-A27A-01A-11D-A167-09	TCGA-C8-A27A-10B-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d0fd3dcc-4ac7-4fe9-9fb8-c0676b6faabb	b3bbaa37-c5ad-44d8-aab3-78472e776a66	11	35881884	35881884	G	A	SNP	ENSG00000186082	ENST00000333983	human	ensembl	58_37c	-1	known	silent	c.1167	p.S389	0.989	NULL	HMMPfam_Filament	-	no_errors
ENSG00000211459	0	genome.wustl.edu	37	MT	1282	1282	+	RNA	SNP	G	G	A	novel	unknown	TCGA-C8-A27A-01A-11D-A167-09	TCGA-C8-A27A-10B-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d0fd3dcc-4ac7-4fe9-9fb8-c0676b6faabb	b3bbaa37-c5ad-44d8-aab3-78472e776a66	MT	1282	1282	G	A	SNP	ENSG00000211459	ENST00000389680	human	ensembl	58_37c	+1	known	rna	NULL	NULL	NULL	-	-	-	no_errors
ENSG00000231520	0	genome.wustl.edu	37	10	42380505	42380505	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-C8-A27A-01A-11D-A167-09	TCGA-C8-A27A-10B-01D-A167-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d0fd3dcc-4ac7-4fe9-9fb8-c0676b6faabb	b3bbaa37-c5ad-44d8-aab3-78472e776a66	10	42380505	42380505	A	T	SNP	ENSG00000231520	ENST00000413838	human	ensembl	58_37c	-1	known	missense	c.27	p.N9K	0.000	NULL	NULL	-	no_stop_codon
EPB41L4A	0	genome.wustl.edu	37	5	111615976	111615976	+	Silent	SNP	C	C	T	novel	unknown	TCGA-C8-A27A-01A-11D-A167-09	TCGA-C8-A27A-10B-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d0fd3dcc-4ac7-4fe9-9fb8-c0676b6faabb	b3bbaa37-c5ad-44d8-aab3-78472e776a66	5	111615976	111615976	C	T	SNP	EPB41L4A	NM_022140.3	human	genbank	58_37c	-1	validated	silent	c.249	p.L83	0.996	HMMPfam_FERM_N,PatternScan_FERM_1,HMMSmart_SM00295,superfamily_Ubiquitin-like	HMMPfam_FA,HMMPfam_FERM_N,HMMPfam_FERM_C,PatternScan_FERM_1,PatternScan_FERM_2,HMMPfam_FERM_M,superfamily_Second domain of FERM,HMMSmart_SM00295,superfamily_PH domain-like,superfamily_Ubiquitin-like	-	no_errors
FBXW8	0	genome.wustl.edu	37	12	117448250	117448250	+	Silent	SNP	C	C	T	novel	unknown	TCGA-C8-A27A-01A-11D-A167-09	TCGA-C8-A27A-10B-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d0fd3dcc-4ac7-4fe9-9fb8-c0676b6faabb	b3bbaa37-c5ad-44d8-aab3-78472e776a66	12	117448250	117448250	C	T	SNP	FBXW8	NM_153348.2	human	genbank	58_37c	+1	reviewed	silent	c.1362	p.D454	1.000	HMMSmart_SM00320,superfamily_YVTN repeat-like/Quinoprotein amine dehydrogenase	HMMSmart_SM00320,HMMPfam_F-box,HMMSmart_SM00256,superfamily_YVTN repeat-like/Quinoprotein amine dehydrogenase,PatternScan_WD_REPEATS_1,HMMPfam_WD40,superfamily_F-box domain	-	no_errors
FCAR	0	genome.wustl.edu	37	19	55396901	55396901	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-C8-A27A-01A-11D-A167-09	TCGA-C8-A27A-10B-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d0fd3dcc-4ac7-4fe9-9fb8-c0676b6faabb	b3bbaa37-c5ad-44d8-aab3-78472e776a66	19	55396901	55396901	T	A	SNP	FCAR	NM_002000.2	human	genbank	58_37c	+1	reviewed	missense	c.325	p.F109I	0.007	HMMSmart_SM00409,superfamily_Immunoglobulin	HMMSmart_SM00409,HMMPfam_ig,superfamily_Immunoglobulin	-	no_errors
FILIP1L	0	genome.wustl.edu	37	3	99568867	99568867	+	Silent	SNP	G	G	A	novel	unknown	TCGA-C8-A27A-01A-11D-A167-09	TCGA-C8-A27A-10B-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d0fd3dcc-4ac7-4fe9-9fb8-c0676b6faabb	b3bbaa37-c5ad-44d8-aab3-78472e776a66	3	99568867	99568867	G	A	SNP	FILIP1L	NM_182909.2	human	genbank	58_37c	-1	validated	silent	c.1653	p.T551	0.589	NULL	superfamily_Prefoldin,HMMPfam_CortBP2	-	no_errors
