Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ABCB5	0	genome.wustl.edu	37	7	20778650	20778650	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	7	20778650	20778650	C	T	SNP	ABCB5	NM_178559.5	human	genbank	58_37c	+1	validated	missense	c.1577	p.T526M	0.993	superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain	HMMPfam_ABC_membrane,HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain,PatternScan_ABC_TRANSPORTER_1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
ACTL7B	0	genome.wustl.edu	37	9	111617531	111617531	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	9	111617531	111617531	C	G	SNP	ACTL7B	NM_006686.3	human	genbank	58_37c	-1	reviewed	missense	c.680	p.G227A	0.991	HMMPfam_Actin,HMMSmart_SM00268,superfamily_Actin-like ATPase domain	HMMPfam_Actin,HMMSmart_SM00268,superfamily_Actin-like ATPase domain	-	no_errors
ADAMTSL1	0	genome.wustl.edu	37	9	18684727	18684727	+	Missense_Mutation	SNP	C	C	T	rs145382523	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	9	18684727	18684727	C	T	SNP	ADAMTSL1	ENST00000276935	human	ensembl	58_37c	+1	known	missense	c.866	p.S289L	0.949	NULL	HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region
AP1AR	0	genome.wustl.edu	37	4	113189561	113189561	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	4	113189561	113189561	G	A	SNP	AP1AR	NM_018569.4	human	genbank	58_37c	+1	validated	missense	c.905	p.R302Q	1.000	NULL	NULL	-	no_errors
ARNTL	0	genome.wustl.edu	37	11	13381930	13381930	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	11	13381930	13381930	A	T	SNP	ARNTL	NM_001030272.1	human	genbank	58_37c	+1	reviewed	missense	c.418	p.T140S	0.999	superfamily_HLH_basic	HMMSmart_PAS,HMMPfam_HLH,HMMSmart_HLH,HMMSmart_PAC,superfamily_HLH_basic,HMMPfam_PAS_3,HMMPfam_PAS,superfamily_SSF55785	-	no_errors
ASB5	0	genome.wustl.edu	37	4	177142658	177142658	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	4	177142658	177142658	C	A	SNP	ASB5	NM_080874.2	human	genbank	58_37c	-1	reviewed	missense	c.478	p.A160S	1.000	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat	HMMPfam_SOCS_box,HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat	-	no_errors
BCL11B	0	genome.wustl.edu	37	14	99697761	99697761	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	14	99697761	99697761	G	A	SNP	BCL11B	NM_138576.2	human	genbank	58_37c	-1	reviewed	silent	c.561	p.S187	0.968	NULL	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
BRE	0	genome.wustl.edu	37	2	28117484	28117484	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	2	28117484	28117484	G	A	SNP	BRE	NM_004899.3	human	genbank	58_37c	+1	validated	missense	c.61	p.V21M	0.998	HMMPfam_BRE	HMMPfam_BRE	-	no_errors
BTLA	0	genome.wustl.edu	37	3	112185099	112185099	+	Silent	SNP	A	A	C	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	3	112185099	112185099	A	C	SNP	BTLA	NM_181780.3	human	genbank	58_37c	-1	validated	silent	c.726	p.V242	0.439	NULL	HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin	-	no_errors
C17orf97	0	genome.wustl.edu	37	17	262973	262973	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	17	262973	262973	G	A	SNP	C17orf97	NM_001013672.4	human	genbank	58_37c	+1	validated	silent	c.339	p.P113	0.000	NULL	NULL	-	no_errors
C1orf141	0	genome.wustl.edu	37	1	67581050	67581050	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	1	67581050	67581050	C	A	SNP	C1orf141	NM_001013674.1	human	genbank	58_37c	-1	predicted	nonsense	c.331	p.E111*	0.825	NULL	NULL	-	no_errors
C21orf125	0	genome.wustl.edu	37	21	44871895	44871895	+	RNA	SNP	G	A	A	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	21	44871895	44871895	G	A	SNP	C21orf125	NR_026960.1	human	genbank	58_37c	+1	predicted	rna	NULL	NULL	0.000	-	-	-	no_errors
C3orf77	0	genome.wustl.edu	37	3	44285298	44285298	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	3	44285298	44285298	C	T	SNP	C3orf77	NM_001145030.1	human	genbank	58_37c	+1	validated	missense	c.1300	p.P434S	0.007	NULL	HMMPfam_PAZ	-	no_errors
C5orf42	0	genome.wustl.edu	37	5	37169272	37169272	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	5	37169272	37169272	T	G	SNP	C5orf42	NM_023073.3	human	genbank	58_37c	-1	predicted	missense	c.3494	p.N1165T	0.095	NULL	NULL	-	no_errors
CAMKV	0	genome.wustl.edu	37	3	49898960	49898960	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	3	49898960	49898960	G	A	SNP	CAMKV	NM_024046.3	human	genbank	58_37c	-1	validated	missense	c.353	p.S118L	1.000	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase	-	no_errors
CAPRIN2	0	genome.wustl.edu	37	12	30888067	30888067	+	Missense_Mutation	SNP	C	C	T	rs139487645	byFrequency	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	12	30888067	30888067	C	T	SNP	CAPRIN2	NM_001002259.1	human	genbank	58_37c	-1	validated	missense	c.644	p.R215Q	0.887	NULL	HMMPfam_C1q,HMMSmart_SM00110,superfamily_TNF-like	-	no_errors
CCDC62	0	genome.wustl.edu	37	12	123262167	123262167	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	12	123262167	123262167	C	T	SNP	CCDC62	NM_201435.3	human	genbank	58_37c	+1	validated	missense	c.166	p.L56F	0.971	NULL	NULL	-	no_errors
CCR7	0	genome.wustl.edu	37	17	38721654	38721654	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	17	38721654	38721654	A	T	SNP	CCR7	NM_001838.2	human	genbank	58_37c	-1	reviewed	missense	c.8	p.L3Q	0.995	NULL	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
CDK16	0	genome.wustl.edu	37	X	47088130	47088130	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	X	47088130	47088130	G	T	SNP	CDK16	NM_033018.3	human	genbank	58_37c	+1	reviewed	missense	c.1472	p.G491V	1.000	superfamily_Protein kinase-like (PK-like)	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
