Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
A2M	2	genome.wustl.edu	37	12	9246090	9246090	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	12	9246090	9246090	C	T	SNP	A2M	NM_000014.4	human	genbank	58_37c	-1	reviewed	silent	c.2211	p.E737	1.000	NULL	HMMPfam_A2M,HMMPfam_A2M_N,superfamily_Terpenoid cyclases/Protein prenyltransferases,HMMPfam_A2M_recep,superfamily_Alpha-macroglobulin receptor domain,PatternScan_TONB_DEPENDENT_REC_1,HMMPfam_A2M_N_2,HMMPfam_A2M_comp,HMMPfam_Thiol-ester_cl,PatternScan_ALPHA_2_MACROGLOBULIN	-	no_errors
ABCF3	55324	genome.wustl.edu	37	3	183911228	183911228	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	3	183911228	183911228	C	T	SNP	ABCF3	NM_018358.2	human	genbank	58_37c	+1	validated	silent	c.1959	p.L653	1.000	HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_ABC_tran,HMMSmart_SM00382,PatternScan_ABC_TRANSPORTER_1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
ACP5	54	genome.wustl.edu	37	19	11687274	11687274	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	19	11687274	11687274	C	A	SNP	ACP5	NM_001111034.1	human	genbank	58_37c	-1	reviewed	missense	c.519	p.E173D	0.097	HMMPfam_Metallophos,superfamily_SSF56300	HMMPfam_Metallophos,superfamily_SSF56300	-	no_errors
ACSS3	79611	genome.wustl.edu	37	12	81610679	81610679	+	Splice_Site	SNP	G	G	C	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	12	81610679	81610679	G	C	SNP	ACSS3	NM_024560.2	human	genbank	58_37c	+1	validated	splice_site	c.1355-1	e10-1	1.000	-	-	-	no_errors
ACSS3	79611	genome.wustl.edu	37	12	81647325	81647325	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	12	81647325	81647325	G	A	SNP	ACSS3	NM_024560.2	human	genbank	58_37c	+1	validated	missense	c.1871	p.R624K	1.000	superfamily_Acetyl-CoA synthetase-like	HMMPfam_AMP-binding,PatternScan_AMP_BINDING,superfamily_Acetyl-CoA synthetase-like	-	no_errors
ACTB	60	genome.wustl.edu	37	7	5567953	5567953	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	7	5567953	5567953	C	T	SNP	ACTB	NM_001101.3	human	genbank	58_37c	-1	reviewed	missense	c.761	p.R254Q	0.999	HMMPfam_Actin,HMMSmart_SM00268,superfamily_Actin-like ATPase domain	HMMPfam_Actin,HMMSmart_SM00268,PatternScan_ACTINS_ACT_LIKE,PatternScan_ACTINS_1,PatternScan_ACTINS_2,superfamily_Actin-like ATPase domain	-	no_errors
ACTR6	64431	genome.wustl.edu	37	12	100604127	100604127	+	Nonsense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	12	100604127	100604127	C	G	SNP	ACTR6	NM_022496.3	human	genbank	58_37c	+1	validated	nonsense	c.570	p.Y190*	1.000	HMMPfam_Actin,HMMSmart_SM00268,superfamily_Actin-like ATPase domain	HMMPfam_Actin,HMMSmart_SM00268,superfamily_Actin-like ATPase domain	-	no_errors
AFF2	2334	genome.wustl.edu	37	X	147891430	147891430	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	X	147891430	147891430	G	A	SNP	AFF2	NM_002025.3	human	genbank	58_37c	+1	reviewed	missense	c.1072	p.E358K	1.000	HMMPfam_AF-4	HMMPfam_AF-4	-	no_errors
AKAP12	9590	genome.wustl.edu	37	6	151670325	151670325	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	6	151670325	151670325	G	C	SNP	AKAP12	NM_005100.3	human	genbank	58_37c	+1	reviewed	missense	c.799	p.E267Q	0.962	NULL	HMMPfam_WSK,HMMPfam_RII_binding_1	-	no_errors
ALPL	249	genome.wustl.edu	37	1	21889712	21889712	+	Missense_Mutation	SNP	G	G	A	rs121918011	byCluster	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	1	21889712	21889712	G	A	SNP	ALPL	NM_000478.4	human	genbank	58_37c	+1	reviewed	missense	c.407	p.R136H	0.997	HMMPfam_Alk_phosphatase,HMMSmart_alkPPc,superfamily_Alkaline_phosphatase_core	HMMPfam_Alk_phosphatase,HMMSmart_alkPPc,superfamily_Alkaline_phosphatase_core,PatternScan_ALKALINE_PHOSPHATASE	-	no_errors
ANKRD12	23253	genome.wustl.edu	37	18	9256837	9256837	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	18	9256837	9256837	G	A	SNP	ANKRD12	NM_015208.3	human	genbank	58_37c	+1	validated	missense	c.3572	p.R1191K	1.000	superfamily_Ankyrin repeat	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat	-	no_errors
ASB5	140458	genome.wustl.edu	37	4	177146416	177146416	+	Silent	SNP	T	T	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	4	177146416	177146416	T	A	SNP	ASB5	NM_080874.2	human	genbank	58_37c	-1	reviewed	silent	c.273	p.S91	1.000	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat	HMMPfam_SOCS_box,HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat	-	no_errors
ASH2L	9070	genome.wustl.edu	37	8	37996551	37996551	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	8	37996551	37996551	G	A	SNP	ASH2L	NM_004674.3	human	genbank	58_37c	+1	validated	missense	c.1849	p.E617K	1.000	NULL	HMMPfam_SPRY,HMMSmart_SM00449	-	no_errors
ATP1A3	478	genome.wustl.edu	37	19	42472978	42472978	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	19	42472978	42472978	G	A	SNP	ATP1A3	NM_152296.3	human	genbank	58_37c	-1	reviewed	silent	c.2778	p.I926	1.000	HMMPfam_Cation_ATPase_C,superfamily_SSF81665	HMMPfam_Cation_ATPase_N,HMMPfam_Hydrolase,HMMPfam_Cation_ATPase_C,HMMPfam_E1-E2_ATPase,PatternScan_ATPASE_E1_E2,superfamily_SSF56784,superfamily_SSF81653,superfamily_SSF81660,superfamily_SSF81665	-	no_errors
BAIAP2L2	80115	genome.wustl.edu	37	22	38494435	38494435	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	22	38494435	38494435	C	T	SNP	BAIAP2L2	NM_025045.4	human	genbank	58_37c	-1	validated	missense	c.331	p.D111N	1.000	HMMPfam_IMD	HMMSmart_SM00326,superfamily_SH3-domain,HMMPfam_SH3_2,HMMPfam_IMD	-	no_errors
BBS5	129880	genome.wustl.edu	37	2	170359665	170359665	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	2	170359665	170359665	G	A	SNP	BBS5	NM_152384.2	human	genbank	58_37c	+1	reviewed	missense	c.877	p.D293N	1.000	HMMPfam_DUF1448	HMMPfam_DUF1448,HMMSmart_SM00683	-	no_errors
C12orf48	55010	genome.wustl.edu	37	12	102569397	102569397	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	12	102569397	102569397	C	G	SNP	C12orf48	NM_017915.2	human	genbank	58_37c	+1	predicted	missense	c.715	p.Q239E	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases	superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
C22orf30	253143	genome.wustl.edu	37	22	32108358	32108359	+	Frame_Shift_Del	DEL	GT	GT	-	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	GT	GT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	22	32108358	32108359	GT	-	DEL	C22orf30	NM_173566.2	human	genbank	58_37c	-1	validated	frame_shift_del	c.5467_5466	p.L1823fs	0.875:0.026	NULL	NULL	-	no_errors
C4orf31	79625	genome.wustl.edu	37	4	121958518	121958518	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	4	121958518	121958518	G	C	SNP	C4orf31	NM_024574.3	human	genbank	58_37c	-1	validated	missense	c.608	p.S203C	0.998	HMMSmart_FN3,superfamily_FN_III-like	HMMSmart_FN3,superfamily_FN_III-like,HMMPfam_DUF2369	-	no_errors
C5	727	genome.wustl.edu	37	9	123737059	123737059	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	9	123737059	123737059	C	G	SNP	C5	NM_001735.2	human	genbank	58_37c	-1	reviewed	missense	c.4015	p.E1339Q	0.997	NULL	HMMPfam_ANATO,HMMSmart_ANATO,PatternScan_ANAPHYLATOXIN_1,HMMPfam_A2M,HMMPfam_A2M_N,superfamily_Terp_cyc_toroid,HMMPfam_A2M_recep,superfamily_AM_receptor_bind,HMMPfam_A2M_N_2,HMMPfam_A2M_comp,superfamily_Anaphylatoxin,HMMPfam_NTR,HMMSmart_C345C,PatternScan_ALPHA_2_MACROGLOBULIN	-	no_errors
C6orf124	653483	genome.wustl.edu	37	6	168226638	168226638	+	Silent	SNP	T	T	C	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	6	168226638	168226638	T	C	SNP	C6orf124	ENST00000357510	human	ensembl	58_37c	-1	known	5_prime_untranslated_region	c.-168226638	NULL	0.000	-	-	-	no_coding_region
C6orf124	653483	genome.wustl.edu	37	6	168226715	168226715	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	6	168226715	168226715	A	T	SNP	C6orf124	ENST00000357510	human	ensembl	58_37c	-1	known	5_prime_untranslated_region	c.-168226715	NULL	0.001	-	-	-	no_coding_region
C9orf117	286207	genome.wustl.edu	37	9	130474484	130474484	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	9	130474484	130474484	G	C	SNP	C9orf117	NM_001012502.2	human	genbank	58_37c	+1	predicted	missense	c.993	p.Q331H	0.005	NULL	NULL	-	no_errors
C9orf131	138724	genome.wustl.edu	37	9	35043674	35043674	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	9	35043674	35043674	C	A	SNP	C9orf131	NM_203299.2	human	genbank	58_37c	+1	validated	missense	c.1048	p.L350M	0.349	NULL	NULL	-	no_errors
CACNA1G	8913	genome.wustl.edu	37	17	48693656	48693656	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	17	48693656	48693656	G	T	SNP	CACNA1G	NM_018896.3	human	genbank	58_37c	+1	validated	missense	c.4932	p.K1644N	1.000	superfamily_Voltage-gated potassium channels	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels	-	no_errors
CACNA1G	8913	genome.wustl.edu	37	17	48695486	48695486	+	Silent	SNP	G	G	C	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	17	48695486	48695486	G	C	SNP	CACNA1G	ENST00000506406	human	ensembl	58_37c	+1	known	missense	c.5255	p.W1752S	0.997	NULL	HMMPfam_Ion_trans,superfamily_SSF81324	-	no_errors