GOLGA6L5	0	genome.wustl.edu	37	15	85055919	85055919	+	RNA	SNP	C	C	T	novel	unknown	TCGA-C8-A27A-01A-11D-A167-09	TCGA-C8-A27A-10B-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d0fd3dcc-4ac7-4fe9-9fb8-c0676b6faabb	b3bbaa37-c5ad-44d8-aab3-78472e776a66	15	85055919	85055919	C	T	SNP	GOLGA6L5	NR_003246.2	human	genbank	58_37c	-1	validated	rna	NULL	NULL	0.302	-	-	-	pseudogene
HOXA13	0	genome.wustl.edu	37	7	27239130	27239130	+	Silent	SNP	G	G	A	novel	unknown	TCGA-C8-A27A-01A-11D-A167-09	TCGA-C8-A27A-10B-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d0fd3dcc-4ac7-4fe9-9fb8-c0676b6faabb	b3bbaa37-c5ad-44d8-aab3-78472e776a66	7	27239130	27239130	G	A	SNP	HOXA13	NM_000522.4	human	genbank	58_37c	-1	reviewed	silent	c.567	p.N189	1.000	NULL	HMMPfam_Homeobox,HMMSmart_SM00389,superfamily_Homeodomain-like,PatternScan_HOMEOBOX_1	-	no_errors
LGALS9	0	genome.wustl.edu	37	17	25965319	25965319	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A27A-01A-11D-A167-09	TCGA-C8-A27A-10B-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d0fd3dcc-4ac7-4fe9-9fb8-c0676b6faabb	b3bbaa37-c5ad-44d8-aab3-78472e776a66	17	25965319	25965319	G	A	SNP	LGALS9	NM_009587.2	human	genbank	58_37c	+1	reviewed	missense	c.70	p.G24S	0.383	HMMPfam_Gal-bind_lectin,HMMSmart_SM00276,superfamily_Concanavalin A-like lectins/glucanases	HMMPfam_Gal-bind_lectin,HMMSmart_SM00276,superfamily_Concanavalin A-like lectins/glucanases	-	no_errors
LOC643699	0	genome.wustl.edu	37	15	30700397	30700397	+	Silent	SNP	C	C	T	novel	unknown	TCGA-C8-A27A-01A-11D-A167-09	TCGA-C8-A27A-10B-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d0fd3dcc-4ac7-4fe9-9fb8-c0676b6faabb	b3bbaa37-c5ad-44d8-aab3-78472e776a66	15	30700397	30700397	C	T	SNP	LOC643699	XM_926998.2	human	genbank	58_37c	-1	model	silent	c.780	p.S260	0.066	NULL	NULL	-	no_errors
LOC646079	0	genome.wustl.edu	37	15	20279359	20279359	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A27A-01A-11D-A167-09	TCGA-C8-A27A-10B-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d0fd3dcc-4ac7-4fe9-9fb8-c0676b6faabb	b3bbaa37-c5ad-44d8-aab3-78472e776a66	15	20279359	20279359	C	T	SNP	LOC646079	XM_929039.4	human	genbank	58_37c	-1	model	missense	c.229	p.G77S	0.078	superfamily_SH3-domain	HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain	-	no_errors
LOC729057	0	genome.wustl.edu	37	22	16123616	16123616	+	RNA	SNP	C	C	T	novel	unknown	TCGA-C8-A27A-01A-11D-A167-09	TCGA-C8-A27A-10B-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d0fd3dcc-4ac7-4fe9-9fb8-c0676b6faabb	b3bbaa37-c5ad-44d8-aab3-78472e776a66	22	16123616	16123616	C	T	SNP	LOC729057	XR_042044.2	human	genbank	58_37c	+1	model	rna	NULL	NULL	0.992	-	-	-	no_errors