CHML	0	genome.wustl.edu	37	1	241798027	241798027	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	1	241798027	241798027	C	A	SNP	CHML	NM_001821.3	human	genbank	58_37c	-1	reviewed	nonsense	c.1042	p.E348*	1.000	HMMPfam_GDI,superfamily_FAD/NAD(P)-binding domain	HMMPfam_GDI,superfamily_FAD/NAD(P)-binding domain,superfamily_FAD-linked reductases C-terminal domain	-	no_errors
CMYA5	0	genome.wustl.edu	37	5	79030169	79030169	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	5	79030169	79030169	T	G	SNP	CMYA5	NM_153610.3	human	genbank	58_37c	+1	validated	missense	c.5581	p.L1861V	0.456	NULL	HMMPfam_SPRY,HMMPfam_fn3,HMMSmart_FN3,superfamily_FN_III-like	-	no_errors
CNKSR2	0	genome.wustl.edu	37	X	21450849	21450849	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	X	21450849	21450849	C	T	SNP	CNKSR2	NM_014927.3	human	genbank	58_37c	+1	reviewed	silent	c.348	p.T116	0.987	HMMPfam_CRIC_ras_sig	HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like,HMMPfam_SAM_1,HMMSmart_SM00454,HMMPfam_PH,HMMSmart_SM00233,HMMPfam_DUF1170,superfamily_SAM/Pointed domain,HMMPfam_CRIC_ras_sig,superfamily_PH domain-like	-	no_errors
COL12A1	0	genome.wustl.edu	37	6	75866154	75866154	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	6	75866154	75866154	G	A	SNP	COL12A1	NM_004370.5	human	genbank	58_37c	-1	reviewed	silent	c.3069	p.V1023	0.000	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III	HMMPfam_VWA,HMMSmart_SM00327,HMMSmart_SM00210,HMMPfam_fn3,HMMSmart_SM00060,HMMPfam_Collagen,superfamily_Fibronectin type III,superfamily_Concanavalin A-like lectins/glucanases,superfamily_vWA-like	-	no_errors
CPS1	0	genome.wustl.edu	37	2	211503908	211503908	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	2	211503908	211503908	C	A	SNP	CPS1	NM_001122633.1	human	genbank	58_37c	+1	reviewed	missense	c.2882	p.T961K	1.000	HMMPfam_CPSase_L_D3,superfamily_Carbamoyl phosphate synthetase large subunit connection domain	HMMPfam_GATase,HMMPfam_CPSase_sm_chain,superfamily_Carbamoyl phosphate synthetase small subunit N-terminal domain,HMMPfam_CPSase_L_D2,PatternScan_CPSASE_1,PatternScan_CPSASE_2,HMMPfam_CPSase_L_D3,superfamily_Carbamoyl phosphate synthetase large subunit connection domain,HMMPfam_CPSase_L_chain,HMMPfam_MGS,superfamily_PreATP-grasp domain,superfamily_Class I glutamine amidotransferase-like,superfamily_Methylglyoxal synthase-like,superfamily_Glutathione synthetase ATP-binding domain-like	-	no_errors
CTAGE1	0	genome.wustl.edu	37	18	19995860	19995860	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	18	19995860	19995860	G	T	SNP	CTAGE1	NM_172241.2	human	genbank	58_37c	-1	validated	missense	c.1915	p.L639I	0.383	NULL	NULL	-	no_errors
DHX38	0	genome.wustl.edu	37	16	72130772	72130772	+	Silent	SNP	C	C	T	rs139547116	byFrequency	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	16	72130772	72130772	C	T	SNP	DHX38	NM_014003.3	human	genbank	58_37c	+1	reviewed	silent	c.375	p.S125	0.997	NULL	HMMPfam_Helicase_C,HMMSmart_HELICc,PatternScan_DEAH_ATP_HELICASE,HMMPfam_HA2,HMMPfam_DUF1605,HMMSmart_DEXDc,superfamily_SSF52540	-	no_errors
DICER1	0	genome.wustl.edu	37	14	95582133	95582133	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	14	95582133	95582133	G	A	SNP	DICER1	NM_030621.3	human	genbank	58_37c	-1	reviewed	missense	c.1778	p.S593L	0.997	superfamily_SSF52540	HMMPfam_Ribonuclease_3,HMMSmart_RIBOc,PatternScan_RNASE_3_1,superfamily_RNase_III,HMMPfam_dsrm,HMMSmart_DSRM,HMMPfam_Helicase_C,HMMSmart_HELICc,HMMPfam_PAZ,HMMPfam_dsRNA_bind,HMMPfam_DEAD,HMMSmart_DEXDc,superfamily_SSF101690,superfamily_SSF52540,superfamily_SSF54768	-	no_errors
DLL1	0	genome.wustl.edu	37	6	170592574	170592574	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	6	170592574	170592574	C	T	SNP	DLL1	NM_005618.3	human	genbank	58_37c	-1	reviewed	missense	c.1793	p.R598H	1.000	NULL	PatternScan_ASX_HYDROXYL,HMMPfam_DSL,HMMSmart_SM00051,HMMSmart_SM00179,HMMPfam_EGF,HMMSmart_SM00181,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_MNNL,PatternScan_EGF_1,PatternScan_EGF_2,PatternScan_EGF_CA,superfamily_EGF/Laminin	-	no_errors
DOCK2	0	genome.wustl.edu	37	5	169494675	169494675	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	5	169494675	169494675	C	T	SNP	DOCK2	NM_004946.2	human	genbank	58_37c	+1	validated	silent	c.4629	p.F1543	0.595	superfamily_Cytochrome c	HMMSmart_SM00326,superfamily_SH3-domain,superfamily_Cytochrome c,HMMPfam_SH3_2	-	no_errors
DRD2	0	genome.wustl.edu	37	11	113283314	113283314	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	11	113283314	113283314	C	G	SNP	DRD2	NM_000795.3	human	genbank	58_37c	-1	reviewed	missense	c.1102	p.E368Q	1.000	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
EDN3	0	genome.wustl.edu	37	20	57899430	57899430	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	20	57899430	57899430	C	T	SNP	EDN3	NM_000114.2	human	genbank	58_37c	+1	reviewed	silent	c.633	p.H211	0.000	NULL	HMMPfam_Endothelin,HMMSmart_SM00272,PatternScan_ENDOTHELIN	-	no_errors
ENAM	0	genome.wustl.edu	37	4	71500234	71500234	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	4	71500234	71500234	G	T	SNP	ENAM	NM_031889.2	human	genbank	58_37c	+1	reviewed	missense	c.420	p.K140N	0.841	NULL	NULL	-	no_errors
