Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ABCA3	21	genome.wustl.edu	37	16	2335631	2335631	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	16	2335631	2335631	C	T	SNP	ABCA3	NM_001089.2	human	genbank	58_37c	-1	reviewed	missense	c.3295	p.D1099N	0.980	NULL	HMMPfam_ABC_tran,HMMSmart_SM00382,PatternScan_ABC_TRANSPORTER_1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
ABCA3	21	genome.wustl.edu	37	16	2336930	2336930	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	16	2336930	2336930	C	G	SNP	ABCA3	NM_001089.2	human	genbank	58_37c	-1	reviewed	missense	c.3043	p.E1015Q	1.000	NULL	HMMPfam_ABC_tran,HMMSmart_SM00382,PatternScan_ABC_TRANSPORTER_1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
ACVR1	90	genome.wustl.edu	37	2	158636987	158636987	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	2	158636987	158636987	C	T	SNP	ACVR1	NM_001105.4	human	genbank	58_37c	-1	reviewed	missense	c.193	p.V65I	0.995	HMMPfam_Activin_recp,superfamily_SSF57302	HMMPfam_Activin_recp,HMMPfam_TGF_beta_GS,HMMSmart_GS,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,superfamily_SSF57302	-	no_errors
ARFGEF1	10565	genome.wustl.edu	37	8	68208734	68208734	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	8	68208734	68208734	G	A	SNP	ARFGEF1	NM_006421.3	human	genbank	58_37c	-1	reviewed	nonsense	c.571	p.Q191*	1.000	superfamily_ARM-type_fold	HMMPfam_Sec7,HMMSmart_Sec7,superfamily_Sec7,HMMPfam_DUF1981,superfamily_ARM-type_fold	-	no_errors
ARSK	153642	genome.wustl.edu	37	5	94939216	94939216	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	5	94939216	94939216	C	G	SNP	ARSK	NM_198150.2	human	genbank	58_37c	+1	validated	missense	c.1597	p.P533A	0.000	NULL	HMMPfam_Sulfatase,PatternScan_SULFATASE_2,PatternScan_SULFATASE_1,superfamily_Alkaline_phosphatase_core	-	no_errors
ASTL	431705	genome.wustl.edu	37	2	96795705	96795705	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	2	96795705	96795705	G	C	SNP	ASTL	NM_001002036.3	human	genbank	58_37c	-1	validated	missense	c.732	p.S244R	0.976	"HMMPfam_Astacin,superfamily_Metalloproteases (""zincins"") catalytic domain"	"HMMPfam_Astacin,HMMSmart_SM00235,superfamily_Metalloproteases (""zincins"") catalytic domain"	-	no_errors
ASXL1	171023	genome.wustl.edu	37	20	31022690	31022690	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	20	31022690	31022690	A	G	SNP	ASXL1	NM_015338.5	human	genbank	58_37c	+1	reviewed	silent	c.2175	p.R725	0.004	NULL	NULL	-	no_errors
ATP4A	495	genome.wustl.edu	37	19	36046578	36046578	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	19	36046578	36046578	T	G	SNP	ATP4A	NM_000704.2	human	genbank	58_37c	-1	reviewed	missense	c.2006	p.K669T	1.000	HMMPfam_Hydrolase,superfamily_SSF56784,superfamily_SSF81665	HMMPfam_Cation_ATPase_N,HMMPfam_Hydrolase,HMMPfam_Cation_ATPase_C,HMMPfam_E1-E2_ATPase,HMMPfam_H-K_ATPase_N,PatternScan_ATPASE_E1_E2,superfamily_SSF56784,superfamily_SSF81653,superfamily_SSF81660,superfamily_SSF81665	-	no_errors
ATXN2	6311	genome.wustl.edu	37	12	111926531	111926531	+	Silent	SNP	T	T	C	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	12	111926531	111926531	T	C	SNP	ATXN2	NM_002973.3	human	genbank	58_37c	-1	reviewed	silent	c.2469	p.R823	1.000	NULL	HMMPfam_LsmAD,HMMPfam_PAM2,superfamily_Sm-like ribonucleoproteins	-	no_errors
AUP1	550	genome.wustl.edu	37	2	74754449	74754449	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	2	74754449	74754449	C	G	SNP	AUP1	NM_181575.3	human	genbank	58_37c	-1	reviewed	missense	c.1003	p.E335Q	1.000	HMMPfam_CUE,HMMSmart_CUE	HMMSmart_PlsC,HMMPfam_CUE,HMMSmart_CUE	-	no_errors