MCF2L	0	genome.wustl.edu	37	13	113750743	113750743	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A27A-01A-11D-A167-09	TCGA-C8-A27A-10B-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d0fd3dcc-4ac7-4fe9-9fb8-c0676b6faabb	b3bbaa37-c5ad-44d8-aab3-78472e776a66	13	113750743	113750743	G	A	SNP	MCF2L	NM_001112732.1	human	genbank	58_37c	+1	validated	missense	c.3305	p.R1102H	0.000	HMMSmart_SM00326,superfamily_SH3-domain,HMMPfam_SH3_2	HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_DBL homology domain (DH-domain),HMMSmart_SM00516,PatternScan_DH_1,HMMSmart_SM00326,superfamily_SH3-domain,HMMPfam_PH,HMMSmart_SM00233,HMMPfam_Spectrin,HMMPfam_SH3_2,HMMSmart_SM00150,superfamily_Spectrin repeat,superfamily_PH domain-like	-	no_errors
MED12	0	genome.wustl.edu	37	X	70344921	70344921	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-C8-A27A-01A-11D-A167-09	TCGA-C8-A27A-10B-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d0fd3dcc-4ac7-4fe9-9fb8-c0676b6faabb	b3bbaa37-c5ad-44d8-aab3-78472e776a66	X	70344921	70344921	G	T	SNP	MED12	NM_005120.2	human	genbank	58_37c	+1	reviewed	missense	c.2151	p.K717N	0.966	NULL	HMMPfam_Med12	-	no_errors
NCL	0	genome.wustl.edu	37	2	232320764	232320764	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A27A-01A-11D-A167-09	TCGA-C8-A27A-10B-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d0fd3dcc-4ac7-4fe9-9fb8-c0676b6faabb	b3bbaa37-c5ad-44d8-aab3-78472e776a66	2	232320764	232320764	G	A	SNP	NCL	NM_005381.2	human	genbank	58_37c	-1	reviewed	missense	c.1789	p.R597W	0.000	HMMPfam_RRM_1,HMMSmart_RRM,superfamily_SSF54928	HMMPfam_RRM_1,HMMSmart_RRM,HMMPfam_FYDLN_acid,superfamily_SSF54928	-	no_errors
OR2L1P	0	genome.wustl.edu	37	1	248154156	248154156	+	RNA	SNP	G	G	A	novel	unknown	TCGA-C8-A27A-01A-11D-A167-09	TCGA-C8-A27A-10B-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d0fd3dcc-4ac7-4fe9-9fb8-c0676b6faabb	b3bbaa37-c5ad-44d8-aab3-78472e776a66	1	248154156	248154156	G	A	SNP	OR2L1P	NR_002145.1	human	genbank	58_37c	+1	provisional	rna	NULL	NULL	0.014	-	-	-	pseudogene
OVOS2	0	genome.wustl.edu	37	12	31270080	31270081	+	In_Frame_Ins	INS	-	-	AAA	novel	unknown	TCGA-C8-A27A-01A-11D-A167-09	TCGA-C8-A27A-10B-01D-A167-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d0fd3dcc-4ac7-4fe9-9fb8-c0676b6faabb	b3bbaa37-c5ad-44d8-aab3-78472e776a66	12	31270080	31270081	-	AAA	INS	OVOS2	XM_002343151.1	human	genbank	58_37c	-1	model	in_frame_ins	c.3789_3788	p.1264in_frame_insF	0.995:0.975	NULL	HMMPfam_A2M,HMMPfam_A2M_N,PatternScan_PHOSPHOPANTETHEINE,superfamily_Terpenoid cyclases/Protein prenyltransferases,HMMPfam_A2M_recep,superfamily_Alpha-macroglobulin receptor domain,HMMPfam_A2M_N_2,HMMPfam_A2M_comp,HMMPfam_Thiol-ester_cl	-	no_errors
P2RY11	0	genome.wustl.edu	37	19	10224638	10224638	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-C8-A27A-01A-11D-A167-09	TCGA-C8-A27A-10B-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d0fd3dcc-4ac7-4fe9-9fb8-c0676b6faabb	b3bbaa37-c5ad-44d8-aab3-78472e776a66	19	10224638	10224638	G	C	SNP	P2RY11	NM_002566.4	human	genbank	58_37c	+1	reviewed	missense	c.349	p.V117L	0.879	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