ENSG00000174093	0	genome.wustl.edu	37	17	36357250	36357250	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	17	36357250	36357250	G	C	SNP	ENSG00000174093	ENST00000312412	human	ensembl	58_37c	-1	known	missense	c.1003	p.P335A	1.000	"HMMPfam_Peptidase_M1,superfamily_Metalloproteases (""zincins"") catalytic domain"	"HMMPfam_Peptidase_M1,superfamily_Metalloproteases (""zincins"") catalytic domain,superfamily_Leukotriene A4 hydrolase N-terminal domain"	-	no_errors
ENSG00000198786	0	genome.wustl.edu	37	MT	12344	12344	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	MT	12344	12344	T	C	SNP	ENSG00000198786	ENST00000361567	human	ensembl	58_37c	+1	known	missense	c.8	p.M3T	NULL	NULL	HMMPfam_Oxidored_q1_N,HMMPfam_Oxidored_q1,HMMPfam_NADH5_C	-	mismatch_between_exon_seq_and_reference
ENSG00000198886	0	genome.wustl.edu	37	MT	11493	11493	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	MT	11493	11493	G	A	SNP	ENSG00000198886	ENST00000361381	human	ensembl	58_37c	+1	known	missense	c.734	p.R245H	NULL	HMMPfam_Oxidored_q1	HMMPfam_Oxidored_q5_N,HMMPfam_Oxidored_q1	-	no_stop_codon:bad_bp_length_for_coding_region:mismatch_between_exon_seq_and_reference
ENSG00000210082	0	genome.wustl.edu	37	MT	2492	2492	+	RNA	SNP	G	G	A	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	MT	2492	2492	G	A	SNP	ENSG00000210082	ENST00000387347	human	ensembl	58_37c	+1	known	rna	NULL	NULL	NULL	-	-	-	no_errors
ENSG00000210082	0	genome.wustl.edu	37	MT	3184	3184	+	RNA	SNP	C	C	T	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	MT	3184	3184	C	T	SNP	ENSG00000210082	ENST00000387347	human	ensembl	58_37c	+1	known	rna	NULL	NULL	NULL	-	-	-	no_errors
ENSG00000233225	0	genome.wustl.edu	37	7	39873820	39873820	+	Splice_Site	SNP	G	G	T	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	7	39873820	39873820	G	T	SNP	ENSG00000233225	ENST00000457532	human	ensembl	58_37c	+1	known	splice_site	c.NULL	NULL	0.999	-	-	-	no_coding_region:pseudogene
F13B	0	genome.wustl.edu	37	1	197032127	197032127	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	1	197032127	197032127	A	C	SNP	F13B	NM_001994.2	human	genbank	58_37c	-1	reviewed	missense	c.125	p.F42C	1.000	HMMPfam_Sushi,HMMSmart_CCP,superfamily_Complement_control_module	HMMPfam_Sushi,HMMSmart_CCP,superfamily_Complement_control_module	-	no_errors
FCRL3	0	genome.wustl.edu	37	1	157650537	157650537	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	1	157650537	157650537	T	C	SNP	FCRL3	NM_052939.3	human	genbank	58_37c	-1	reviewed	missense	c.1981	p.I661V	0.010	NULL	PatternScan_N6_MTASE,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_ig,superfamily_Immunoglobulin	-	no_errors
FKBP3	0	genome.wustl.edu	37	14	45599056	45599056	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	14	45599056	45599056	T	G	SNP	FKBP3	NM_002013.3	human	genbank	58_37c	-1	reviewed	missense	c.259	p.N87H	0.999	superfamily_FKBP-like	HMMPfam_FKBP_C,superfamily_FKBP-like	-	no_errors
FMO2	0	genome.wustl.edu	37	1	171162534	171162534	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	1	171162534	171162534	G	T	SNP	FMO2	NM_001460.2	human	genbank	58_37c	+1	reviewed	nonsense	c.193	p.E65*	1.000	HMMPfam_FMO-like,superfamily_SSF51905	HMMPfam_FMO-like,superfamily_SSF51905	-	no_errors
G0S2	0	genome.wustl.edu	37	1	209849295	209849295	+	Missense_Mutation	SNP	C	C	A	rs140536045	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	1	209849295	209849295	C	A	SNP	G0S2	NM_015714.3	human	genbank	58_37c	+1	validated	missense	c.266	p.T89K	0.000	NULL	NULL	-	no_errors
GATA2	0	genome.wustl.edu	37	3	128205206	128205206	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	3	128205206	128205206	G	C	SNP	GATA2	NM_001145661.1	human	genbank	58_37c	-1	reviewed	missense	c.235	p.L79V	1.000	NULL	HMMPfam_GATA,HMMSmart_ZnF_GATA,PatternScan_GATA_ZN_FINGER_1,superfamily_SSF57716	-	no_errors
GNG5P2	0	genome.wustl.edu	37	X	109590108	109590108	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	X	109590108	109590108	C	T	SNP	GNG5P2	ENST00000372054	human	ensembl	58_37c	-1	known	silent	c.30	p.T10	1.000	HMMPfam_G-gamma,HMMSmart_SM00224,superfamily_Transducin (heterotrimeric G protein) gamma chain	HMMPfam_G-gamma,HMMSmart_SM00224,superfamily_Transducin (heterotrimeric G protein) gamma chain	-	no_errors
IBSP	0	genome.wustl.edu	37	4	88723554	88723554	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	4	88723554	88723554	C	T	SNP	IBSP	NM_004967.3	human	genbank	58_37c	+1	reviewed	missense	c.41	p.A14V	1.000	NULL	HMMPfam_BSP_II	-	no_errors
IGLV2-33	0	genome.wustl.edu	37	22	22930906	22930906	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	22	22930906	22930906	G	T	SNP	IGLV2-33	ENST00000390302	human	ensembl	58_37c	+1	known	missense	c.101	p.G34V	0.724	HMMPfam_V-set,superfamily_Immunoglobulin	HMMSmart_SM00406,HMMPfam_V-set,superfamily_Immunoglobulin	-	no_stop_codon:bad_bp_length_for_coding_region
IGLV3-25	0	genome.wustl.edu	37	22	23029718	23029718	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	22	23029718	23029718	A	T	SNP	IGLV3-25	ENST00000390305	human	ensembl	58_37c	+1	known	missense	c.320	p.Q107L	0.008	HMMSmart_SM00406,HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin	HMMSmart_SM00406,HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin	-	no_stop_codon:bad_bp_length_for_coding_region
IKZF1	0	genome.wustl.edu	37	7	50455095	50455095	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	7	50455095	50455095	C	A	SNP	IKZF1	ENST00000331340	human	ensembl	58_37c	+1	known	missense	c.642	p.S214R	1.000	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