BIRC6	57448	genome.wustl.edu	37	2	32738164	32738164	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	2	32738164	32738164	G	A	SNP	BIRC6	NM_016252.3	human	genbank	58_37c	+1	reviewed	missense	c.10511	p.S3504N	1.000	NULL	HMMPfam_UQ_con,HMMSmart_SM00212,HMMPfam_BIR,HMMSmart_SM00238,superfamily_Galactose-binding domain-like,superfamily_UBC-like,superfamily_Inhibitor of apoptosis (IAP) repeat	-	no_errors
C10orf12	26148	genome.wustl.edu	37	10	98743239	98743239	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	10	98743239	98743239	G	A	SNP	C10orf12	NM_015652.2	human	genbank	58_37c	+1	predicted	missense	c.2092	p.A698T	0.000	NULL	NULL	-	no_errors
C12orf51	283450	genome.wustl.edu	37	12	112607429	112607429	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	12	112607429	112607429	C	G	SNP	C12orf51	NM_001109662.2	human	genbank	58_37c	-1	validated	missense	c.10820	p.C3607S	1.000	superfamily_Hect E3 ligase catalytic domain	HMMPfam_HECT,HMMSmart_SM00119,superfamily_Hect E3 ligase catalytic domain	-	no_errors
C16orf62	57020	genome.wustl.edu	37	16	19711758	19711758	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	16	19711758	19711758	C	G	SNP	C16orf62	NM_020314.4	human	genbank	58_37c	+1	predicted	missense	c.2852	p.T951R	0.213	NULL	NULL	-	no_errors
CA9	768	genome.wustl.edu	37	9	35675543	35675543	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	9	35675543	35675543	C	G	SNP	CA9	NM_001216.2	human	genbank	58_37c	+1	reviewed	missense	c.412	p.Q138E	0.996	NULL	HMMPfam_Carb_anhydrase,superfamily_Euk_COanhd,PatternScan_ALPHA_CA_1	-	no_errors
CAMTA2	23125	genome.wustl.edu	37	17	4872988	4872988	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	17	4872988	4872988	C	T	SNP	CAMTA2	NM_015099.3	human	genbank	58_37c	-1	validated	silent	c.3198	p.R1066	0.974	superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_IQ,HMMPfam_Ank,superfamily_Ankyrin repeat,HMMPfam_TIG,HMMPfam_CG-1,superfamily_E set domains,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
CASQ2	845	genome.wustl.edu	37	1	116280890	116280890	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	1	116280890	116280890	C	G	SNP	CASQ2	NM_001232.3	human	genbank	58_37c	-1	reviewed	missense	c.487	p.D163H	1.000	HMMPfam_Calsequestrin,superfamily_Thioredoxin-like	HMMPfam_Calsequestrin,superfamily_Thioredoxin-like,PatternScan_CALSEQUESTRIN_1,PatternScan_CALSEQUESTRIN_2	-	no_errors
CATSPERG	57828	genome.wustl.edu	37	19	38851193	38851193	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	19	38851193	38851193	T	G	SNP	CATSPERG	NM_021185.4	human	genbank	58_37c	+1	validated	missense	c.1673	p.V558G	0.000	NULL	NULL	-	no_errors
CCDC141	285025	genome.wustl.edu	37	2	179702066	179702066	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	2	179702066	179702066	A	C	SNP	CCDC141	NM_173648.2	human	genbank	58_37c	-1	provisional	missense	c.2155	p.F719V	0.001	NULL	NULL	-	no_errors
CECR2	27443	genome.wustl.edu	37	22	18022097	18022097	+	Silent	SNP	T	T	C	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	22	18022097	18022097	T	C	SNP	CECR2	ENST00000400573	human	ensembl	58_37c	+1	known	silent	c.2199	p.P733	0.951	NULL	HMMPfam_Bromodomain,HMMSmart_BROMO,superfamily_Bromodomain,PatternScan_BROMODOMAIN_1	-	no_errors