CALD1	800	genome.wustl.edu	37	7	134552540	134552540	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	7	134552540	134552540	G	A	SNP	CALD1	NM_033138.3	human	genbank	58_37c	+1	reviewed	missense	c.56	p.R19Q	0.999	HMMPfam_Caldesmon	HMMPfam_Caldesmon,PatternScan_PHOSPHOPANTETHEINE	-	no_errors
CALD1	800	genome.wustl.edu	37	7	134620445	134620445	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	7	134620445	134620445	G	C	SNP	CALD1	NM_033138.3	human	genbank	58_37c	+1	reviewed	missense	c.1315	p.E439Q	1.000	HMMPfam_Caldesmon	HMMPfam_Caldesmon,PatternScan_PHOSPHOPANTETHEINE	-	no_errors
CAPN3	825	genome.wustl.edu	37	15	42703522	42703522	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	15	42703522	42703522	C	T	SNP	CAPN3	NM_000070.2	human	genbank	58_37c	+1	reviewed	silent	c.2418	p.I806	1.000	HMMSmart_SM00054,superfamily_EF-hand	PatternScan_THIOL_PROTEASE_CYS,HMMPfam_Peptidase_C2,HMMPfam_Calpain_III,HMMSmart_SM00230,HMMSmart_SM00720,superfamily_Calpain large subunit middle domain (domain III),HMMSmart_SM00054,PatternScan_EF_HAND_1,HMMPfam_efhand,superfamily_EF-hand,superfamily_Cysteine proteinases	-	no_errors
CC2D1B	200014	genome.wustl.edu	37	1	52825462	52825462	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	1	52825462	52825462	C	T	SNP	CC2D1B	NM_032449.1	human	genbank	58_37c	-1	validated	missense	c.857	p.R286Q	0.997	HMMSmart_SM00685	HMMPfam_C2,HMMSmart_SM00239,HMMSmart_SM00685,superfamily_C2 domain (Calcium/lipid-binding domain CaLB)	-	no_errors
CCDC14	64770	genome.wustl.edu	37	3	123675589	123675589	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	3	123675589	123675589	T	-	DEL	CCDC14	NM_022757.4	human	genbank	58_37c	-1	validated	frame_shift_del	c.228	p.A77fs	1.000	NULL	PatternScan_COPPER_BLUE	-	no_errors
CD72	971	genome.wustl.edu	37	9	35618081	35618081	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	9	35618081	35618081	C	T	SNP	CD72	NM_001782.2	human	genbank	58_37c	-1	validated	silent	c.120	p.E40	1.000	NULL	HMMPfam_Lectin_C,HMMSmart_SM00034,superfamily_C-type lectin-like	-	no_errors
CD72	971	genome.wustl.edu	37	9	35618271	35618271	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	9	35618271	35618271	C	T	SNP	CD72	NM_001782.2	human	genbank	58_37c	-1	validated	silent	c.30	p.L10	1.000	NULL	HMMPfam_Lectin_C,HMMSmart_SM00034,superfamily_C-type lectin-like	-	no_errors
CDC42BPA	8476	genome.wustl.edu	37	1	227216475	227216475	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	1	227216475	227216475	C	A	SNP	CDC42BPA	NM_003607.3	human	genbank	58_37c	-1	reviewed	nonsense	c.4210	p.E1404*	1.000	HMMPfam_CNH,HMMSmart_CNH	HMMSmart_PBD,HMMSmart_S_TK_X,HMMPfam_CNH,HMMSmart_CNH,HMMPfam_PH,HMMSmart_PH,HMMPfam_C1_1,HMMSmart_C1,PatternScan_ZF_DAG_PE_1,HMMSmart_S_TKc,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,HMMPfam_DMPK_coil,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,HMMPfam_Pkinase_C,PatternScan_C_TYPE_LECTIN_1,superfamily_SSF50729,superfamily_SSF57889	-	no_errors
CDC42BPB	9578	genome.wustl.edu	37	14	103465921	103465921	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	14	103465921	103465921	G	A	SNP	CDC42BPB	NM_006035.3	human	genbank	58_37c	-1	reviewed	nonsense	c.577	p.Q193*	1.000	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase	HMMPfam_PBD,HMMSmart_PBD,HMMSmart_S_TK_X,HMMPfam_CNH,HMMSmart_CNH,HMMPfam_PH,HMMSmart_PH,HMMPfam_C1_1,HMMSmart_C1,PatternScan_ZF_DAG_PE_1,HMMSmart_S_TKc,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,HMMPfam_DMPK_coil,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,HMMPfam_Pkinase_C,superfamily_SSF50729,superfamily_SSF57889	-	no_errors
CDH11	1009	genome.wustl.edu	37	16	65016037	65016037	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	16	65016037	65016037	G	A	SNP	CDH11	NM_001797.2	human	genbank	58_37c	-1	reviewed	silent	c.1167	p.I389	1.000	HMMPfam_Cadherin,superfamily_Cadherin-like	HMMPfam_Cadherin_C,HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,superfamily_Cadherin-like	-	no_errors
CEP170	9859	genome.wustl.edu	37	1	243349584	243349584	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	1	243349584	243349584	C	T	SNP	CEP170	NM_014812.2	human	genbank	58_37c	-1	reviewed	missense	c.1249	p.E417K	0.994	NULL	HMMPfam_FHA,HMMSmart_SM00240,superfamily_SMAD/FHA domain	-	no_errors
CHD5	26038	genome.wustl.edu	37	1	6202326	6202326	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	1	6202326	6202326	G	A	SNP	CHD5	NM_015557.1	human	genbank	58_37c	-1	provisional	silent	c.2298	p.R766	0.368	HMMPfam_SNF2_N,HMMSmart_DEXDc,superfamily_SSF52540	HMMPfam_SNF2_N,HMMPfam_Chromo,HMMSmart_CHROMO,PatternScan_CHROMO_1,HMMPfam_Helicase_C,HMMSmart_HELICc,HMMSmart_RING,HMMSmart_PHD,PatternScan_DEAH_ATP_HELICASE,HMMPfam_DUF1086,HMMPfam_DUF1087,superfamily_FYVE_PHD_ZnF,HMMPfam_CHDCT2,HMMPfam_CHDNT,HMMSmart_DEXDc,superfamily_Chromodomain-like,HMMPfam_PHD,superfamily_SSF52540	-	no_errors
CHN1	1123	genome.wustl.edu	37	2	175742723	175742723	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	2	175742723	175742723	C	G	SNP	CHN1	NM_001822.4	human	genbank	58_37c	-1	reviewed	missense	c.394	p.E132Q	1.000	NULL	HMMPfam_RhoGAP,HMMSmart_SM00324,HMMPfam_SH2,HMMSmart_SM00252,HMMPfam_C1_1,HMMSmart_SM00109,PatternScan_ZF_DAG_PE_1,superfamily_GTPase activation domain GAP,superfamily_SH2 domain,superfamily_Cysteine-rich domain	-	no_errors
CHRNB2	1141	genome.wustl.edu	37	1	154543986	154543986	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	1	154543986	154543986	C	T	SNP	CHRNB2	NM_000748.2	human	genbank	58_37c	+1	reviewed	silent	c.687	p.I229	1.000	HMMPfam_Neur_chan_LBD,superfamily_Nicotinic receptor ligand binding domain-like	HMMPfam_Neur_chan_memb,superfamily_Neurotransmitter-gated ion-channel transmembrane pore,HMMPfam_Neur_chan_LBD,superfamily_Nicotinic receptor ligand binding domain-like,PatternScan_NEUROTR_ION_CHANNEL	-	no_errors
CLEC14A	161198	genome.wustl.edu	37	14	38724848	38724848	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	14	38724848	38724848	G	A	SNP	CLEC14A	NM_175060.1	human	genbank	58_37c	-1	provisional	missense	c.380	p.T127M	0.607	HMMSmart_CLECT,superfamily_C-type_lectin_fold	PatternScan_ASX_HYDROXYL,HMMSmart_CLECT,HMMSmart_EGF,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_C-type_lectin_fold,PatternScan_C_TYPE_LECTIN_1,superfamily_SSF57196	-	no_errors
CLIP3	25999	genome.wustl.edu	37	19	36517498	36517498	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	19	36517498	36517498	C	T	SNP	CLIP3	NM_015526.1	human	genbank	58_37c	-1	provisional	silent	c.552	p.A184	0.053	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat	HMMPfam_CAP_GLY,PatternScan_CAP_GLY_1,HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat,superfamily_Cap-Gly domain	-	no_errors
COL4A5	1287	genome.wustl.edu	37	X	107834341	107834341	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	X	107834341	107834341	C	T	SNP	COL4A5	NM_033380.1	human	genbank	58_37c	+1	reviewed	nonsense	c.1219	p.Q407*	0.998	NULL	HMMPfam_C4,HMMSmart_C4,HMMPfam_Collagen,superfamily_C-type_lectin_fold	-	no_errors
CROT	54677	genome.wustl.edu	37	7	87020973	87020973	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	7	87020973	87020973	C	T	SNP	CROT	NM_001143935.1	human	genbank	58_37c	+1	reviewed	missense	c.1454	p.S485L	0.987	HMMPfam_Carn_acyltransf,superfamily_CoA-dependent acyltransferases	HMMPfam_Carn_acyltransf,PatternScan_ACYLTRANSF_C_1,PatternScan_ACYLTRANSF_C_2,superfamily_CoA-dependent acyltransferases	-	no_errors
CWC25	0	genome.wustl.edu	37	17	36958378	36958378	+	Silent	SNP	C	C	G	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	17	36958378	36958378	C	G	SNP	CWC25	NM_017748.3	human	genbank	58_37c	-1	provisional	silent	c.1245	p.S415	0.031	NULL	HMMPfam_Cir_N	-	no_errors
CYP3A7	1551	genome.wustl.edu	37	7	99317955	99317955	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	7	99317955	99317955	G	A	SNP	CYP3A7	NM_000765.3	human	genbank	58_37c	-1	reviewed	missense	c.299	p.S100F	0.470	HMMPfam_p450,superfamily_Cytochrome_P450	HMMPfam_p450,superfamily_Cytochrome_P450,PatternScan_CYTOCHROME_P450	-	no_errors
DAPK1	1612	genome.wustl.edu	37	9	90219926	90219926	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	9	90219926	90219926	C	T	SNP	DAPK1	NM_004938.2	human	genbank	58_37c	+1	reviewed	silent	c.120	p.A40	0.388	HMMSmart_S_TKc,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	HMMPfam_Death,HMMSmart_DEATH,HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK,HMMSmart_S_TKc,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,superfamily_DEATH_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,superfamily_SSF52540	-	no_errors
DCAF8L1	139425	genome.wustl.edu	37	X	27998944	27998944	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	X	27998944	27998944	C	A	SNP	DCAF8L1	NM_001017930.1	human	genbank	58_37c	-1	reviewed	missense	c.508	p.A170S	0.757	superfamily_WD40_like	HMMSmart_WD40,superfamily_WD40_like,PatternScan_WD_REPEATS_1,HMMPfam_WD40	-	no_errors
DCLRE1C	64421	genome.wustl.edu	37	10	14950493	14950493	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	10	14950493	14950493	C	G	SNP	DCLRE1C	NM_001033855.1	human	genbank	58_37c	-1	reviewed	missense	c.1993	p.E665Q	0.542	NULL	HMMPfam_DRMBL,superfamily_Metallo-hydrolase/oxidoreductase	-	no_errors