INPP4A	0	genome.wustl.edu	37	2	99175925	99175925	+	Splice_Site	SNP	G	G	C	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	2	99175925	99175925	G	C	SNP	INPP4A	NM_001134224.1	human	genbank	58_37c	+1	reviewed	splice_site	c.1838-1	e16-1	1.000	-	-	-	no_errors
KLHL13	0	genome.wustl.edu	37	X	117053569	117053569	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	X	117053569	117053569	T	C	SNP	KLHL13	NM_033495.3	human	genbank	58_37c	-1	reviewed	missense	c.485	p.D162G	1.000	HMMSmart_SM00225,superfamily_POZ domain,HMMPfam_BTB	HMMSmart_SM00225,HMMPfam_Kelch_1,HMMSmart_SM00612,superfamily_Galactose oxidase central domain,superfamily_POZ domain,HMMPfam_BACK,HMMPfam_BTB	-	no_errors
KLK11	0	genome.wustl.edu	37	19	51526351	51526351	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	19	51526351	51526351	G	T	SNP	KLK11	NM_144947.1	human	genbank	58_37c	-1	reviewed	nonsense	c.693	p.C231*	1.000	HMMPfam_Trypsin,HMMSmart_SM00020,superfamily_Trypsin-like serine proteases,PatternScan_TRYPSIN_SER	HMMPfam_Trypsin,HMMSmart_SM00020,superfamily_Trypsin-like serine proteases,PatternScan_TRYPSIN_HIS,PatternScan_TRYPSIN_SER	-	no_errors
KRTAP4-5	0	genome.wustl.edu	37	17	39305800	39305800	+	Missense_Mutation	SNP	T	T	A	rs35633784	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	17	39305800	39305800	T	A	SNP	KRTAP4-5	NM_033188.3	human	genbank	58_37c	-1	reviewed	missense	c.220	p.S74C	0.689	PatternScan_TNFR_NGFR_1,HMMPfam_Keratin_B2	PatternScan_TNFR_NGFR_1,HMMPfam_Keratin_B2	-	no_errors
KRTAP4-6	0	genome.wustl.edu	37	17	39296361	39296361	+	Missense_Mutation	SNP	A	A	G	rs146882220	byCluster	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	17	39296361	39296361	A	G	SNP	KRTAP4-6	ENST00000345847	human	ensembl	58_37c	-1	known	missense	c.379	p.S127P	0.000	HMMPfam_Keratin_B2	HMMPfam_Keratin_B2	-	no_errors
LOX	0	genome.wustl.edu	37	5	121411136	121411136	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	5	121411136	121411136	G	A	SNP	LOX	NM_002317.5	human	genbank	58_37c	-1	reviewed	nonsense	c.841	p.R281*	1.000	HMMPfam_Lysyl_oxidase	HMMPfam_Lysyl_oxidase,PatternScan_LYSYL_OXIDASE	-	no_errors
LRFN5	0	genome.wustl.edu	37	14	42356316	42356316	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	14	42356316	42356316	C	A	SNP	LRFN5	NM_152447.3	human	genbank	58_37c	+1	validated	missense	c.488	p.P163H	1.000	HMMPfam_LRR_1,superfamily_SSF52058	HMMSmart_LRRNT,HMMSmart_LRRCT,HMMPfam_LRR_1,HMMSmart_LRR_TYP,HMMSmart_IGc2,HMMPfam_fn3,superfamily_FN_III-like,HMMPfam_I-set,superfamily_SSF48726,superfamily_SSF52058	-	no_errors
LSM11	0	genome.wustl.edu	37	5	157182067	157182067	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	5	157182067	157182067	C	G	SNP	LSM11	NM_173491.2	human	genbank	58_37c	+1	provisional	missense	c.878	p.S293C	1.000	HMMPfam_LSM,superfamily_Sm_like_riboprot	HMMPfam_LSM,superfamily_Sm_like_riboprot	-	no_errors
LYST	0	genome.wustl.edu	37	1	235955172	235955172	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	1	235955172	235955172	T	G	SNP	LYST	NM_000081.2	human	genbank	58_37c	-1	reviewed	missense	c.4370	p.H1457P	1.000	NULL	HMMPfam_Beach,superfamily_BEACH domain,PatternScan_COPPER_BLUE,HMMSmart_SM00320,superfamily_WD40 repeat-like,PatternScan_WD_REPEATS_1,HMMPfam_WD40,superfamily_PH domain-like	-	no_errors
MADD	0	genome.wustl.edu	37	11	47345258	47345258	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	11	47345258	47345258	G	A	SNP	MADD	NM_003682.3	human	genbank	58_37c	+1	reviewed	missense	c.4414	p.G1472R	1.000	NULL	HMMPfam_DENN,HMMSmart_SM00799,HMMPfam_dDENN,HMMSmart_SM00801,HMMPfam_uDENN,HMMSmart_SM00800	-	no_errors
MARK1	0	genome.wustl.edu	37	1	220824018	220824018	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	1	220824018	220824018	G	A	SNP	MARK1	NM_018650.3	human	genbank	58_37c	+1	validated	silent	c.1527	p.R509	1.000	NULL	HMMPfam_UBA,HMMSmart_SM00219,HMMPfam_KA1,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),HMMSmart_SM00165,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,superfamily_Kinase associated domain 1 KA1	-	no_errors
MATN2	0	genome.wustl.edu	37	8	99028810	99028810	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	8	99028810	99028810	C	T	SNP	MATN2	NM_002380.3	human	genbank	58_37c	+1	reviewed	missense	c.1616	p.S539L	0.001	HMMSmart_SM00179,HMMPfam_EGF,HMMSmart_SM00181,superfamily_EGF/Laminin	PatternScan_ASX_HYDROXYL,HMMSmart_SM00179,HMMPfam_VWA,HMMSmart_SM00327,HMMPfam_EGF,HMMSmart_SM00181,PatternScan_EGF_2,HMMPfam_Matrilin_ccoil,superfamily_vWA-like,superfamily_EGF/Laminin	-	no_errors
MIR140	0	genome.wustl.edu	37	16	69967002	69967002	+	RNA	SNP	C	C	T	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	16	69967002	69967002	C	T	SNP	MIR140	ENST00000385282	human	ensembl	58_37c	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors
MND1	0	genome.wustl.edu	37	4	154315444	154315444	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	4	154315444	154315444	C	G	SNP	MND1	NM_032117.2	human	genbank	58_37c	+1	validated	missense	c.307	p.L103V	0.686	HMMPfam_Mnd1	HMMPfam_Mnd1	-	no_errors
MRGPRX3	0	genome.wustl.edu	37	11	18158830	18158830	+	Silent	SNP	C	C	A	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	11	18158830	18158830	C	A	SNP	MRGPRX3	NM_054031.3	human	genbank	58_37c	+1	reviewed	silent	c.81	p.T27	0.092	superfamily_Family A G protein-coupled receptor-like	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
MYOZ2	0	genome.wustl.edu	37	4	120072076	120072076	+	Silent	SNP	C	C	A	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	4	120072076	120072076	C	A	SNP	MYOZ2	NM_016599.3	human	genbank	58_37c	+1	validated	silent	c.126	p.I42	1.000	HMMPfam_Calsarcin	HMMPfam_Calsarcin	-	no_errors