PGR	0	genome.wustl.edu	37	11	100962590	100962590	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-C8-A27A-01A-11D-A167-09	TCGA-C8-A27A-10B-01D-A167-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d0fd3dcc-4ac7-4fe9-9fb8-c0676b6faabb	b3bbaa37-c5ad-44d8-aab3-78472e776a66	11	100962590	100962590	A	G	SNP	PGR	NM_000926.4	human	genbank	58_37c	-1	reviewed	missense	c.1807	p.C603R	1.000	HMMPfam_zf-C4,HMMSmart_SM00399,superfamily_Glucocorticoid receptor-like (DNA-binding domain)	HMMPfam_Prog_receptor,HMMPfam_Hormone_recep,HMMSmart_SM00430,HMMPfam_zf-C4,HMMSmart_SM00399,PatternScan_NUCLEAR_REC_DBD_1,superfamily_Nuclear receptor ligand-binding domain,superfamily_Glucocorticoid receptor-like (DNA-binding domain)	-	no_errors
POP1	0	genome.wustl.edu	37	8	99168386	99168386	+	Nonsense_Mutation	SNP	C	C	G	novel	unknown	TCGA-C8-A27A-01A-11D-A167-09	TCGA-C8-A27A-10B-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d0fd3dcc-4ac7-4fe9-9fb8-c0676b6faabb	b3bbaa37-c5ad-44d8-aab3-78472e776a66	8	99168386	99168386	C	G	SNP	POP1	NM_015029.2	human	genbank	58_37c	+1	reviewed	nonsense	c.2166	p.Y722*	0.000	NULL	HMMPfam_POP1,HMMPfam_POPLD	-	no_errors
PRUNE2	0	genome.wustl.edu	37	9	79319916	79319916	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-C8-A27A-01A-11D-A167-09	TCGA-C8-A27A-10B-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d0fd3dcc-4ac7-4fe9-9fb8-c0676b6faabb	b3bbaa37-c5ad-44d8-aab3-78472e776a66	9	79319916	79319916	C	G	SNP	PRUNE2	NM_015225.2	human	genbank	58_37c	-1	validated	missense	c.7274	p.R2425T	0.021	NULL	HMMSmart_SEC14,superfamily_CRAL_TRIO_C,superfamily_Ferritin/RR_like,superfamily_SSF64182	-	no_errors
RALGAPA2	0	genome.wustl.edu	37	20	20527462	20527462	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A27A-01A-11D-A167-09	TCGA-C8-A27A-10B-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d0fd3dcc-4ac7-4fe9-9fb8-c0676b6faabb	b3bbaa37-c5ad-44d8-aab3-78472e776a66	20	20527462	20527462	C	T	SNP	RALGAPA2	ENST00000430436	human	ensembl	58_37c	-1	known	missense	c.2621	p.R874Q	0.980	NULL	HMMPfam_Rap_GAP,superfamily_Rap/Ran-GAP (Pfam 02145)	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region
RAPGEF1	0	genome.wustl.edu	37	9	134501721	134501721	+	Silent	SNP	C	C	T	novel	unknown	TCGA-C8-A27A-01A-11D-A167-09	TCGA-C8-A27A-10B-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d0fd3dcc-4ac7-4fe9-9fb8-c0676b6faabb	b3bbaa37-c5ad-44d8-aab3-78472e776a66	9	134501721	134501721	C	T	SNP	RAPGEF1	NM_198679.1	human	genbank	58_37c	-1	reviewed	silent	c.1293	p.P431	0.079	NULL	HMMPfam_RasGEF_N,HMMSmart_RasGEFN,HMMPfam_RasGEF,HMMSmart_RasGEF,superfamily_Ras_GEF,PatternScan_RASGEF	-	no_errors
RTL1	0	genome.wustl.edu	37	14	101349800	101349800	+	Silent	SNP	G	G	A	novel	unknown	TCGA-C8-A27A-01A-11D-A167-09	TCGA-C8-A27A-10B-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d0fd3dcc-4ac7-4fe9-9fb8-c0676b6faabb	b3bbaa37-c5ad-44d8-aab3-78472e776a66	14	101349800	101349800	G	A	SNP	RTL1	NM_001134888.2	human	genbank	58_37c	-1	reviewed	silent	c.1326	p.F442	0.595	superfamily_Acid proteases	HMMPfam_Retrotrans_gag,superfamily_Acid proteases,superfamily_DNA/RNA polymerases	-	no_errors