DDX4	54514	genome.wustl.edu	37	5	55056082	55056082	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	5	55056082	55056082	C	T	SNP	DDX4	NM_024415.2	human	genbank	58_37c	+1	validated	missense	c.182	p.S61F	1.000	NULL	PatternScan_DEAD_ATP_HELICASE,HMMPfam_Helicase_C,HMMSmart_SM00490,HMMPfam_DEAD,HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
DENND1A	57706	genome.wustl.edu	37	9	126520100	126520100	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	9	126520100	126520100	G	A	SNP	DENND1A	NM_020946.1	human	genbank	58_37c	-1	validated	missense	c.184	p.L62F	1.000	HMMPfam_uDENN,HMMSmart_SM00800	HMMPfam_DENN,HMMSmart_SM00799,HMMPfam_dDENN,HMMSmart_SM00801,HMMPfam_uDENN,HMMSmart_SM00800	-	no_errors
DHPS	1725	genome.wustl.edu	37	19	12792473	12792473	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	19	12792473	12792473	G	C	SNP	DHPS	NM_001930.2	human	genbank	58_37c	-1	reviewed	missense	c.108	p.F36L	1.000	superfamily_DHS-like NAD/FAD-binding domain	HMMPfam_DS,superfamily_DHS-like NAD/FAD-binding domain	-	no_errors
DIP2A	23181	genome.wustl.edu	37	21	47957380	47957380	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	21	47957380	47957380	G	A	SNP	DIP2A	NM_015151.3	human	genbank	58_37c	+1	reviewed	missense	c.1729	p.V577M	0.998	superfamily_Acetyl-CoA synthetase-like	HMMPfam_AMP-binding,HMMPfam_DMAP_binding,superfamily_Acetyl-CoA synthetase-like	-	no_errors
DIP2B	57609	genome.wustl.edu	37	12	51127933	51127933	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	12	51127933	51127933	G	A	SNP	DIP2B	NM_173602.2	human	genbank	58_37c	+1	validated	missense	c.3997	p.D1333N	1.000	HMMPfam_AMP-binding,superfamily_Acetyl-CoA synthetase-like	HMMPfam_AMP-binding,HMMPfam_DMAP_binding,superfamily_Acetyl-CoA synthetase-like	-	no_errors
DMXL2	23312	genome.wustl.edu	37	15	51829687	51829687	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	15	51829687	51829687	G	A	SNP	DMXL2	NM_015263.3	human	genbank	58_37c	-1	validated	nonsense	c.1615	p.Q539*	1.000	superfamily_WD40 repeat-like	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40	-	no_errors
DNAJC3	5611	genome.wustl.edu	37	13	96438207	96438207	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	13	96438207	96438207	G	A	SNP	DNAJC3	NM_006260.3	human	genbank	58_37c	+1	reviewed	missense	c.1090	p.E364K	1.000	HMMPfam_TPR_1,HMMSmart_SM00028,superfamily_TPR-like	HMMPfam_TPR_1,HMMPfam_DnaJ,HMMSmart_SM00271,superfamily_Chaperone J-domain,HMMSmart_SM00028,superfamily_TPR-like	-	no_errors
DPY19L4	286148	genome.wustl.edu	37	8	95782692	95782692	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	8	95782692	95782692	G	A	SNP	DPY19L4	NM_181787.2	human	genbank	58_37c	+1	validated	silent	c.1347	p.L449	0.981	HMMPfam_DUF2211	HMMPfam_DUF2211	-	no_errors
EFHC2	80258	genome.wustl.edu	37	X	44109464	44109464	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	X	44109464	44109464	G	T	SNP	EFHC2	ENST00000333807	human	ensembl	58_37c	-1	known	missense	c.834	p.F278L	0.998	HMMSmart_SM00676,HMMPfam_DUF1126	HMMSmart_SM00676,HMMPfam_DUF1126,superfamily_EF-hand	-	no_errors
ELP3	55140	genome.wustl.edu	37	8	27989918	27989918	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	8	27989918	27989918	C	T	SNP	ELP3	NM_018091.5	human	genbank	58_37c	+1	validated	silent	c.903	p.F301	0.960	HMMSmart_SM00729,HMMPfam_Radical_SAM,superfamily_Radical SAM enzymes	HMMPfam_Acetyltransf_1,HMMSmart_SM00729,HMMPfam_Radical_SAM,superfamily_Acyl-CoA N-acyltransferases (Nat),superfamily_Radical SAM enzymes	-	no_errors
ENSG00000185864	0	genome.wustl.edu	37	16	21858844	21858844	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	16	21858844	21858844	C	G	SNP	ENSG00000185864	ENST00000341400	human	ensembl	58_37c	-1	known	missense	c.139	p.D47H	0.004	HMMPfam_NPIP	HMMPfam_NPIP	-	no_errors
ENSG00000226315	0	genome.wustl.edu	37	X	62974216	62974216	+	RNA	SNP	G	G	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	X	62974216	62974216	G	A	SNP	ARHGEF9	NM_015185.2	human	genbank	58_37c	-1	reviewed	5_prime_untranslated_region	c.-24	NULL	1.000	-	-	-	no_errors
ENSG00000245206	0	genome.wustl.edu	37	16	70350027	70350027	+	RNA	SNP	C	C	G	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	16	70350027	70350027	C	G	SNP	ENSG00000245206	ENST00000502022	human	ensembl	58_37c	-1	known	rna	NULL	NULL	0.003	-	-	-	no_errors
ENSG00000248064	0	genome.wustl.edu	37	7	2770717	2770717	+	RNA	SNP	G	G	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	7	2770717	2770717	G	A	SNP	GNA12	ENST00000471281	human	ensembl	58_37c	-1	known	5_prime_untranslated_region	c.-2770717	NULL	0.022	-	-	-	no_coding_region
ERCC4	2072	genome.wustl.edu	37	16	14041640	14041640	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	16	14041640	14041640	C	T	SNP	ERCC4	NM_005236.2	human	genbank	58_37c	+1	reviewed	silent	c.2187	p.I729	1.000	HMMPfam_ERCC4,superfamily_Restrict_endonuc_II-like_core	HMMPfam_ERCC4,superfamily_Restrict_endonuc_II-like_core	-	no_errors
ERCC6L	54821	genome.wustl.edu	37	X	71425689	71425689	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	X	71425689	71425689	C	G	SNP	ERCC6L	NM_017669.2	human	genbank	58_37c	-1	validated	missense	c.2928	p.E976D	0.000	NULL	HMMPfam_SNF2_N,HMMPfam_Helicase_C,HMMSmart_HELICc,HMMSmart_DEXDc,superfamily_SSF52540	-	no_errors
F9	2158	genome.wustl.edu	37	X	138630621	138630621	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	X	138630621	138630621	C	T	SNP	F9	NM_000133.3	human	genbank	58_37c	+1	reviewed	missense	c.491	p.A164V	1.000	HMMPfam_EGF,HMMSmart_SM00181,PatternScan_EGF_2,superfamily_EGF/Laminin	PatternScan_ASX_HYDROXYL,HMMPfam_Gla,HMMSmart_SM00069,PatternScan_GLA_1,superfamily_GLA-domain,HMMPfam_Trypsin,HMMSmart_SM00020,HMMSmart_SM00179,HMMPfam_EGF,HMMSmart_SM00181,superfamily_Trypsin-like serine proteases,PatternScan_EGF_1,PatternScan_EGF_2,PatternScan_EGF_CA,PatternScan_TRYPSIN_HIS,PatternScan_TRYPSIN_SER,superfamily_EGF/Laminin	-	no_errors
FAM13A	10144	genome.wustl.edu	37	4	89726164	89726164	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	4	89726164	89726164	C	G	SNP	FAM13A	NM_014883.2	human	genbank	58_37c	-1	validated	missense	c.1047	p.L349F	1.000	NULL	HMMPfam_RhoGAP,HMMSmart_RhoGAP,superfamily_Rho_GAP	-	no_errors
FAM157B	0	genome.wustl.edu	37	9	141109849	141109849	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	9	141109849	141109849	C	T	SNP	FAM157B	NM_001145249.1	human	genbank	58_37c	+1	inferred	missense	c.478	p.L160F	0.029	NULL	NULL	-	no_errors
FAM54A	113115	genome.wustl.edu	37	6	136560810	136560810	+	Silent	SNP	G	G	C	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	6	136560810	136560810	G	C	SNP	FAM54A	NM_001099286.1	human	genbank	58_37c	-1	validated	silent	c.663	p.L221	0.000	HMMPfam_DUF729	HMMPfam_DUF729	-	no_errors
FBN2	2201	genome.wustl.edu	37	5	127697490	127697490	+	Missense_Mutation	SNP	C	C	T	rs150735582	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	5	127697490	127697490	C	T	SNP	FBN2	NM_001999.3	human	genbank	58_37c	-1	reviewed	missense	c.2480	p.R827Q	1.000	PatternScan_ASX_HYDROXYL,HMMSmart_SM00179,HMMSmart_SM00181,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_EGF_CA,PatternScan_EGF_CA,superfamily_EGF/Laminin	PatternScan_ASX_HYDROXYL,HMMSmart_SM00179,HMMPfam_TB,superfamily_TB module/8-cys domain,HMMPfam_EGF,HMMSmart_SM00181,superfamily_Concanavalin A-like lectins/glucanases,superfamily_Growth factor receptor domain,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF_CA,PatternScan_EGF_CA,superfamily_EGF/Laminin	-	no_errors
FBXW11	23291	genome.wustl.edu	37	5	171295750	171295750	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	5	171295750	171295750	G	A	SNP	FBXW11	NM_012300.2	human	genbank	58_37c	-1	reviewed	silent	c.1518	p.I506	1.000	HMMSmart_SM00320,superfamily_WD40 repeat-like,PatternScan_WD_REPEATS_1,HMMPfam_WD40	HMMSmart_SM00320,HMMPfam_F-box,HMMSmart_SM00256,superfamily_WD40 repeat-like,PatternScan_WD_REPEATS_1,HMMPfam_WD40,superfamily_F-box domain	-	no_errors
FBXW2	26190	genome.wustl.edu	37	9	123533674	123533674	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	9	123533674	123533674	G	A	SNP	FBXW2	NM_012164.3	human	genbank	58_37c	-1	reviewed	missense	c.1028	p.S343L	1.000	HMMSmart_SM00320,superfamily_WD40 repeat-like	HMMSmart_SM00320,HMMPfam_F-box,HMMSmart_SM00256,superfamily_WD40 repeat-like,PatternScan_WD_REPEATS_1,HMMPfam_WD40,superfamily_F-box domain	-	no_errors
FERMT3	83706	genome.wustl.edu	37	11	63986822	63986822	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	11	63986822	63986822	G	A	SNP	FERMT3	NM_178443.2	human	genbank	58_37c	+1	reviewed	missense	c.886	p.A296T	0.998	HMMPfam_FERM_M,superfamily_Second domain of FERM,HMMSmart_SM00295	HMMPfam_PH,HMMSmart_SM00233,PatternScan_FERM_2,HMMPfam_FERM_M,superfamily_Second domain of FERM,HMMSmart_SM00295,superfamily_PH domain-like	-	no_errors
FRMD4A	55691	genome.wustl.edu	37	10	13743360	13743360	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	10	13743360	13743360	G	A	SNP	FRMD4A	NM_018027.3	human	genbank	58_37c	-1	validated	silent	c.955	p.L319	1.000	HMMPfam_FERM_C,superfamily_SSF50729	HMMPfam_FERM_N,HMMPfam_FERM_C,PatternScan_FERM_1,PatternScan_FERM_2,HMMPfam_FERM_M,superfamily_FERM_3-hlx,HMMSmart_B41,superfamily_SSF50729,superfamily_SSF54236	-	no_errors