MYT1	0	genome.wustl.edu	37	20	62871696	62871696	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	20	62871696	62871696	C	T	SNP	MYT1	NM_004535.2	human	genbank	58_37c	+1	reviewed	silent	c.3261	p.F1087	0.941	NULL	HMMPfam_zf-C2HC,HMMPfam_MYT1,superfamily_SSF103637	-	no_errors
N4BP2	0	genome.wustl.edu	37	4	40121887	40121887	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	4	40121887	40121887	C	A	SNP	N4BP2	NM_018177.3	human	genbank	58_37c	+1	reviewed	missense	c.2156	p.S719Y	0.000	NULL	HMMPfam_Smr,HMMSmart_SM00463,superfamily_UBA-like,HMMPfam_DUF1771,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
NAV3	0	genome.wustl.edu	37	12	78443778	78443778	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	12	78443778	78443778	G	T	SNP	NAV3	NM_014903.4	human	genbank	58_37c	+1	validated	missense	c.2029	p.D677Y	1.000	NULL	HMMPfam_CH,HMMSmart_SM00033,HMMSmart_SM00382,superfamily_Calponin-homology domain CH-domain,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
NCOA6	0	genome.wustl.edu	37	20	33364231	33364231	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	20	33364231	33364231	G	A	SNP	NCOA6	NM_014071.2	human	genbank	58_37c	-1	reviewed	nonsense	c.256	p.Q86*	1.000	NULL	NULL	-	no_errors
NDST3	0	genome.wustl.edu	37	4	119161726	119161726	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	4	119161726	119161726	C	T	SNP	NDST3	NM_004784.2	human	genbank	58_37c	+1	reviewed	silent	c.2166	p.Y722	0.448	HMMPfam_Sulfotransfer_1,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_Sulfotransfer_1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
NEDD9	0	genome.wustl.edu	37	6	11191022	11191022	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	6	11191022	11191022	G	C	SNP	NEDD9	NM_001142393.1	human	genbank	58_37c	-1	validated	missense	c.1080	p.D360E	0.978	NULL	HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain,HMMPfam_Serine_rich	-	no_errors
NEK3	0	genome.wustl.edu	37	13	52707287	52707287	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	13	52707287	52707287	G	A	SNP	NEK3	NM_002498.2	human	genbank	58_37c	-1	reviewed	missense	c.1511	p.A504V	0.000	NULL	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	pseudogene:no_stop_codon:bad_bp_length_for_coding_region
NFATC4	0	genome.wustl.edu	37	14	24845639	24845639	+	Nonsense_Mutation	SNP	C	C	A	rs141569636	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	14	24845639	24845639	C	A	SNP	NFATC4	NM_001136022.1	human	genbank	58_37c	+1	reviewed	nonsense	c.2385	p.C795*	0.491	NULL	HMMPfam_TIG,HMMSmart_IPT,superfamily_P53_like_DNA_bnd,HMMPfam_RHD,superfamily_Ig_E-set	-	no_errors
NPC1	0	genome.wustl.edu	37	18	21140315	21140315	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	18	21140315	21140315	G	A	SNP	NPC1	NM_000271.4	human	genbank	58_37c	-1	reviewed	missense	c.761	p.P254L	1.000	NULL	HMMPfam_Patched,superfamily_SSF82866	-	no_errors
NUP43	0	genome.wustl.edu	37	6	150067641	150067641	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	6	150067641	150067641	G	A	SNP	NUP43	ENST00000367402	human	ensembl	58_37c	-1	known	silent	c.174	p.A58	0.000	NULL	NULL	-	no_errors
OR2A12	0	genome.wustl.edu	37	7	143792630	143792630	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	7	143792630	143792630	G	A	SNP	OR2A12	NM_001004135.1	human	genbank	58_37c	+1	provisional	missense	c.430	p.A144T	0.001	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
OR51A2	0	genome.wustl.edu	37	11	4976079	4976079	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	11	4976079	4976079	T	G	SNP	OR51A2	NM_001004748.1	human	genbank	58_37c	-1	provisional	missense	c.865	p.K289Q	1.000	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
PAX7	0	genome.wustl.edu	37	1	19018346	19018346	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	1	19018346	19018346	C	A	SNP	PAX7	NM_002584.2	human	genbank	58_37c	+1	reviewed	missense	c.685	p.L229M	1.000	HMMPfam_Homeobox,HMMSmart_SM00389,superfamily_Homeodomain-like	HMMPfam_Homeobox,HMMSmart_SM00389,HMMPfam_PAX,HMMSmart_SM00351,PatternScan_PAIRED_1,superfamily_Homeodomain-like,PatternScan_HOMEOBOX_1	-	no_errors
PCGF2	0	genome.wustl.edu	37	17	36895484	36895488	+	Frame_Shift_Del	DEL	TGTCT	TGTCT	-	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	TGTCT	TGTCT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	17	36895484	36895488	TGTCT	-	DEL	PCGF2	NM_007144.2	human	genbank	58_37c	-1	reviewed	frame_shift_del	c.232_228	p.Q76fs	1.000:1.000:1.000:1.000:1.000	superfamily_SSF57850	HMMSmart_RING,PatternScan_ZF_RING_1,HMMPfam_zf-C3HC4,superfamily_SSF57850	-	no_errors
PGBD2	0	genome.wustl.edu	37	1	249212333	249212333	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	1	249212333	249212333	G	A	SNP	PGBD2	NM_170725.2	human	genbank	58_37c	+1	validated	missense	c.1550	p.R517Q	0.988	NULL	NULL	-	no_errors
PHKA2	0	genome.wustl.edu	37	X	19001998	19001998	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	X	19001998	19001998	A	C	SNP	PHKA2	NM_000292.2	human	genbank	58_37c	-1	reviewed	missense	c.53	p.V18G	1.000	HMMPfam_PHK_AB,superfamily_Six-hairpin glycosidases	HMMPfam_PHK_AB,superfamily_Six-hairpin glycosidases	-	no_errors
PIAS2	0	genome.wustl.edu	37	18	44416348	44416349	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	18	44416348	44416349	-	T	INS	PIAS2	NM_004671.2	human	genbank	58_37c	-1	validated	frame_shift_ins	c.1174_1173	p.A391fs	1.000:0.998	HMMPfam_zf-MIZ,superfamily_RING/U-box	HMMPfam_SAP,HMMSmart_SM00513,HMMPfam_zf-MIZ,superfamily_RING/U-box	-	no_errors