CHD7	55636	genome.wustl.edu	37	8	61729034	61729039	+	In_Frame_Del	DEL	CAGGGC	CAGGGC	-	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	CAGGGC	CAGGGC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	8	61729034	61729039	CAGGGC	-	DEL	CHD7	NM_017780.2	human	genbank	58_37c	+1	reviewed	in_frame_del	c.2587_2592	p.GQ864in_frame_del	1.000:1.000:1.000:1.000:1.000:1.000	HMMSmart_SM00298	HMMPfam_SNF2_N,HMMPfam_Chromo,HMMSmart_SM00298,HMMPfam_Helicase_C,HMMSmart_SM00490,HMMPfam_BRK,HMMSmart_SM00592,HMMSmart_SM00487,superfamily_Chromo domain-like,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
CNKSR3	154043	genome.wustl.edu	37	6	154754627	154754627	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	6	154754627	154754627	C	T	SNP	CNKSR3	NM_173515.2	human	genbank	58_37c	-1	validated	silent	c.522	p.A174	0.683	HMMPfam_CRIC_ras_sig	HMMPfam_PDZ,HMMSmart_PDZ,superfamily_PDZ,HMMPfam_SAM_1,HMMSmart_SAM,HMMPfam_DUF1170,superfamily_SAM_homology,HMMPfam_CRIC_ras_sig	-	no_errors
COL19A1	1310	genome.wustl.edu	37	6	70866053	70866053	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	6	70866053	70866053	G	T	SNP	COL19A1	NM_001858.4	human	genbank	58_37c	+1	reviewed	missense	c.2114	p.G705V	1.000	NULL	HMMSmart_TSPN,HMMPfam_Collagen,superfamily_ConA_like_lec_gl	-	no_errors
CSPG5	10675	genome.wustl.edu	37	3	47618393	47618393	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	3	47618393	47618393	C	T	SNP	CSPG5	NM_006574.3	human	genbank	58_37c	-1	validated	missense	c.1123	p.D375N	1.000	HMMSmart_EGF	HMMSmart_EGF,HMMPfam_Neural_ProG_Cyt,HMMPfam_Chon_Sulph_att	-	no_errors
DLC1	10395	genome.wustl.edu	37	8	12956886	12956886	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	8	12956886	12956886	C	G	SNP	DLC1	NM_182643.2	human	genbank	58_37c	-1	reviewed	missense	c.2960	p.G987A	1.000	NULL	HMMPfam_RhoGAP,HMMSmart_SM00324,HMMPfam_START,HMMSmart_SM00234,superfamily_GTPase activation domain GAP,HMMPfam_SAM_2,superfamily_Bet v1-like	-	no_errors
ENSG00000118976	0	genome.wustl.edu	37	12	3948638	3948638	+	Silent	SNP	T	T	A	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	12	3948638	3948638	T	A	SNP	ENSG00000118976	ENST00000237841	human	ensembl	58_37c	+1	known	silent	c.171	p.S57	0.914	HMMPfam_OTU,superfamily_SSF54001	HMMPfam_OTU,superfamily_SSF54001	-	no_errors
ENSG00000247252	0	genome.wustl.edu	37	2	101627312	101627312	+	RNA	SNP	C	C	G	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	2	101627312	101627312	C	G	SNP	RPL31	NM_001098577.2	human	genbank	58_37c	+1	reviewed	intronic	c.346+4779	e3+4779	0.001	-	-	-	no_errors
FAM166B	730112	genome.wustl.edu	37	9	35562393	35562394	+	Frame_Shift_Ins	INS	-	-	TAGT	rs72402422	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	9	35562393	35562394	-	TAGT	INS	FAM166B	ENST00000399742	human	ensembl	58_37c	-1	known	frame_shift_ins	c.723_722	p.Y241fs	0.944:0.998	HMMPfam_DUF2475	HMMPfam_DUF2475	-	no_errors
FAM49B	51571	genome.wustl.edu	37	8	130867866	130867866	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	8	130867866	130867866	A	C	SNP	FAM49B	NM_016623.3	human	genbank	58_37c	-1	predicted	missense	c.429	p.D143E	1.000	HMMPfam_DUF1394	HMMPfam_DUF1394	-	no_errors
FAT1	2195	genome.wustl.edu	37	4	187627851	187627851	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	4	187627851	187627851	T	C	SNP	FAT1	NM_005245.3	human	genbank	58_37c	-1	reviewed	missense	c.3131	p.K1044R	0.954	HMMPfam_Cadherin,superfamily_Concanavalin A-like lectins/glucanases,superfamily_Cadherin-like	PatternScan_ASX_HYDROXYL,HMMSmart_SM00282,HMMSmart_SM00179,HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_EGF,HMMSmart_SM00181,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_2,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_Cadherin-like,PatternScan_EGF_CA,superfamily_EGF/Laminin	-	no_errors