GCM2	9247	genome.wustl.edu	37	6	10874552	10874552	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	6	10874552	10874552	C	A	SNP	GCM2	NM_004752.3	human	genbank	58_37c	-1	reviewed	missense	c.1197	p.M399I	0.500	NULL	HMMPfam_GCM,superfamily_GCM_motif	-	no_errors
GOLGA1	2800	genome.wustl.edu	37	9	127674285	127674285	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	9	127674285	127674285	C	T	SNP	GOLGA1	NM_002077.3	human	genbank	58_37c	-1	reviewed	silent	c.864	p.E288	0.976	superfamily_Prefoldin	HMMPfam_GRIP,HMMSmart_SM00755,superfamily_Prefoldin	-	no_errors
GPR39	2863	genome.wustl.edu	37	2	133174867	133174867	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	2	133174867	133174867	C	T	SNP	GPR39	NM_001508.2	human	genbank	58_37c	+1	validated	silent	c.252	p.L84	0.994	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
GRIN2B	2904	genome.wustl.edu	37	12	14018978	14018978	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	12	14018978	14018978	C	T	SNP	GRIN2B	NM_000834.3	human	genbank	58_37c	-1	reviewed	silent	c.165	p.E55	1.000	superfamily_SSF53822	HMMPfam_Lig_chan,HMMSmart_PBPe,HMMPfam_NMDAR2_C,HMMPfam_Lig_chan-Glu_bd,superfamily_SSF53822,superfamily_SSF53850	-	no_errors
GRIN2C	2905	genome.wustl.edu	37	17	72850861	72850861	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	17	72850861	72850861	C	G	SNP	GRIN2C	NM_000835.3	human	genbank	58_37c	-1	reviewed	missense	c.371	p.G124A	1.000	HMMPfam_ANF_receptor,superfamily_Periplasmic binding protein-like I	HMMPfam_Lig_chan,HMMSmart_SM00079,HMMPfam_ANF_receptor,HMMPfam_Lig_chan-Glu_bd,superfamily_Periplasmic binding protein-like I,superfamily_Periplasmic binding protein-like II	-	no_errors
GTF2E2	2961	genome.wustl.edu	37	8	30472233	30472233	+	Splice_Site	SNP	C	C	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	8	30472233	30472233	C	T	SNP	GTF2E2	NM_002095.4	human	genbank	58_37c	-1	validated	splice_site	c.259-1	e3-1	1.000	-	-	-	no_errors
GYG1	2992	genome.wustl.edu	37	3	148727120	148727120	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	3	148727120	148727120	G	T	SNP	GYG1	NM_004130.3	human	genbank	58_37c	+1	validated	missense	c.539	p.R180I	1.000	HMMPfam_Glyco_transf_8,superfamily_Nucleotide-diphospho-sugar transferases	HMMPfam_Glyco_transf_8,superfamily_Nucleotide-diphospho-sugar transferases	-	no_errors
HIST1H1B	3009	genome.wustl.edu	37	6	27834879	27834879	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	6	27834879	27834879	C	G	SNP	HIST1H1B	NM_005322.2	human	genbank	58_37c	-1	reviewed	missense	c.429	p.K143N	1.000	NULL	HMMPfam_Linker_histone,HMMSmart_H15,superfamily_SSF46785	-	no_errors
HIST1H2BF	8343	genome.wustl.edu	37	6	26200015	26200015	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	6	26200015	26200015	G	A	SNP	HIST1H2BF	NM_003522.3	human	genbank	58_37c	+1	reviewed	missense	c.229	p.E77K	1.000	HMMSmart_SM00427,HMMPfam_Histone,superfamily_Histone-fold	HMMSmart_SM00427,PatternScan_HISTONE_H2B,HMMPfam_Histone,superfamily_Histone-fold	-	no_errors
HIST1H2BO	8348	genome.wustl.edu	37	6	27861510	27861510	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	6	27861510	27861510	C	T	SNP	HIST1H2BO	NM_003527.4	human	genbank	58_37c	+1	reviewed	silent	c.270	p.I90	1.000	HMMSmart_H2B,HMMPfam_Histone,superfamily_Histone-fold	HMMSmart_H2B,PatternScan_HISTONE_H2B,HMMPfam_Histone,superfamily_Histone-fold	-	no_errors
HNRNPL	3191	genome.wustl.edu	37	19	39329054	39329054	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	19	39329054	39329054	C	T	SNP	HNRNPL	NM_001533.2	human	genbank	58_37c	-1	reviewed	missense	c.1540	p.E514K	0.991	superfamily_SSF54928	HMMPfam_RRM_1,HMMSmart_RRM,superfamily_SSF54928	-	no_errors
HTT	3064	genome.wustl.edu	37	4	3162104	3162104	+	Silent	SNP	G	G	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	4	3162104	3162104	G	T	SNP	HTT	ENST00000509618	human	ensembl	58_37c	+1	known	missense	c.16	p.A6S	1.000	NULL	NULL	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region
HYDIN	54768	genome.wustl.edu	37	16	70993581	70993581	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	16	70993581	70993581	G	A	SNP	HYDIN	NM_032821.2	human	genbank	58_37c	-1	validated	silent	c.6108	p.I2036	0.997	superfamily_P-loop containing nucleoside triphosphate hydrolases	superfamily_PapD-like,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
IARS	3376	genome.wustl.edu	37	9	95043061	95043061	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	9	95043061	95043061	C	T	SNP	IARS	NM_002161.4	human	genbank	58_37c	-1	reviewed	missense	c.712	p.V238I	1.000	HMMPfam_tRNA-synt_1,superfamily_ValRS_IleRS_edit,superfamily_SSF52374	PatternScan_AA_TRNA_LIGASE_I,HMMPfam_tRNA-synt_1,superfamily_ValRS_IleRS_edit,superfamily_tRNAsyn_1a_bind,HMMPfam_Anticodon_1,superfamily_SSF52374	-	no_errors
IGSF8	93185	genome.wustl.edu	37	1	160063723	160063723	+	Silent	SNP	G	G	C	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	1	160063723	160063723	G	C	SNP	IGSF8	NM_052868.2	human	genbank	58_37c	-1	provisional	silent	c.681	p.A227	0.021	HMMSmart_SM00409,superfamily_Immunoglobulin	HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin	-	no_errors
IL1F8	27177	genome.wustl.edu	37	2	113785618	113785618	+	Silent	SNP	G	G	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	2	113785618	113785618	G	T	SNP	IL1F8	NM_173178.1	human	genbank	58_37c	-1	reviewed	silent	c.336	p.G112	0.000	HMMPfam_IL1,HMMSmart_SM00125,superfamily_Cytokine	HMMPfam_IL1,HMMSmart_SM00125,PatternScan_INTERLEUKIN_1,superfamily_Cytokine	-	no_errors
IL6	3569	genome.wustl.edu	37	7	22769293	22769293	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	7	22769293	22769293	C	A	SNP	IL6	ENST00000420258	human	ensembl	58_37c	+1	known	nonsense	c.647	p.S216*	0.000	HMMSmart_IL6	HMMPfam_IL6,HMMSmart_IL6,PatternScan_INTERLEUKIN_6,superfamily_4_helix_cytokine	-	no_errors
IPO5	3843	genome.wustl.edu	37	13	98670799	98670799	+	Missense_Mutation	SNP	G	G	A	rs9584741	byCluster;byFrequency	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	13	98670799	98670799	G	A	SNP	IPO5	NM_002271.4	human	genbank	58_37c	+1	reviewed	missense	c.2731	p.E911K	1.000	superfamily_ARM-type_fold	HMMPfam_HEAT,superfamily_ARM-type_fold	-	no_errors
IQSEC2	23096	genome.wustl.edu	37	X	53276155	53276155	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	X	53276155	53276155	C	T	SNP	IQSEC2	NM_001111125.1	human	genbank	58_37c	-1	validated	silent	c.2745	p.L915	0.998	HMMPfam_Sec7,HMMSmart_Sec7,superfamily_Sec7	HMMPfam_Sec7,HMMSmart_Sec7,superfamily_Sec7,HMMSmart_PH,superfamily_SSF50729	-	no_errors
ITGB3BP	23421	genome.wustl.edu	37	1	63920061	63920061	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	1	63920061	63920061	G	A	SNP	ITGB3BP	NM_014288.3	human	genbank	58_37c	-1	provisional	silent	c.417	p.T139	0.994	HMMPfam_NRIF3	HMMPfam_NRIF3	-	no_errors
KATNA1	11104	genome.wustl.edu	37	6	149959615	149959615	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	6	149959615	149959615	G	C	SNP	KATNA1	NM_007044.2	human	genbank	58_37c	-1	reviewed	missense	c.69	p.D23E	1.000	NULL	HMMSmart_SM00382,HMMPfam_AAA,PatternScan_AAA,HMMPfam_Vps4_C,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
KCNS2	3788	genome.wustl.edu	37	8	99440888	99440888	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	8	99440888	99440888	C	T	SNP	KCNS2	NM_020697.2	human	genbank	58_37c	+1	provisional	silent	c.681	p.F227	1.000	superfamily_Voltage-gated potassium channels	HMMSmart_SM00225,HMMPfam_K_tetra,HMMPfam_Ion_trans,superfamily_POZ domain,superfamily_Voltage-gated potassium channels	-	no_errors
KIAA1432	57589	genome.wustl.edu	37	9	5765456	5765456	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	9	5765456	5765456	C	G	SNP	KIAA1432	NM_020829.2	human	genbank	58_37c	+1	validated	missense	c.2647	p.L883V	1.000	HMMPfam_RIC1	HMMPfam_RIC1,superfamily_Amine_DH_B_like	-	no_errors
KIF4A	24137	genome.wustl.edu	37	X	69615655	69615655	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	X	69615655	69615655	G	A	SNP	KIF4A	NM_012310.4	human	genbank	58_37c	+1	reviewed	silent	c.2367	p.E789	0.975	NULL	HMMPfam_Kinesin,HMMSmart_SM00129,PatternScan_KINESIN_MOTOR_DOMAIN1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
KNTC1	9735	genome.wustl.edu	37	12	123089434	123089434	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	12	123089434	123089434	G	A	SNP	KNTC1	NM_014708.4	human	genbank	58_37c	+1	reviewed	missense	c.5186	p.R1729H	0.966	PatternScan_BZIP_BASIC,HMMPfam_Rod_C	PatternScan_BZIP_BASIC,HMMPfam_Rod_C	-	no_errors
KRT76	51350	genome.wustl.edu	37	12	53164971	53164971	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	12	53164971	53164971	A	G	SNP	KRT76	NM_015848.4	human	genbank	58_37c	-1	reviewed	silent	c.1296	p.A432	0.972	HMMPfam_Filament	superfamily_Prefoldin,HMMPfam_Filament,PatternScan_IF	-	no_errors
KRTAP6-1	337966	genome.wustl.edu	37	21	31986193	31986193	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	21	31986193	31986193	C	T	SNP	KRTAP6-1	NM_181602.1	human	genbank	58_37c	-1	validated	missense	c.31	p.G11S	0.980	NULL	NULL	-	no_errors