PIK3CA	0	genome.wustl.edu	37	3	178928086	178928087	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	3	178928086	178928087	-	G	INS	PIK3CA	NM_006218.2	human	genbank	58_37c	+1	reviewed	frame_shift_ins	c.1364_1365	p.L456fs	1.000:1.000	HMMPfam_PI3K_C2,superfamily_C2_CaLB	HMMSmart_C2,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,HMMPfam_PI3Ka,HMMSmart_PI3Ka,HMMPfam_PI3K_C2,HMMSmart_PI3K_C2,HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_C2_CaLB,superfamily_Kinase_like,superfamily_ARM-type_fold,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2,superfamily_SSF54236	-	no_errors
PIP5K1B	0	genome.wustl.edu	37	9	71532631	71532631	+	Silent	SNP	T	T	C	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	9	71532631	71532631	T	C	SNP	PIP5K1B	NM_003558.2	human	genbank	58_37c	+1	validated	silent	c.939	p.G313	0.518	HMMPfam_PIP5K,HMMSmart_SM00330,superfamily_SAICAR synthase-like	HMMPfam_PIP5K,HMMSmart_SM00330,superfamily_SAICAR synthase-like	-	no_errors
PLEKHA6	0	genome.wustl.edu	37	1	204192633	204192633	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	1	204192633	204192633	G	A	SNP	PLEKHA6	NM_014935.2	human	genbank	58_37c	-1	validated	missense	c.3112	p.R1038W	1.000	NULL	HMMPfam_PH,HMMSmart_PH,superfamily_SSF50729	-	no_errors
PLEKHH1	0	genome.wustl.edu	37	14	68042162	68042162	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	14	68042162	68042162	C	G	SNP	PLEKHH1	NM_020715.2	human	genbank	58_37c	+1	validated	missense	c.2142	p.F714L	1.000	HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like	HMMPfam_MyTH4,HMMSmart_SM00139,HMMPfam_PH,HMMSmart_SM00233,HMMPfam_FERM_M,superfamily_Second domain of FERM,HMMSmart_SM00295,superfamily_PH domain-like	-	no_errors
PLEKHH2	0	genome.wustl.edu	37	2	43937469	43937469	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	2	43937469	43937469	G	A	SNP	PLEKHH2	NM_172069.3	human	genbank	58_37c	+1	validated	silent	c.2214	p.P738	0.842	HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like	HMMPfam_MyTH4,HMMSmart_SM00139,HMMPfam_PH,HMMSmart_SM00233,HMMPfam_FERM_M,superfamily_Second domain of FERM,HMMSmart_SM00295,superfamily_PH domain-like	-	no_errors
POLE	0	genome.wustl.edu	37	12	133250250	133250250	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	12	133250250	133250250	G	C	SNP	POLE	NM_006231.2	human	genbank	58_37c	-1	validated	missense	c.1270	p.L424V	1.000	HMMPfam_DNA_pol_B_exo,HMMSmart_POLBc,superfamily_RNaseH_fold	HMMPfam_DNA_pol_B_exo,HMMPfam_DNA_pol_B,HMMSmart_POLBc,superfamily_RNaseH_fold,HMMPfam_DUF1744,superfamily_SSF56672	-	no_errors
POLR1A	0	genome.wustl.edu	37	2	86276027	86276027	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	2	86276027	86276027	A	C	SNP	POLR1A	NM_015425.3	human	genbank	58_37c	-1	validated	missense	c.2614	p.Y872D	1.000	HMMPfam_RNA_pol_Rpb1_4,superfamily_beta and beta-prime subunits of DNA dependent RNA-polymerase	HMMPfam_RNA_pol_Rpb1_2,HMMSmart_SM00663,HMMPfam_RNA_pol_Rpb1_3,HMMPfam_RNA_pol_Rpb1_1,HMMPfam_RNA_pol_Rpb1_5,HMMPfam_RNA_pol_Rpb1_4,superfamily_beta and beta-prime subunits of DNA dependent RNA-polymerase	-	no_errors
POM121L2	0	genome.wustl.edu	37	6	27278901	27278901	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	6	27278901	27278901	G	A	SNP	POM121L2	ENST00000444565	human	ensembl	58_37c	-1	known	missense	c.1049	p.T350I	0.002	NULL	NULL	-	no_errors
PRAMEF11	0	genome.wustl.edu	37	1	12885009	12885009	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	1	12885009	12885009	A	C	SNP	PRAMEF11	ENST00000331684	human	ensembl	58_37c	-1	known	missense	c.1102	p.L368V	0.000	superfamily_SSF52047	superfamily_SSF52047	-	no_errors
PRAMEF12	0	genome.wustl.edu	37	1	12835814	12835814	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	1	12835814	12835814	C	T	SNP	PRAMEF12	NM_001080830.1	human	genbank	58_37c	+1	provisional	missense	c.416	p.P139L	0.000	superfamily_SSF52047	superfamily_SSF52047	-	no_errors
PRPF40A	0	genome.wustl.edu	37	2	153525674	153525674	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	2	153525674	153525674	G	A	SNP	PRPF40A	NM_017892.3	human	genbank	58_37c	-1	validated	nonsense	c.1741	p.R581*	1.000	HMMSmart_SM00441	HMMPfam_WW,HMMSmart_SM00456,PatternScan_WW_DOMAIN_1,superfamily_WW domain,HMMPfam_FF,HMMSmart_SM00441,superfamily_FF domain	-	no_errors
RARA	0	genome.wustl.edu	37	17	38508726	38508726	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	17	38508726	38508726	C	T	SNP	RARA	NM_000964.2	human	genbank	58_37c	+1	validated	silent	c.774	p.I258	1.000	HMMPfam_Hormone_recep,HMMSmart_SM00430,superfamily_Nuclear receptor ligand-binding domain	HMMPfam_Hormone_recep,HMMSmart_SM00430,HMMPfam_zf-C4,HMMSmart_SM00399,PatternScan_NUCLEAR_REC_DBD_1,superfamily_Nuclear receptor ligand-binding domain,superfamily_Glucocorticoid receptor-like (DNA-binding domain)	-	no_errors
RGS7	0	genome.wustl.edu	37	1	240969623	240969623	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	1	240969623	240969623	G	T	SNP	RGS7	NM_002924.4	human	genbank	58_37c	-1	validated	missense	c.1086	p.F362L	1.000	HMMPfam_RGS,HMMSmart_RGS,superfamily_Regulat_G_prot_signal_superfam	HMMPfam_RGS,HMMSmart_RGS,HMMPfam_DEP,HMMSmart_DEP,HMMPfam_G-gamma,HMMSmart_GGL,superfamily_G-protein_gamma-like,superfamily_Regulat_G_prot_signal_superfam,superfamily_SSF46785	-	no_errors