FBXW7	55294	genome.wustl.edu	37	4	153247366	153247366	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	4	153247366	153247366	C	T	SNP	FBXW7	NM_033632.2	human	genbank	58_37c	-1	reviewed	missense	c.1436	p.R479Q	1.000	HMMSmart_SM00320,superfamily_WD40 repeat-like,PatternScan_WD_REPEATS_1,HMMPfam_WD40	HMMSmart_SM00320,HMMPfam_F-box,HMMSmart_SM00256,superfamily_WD40 repeat-like,PatternScan_WD_REPEATS_1,HMMPfam_WD40,superfamily_F-box domain	-	no_errors
FBXW8	26259	genome.wustl.edu	37	12	117465850	117465850	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	12	117465850	117465850	G	A	SNP	FBXW8	NM_153348.2	human	genbank	58_37c	+1	reviewed	missense	c.1670	p.R557H	0.970	superfamily_YVTN repeat-like/Quinoprotein amine dehydrogenase	HMMSmart_SM00320,HMMPfam_F-box,HMMSmart_SM00256,superfamily_YVTN repeat-like/Quinoprotein amine dehydrogenase,PatternScan_WD_REPEATS_1,HMMPfam_WD40,superfamily_F-box domain	-	no_errors
GPR128	84873	genome.wustl.edu	37	3	100354667	100354667	+	Silent	SNP	T	T	G	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	3	100354667	100354667	T	G	SNP	GPR128	NM_032787.2	human	genbank	58_37c	+1	validated	silent	c.594	p.P198	0.008	NULL	HMMPfam_GPS,HMMSmart_GPS,HMMPfam_7tm_2,PatternScan_G_PROTEIN_RECEP_F2_2	-	no_errors
GREB1	9687	genome.wustl.edu	37	2	11773164	11773164	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	2	11773164	11773164	G	A	SNP	GREB1	NM_014668.3	human	genbank	58_37c	+1	reviewed	missense	c.4966	p.V1656I	0.203	NULL	NULL	-	no_errors
HRAS	3265	genome.wustl.edu	37	11	534227	534227	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	11	534227	534227	G	A	SNP	HRAS	NM_001130442.1	human	genbank	58_37c	-1	reviewed	silent	c.96	p.Y32	0.951	HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
KCNJ15	3772	genome.wustl.edu	37	21	39671648	39671648	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	21	39671648	39671648	G	T	SNP	KCNJ15	NM_002243.3	human	genbank	58_37c	+1	reviewed	missense	c.465	p.L155F	0.988	HMMPfam_IRK,superfamily_Ig_E-set,superfamily_SSF81324	HMMPfam_IRK,superfamily_Ig_E-set,superfamily_SSF81324	-	no_errors
KCNN3	3782	genome.wustl.edu	37	1	154841540	154841540	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	1	154841540	154841540	C	G	SNP	KCNN3	NM_002249.4	human	genbank	58_37c	-1	reviewed	missense	c.901	p.E301Q	1.000	HMMPfam_SK_channel	HMMPfam_CaMBD,superfamily_Small-conductance potassium channel,HMMPfam_SK_channel,HMMPfam_Ion_trans_2,superfamily_Voltage-gated potassium channels	-	no_errors
KHDRBS1	10657	genome.wustl.edu	37	1	32502510	32502510	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	1	32502510	32502510	G	A	SNP	KHDRBS1	NM_006559.1	human	genbank	58_37c	+1	provisional	splice_site	c.772-1	e5-1	1.000	-	-	-	no_errors
KIAA1147	57189	genome.wustl.edu	37	7	141362534	141362534	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	7	141362534	141362534	G	C	SNP	KIAA1147	NM_001080392.1	human	genbank	58_37c	-1	provisional	missense	c.1290	p.D430E	1.000	HMMPfam_DUF2347	HMMPfam_DUF2347	-	no_errors
LOC100289169	0	genome.wustl.edu	37	16	29063669	29063669	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	16	29063669	29063669	C	G	SNP	LOC100289169	XM_002343436.1	human	genbank	58_37c	+1	model	missense	c.271	p.L91V	0.019	HMMPfam_NPIP	HMMPfam_NPIP	-	no_errors
MRPL52	122704	genome.wustl.edu	37	14	23302667	23302667	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	14	23302667	23302667	A	G	SNP	MRPL52	NM_178336.2	human	genbank	58_37c	+1	reviewed	silent	c.198	p.R66	0.995	NULL	NULL	-	no_errors