LAMC3	10319	genome.wustl.edu	37	9	133907491	133907491	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	9	133907491	133907491	C	T	SNP	LAMC3	NM_006059.3	human	genbank	58_37c	+1	reviewed	silent	c.738	p.D246	0.943	HMMPfam_Laminin_N,HMMSmart_LamNT	HMMPfam_Laminin_B,HMMPfam_Laminin_EGF,HMMSmart_EGF_Lam,PatternScan_EGF_LAM_1,HMMPfam_Laminin_N,HMMSmart_LamNT,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_SSF57196	-	no_errors
LGALS14	56891	genome.wustl.edu	37	19	40196643	40196643	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	19	40196643	40196643	G	T	SNP	LGALS14	NM_203471.1	human	genbank	58_37c	+1	reviewed	missense	c.96	p.M32I	0.009	superfamily_ConA_like_lec_gl	HMMPfam_Gal-bind_lectin,HMMSmart_GLECT,superfamily_ConA_like_lec_gl	-	no_errors
LINGO2	158038	genome.wustl.edu	37	9	27950415	27950415	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	9	27950415	27950415	C	T	SNP	LINGO2	NM_152570.1	human	genbank	58_37c	-1	provisional	silent	c.255	p.E85	1.000	HMMPfam_LRR_1,superfamily_SSF52058	HMMPfam_LRRNT,HMMSmart_LRRNT,HMMSmart_LRRCT,HMMPfam_LRR_1,HMMSmart_LRR_TYP,HMMSmart_IGc2,HMMPfam_I-set,superfamily_SSF48726,superfamily_SSF52058	-	no_errors
LMAN1L	79748	genome.wustl.edu	37	15	75111590	75111590	+	Nonsense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	15	75111590	75111590	C	G	SNP	LMAN1L	NM_021819.2	human	genbank	58_37c	+1	validated	nonsense	c.695	p.S232*	0.985	HMMPfam_Lectin_leg-like,superfamily_Concanavalin A-like lectins/glucanases	HMMPfam_Lectin_leg-like,superfamily_Concanavalin A-like lectins/glucanases	-	no_errors
LMO2	4005	genome.wustl.edu	37	11	33886164	33886164	+	Missense_Mutation	SNP	G	G	A	rs145191677	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	11	33886164	33886164	G	A	SNP	LMO2	NM_005574.3	human	genbank	58_37c	-1	reviewed	missense	c.448	p.R150W	1.000	HMMPfam_LIM,HMMSmart_SM00132,superfamily_Glucocorticoid receptor-like (DNA-binding domain)	HMMPfam_LIM,HMMSmart_SM00132,PatternScan_LIM_DOMAIN_1,superfamily_Glucocorticoid receptor-like (DNA-binding domain)	-	no_errors
LOC100133070	0	genome.wustl.edu	37	19	4793216	4793216	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	19	4793216	4793216	C	T	SNP	LOC100133070	XM_001719147.1	human	genbank	58_37c	-1	model	missense	c.520	p.G174S	0.101	NULL	NULL	-	no_errors
LOC100288229	0	genome.wustl.edu	37	17	43625554	43625554	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	17	43625554	43625554	G	A	SNP	LOC100288229	XM_002343565.1	human	genbank	58_37c	-1	model	silent	c.2148	p.A716	0.002	NULL	NULL	-	no_errors
LOC642357	642357	genome.wustl.edu	37	X	114937577	114937577	+	RNA	SNP	G	G	C	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	X	114937577	114937577	G	C	SNP	LOC642357	XR_016681.3	human	genbank	58_37c	+1	model	rna	NULL	NULL	1.000	-	-	-	no_errors
LOC643677	643677	genome.wustl.edu	37	13	103390519	103390519	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	13	103390519	103390519	C	T	SNP	LOC643677	XM_002344085.1	human	genbank	58_37c	-1	model	silent	c.12315	p.L4105	0.000	NULL	NULL	-	no_errors
LOC643677	643677	genome.wustl.edu	37	13	103399536	103399536	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	13	103399536	103399536	C	T	SNP	LOC643677	XM_002344085.1	human	genbank	58_37c	-1	model	missense	c.3298	p.E1100K	0.000	NULL	NULL	-	no_errors
LONRF3	79836	genome.wustl.edu	37	X	118123503	118123503	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	X	118123503	118123503	G	C	SNP	LONRF3	NM_001031855.1	human	genbank	58_37c	+1	reviewed	missense	c.1192	p.E398Q	0.244	superfamily_TPR-like	HMMPfam_TPR_1,HMMSmart_SM00184,HMMPfam_LON,HMMSmart_SM00464,PatternScan_ZF_RING_1,HMMPfam_zf-C3HC4,HMMSmart_SM00028,superfamily_TPR-like,superfamily_RING/U-box	-	no_errors
LTB4R2	56413	genome.wustl.edu	37	14	24780814	24780814	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	14	24780814	24780814	G	A	SNP	LTB4R2	NM_019839.4	human	genbank	58_37c	+1	validated	missense	c.1037	p.R346Q	0.816	NULL	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
LTBP1	4052	genome.wustl.edu	37	2	33477830	33477830	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	2	33477830	33477830	C	T	SNP	LTBP1	NM_206943.2	human	genbank	58_37c	+1	reviewed	missense	c.2086	p.H696Y	1.000	HMMPfam_TB,superfamily_TB module/8-cys domain	PatternScan_ASX_HYDROXYL,HMMSmart_SM00179,HMMPfam_TB,superfamily_TB module/8-cys domain,HMMPfam_EGF,HMMSmart_SM00181,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF_CA,PatternScan_EGF_CA,superfamily_EGF/Laminin	-	no_errors
MAGIX	79917	genome.wustl.edu	37	X	49021148	49021148	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	X	49021148	49021148	C	T	SNP	MAGIX	ENST00000376338	human	ensembl	58_37c	+1	known	missense	c.50	p.S17L	0.000	NULL	HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like	-	no_errors
MALT1	10892	genome.wustl.edu	37	18	56412910	56412910	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	18	56412910	56412910	G	A	SNP	MALT1	NM_006785.2	human	genbank	58_37c	+1	reviewed	missense	c.1924	p.D642N	1.000	NULL	HMMSmart_SM00408,HMMSmart_SM00409,superfamily_DEATH domain,HMMPfam_Peptidase_C14,HMMPfam_ig,superfamily_Immunoglobulin,superfamily_Caspase-like	-	no_errors
MARK1	4139	genome.wustl.edu	37	1	220835278	220835278	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	1	220835278	220835278	G	C	SNP	MARK1	NM_018650.3	human	genbank	58_37c	+1	validated	missense	c.2158	p.E720Q	1.000	superfamily_Kinase associated domain 1 KA1	HMMPfam_UBA,HMMSmart_SM00219,HMMPfam_KA1,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),HMMSmart_SM00165,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,superfamily_Kinase associated domain 1 KA1	-	no_errors
MBTPS2	51360	genome.wustl.edu	37	X	21857900	21857900	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	X	21857900	21857900	C	T	SNP	MBTPS2	NM_015884.3	human	genbank	58_37c	+1	reviewed	silent	c.48	p.V16	0.958	NULL	PatternScan_ZINC_PROTEASE,HMMPfam_Peptidase_M50	-	no_errors
MFSD11	79157	genome.wustl.edu	37	17	74763467	74763467	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	17	74763467	74763467	G	A	SNP	MFSD11	NM_024311.2	human	genbank	58_37c	+1	provisional	splice_site	c.683-1	e9-1	1.000	-	-	-	no_errors
MIR124-1	0	genome.wustl.edu	37	8	9760950	9760950	+	RNA	SNP	C	C	G	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	8	9760950	9760950	C	G	SNP	MIR124-1	ENST00000385275	human	ensembl	58_37c	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors
MLL	4297	genome.wustl.edu	37	11	118375222	118375222	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	11	118375222	118375222	C	T	SNP	MLL	NM_005933.2	human	genbank	58_37c	+1	validated	missense	c.8606	p.S2869L	0.999	NULL	PatternScan_HMGI_Y,HMMPfam_SET,HMMSmart_SM00317,HMMSmart_SM00297,superfamily_Bromodomain,HMMSmart_SM00249,HMMPfam_zf-CXXC,HMMSmart_SM00508,HMMPfam_FYRN,HMMPfam_FYRC,superfamily_FYVE/PHD zinc finger,PatternScan_RECR,HMMPfam_AT_hook,PatternScan_EF_HAND_1,HMMSmart_SM00542,HMMSmart_SM00541,PatternScan_ZF_PHD_1,HMMPfam_PHD,superfamily_SET domain	-	no_errors
MRPS9	64965	genome.wustl.edu	37	2	105713761	105713761	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	2	105713761	105713761	G	A	SNP	MRPS9	NM_182640.2	human	genbank	58_37c	+1	reviewed	missense	c.1078	p.E360K	1.000	HMMPfam_Ribosomal_S9,superfamily_Ribosomal_S5_D2-typ_fold	HMMPfam_Ribosomal_S9,superfamily_Ribosomal_S5_D2-typ_fold,PatternScan_RIBOSOMAL_S9	-	no_errors
MTHFD2	10797	genome.wustl.edu	37	2	74425784	74425784	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	2	74425784	74425784	C	T	SNP	MTHFD2	NM_006636.3	human	genbank	58_37c	+1	reviewed	silent	c.16	p.L6	0.000	NULL	HMMPfam_THF_DHG_CYH,HMMPfam_THF_DHG_CYH_C,PatternScan_THF_DHG_CYH_1,PatternScan_THF_DHG_CYH_2,superfamily_NAD(P)-bd,superfamily_SSF53223	-	no_errors
MUC17	140453	genome.wustl.edu	37	7	100684341	100684341	+	Nonsense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	7	100684341	100684341	C	G	SNP	MUC17	NM_001040105.1	human	genbank	58_37c	+1	provisional	nonsense	c.9644	p.S3215*	0.001	NULL	HMMPfam_SEA,HMMSmart_SM00200,PatternScan_EGF_1,superfamily_EGF/Laminin,superfamily_SEA domain	-	no_errors
MYLK	4638	genome.wustl.edu	37	3	123456342	123456342	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	3	123456342	123456342	T	G	SNP	MYLK	NM_053025.3	human	genbank	58_37c	-1	reviewed	missense	c.637	p.N213H	0.979	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin	HMMSmart_SM00219,HMMSmart_SM00220,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,PatternScan_PROTEIN_KINASE_ST,superfamily_Fibronectin type III,superfamily_Protein kinase-like (PK-like),HMMPfam_I-set,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,superfamily_Immunoglobulin	-	no_errors
MYO9A	4649	genome.wustl.edu	37	15	72141301	72141301	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	15	72141301	72141301	T	A	SNP	MYO9A	NM_006901.2	human	genbank	58_37c	-1	validated	missense	c.6722	p.E2241V	1.000	HMMSmart_SM00324,superfamily_GTPase activation domain GAP	HMMPfam_IQ,HMMSmart_SM00015,HMMPfam_RA,HMMSmart_SM00314,HMMPfam_RhoGAP,HMMSmart_SM00324,HMMPfam_Myosin_head,HMMSmart_SM00242,HMMPfam_C1_1,HMMSmart_SM00109,PatternScan_ZF_DAG_PE_1,superfamily_GTPase activation domain GAP,superfamily_P-loop containing nucleoside triphosphate hydrolases,superfamily_Cysteine-rich domain	-	no_errors