RIMBP3B	0	genome.wustl.edu	37	22	21742598	21742598	+	Missense_Mutation	SNP	G	G	A	rs468931	byCluster	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	22	21742598	21742598	G	A	SNP	RIMBP3B	NM_001128635.1	human	genbank	58_37c	+1	validated	missense	c.4451	p.R1484K	0.994	HMMSmart_SM00326,superfamily_SH3-domain,HMMPfam_SH3_2	HMMSmart_SM00326,superfamily_SH3-domain,HMMSmart_SM00060,superfamily_Fibronectin type III,HMMPfam_SH3_2,PatternScan_ALDEHYDE_DEHYDR_CYS	-	no_errors
ROS1	0	genome.wustl.edu	37	6	117658501	117658501	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	6	117658501	117658501	C	T	SNP	ROS1	NM_002944.2	human	genbank	58_37c	-1	reviewed	nonsense	c.5082	p.W1694*	0.999	HMMPfam_fn3,HMMSmart_FN3,superfamily_FN_III-like	HMMSmart_LY,HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,PatternScan_RECEPTOR_TYR_KIN_II,HMMPfam_fn3,HMMSmart_FN3,PatternScan_PROTEIN_KINASE_TYR,superfamily_FN_III-like,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,superfamily_SSF63825	-	no_errors
SBNO1	0	genome.wustl.edu	37	12	123815832	123815832	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	12	123815832	123815832	T	G	SNP	SBNO1	NM_018183.3	human	genbank	58_37c	-1	validated	missense	c.997	p.I333L	1.000	NULL	NULL	-	no_errors
SCN3A	0	genome.wustl.edu	37	2	165969454	165969454	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	2	165969454	165969454	A	G	SNP	SCN3A	NM_006922.3	human	genbank	58_37c	-1	reviewed	missense	c.3784	p.Y1262H	1.000	HMMPfam_Ion_trans,superfamily_SSF81324	HMMPfam_IQ,HMMSmart_IQ,HMMPfam_Ion_trans,HMMPfam_Na_trans_assoc,superfamily_SSF81324	-	no_errors
SDR16C5	0	genome.wustl.edu	37	8	57228667	57228667	+	Silent	SNP	T	T	G	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	8	57228667	57228667	T	G	SNP	SDR16C5	NM_138969.2	human	genbank	58_37c	-1	validated	silent	c.240	p.T80	0.000	HMMPfam_adh_short,superfamily_NAD(P)-binding Rossmann-fold domains	HMMPfam_adh_short,superfamily_NAD(P)-binding Rossmann-fold domains	-	no_errors
SH3PXD2B	0	genome.wustl.edu	37	5	171766090	171766090	+	Silent	SNP	G	G	C	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	5	171766090	171766090	G	C	SNP	SH3PXD2B	NM_001017995.2	human	genbank	58_37c	-1	validated	silent	c.2019	p.A673	0.994	NULL	HMMPfam_SH3_1,HMMSmart_SH3,superfamily_SH3,HMMPfam_PX,HMMSmart_PX,superfamily_PX	-	no_errors
SHROOM4	0	genome.wustl.edu	37	X	50350572	50350572	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	X	50350572	50350572	G	A	SNP	SHROOM4	NM_020717.3	human	genbank	58_37c	-1	reviewed	silent	c.3570	p.H1190	0.002	NULL	HMMSmart_SM00228,superfamily_PDZ domain-like,HMMPfam_ASD2,HMMPfam_ASD1	-	no_errors
SIPA1L1	0	genome.wustl.edu	37	14	72085583	72085583	+	Silent	SNP	A	A	C	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	14	72085583	72085583	A	C	SNP	SIPA1L1	NM_015556.1	human	genbank	58_37c	+1	provisional	silent	c.1608	p.R536	0.907	superfamily_Rap/Ran-GAP (Pfam 02145)	HMMPfam_Rap_GAP,HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like,superfamily_Rap/Ran-GAP (Pfam 02145)	-	no_errors
SLC27A5	0	genome.wustl.edu	37	19	59009984	59009984	+	Silent	SNP	G	G	T	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	19	59009984	59009984	G	T	SNP	SLC27A5	NM_012254.2	human	genbank	58_37c	-1	reviewed	silent	c.1971	p.I657	0.004	NULL	HMMPfam_AMP-binding,PatternScan_AMP_BINDING,superfamily_Acetyl-CoA synthetase-like	-	no_errors
SLITRK2	0	genome.wustl.edu	37	X	144905707	144905707	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	X	144905707	144905707	C	T	SNP	SLITRK2	NM_001144003.2	human	genbank	58_37c	+1	reviewed	silent	c.1764	p.T588	0.050	superfamily_L domain-like	HMMPfam_LRRNT,HMMSmart_SM00013,HMMSmart_SM00082,HMMPfam_LRR_1,HMMSmart_SM00369,superfamily_L domain-like	-	no_errors
SPZ1	0	genome.wustl.edu	37	5	79616317	79616317	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	5	79616317	79616317	G	T	SNP	SPZ1	NM_032567.3	human	genbank	58_37c	+1	validated	nonsense	c.283	p.E95*	0.028	NULL	NULL	-	no_errors
SUZ12	0	genome.wustl.edu	37	17	30321730	30321730	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	17	30321730	30321730	C	G	SNP	SUZ12	NM_015355.2	human	genbank	58_37c	+1	reviewed	missense	c.1585	p.L529V	1.000	NULL	PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,HMMPfam_VEFS-Box	-	no_errors
SYTL1	0	genome.wustl.edu	37	1	27680340	27680340	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	1	27680340	27680340	G	A	SNP	SYTL1	NM_032872.1	human	genbank	58_37c	+1	provisional	silent	c.1650	p.T550	0.094	NULL	HMMPfam_C2,HMMSmart_C2,superfamily_C2_CaLB,PatternScan_ATPASE_ALPHA_BETA	-	no_errors
TEX15	0	genome.wustl.edu	37	8	30705357	30705357	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	8	30705357	30705357	C	A	SNP	TEX15	NM_031271.3	human	genbank	58_37c	-1	validated	nonsense	c.1177	p.E393*	0.177	NULL	NULL	-	no_errors
TFAP2D	0	genome.wustl.edu	37	6	50740543	50740543	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	6	50740543	50740543	C	T	SNP	TFAP2D	NM_172238.3	human	genbank	58_37c	+1	validated	missense	c.1325	p.A442V	0.997	NULL	HMMPfam_TF_AP-2	-	no_errors
TMEM131	0	genome.wustl.edu	37	2	98412831	98412831	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	2	98412831	98412831	C	A	SNP	TMEM131	NM_015348.1	human	genbank	58_37c	-1	validated	missense	c.3050	p.R1017I	1.000	NULL	NULL	-	no_errors
TMEM132D	0	genome.wustl.edu	37	12	130184703	130184703	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	12	130184703	130184703	G	A	SNP	TMEM132D	NM_133448.2	human	genbank	58_37c	-1	validated	missense	c.620	p.T207M	0.072	NULL	NULL	-	no_errors