MRPS7	51081	genome.wustl.edu	37	17	73261941	73261941	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	17	73261941	73261941	G	A	SNP	MRPS7	NM_015971.3	human	genbank	58_37c	+1	reviewed	silent	c.666	p.R222	0.899	HMMPfam_Ribosomal_S7,superfamily_Ribosomal protein S7	HMMPfam_Ribosomal_S7,superfamily_Ribosomal protein S7	-	no_errors
MYH7B	57644	genome.wustl.edu	37	20	33575611	33575611	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	20	33575611	33575611	G	C	SNP	MYH7B	NM_020884.3	human	genbank	58_37c	+1	reviewed	missense	c.1436	p.R479P	1.000	HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases	PatternScan_THIOL_PROTEASE_HIS,HMMPfam_Myosin_head,HMMSmart_SM00242,HMMPfam_Myosin_tail_1,HMMPfam_Myosin_N,superfamily_Prefoldin,superfamily_tRNA-binding arm,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
NWD1	284434	genome.wustl.edu	37	19	16860842	16860842	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	19	16860842	16860842	C	T	SNP	NWD1	NM_001007525.2	human	genbank	58_37c	+1	validated	silent	c.984	p.H328	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMSmart_SM00320,superfamily_WD40 repeat-like,PatternScan_WD_REPEATS_1,HMMPfam_WD40,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
OR6C2	341416	genome.wustl.edu	37	12	55846550	55846550	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	12	55846550	55846550	A	G	SNP	OR6C2	NM_054105.1	human	genbank	58_37c	+1	provisional	missense	c.553	p.I185V	1.000	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
PARP9	83666	genome.wustl.edu	37	3	122274300	122274300	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	3	122274300	122274300	T	-	DEL	PARP9	NM_031458.2	human	genbank	58_37c	-1	validated	frame_shift_del	c.823	p.I275fs	1.000	superfamily_Macro domain-like	HMMPfam_Macro,HMMSmart_SM00506,HMMPfam_PARP,superfamily_Macro domain-like,superfamily_ADP-ribosylation	-	no_errors
PAX3	5077	genome.wustl.edu	37	2	223065949	223065949	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	2	223065949	223065949	T	C	SNP	PAX3	NM_181459.2	human	genbank	58_37c	-1	reviewed	missense	c.1462	p.I488V	0.908	NULL	HMMPfam_Homeobox,HMMSmart_SM00389,HMMPfam_PAX,HMMSmart_SM00351,PatternScan_PAIRED_1,superfamily_Homeodomain-like,PatternScan_HOMEOBOX_1	-	no_errors
PDE3B	5140	genome.wustl.edu	37	11	14853233	14853233	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	11	14853233	14853233	C	G	SNP	PDE3B	NM_000922.3	human	genbank	58_37c	+1	validated	missense	c.2004	p.D668E	0.063	superfamily_HD-domain/PDEase-like	HMMPfam_PDEase_I,PatternScan_PDEASE_I,HMMSmart_SM00471,superfamily_HD-domain/PDEase-like	-	no_errors
PLEKHG4B	153478	genome.wustl.edu	37	5	182269	182269	+	Missense_Mutation	SNP	C	C	T	rs147897190	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	5	182269	182269	C	T	SNP	PLEKHG4B	NM_052909.3	human	genbank	58_37c	+1	validated	missense	c.3647	p.S1216F	0.672	NULL	HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_DBL homology domain (DH-domain),HMMSmart_SM00233,superfamily_PH domain-like	-	no_errors
POLR1A	25885	genome.wustl.edu	37	2	86327172	86327172	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	2	86327172	86327172	G	A	SNP	POLR1A	NM_015425.3	human	genbank	58_37c	-1	validated	silent	c.201	p.C67	0.985	HMMPfam_RNA_pol_Rpb1_1,superfamily_beta and beta-prime subunits of DNA dependent RNA-polymerase	HMMPfam_RNA_pol_Rpb1_2,HMMSmart_SM00663,HMMPfam_RNA_pol_Rpb1_3,HMMPfam_RNA_pol_Rpb1_1,HMMPfam_RNA_pol_Rpb1_5,HMMPfam_RNA_pol_Rpb1_4,superfamily_beta and beta-prime subunits of DNA dependent RNA-polymerase	-	no_errors