N4BP2	55728	genome.wustl.edu	37	4	40127807	40127807	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	4	40127807	40127807	C	G	SNP	N4BP2	ENST00000513269	human	ensembl	58_37c	+1	known	nonsense	c.3323	p.S1108*	1.000	NULL	HMMPfam_Smr,HMMSmart_SM00463,HMMPfam_DUF1771,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region
NEB	4703	genome.wustl.edu	37	2	152467080	152467080	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	2	152467080	152467080	C	G	SNP	NEB	NM_004543.4	human	genbank	58_37c	-1	reviewed	missense	c.11239	p.D3747H	1.000	HMMPfam_Nebulin,HMMSmart_SM00227	HMMPfam_Nebulin,HMMSmart_SM00227,HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain	-	no_errors
NLRC5	84166	genome.wustl.edu	37	16	57075469	57075469	+	Silent	SNP	C	C	T	rs145670367	byFrequency	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	16	57075469	57075469	C	T	SNP	NLRC5	NM_032206.3	human	genbank	58_37c	+1	validated	silent	c.3012	p.L1004	0.000	HMMSmart_SM00368,superfamily_RNI-like	HMMPfam_LRR_1,HMMSmart_SM00368,HMMSmart_SM00367,HMMPfam_NACHT,superfamily_RNI-like,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
NLRP13	126204	genome.wustl.edu	37	19	56424553	56424553	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	19	56424553	56424553	G	A	SNP	NLRP13	NM_176810.2	human	genbank	58_37c	-1	validated	silent	c.630	p.D210	0.000	NULL	HMMPfam_LRR_1,HMMPfam_PAAD_DAPIN,HMMPfam_NACHT,superfamily_DEATH_like,superfamily_SSF52047	-	no_errors
NLRP7	199713	genome.wustl.edu	37	19	55451001	55451001	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	19	55451001	55451001	G	A	SNP	NLRP7	NM_001127255.1	human	genbank	58_37c	-1	reviewed	missense	c.1186	p.R396C	0.039	NULL	HMMSmart_SM00368,HMMPfam_PAAD_DAPIN,HMMPfam_NACHT,superfamily_DEATH domain,superfamily_RNI-like,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
NOD2	64127	genome.wustl.edu	37	16	50744980	50744980	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	16	50744980	50744980	C	T	SNP	NOD2	NM_022162.1	human	genbank	58_37c	+1	reviewed	silent	c.1158	p.F386	1.000	HMMPfam_NACHT,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_CARD,HMMPfam_LRR_1,HMMSmart_SM00368,HMMPfam_NACHT,superfamily_DEATH domain,superfamily_RNI-like,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
NRCAM	4897	genome.wustl.edu	37	7	107823364	107823364	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	7	107823364	107823364	G	T	SNP	NRCAM	NM_001037132.1	human	genbank	58_37c	-1	reviewed	missense	c.2305	p.P769T	1.000	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III	PatternScan_IG_MHC,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,HMMPfam_I-set,HMMPfam_ig,superfamily_Immunoglobulin	-	no_errors
OBSL1	23363	genome.wustl.edu	37	2	220418356	220418356	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	2	220418356	220418356	G	A	SNP	OBSL1	NM_015311.2	human	genbank	58_37c	-1	reviewed	silent	c.4929	p.G1643	0.974	HMMSmart_IG,HMMPfam_ig,superfamily_SSF48726	HMMSmart_IGc2,HMMSmart_IG,HMMPfam_fn3,HMMSmart_FN3,superfamily_FN_III-like,HMMPfam_I-set,HMMPfam_V-set,HMMPfam_ig,superfamily_SSF48726	-	no_errors
OCRL	4952	genome.wustl.edu	37	X	128674765	128674765	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	X	128674765	128674765	C	T	SNP	OCRL	NM_000276.3	human	genbank	58_37c	+1	reviewed	silent	c.84	p.C28	0.991	NULL	HMMPfam_RhoGAP,HMMSmart_SM00324,HMMSmart_SM00128,HMMPfam_Exo_endo_phos,superfamily_DNase I-like,superfamily_GTPase activation domain GAP	-	no_errors
OR4D11	219986	genome.wustl.edu	37	11	59271218	59271218	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	11	59271218	59271218	C	A	SNP	OR4D11	NM_001004706.1	human	genbank	58_37c	+1	provisional	missense	c.170	p.T57N	0.971	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
PABPC3	5042	genome.wustl.edu	37	13	25670378	25670378	+	Nonsense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	13	25670378	25670378	C	G	SNP	PABPC3	NM_030979.2	human	genbank	58_37c	+1	validated	nonsense	c.42	p.Y14*	1.000	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD	HMMPfam_RRM_1,HMMSmart_SM00360,HMMPfam_PABP,HMMSmart_SM00517,superfamily_PABC (PABP) domain,HMMSmart_SM00361,superfamily_RNA-binding domain RBD	-	no_errors
PAG1	55824	genome.wustl.edu	37	8	81888988	81888988	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	8	81888988	81888988	C	T	SNP	PAG1	NM_018440.3	human	genbank	58_37c	-1	reviewed	missense	c.1090	p.D364N	0.998	NULL	NULL	-	no_errors
PARP4	143	genome.wustl.edu	37	13	25021216	25021216	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	13	25021216	25021216	C	T	SNP	PARP4	NM_006437.3	human	genbank	58_37c	-1	reviewed	missense	c.3223	p.V1075M	0.974	NULL	HMMPfam_BRCT,HMMSmart_BRCT,superfamily_BRCT,HMMPfam_VWA,HMMSmart_VWA,superfamily_PARP_reg,HMMSmart_VIT,HMMPfam_PARP,HMMPfam_VIT,superfamily_SSF53300,superfamily_SSF56399	-	no_errors
PATL2	197135	genome.wustl.edu	37	15	44965451	44965451	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	15	44965451	44965451	G	A	SNP	PATL2	NM_001145112.1	human	genbank	58_37c	-1	validated	missense	c.428	p.S143L	0.924	NULL	HMMPfam_PAT1	-	no_errors
PCF11	51585	genome.wustl.edu	37	11	82876651	82876651	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	11	82876651	82876651	C	T	SNP	PCF11	NM_015885.3	human	genbank	58_37c	+1	validated	missense	c.712	p.L238F	1.000	NULL	HMMSmart_SM00582,HMMPfam_DUF618,superfamily_ENTH/VHS domain	-	no_errors
PCNXL2	80003	genome.wustl.edu	37	1	233121777	233121777	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	1	233121777	233121777	C	T	SNP	PCNXL2	ENST00000344698	human	ensembl	58_37c	-1	known	missense	c.2257	p.E753K	0.000	NULL	HMMPfam_Pecanex_C	-	no_errors
PDCD11	22984	genome.wustl.edu	37	10	105160163	105160163	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	10	105160163	105160163	G	A	SNP	PDCD11	NM_014976.1	human	genbank	58_37c	+1	validated	missense	c.112	p.E38K	1.000	NULL	HMMPfam_S1,HMMSmart_HAT,superfamily_Nucleic_acid_OB,HMMSmart_S1,superfamily_SSF48452	-	no_errors
PDCD6	10016	genome.wustl.edu	37	5	272878	272878	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	5	272878	272878	C	G	SNP	PDCD6	NM_013232.3	human	genbank	58_37c	+1	reviewed	missense	c.154	p.L52V	0.007	HMMSmart_EFh,HMMPfam_efhand,superfamily_SSF47473	HMMSmart_EFh,PatternScan_EF_HAND_1,HMMPfam_efhand,superfamily_SSF47473	-	no_errors
PDHA1	5160	genome.wustl.edu	37	X	19373834	19373834	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	X	19373834	19373834	G	A	SNP	PDHA1	NM_000284.3	human	genbank	58_37c	+1	reviewed	missense	c.790	p.E264K	1.000	HMMPfam_E1_dh,superfamily_Thiamin diphosphate-binding fold (THDP-binding)	HMMPfam_E1_dh,superfamily_Thiamin diphosphate-binding fold (THDP-binding)	-	no_errors
PDZD11	51248	genome.wustl.edu	37	X	69509159	69509159	+	Silent	SNP	C	C	T	rs192256637	by1000genomes	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	X	69509159	69509159	C	T	SNP	PDZD11	NM_016484.4	human	genbank	58_37c	-1	validated	silent	c.33	p.P11	0.170	NULL	HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like	-	no_errors
PELI1	57162	genome.wustl.edu	37	2	64321937	64321937	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	2	64321937	64321937	G	A	SNP	PELI1	NM_020651.3	human	genbank	58_37c	-1	validated	missense	c.1156	p.H386Y	1.000	HMMPfam_Pellino	HMMPfam_Pellino	-	no_errors
PIK3CA	5290	genome.wustl.edu	37	3	178917478	178917478	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	3	178917478	178917478	G	A	SNP	PIK3CA	NM_006218.2	human	genbank	58_37c	+1	reviewed	missense	c.353	p.G118D	1.000	superfamily_SSF54236	HMMSmart_C2,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,HMMPfam_PI3Ka,HMMSmart_PI3Ka,HMMPfam_PI3K_C2,HMMSmart_PI3K_C2,HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_C2_CaLB,superfamily_Kinase_like,superfamily_ARM-type_fold,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2,superfamily_SSF54236	-	no_errors
PLAGL2	5326	genome.wustl.edu	37	20	30784659	30784659	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	20	30784659	30784659	G	C	SNP	PLAGL2	NM_002657.3	human	genbank	58_37c	-1	reviewed	missense	c.1087	p.L363V	1.000	NULL	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
POLR3K	51728	genome.wustl.edu	37	16	103518	103518	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	16	103518	103518	G	A	SNP	POLR3K	NM_016310.2	human	genbank	58_37c	-1	reviewed	silent	c.69	p.F23	1.000	HMMPfam_RNA_POL_M_15KD,HMMSmart_RPOL9,PatternScan_RNA_POL_M_15KD	HMMPfam_TFIIS_C,HMMSmart_ZnF_C2C2,PatternScan_ZF_TFIIS_1,HMMPfam_RNA_POL_M_15KD,HMMSmart_RPOL9,PatternScan_RNA_POL_M_15KD,superfamily_SSF57783	-	no_errors
PPP1R7	5510	genome.wustl.edu	37	2	242089920	242089920	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	2	242089920	242089920	G	A	SNP	PPP1R7	NM_002712.1	human	genbank	58_37c	+1	provisional	missense	c.10	p.E4K	0.987	NULL	HMMPfam_LRR_1,HMMSmart_SM00369,HMMSmart_SM00446,HMMSmart_SM00365,superfamily_L domain-like	-	no_errors