TP53	0	genome.wustl.edu	37	17	7577073	7577073	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	17	7577073	7577073	G	A	SNP	TP53	NM_000546.4	human	genbank	58_37c	-1	reviewed	missense	c.865	p.L289F	0.983	HMMPfam_P53	PatternScan_P53,superfamily_p53-like transcription factors,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain,HMMPfam_P53,HMMPfam_P53_TAD	-	no_errors
TRIO	0	genome.wustl.edu	37	5	14363873	14363873	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	5	14363873	14363873	G	A	SNP	TRIO	NM_007118.2	human	genbank	58_37c	+1	validated	silent	c.2424	p.E808	1.000	NULL	HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_DBL homology domain (DH-domain),HMMSmart_SM00219,HMMSmart_SM00516,superfamily_CRAL/TRIO domain,HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain,HMMPfam_PH,HMMSmart_SM00233,HMMPfam_Spectrin,HMMSmart_SM00220,HMMSmart_SM00408,HMMSmart_SM00409,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),HMMPfam_I-set,HMMPfam_Pkinase,HMMSmart_SM00150,superfamily_Spectrin repeat,superfamily_Immunoglobulin,superfamily_PH domain-like	-	no_errors
TRPA1	0	genome.wustl.edu	37	8	72967727	72967727	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	8	72967727	72967727	C	A	SNP	TRPA1	NM_007332.2	human	genbank	58_37c	-1	reviewed	missense	c.1473	p.K491N	0.917	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat,HMMPfam_Ion_trans,PatternScan_EF_HAND_1	-	no_errors
TSHZ1	0	genome.wustl.edu	37	18	73000318	73000318	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	18	73000318	73000318	A	G	SNP	TSHZ1	NM_005786.4	human	genbank	58_37c	+1	reviewed	missense	c.2821	p.I941V	1.000	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	HMMPfam_Homeobox,HMMSmart_SM00389,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
TTN	0	genome.wustl.edu	37	2	179574368	179574368	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	2	179574368	179574368	C	T	SNP	TTN	ENST00000356127	human	ensembl	58_37c	-1	known	missense	c.24946	p.D8316N	1.000	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_IG_MHC,HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,HMMPfam_PPAK,PatternScan_PROTEIN_KINASE_TYR,HMMPfam_I-set,HMMPfam_ig,HMMPfam_Titin_Z,HMMPfam_Pkinase,PatternScan_FGGY_KINASES_1,PatternScan_PEROXIDASE_1	-	no_errors
TXNL1	0	genome.wustl.edu	37	18	54281805	54281805	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	18	54281805	54281805	T	G	SNP	TXNL1	NM_004786.2	human	genbank	58_37c	-1	validated	missense	c.585	p.K195N	1.000	HMMPfam_DUF1000	HMMPfam_DUF1000,superfamily_Thiordxn-like_fd,HMMPfam_Thioredoxin,PatternScan_THIOREDOXIN_1	-	no_errors
UBE2T	0	genome.wustl.edu	37	1	202304779	202304779	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	1	202304779	202304779	C	T	SNP	UBE2T	NM_014176.3	human	genbank	58_37c	-1	validated	missense	c.104	p.R35Q	1.000	HMMPfam_UQ_con,HMMSmart_SM00212,superfamily_UBC-like	HMMPfam_UQ_con,HMMSmart_SM00212,PatternScan_UBIQUITIN_CONJUGAT_1,superfamily_UBC-like	-	no_errors
WDR1	0	genome.wustl.edu	37	4	10079036	10079036	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	4	10079036	10079036	C	G	SNP	WDR1	NM_017491.3	human	genbank	58_37c	-1	reviewed	missense	c.1606	p.V536L	1.000	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40	HMMSmart_SM00320,superfamily_WD40 repeat-like,PatternScan_WD_REPEATS_1,HMMPfam_WD40	-	no_errors
WDR66	0	genome.wustl.edu	37	12	122441598	122441598	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	12	122441598	122441598	C	T	SNP	WDR66	NM_144668.4	human	genbank	58_37c	+1	validated	silent	c.3378	p.I1126	1.000	NULL	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40,superfamily_EF-hand	-	no_errors
WDR69	0	genome.wustl.edu	37	2	228786260	228786260	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	2	228786260	228786260	G	A	SNP	WDR69	NM_178821.1	human	genbank	58_37c	+1	provisional	missense	c.1196	p.G399D	1.000	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40	HMMSmart_SM00320,superfamily_WD40 repeat-like,PatternScan_WD_REPEATS_1,HMMPfam_WD40	-	no_errors
ZC3H14	0	genome.wustl.edu	37	14	89038412	89038412	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	14	89038412	89038412	G	C	SNP	ZC3H14	NM_024824.4	human	genbank	58_37c	+1	validated	missense	c.274	p.D92H	1.000	NULL	HMMPfam_zf-CCCH,HMMSmart_SM00356	-	no_errors
ZNF534	0	genome.wustl.edu	37	19	52941953	52941953	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	19	52941953	52941953	G	T	SNP	ZNF534	NM_001143939.1	human	genbank	58_37c	+1	validated	nonsense	c.1279	p.E427*	0.052	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
ZNF546	0	genome.wustl.edu	37	19	40519819	40519819	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	19	40519819	40519819	G	T	SNP	ZNF546	NM_178544.3	human	genbank	58_37c	+1	validated	missense	c.642	p.E214D	1.000	superfamily_SSF57667	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
ZNF99	0	genome.wustl.edu	37	19	22941531	22941531	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	19	22941531	22941531	G	A	SNP	ZNF99	NM_001080409.1	human	genbank	58_37c	-1	provisional	nonsense	c.907	p.Q303*	0.860	superfamily_SSF57667	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
ZSCAN12	0	genome.wustl.edu	37	6	28365909	28365909	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1JG-01B-11D-A13L-09	TCGA-D8-A1JG-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	0b15c6f7-8e3e-48ad-a4a2-97d2ada56c44	56cc7ef4-ecf0-41d0-a692-88b352939918	6	28365909	28365909	C	T	SNP	ZSCAN12	ENST00000361028	human	ensembl	58_37c	-1	known	missense	c.274	p.E92K	1.000	HMMPfam_SCAN,HMMSmart_SCAN	HMMPfam_SCAN,HMMSmart_SCAN,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