POLR1A	25885	genome.wustl.edu	37	2	86327220	86327220	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	2	86327220	86327220	G	A	SNP	POLR1A	NM_015425.3	human	genbank	58_37c	-1	validated	silent	c.153	p.Y51	0.794	HMMPfam_RNA_pol_Rpb1_1,superfamily_beta and beta-prime subunits of DNA dependent RNA-polymerase	HMMPfam_RNA_pol_Rpb1_2,HMMSmart_SM00663,HMMPfam_RNA_pol_Rpb1_3,HMMPfam_RNA_pol_Rpb1_1,HMMPfam_RNA_pol_Rpb1_5,HMMPfam_RNA_pol_Rpb1_4,superfamily_beta and beta-prime subunits of DNA dependent RNA-polymerase	-	no_errors
PPFIA2	8499	genome.wustl.edu	37	12	81688650	81688661	+	In_Frame_Del	DEL	GGAAACCATCTC	GGAAACCATCTC	-	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	GGAAACCATCTC	GGAAACCATCTC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	12	81688650	81688661	GGAAACCATCTC	-	DEL	PPFIA2	NM_003625.2	human	genbank	58_37c	-1	reviewed	in_frame_del	c.2889_2878	p.EMVS960in_frame_del	0.970:1.000:1.000:0.994:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000	HMMPfam_SAM_1,HMMSmart_SM00454,superfamily_SAM/Pointed domain	HMMPfam_SAM_1,HMMSmart_SM00454,superfamily_SAM/Pointed domain,HMMPfam_SAM_2	-	no_errors
RBM23	55147	genome.wustl.edu	37	14	23374450	23374450	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	14	23374450	23374450	G	A	SNP	RBM23	NM_001077351.1	human	genbank	58_37c	-1	reviewed	silent	c.579	p.R193	0.983	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD	-	no_errors
RGL1	23179	genome.wustl.edu	37	1	183816895	183816895	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	1	183816895	183816895	C	T	SNP	RGL1	NM_015149.3	human	genbank	58_37c	+1	validated	silent	c.439	p.L147	0.990	HMMPfam_RasGEF_N,HMMSmart_SM00229,superfamily_Ras GEF	HMMPfam_RA,HMMSmart_SM00314,HMMPfam_RasGEF_N,HMMSmart_SM00229,HMMPfam_RasGEF,HMMSmart_SM00147,superfamily_Ras GEF,PatternScan_RASGEF,superfamily_Ubiquitin-like	-	no_errors
RMND1	55005	genome.wustl.edu	37	6	151748625	151748625	+	Silent	SNP	T	T	A	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	6	151748625	151748625	T	A	SNP	RMND1	NM_017909.2	human	genbank	58_37c	-1	validated	silent	c.822	p.I274	0.027	HMMPfam_DUF155	HMMPfam_DUF155	-	no_errors
SGK3	23678	genome.wustl.edu	37	8	67748219	67748219	+	Silent	SNP	T	T	C	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	8	67748219	67748219	T	C	SNP	SGK3	NM_001033578.1	human	genbank	58_37c	+1	reviewed	silent	c.651	p.N217	1.000	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase	HMMSmart_SM00133,HMMSmart_SM00219,HMMPfam_PX,HMMSmart_SM00312,superfamily_PX domain,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,HMMPfam_Pkinase_C	-	no_errors
SLC12A4	6560	genome.wustl.edu	37	16	67995581	67995581	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	16	67995581	67995581	G	C	SNP	SLC12A4	NM_005072.4	human	genbank	58_37c	-1	validated	missense	c.239	p.S80W	1.000	NULL	HMMPfam_AA_permease,HMMPfam_KCl_Cotrans_1	-	no_errors
SLC27A4	10999	genome.wustl.edu	37	9	131115713	131115713	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	9	131115713	131115713	A	G	SNP	SLC27A4	NM_005094.3	human	genbank	58_37c	+1	reviewed	missense	c.1217	p.N406S	1.000	HMMPfam_AMP-binding,superfamily_Acetyl-CoA synthetase-like	HMMPfam_AMP-binding,PatternScan_LIPOCALIN,PatternScan_AMP_BINDING,superfamily_Acetyl-CoA synthetase-like	-	no_errors