PPP2R3A	5523	genome.wustl.edu	37	3	135722043	135722043	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	3	135722043	135722043	C	T	SNP	PPP2R3A	NM_002718.3	human	genbank	58_37c	+1	reviewed	missense	c.1703	p.S568L	0.989	NULL	PatternScan_EF_HAND_1,superfamily_EF-hand	-	no_errors
PRKDC	5591	genome.wustl.edu	37	8	48839893	48839893	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	8	48839893	48839893	C	T	SNP	PRKDC	ENST00000314191	human	ensembl	58_37c	-1	known	silent	c.2280	p.L760	1.000	superfamily_ARM repeat	HMMPfam_HEAT,HMMPfam_PI3_PI4_kinase,HMMSmart_SM00146,HMMPfam_FAT,HMMPfam_FATC,superfamily_Protein kinase-like (PK-like),HMMPfam_NUC194,superfamily_ARM repeat,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2	-	no_errors
PROM2	150696	genome.wustl.edu	37	2	95952919	95952919	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	2	95952919	95952919	G	A	SNP	PROM2	NM_144707.2	human	genbank	58_37c	+1	reviewed	silent	c.2133	p.L711	0.013	HMMPfam_Prominin	HMMPfam_Prominin,PatternScan_PA2_HIS	-	no_errors
PTGFRN	5738	genome.wustl.edu	37	1	117484574	117484574	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	1	117484574	117484574	G	A	SNP	PTGFRN	NM_020440.2	human	genbank	58_37c	+1	provisional	missense	c.287	p.R96Q	0.119	HMMSmart_SM00406,HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin	HMMSmart_SM00406,HMMSmart_SM00409,HMMPfam_V-set,HMMPfam_ig,superfamily_Immunoglobulin	-	no_errors
PTK6	5753	genome.wustl.edu	37	20	62163969	62163969	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	20	62163969	62163969	G	A	SNP	PTK6	NM_005975.2	human	genbank	58_37c	-1	reviewed	silent	c.742	p.L248	0.974	HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,superfamily_Kinase_like	HMMPfam_SH2,HMMSmart_SH2,HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,HMMPfam_SH3_1,HMMSmart_SH3,superfamily_SH3,PatternScan_PROTEIN_KINASE_TYR,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,superfamily_SSF55550	-	no_errors
QSER1	79832	genome.wustl.edu	37	11	32955397	32955397	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	11	32955397	32955397	C	G	SNP	QSER1	NM_001076786.1	human	genbank	58_37c	+1	provisional	missense	c.2206	p.L736V	1.000	NULL	NULL	-	no_errors
QSER1	79832	genome.wustl.edu	37	11	32955563	32955563	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	11	32955563	32955563	C	G	SNP	QSER1	NM_001076786.1	human	genbank	58_37c	+1	provisional	missense	c.2372	p.S791C	1.000	NULL	NULL	-	no_errors
RBM25	58517	genome.wustl.edu	37	14	73576159	73576159	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	14	73576159	73576159	C	G	SNP	RBM25	NM_021239.2	human	genbank	58_37c	+1	validated	missense	c.1651	p.L551V	0.927	NULL	HMMPfam_RRM_1,HMMSmart_SM00360,HMMPfam_PWI,HMMSmart_SM00311,superfamily_PWI domain,superfamily_RNA-binding domain RBD	-	no_errors
RCBTB2	1102	genome.wustl.edu	37	13	49089446	49089446	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	13	49089446	49089446	C	T	SNP	RCBTB2	NM_001268.2	human	genbank	58_37c	-1	reviewed	missense	c.244	p.D82N	1.000	superfamily_RCC1/BLIP-II	HMMSmart_SM00225,HMMPfam_RCC1,PatternScan_RCC1_2,superfamily_RCC1/BLIP-II,superfamily_POZ domain,HMMPfam_BTB	-	no_errors
RFFL	117584	genome.wustl.edu	37	17	33344550	33344550	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	17	33344550	33344550	C	T	SNP	RFFL	NM_001017368.1	human	genbank	58_37c	-1	validated	missense	c.667	p.E223K	0.996	NULL	HMMSmart_SM00184,superfamily_FYVE/PHD zinc finger,superfamily_RING/U-box,superfamily_SAP domain	-	no_errors
RGAG1	57529	genome.wustl.edu	37	X	109694797	109694797	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	X	109694797	109694797	G	A	SNP	RGAG1	NM_020769.2	human	genbank	58_37c	+1	validated	missense	c.952	p.E318K	0.009	NULL	HMMPfam_Retrotrans_gag	-	no_errors
RIN2	54453	genome.wustl.edu	37	20	19955639	19955639	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	20	19955639	19955639	C	G	SNP	RIN2	NM_018993.2	human	genbank	58_37c	+1	reviewed	missense	c.970	p.R324G	1.000	NULL	HMMPfam_RA,HMMSmart_SM00314,HMMPfam_VPS9,HMMSmart_SM00167,superfamily_VPS9 domain (Pfam 02204),superfamily_SH2 domain	-	no_errors
ROPN1	54763	genome.wustl.edu	37	3	123694230	123694230	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	3	123694230	123694230	C	T	SNP	ROPN1	NM_017578.2	human	genbank	58_37c	-1	provisional	missense	c.392	p.G131E	1.000	NULL	HMMPfam_RIIa,superfamily_Dimerization-anchoring domain of cAMP-dependent type II PK regulatory subunit	-	no_errors
RPTOR	57521	genome.wustl.edu	37	17	78923268	78923268	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	17	78923268	78923268	G	A	SNP	RPTOR	NM_020761.2	human	genbank	58_37c	+1	reviewed	silent	c.3291	p.K1097	1.000	HMMSmart_SM00320,superfamily_WD40 repeat-like	HMMPfam_HEAT,HMMSmart_SM00320,superfamily_WD40 repeat-like,superfamily_ARM repeat,HMMPfam_WD40	-	no_errors
RYR3	6263	genome.wustl.edu	37	15	34094087	34094087	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	15	34094087	34094087	G	A	SNP	RYR3	NM_001036.3	human	genbank	58_37c	+1	validated	silent	c.9936	p.E3312	1.000	NULL	HMMPfam_RYDR_ITPR,HMMPfam_RyR,HMMPfam_MIR,superfamily_MIR domain (Pfam 02815),HMMPfam_SPRY,HMMPfam_Ion_trans,HMMPfam_RR_TM4-6,HMMPfam_RIH_assoc,HMMPfam_Ins145_P3_rec,HMMSmart_SM00472,HMMPfam_efhand,HMMSmart_SM00449,superfamily_EF-hand	-	no_errors
SALL4	57167	genome.wustl.edu	37	20	50405595	50405595	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	20	50405595	50405595	C	T	SNP	SALL4	NM_020436.3	human	genbank	58_37c	-1	reviewed	silent	c.2547	p.S849	0.000	NULL	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
SETX	23064	genome.wustl.edu	37	9	135173682	135173682	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	9	135173682	135173682	C	T	SNP	SETX	NM_015046.5	human	genbank	58_37c	-1	reviewed	missense	c.5566	p.E1856K	0.885	NULL	superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
SETX	23064	genome.wustl.edu	37	9	135203024	135203024	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	9	135203024	135203024	C	T	SNP	SETX	NM_015046.5	human	genbank	58_37c	-1	reviewed	missense	c.3961	p.D1321N	0.014	NULL	superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
SGSM1	129049	genome.wustl.edu	37	22	25301121	25301121	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	22	25301121	25301121	C	G	SNP	SGSM1	NM_001039948.2	human	genbank	58_37c	+1	validated	missense	c.2950	p.L984V	1.000	HMMPfam_TBC,HMMSmart_SM00164,superfamily_Ypt/Rab-GAP domain of gyp1p	HMMPfam_TBC,HMMSmart_SM00164,superfamily_Ypt/Rab-GAP domain of gyp1p,HMMPfam_RUN,HMMSmart_SM00593	-	no_errors
SHANK1	50944	genome.wustl.edu	37	19	51215349	51215349	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	19	51215349	51215349	G	A	SNP	SHANK1	NM_016148.2	human	genbank	58_37c	-1	validated	missense	c.815	p.S272F	1.000	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat	HMMSmart_SM00326,superfamily_SH3-domain,HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like,HMMPfam_SAM_1,HMMSmart_SM00454,HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat,superfamily_SAM/Pointed domain,HMMPfam_SH3_2	-	no_errors
SI	6476	genome.wustl.edu	37	3	164712085	164712085	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	3	164712085	164712085	G	T	SNP	SI	NM_001041.3	human	genbank	58_37c	-1	reviewed	missense	c.4801	p.H1601N	1.000	HMMPfam_Glyco_hydro_31	HMMPfam_Glyco_hydro_31,PatternScan_GLYCOSYL_HYDROL_F31_1,PatternScan_GLYCOSYL_HYDROL_F31_2,HMMPfam_Trefoil,HMMSmart_SM00018,superfamily_Trefoil,superfamily_(Trans)glycosidases,PatternScan_P_TREFOIL	-	no_errors
SLC12A3	6559	genome.wustl.edu	37	16	56924230	56924230	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	16	56924230	56924230	G	A	SNP	SLC12A3	NM_000339.2	human	genbank	58_37c	+1	reviewed	missense	c.2330	p.R777Q	0.606	NULL	HMMPfam_AA_permease,HMMPfam_AA_permease_N	-	no_errors
SLC13A4	26266	genome.wustl.edu	37	7	135366339	135366339	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	7	135366339	135366339	C	G	SNP	SLC13A4	NM_012450.2	human	genbank	58_37c	-1	validated	missense	c.1853	p.R618T	0.045	NULL	HMMPfam_Na_sulph_symp	-	no_errors
SLC38A1	81539	genome.wustl.edu	37	12	46600987	46600987	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	12	46600987	46600987	C	A	SNP	SLC38A1	NM_001077484.1	human	genbank	58_37c	-1	validated	nonsense	c.514	p.E172*	1.000	HMMPfam_Aa_trans	HMMPfam_Aa_trans	-	no_errors
SMC2	10592	genome.wustl.edu	37	9	106862469	106862469	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	9	106862469	106862469	G	A	SNP	SMC2	NM_001042550.1	human	genbank	58_37c	+1	validated	silent	c.576	p.L192	1.000	HMMPfam_SMC_N,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_SMC_N,HMMPfam_SMC_hinge,superfamily_Smc hinge domain,PatternScan_ABC_TRANSPORTER_1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