SLC6A15	0	genome.wustl.edu	37	12	85270296	85270296	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A27A-01A-11D-A167-09	TCGA-C8-A27A-10B-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d0fd3dcc-4ac7-4fe9-9fb8-c0676b6faabb	b3bbaa37-c5ad-44d8-aab3-78472e776a66	12	85270296	85270296	G	A	SNP	SLC6A15	NM_182767.4	human	genbank	58_37c	-1	validated	missense	c.847	p.R283C	1.000	HMMPfam_SNF	HMMPfam_SNF,PatternScan_NA_NEUROTRAN_SYMP_1,PatternScan_NA_NEUROTRAN_SYMP_2	-	no_errors
TFPI2	0	genome.wustl.edu	37	7	93519525	93519525	+	Silent	SNP	C	C	A	novel	unknown	TCGA-C8-A27A-01A-11D-A167-09	TCGA-C8-A27A-10B-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d0fd3dcc-4ac7-4fe9-9fb8-c0676b6faabb	b3bbaa37-c5ad-44d8-aab3-78472e776a66	7	93519525	93519525	C	A	SNP	TFPI2	NM_006528.2	human	genbank	58_37c	-1	provisional	silent	c.195	p.L65	0.001	HMMPfam_Kunitz_BPTI,HMMSmart_KU,PatternScan_BPTI_KUNITZ_1,superfamily_Prot_inh_Kunz-m	HMMPfam_Kunitz_BPTI,HMMSmart_KU,PatternScan_BPTI_KUNITZ_1,superfamily_Prot_inh_Kunz-m	-	no_errors
TNXB	0	genome.wustl.edu	37	6	32029275	32029275	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-C8-A27A-01A-11D-A167-09	TCGA-C8-A27A-10B-01D-A167-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d0fd3dcc-4ac7-4fe9-9fb8-c0676b6faabb	b3bbaa37-c5ad-44d8-aab3-78472e776a66	6	32029275	32029275	A	G	SNP	TNXB	NM_019105.6	human	genbank	58_37c	-1	reviewed	missense	c.7391	p.V2464A	0.718	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III	HMMPfam_Fibrinogen_C,HMMSmart_SM00186,PatternScan_FIBRIN_AG_C_DOMAIN,superfamily_Fibrinogen C-terminal domain-like,HMMPfam_fn3,HMMSmart_SM00060,HMMSmart_SM00181,superfamily_Fibronectin type III,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF_2,superfamily_EGF/Laminin	-	no_errors
TP53	0	genome.wustl.edu	37	17	7578253	7578253	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-C8-A27A-01A-11D-A167-09	TCGA-C8-A27A-10B-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d0fd3dcc-4ac7-4fe9-9fb8-c0676b6faabb	b3bbaa37-c5ad-44d8-aab3-78472e776a66	17	7578253	7578253	C	A	SNP	TP53	NM_000546.4	human	genbank	58_37c	-1	reviewed	missense	c.596	p.G199V	1.000	superfamily_p53-like transcription factors,HMMPfam_P53	PatternScan_P53,superfamily_p53-like transcription factors,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain,HMMPfam_P53,HMMPfam_P53_TAD	-	no_errors
UGT1A10	0	genome.wustl.edu	37	2	234545248	234545248	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-C8-A27A-01A-11D-A167-09	TCGA-C8-A27A-10B-01D-A167-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d0fd3dcc-4ac7-4fe9-9fb8-c0676b6faabb	b3bbaa37-c5ad-44d8-aab3-78472e776a66	2	234545248	234545248	A	T	SNP	UGT1A10	NM_019075.2	human	genbank	58_37c	+1	reviewed	missense	c.80	p.K27M	0.999	HMMPfam_UDPGT,superfamily_UDP-Glycosyltransferase/glycogen phosphorylase	HMMPfam_UDPGT,PatternScan_UDPGT,superfamily_UDP-Glycosyltransferase/glycogen phosphorylase	-	no_errors
UIMC1	0	genome.wustl.edu	37	5	176396604	176396604	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-C8-A27A-01A-11D-A167-09	TCGA-C8-A27A-10B-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d0fd3dcc-4ac7-4fe9-9fb8-c0676b6faabb	b3bbaa37-c5ad-44d8-aab3-78472e776a66	5	176396604	176396604	T	C	SNP	UIMC1	NM_016290.3	human	genbank	58_37c	-1	provisional	missense	c.461	p.E154G	1.000	NULL	HMMPfam_UIM,HMMSmart_SM00726	-	no_errors