SLC2A4	6517	genome.wustl.edu	37	17	7187850	7187850	+	Silent	SNP	T	T	C	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	17	7187850	7187850	T	C	SNP	SLC2A4	NM_001042.2	human	genbank	58_37c	+1	reviewed	silent	c.774	p.A258	0.732	HMMPfam_Sugar_tr,superfamily_MFS_gen_substrate_transporter	HMMPfam_Sugar_tr,PatternScan_SUGAR_TRANSPORT_1,PatternScan_SUGAR_TRANSPORT_2,superfamily_MFS_gen_substrate_transporter	-	no_errors
SLC5A6	8884	genome.wustl.edu	37	2	27428252	27428252	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	2	27428252	27428252	C	G	SNP	SLC5A6	NM_021095.2	human	genbank	58_37c	-1	validated	missense	c.700	p.V234L	0.946	HMMPfam_SSF	HMMPfam_SSF,PatternScan_NA_SOLUT_SYMP_1,PatternScan_NA_SOLUT_SYMP_2	-	no_errors
SLCO1C1	53919	genome.wustl.edu	37	12	20885886	20885886	+	Silent	SNP	G	G	C	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	12	20885886	20885886	G	C	SNP	SLCO1C1	NM_017435.4	human	genbank	58_37c	+1	reviewed	silent	c.1230	p.G410	0.998	HMMPfam_OATP,superfamily_MFS_gen_substrate_transporter	HMMSmart_KAZAL,HMMPfam_OATP,HMMPfam_Kazal_2,superfamily_MFS_gen_substrate_transporter,superfamily_SSF100895	-	no_errors
SMAD6	4091	genome.wustl.edu	37	15	67073661	67073661	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	15	67073661	67073661	G	A	SNP	SMAD6	NM_005585.4	human	genbank	58_37c	+1	reviewed	missense	c.1279	p.V427M	1.000	HMMPfam_MH2,HMMSmart_SM00524,superfamily_SMAD/FHA domain	HMMPfam_MH2,HMMSmart_SM00524,HMMPfam_MH1,HMMSmart_SM00523,superfamily_SMAD/FHA domain,superfamily_SMAD MH1 domain	-	no_errors
SMCR7L	54471	genome.wustl.edu	37	22	39910045	39910045	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	22	39910045	39910045	T	C	SNP	SMCR7L	NM_019008.4	human	genbank	58_37c	+1	validated	missense	c.1109	p.I370T	1.000	NULL	NULL	-	no_errors
SNX25	83891	genome.wustl.edu	37	4	186263128	186263128	+	Splice_Site	SNP	A	A	G	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	4	186263128	186263128	A	G	SNP	SNX25	NM_031953.2	human	genbank	58_37c	+1	validated	splice_site	c.1555-2	e11-2	0.999	-	-	-	no_errors
SRRM1	10250	genome.wustl.edu	37	1	24975442	24975442	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	1	24975442	24975442	G	A	SNP	SRRM1	NM_005839.3	human	genbank	58_37c	+1	validated	silent	c.327	p.L109	1.000	HMMPfam_PWI,HMMSmart_SM00311,superfamily_PWI domain	HMMPfam_PWI,HMMSmart_SM00311,superfamily_PWI domain	-	no_errors
STK38L	23012	genome.wustl.edu	37	12	27450761	27450761	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	12	27450761	27450761	T	G	SNP	STK38L	NM_015000.3	human	genbank	58_37c	+1	validated	missense	c.108	p.I36M	0.938	NULL	HMMSmart_S_TK_X,HMMSmart_S_TKc,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,HMMPfam_Pkinase_C	-	no_errors
TCHH	7062	genome.wustl.edu	37	1	152082308	152082308	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	1	152082308	152082308	C	T	SNP	TCHH	NM_007113.2	human	genbank	58_37c	-1	provisional	missense	c.3385	p.E1129K	0.001	NULL	PatternScan_S100_CABP,HMMPfam_S_100,PatternScan_EF_HAND_1,superfamily_SSF47473	-	no_errors
TNKS1BP1	85456	genome.wustl.edu	37	11	57081323	57081323	+	Nonsense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	11	57081323	57081323	G	C	SNP	TNKS1BP1	NM_033396.2	human	genbank	58_37c	-1	validated	nonsense	c.839	p.S280*	0.099	NULL	NULL	-	no_errors
TP53	7157	genome.wustl.edu	37	17	7578263	7578263	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	17	7578263	7578263	G	A	SNP	TP53	NM_000546.4	human	genbank	58_37c	-1	reviewed	nonsense	c.586	p.R196*	1.000	superfamily_p53-like transcription factors,HMMPfam_P53	PatternScan_P53,superfamily_p53-like transcription factors,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain,HMMPfam_P53,HMMPfam_P53_TAD	-	no_errors
TPR	7175	genome.wustl.edu	37	1	186329484	186329484	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	1	186329484	186329484	G	C	SNP	TPR	NM_003292.2	human	genbank	58_37c	-1	reviewed	missense	c.1112	p.S371C	0.993	NULL	superfamily_Prefoldin,HMMPfam_TPR_MLP1_2	-	no_errors
TTF2	8458	genome.wustl.edu	37	1	117634518	117634518	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	1	117634518	117634518	G	A	SNP	TTF2	NM_003594.3	human	genbank	58_37c	+1	reviewed	silent	c.2751	p.L917	1.000	NULL	HMMPfam_SNF2_N,HMMPfam_Helicase_C,HMMSmart_SM00490,PatternScan_DEAH_ATP_HELICASE,HMMPfam_zf-GRF,HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
TYRO3	7301	genome.wustl.edu	37	15	41859670	41859670	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	15	41859670	41859670	G	A	SNP	TYRO3	NM_006293.3	human	genbank	58_37c	+1	reviewed	missense	c.896	p.R299H	1.000	HMMPfam_fn3,HMMSmart_FN3,superfamily_FN_III-like	HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,HMMSmart_IGc2,HMMSmart_IG,HMMPfam_fn3,HMMSmart_FN3,PatternScan_PROTEIN_KINASE_TYR,superfamily_FN_III-like,superfamily_Kinase_like,HMMPfam_ig,PatternScan_PROTEIN_KINASE_ATP,superfamily_SSF48726	-	no_errors
VAMP1	6843	genome.wustl.edu	37	12	6574108	6574108	+	Splice_Site	SNP	C	C	G	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	12	6574108	6574108	C	G	SNP	VAMP1	NM_014231.3	human	genbank	58_37c	-1	reviewed	splice_site	c.289-1	e4-1	1.000	-	-	-	no_errors
VAV1	7409	genome.wustl.edu	37	19	6828862	6828862	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	19	6828862	6828862	G	A	SNP	VAV1	NM_005428.2	human	genbank	58_37c	+1	reviewed	missense	c.1216	p.D406N	1.000	HMMPfam_PH,HMMSmart_PH,superfamily_SSF50729	HMMPfam_RhoGEF,HMMSmart_RhoGEF,superfamily_DH-domain,HMMPfam_SH2,HMMSmart_SH2,PatternScan_DH_1,HMMPfam_SH3_1,HMMSmart_SH3,superfamily_SH3,HMMPfam_CH,HMMSmart_CH,HMMPfam_PH,HMMSmart_PH,HMMPfam_C1_1,HMMSmart_C1,PatternScan_ZF_DAG_PE_1,superfamily_Calponin-homology,superfamily_SSF50729,superfamily_SSF55550,superfamily_SSF57889	-	no_errors
ZNF33B	7582	genome.wustl.edu	37	10	43088872	43088872	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	10	43088872	43088872	T	C	SNP	ZNF33B	NM_006955.1	human	genbank	58_37c	-1	provisional	missense	c.1526	p.K509R	0.003	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
ZNF492	57615	genome.wustl.edu	37	19	22817278	22817278	+	Splice_Site	SNP	T	T	A	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	19	22817278	22817278	T	A	SNP	ZNF492	NM_020855.2	human	genbank	58_37c	+1	validated	splice_site	c.1+2	e0+2	0.014	-	-	-	no_errors
ZNF761	388561	genome.wustl.edu	37	19	53959767	53959767	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	19	53959767	53959767	A	T	SNP	ZNF761	NM_001008401.3	human	genbank	58_37c	+1	validated	missense	c.2006	p.K669M	0.859	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_Multiheme cytochromes,superfamily_C2H2 and C2HC zinc fingers	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_Multiheme cytochromes,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZNF844	284391	genome.wustl.edu	37	19	12186728	12186728	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A2-A0D0-01A-11W-A019-09	TCGA-A2-A0D0-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3f20d0fe-aaa1-40f1-b2c1-7f070f93aef5	bbf1c43d-d7b3-4574-a074-d22ad537829c	19	12186728	12186728	C	A	SNP	ZNF844	NM_001136501.1	human	genbank	58_37c	+1	provisional	missense	c.793	p.P265T	0.000	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