SMC6	79677	genome.wustl.edu	37	2	17897524	17897524	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	2	17897524	17897524	C	A	SNP	SMC6	NM_001142286.1	human	genbank	58_37c	-1	validated	nonsense	c.1354	p.E452*	1.000	HMMPfam_SMC_N,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_SMC_N,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
SNX24	28966	genome.wustl.edu	37	5	122337115	122337115	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	5	122337115	122337115	A	G	SNP	SNX24	NM_014035.2	human	genbank	58_37c	+1	validated	silent	c.360	p.T120	1.000	NULL	HMMPfam_PX,HMMSmart_SM00312,superfamily_PX domain	-	no_errors
SPEN	23013	genome.wustl.edu	37	1	16260104	16260104	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	1	16260104	16260104	G	A	SNP	SPEN	NM_015001.2	human	genbank	58_37c	+1	reviewed	missense	c.7369	p.D2457N	0.999	NULL	HMMPfam_RRM_1,HMMSmart_RRM,HMMPfam_SPOC,superfamily_SPOC-like,superfamily_SSF54928	-	no_errors
SPEN	23013	genome.wustl.edu	37	1	16260233	16260233	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	1	16260233	16260233	G	C	SNP	SPEN	NM_015001.2	human	genbank	58_37c	+1	reviewed	missense	c.7498	p.E2500Q	1.000	NULL	HMMPfam_RRM_1,HMMSmart_RRM,HMMPfam_SPOC,superfamily_SPOC-like,superfamily_SSF54928	-	no_errors
SPEN	23013	genome.wustl.edu	37	1	16260482	16260482	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	1	16260482	16260482	G	A	SNP	SPEN	NM_015001.2	human	genbank	58_37c	+1	reviewed	missense	c.7747	p.E2583K	0.915	NULL	HMMPfam_RRM_1,HMMSmart_RRM,HMMPfam_SPOC,superfamily_SPOC-like,superfamily_SSF54928	-	no_errors
SPEN	23013	genome.wustl.edu	37	1	16260814	16260814	+	Silent	SNP	G	G	C	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	1	16260814	16260814	G	C	SNP	SPEN	NM_015001.2	human	genbank	58_37c	+1	reviewed	silent	c.8079	p.L2693	0.586	NULL	HMMPfam_RRM_1,HMMSmart_RRM,HMMPfam_SPOC,superfamily_SPOC-like,superfamily_SSF54928	-	no_errors
SPEN	23013	genome.wustl.edu	37	1	16262320	16262320	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	1	16262320	16262320	G	A	SNP	SPEN	NM_015001.2	human	genbank	58_37c	+1	reviewed	silent	c.9585	p.V3195	0.789	NULL	HMMPfam_RRM_1,HMMSmart_RRM,HMMPfam_SPOC,superfamily_SPOC-like,superfamily_SSF54928	-	no_errors
STARD13	90627	genome.wustl.edu	37	13	33859651	33859651	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	13	33859651	33859651	C	G	SNP	STARD13	NM_178006.3	human	genbank	58_37c	-1	validated	missense	c.125	p.S42T	1.000	NULL	HMMPfam_RhoGAP,HMMSmart_SM00324,HMMPfam_START,HMMSmart_SM00234,superfamily_GTPase activation domain GAP,HMMPfam_SAM_2,superfamily_Bet v1-like	-	no_errors
STRN	6801	genome.wustl.edu	37	2	37076895	37076895	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	2	37076895	37076895	A	-	DEL	STRN	NM_003162.2	human	genbank	58_37c	-1	validated	frame_shift_del	c.2135	p.L712fs	1.000	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_Striatin,PatternScan_WD_REPEATS_1,HMMPfam_WD40	-	no_errors
SUN1	0	genome.wustl.edu	37	7	882998	882998	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	7	882998	882998	C	G	SNP	SUN1	NM_001130965.2	human	genbank	58_37c	+1	reviewed	missense	c.499	p.Q167E	0.999	HMMPfam_MRP	HMMPfam_Sad1_UNC,HMMPfam_MRP	-	no_errors
SYNE1	23345	genome.wustl.edu	37	6	152623079	152623079	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	6	152623079	152623079	C	T	SNP	SYNE1	NM_182961.2	human	genbank	58_37c	-1	reviewed	silent	c.17466	p.E5822	1.000	HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_Spectrin repeat	PatternScan_ACTININ_1,PatternScan_ACTININ_2,HMMPfam_CH,HMMSmart_SM00033,HMMPfam_Spectrin,HMMPfam_KASH,superfamily_Calponin-homology domain CH-domain,HMMSmart_SM00150,superfamily_Spectrin repeat	-	no_errors
TDRD3	81550	genome.wustl.edu	37	13	61057959	61057959	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	13	61057959	61057959	G	A	SNP	TDRD3	NM_030794.2	human	genbank	58_37c	+1	validated	silent	c.267	p.P89	1.000	NULL	HMMPfam_UBA,HMMSmart_SM00333,HMMPfam_TUDOR,superfamily_UBA-like,HMMSmart_SM00165,superfamily_Tudor/PWWP/MBT	-	no_errors
TMEM169	92691	genome.wustl.edu	37	2	216964838	216964838	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	2	216964838	216964838	G	A	SNP	TMEM169	NM_001142310.1	human	genbank	58_37c	+1	validated	missense	c.467	p.R156H	0.841	NULL	NULL	-	no_errors
TMEM47	83604	genome.wustl.edu	37	X	34657505	34657505	+	Splice_Site	SNP	C	C	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	X	34657505	34657505	C	T	SNP	TMEM47	NM_031442.3	human	genbank	58_37c	-1	reviewed	splice_site	c.227-1	e2-1	1.000	-	-	-	no_errors
TNK1	8711	genome.wustl.edu	37	17	7286594	7286594	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	17	7286594	7286594	G	A	SNP	TNK1	NM_003985.3	human	genbank	58_37c	+1	validated	silent	c.189	p.L63	1.000	NULL	HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,HMMSmart_SH3,superfamily_SH3,PatternScan_PROTEIN_KINASE_TYR,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP	-	no_errors
TP53	7157	genome.wustl.edu	37	17	7577580	7577580	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	17	7577580	7577580	T	C	SNP	TP53	NM_000546.4	human	genbank	58_37c	-1	reviewed	missense	c.701	p.Y234C	1.000	superfamily_p53-like transcription factors,HMMPfam_P53	PatternScan_P53,superfamily_p53-like transcription factors,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain,HMMPfam_P53,HMMPfam_P53_TAD	-	no_errors
TRAPPC4	51399	genome.wustl.edu	37	11	118890872	118890872	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	11	118890872	118890872	C	T	SNP	TRAPPC4	NM_016146.4	human	genbank	58_37c	+1	validated	silent	c.363	p.I121	0.998	HMMPfam_Sybindin,superfamily_SNARE-like	HMMPfam_Sybindin,superfamily_SNARE-like	-	no_errors
TRERF1	55809	genome.wustl.edu	37	6	42200628	42200628	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	6	42200628	42200628	C	T	SNP	TRERF1	NM_033502.2	human	genbank	58_37c	-1	reviewed	silent	c.3069	p.V1023	1.000	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	HMMPfam_ELM2,HMMSmart_SM00717,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,superfamily_Homeodomain-like,HMMPfam_Myb_DNA-binding,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
TREX2	11219	genome.wustl.edu	37	X	152710422	152710422	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	X	152710422	152710422	C	A	SNP	TREX2	NM_080701.3	human	genbank	58_37c	-1	reviewed	missense	c.467	p.R156L	0.057	HMMSmart_EXOIII,superfamily_RNaseH_fold,HMMPfam_Exonuc_X-T	HMMSmart_EXOIII,superfamily_RNaseH_fold,HMMPfam_Exonuc_X-T	-	no_errors
TRMT2B	79979	genome.wustl.edu	37	X	100275496	100275496	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	X	100275496	100275496	C	T	SNP	TRMT2B	NM_024917.5	human	genbank	58_37c	-1	reviewed	missense	c.1148	p.R383K	1.000	HMMPfam_MTS,superfamily_S-adenosyl-L-methionine-dependent methyltransferases	HMMPfam_MTS,superfamily_S-adenosyl-L-methionine-dependent methyltransferases	-	no_errors
TRPC5	7224	genome.wustl.edu	37	X	111155925	111155925	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	X	111155925	111155925	C	T	SNP	TRPC5	NM_012471.2	human	genbank	58_37c	-1	reviewed	missense	c.494	p.R165Q	1.000	HMMSmart_SM00248,superfamily_Ankyrin repeat	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat,HMMPfam_Ion_trans,HMMPfam_TRP_2,PatternScan_RIBOSOMAL_S2_1	-	no_errors
TRPS1	7227	genome.wustl.edu	37	8	116427084	116427084	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	8	116427084	116427084	C	T	SNP	TRPS1	NM_014112.2	human	genbank	58_37c	-1	reviewed	missense	c.3052	p.E1018K	0.998	NULL	HMMPfam_GATA,HMMSmart_ZnF_GATA,PatternScan_GATA_ZN_FINGER_1,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57716	-	no_errors
TTN	7273	genome.wustl.edu	37	2	179422744	179422744	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	2	179422744	179422744	C	T	SNP	TTN	ENST00000356127	human	ensembl	58_37c	-1	known	missense	c.79627	p.G26543R	1.000	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_IG_MHC,HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,HMMPfam_PPAK,PatternScan_PROTEIN_KINASE_TYR,HMMPfam_I-set,HMMPfam_ig,HMMPfam_Titin_Z,HMMPfam_Pkinase,PatternScan_FGGY_KINASES_1,PatternScan_PEROXIDASE_1	-	no_errors
UMODL1	89766	genome.wustl.edu	37	21	43496237	43496237	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	21	43496237	43496237	G	-	DEL	UMODL1	NM_173568.3	human	genbank	58_37c	+1	validated	frame_shift_del	c.200	p.W67fs	0.214	HMMPfam_EMI	HMMPfam_SEA,PatternScan_ASX_HYDROXYL,HMMPfam_Zona_pellucida,HMMSmart_SM00241,HMMSmart_SM00179,HMMPfam_fn3,HMMSmart_SM00060,HMMPfam_WAP,HMMSmart_SM00217,superfamily_Elafin-like,superfamily_Fibronectin type III,HMMPfam_EMI,HMMPfam_EGF_CA,PatternScan_4_DISULFIDE_CORE,PatternScan_EGF_CA,superfamily_EGF/Laminin,superfamily_SEA domain	-	no_errors
UMODL1	89766	genome.wustl.edu	37	21	43496238	43496238	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	21	43496238	43496238	G	C	SNP	UMODL1	NM_173568.3	human	genbank	58_37c	+1	validated	missense	c.201	p.W67C	0.188	HMMPfam_EMI	HMMPfam_SEA,PatternScan_ASX_HYDROXYL,HMMPfam_Zona_pellucida,HMMSmart_SM00241,HMMSmart_SM00179,HMMPfam_fn3,HMMSmart_SM00060,HMMPfam_WAP,HMMSmart_SM00217,superfamily_Elafin-like,superfamily_Fibronectin type III,HMMPfam_EMI,HMMPfam_EGF_CA,PatternScan_4_DISULFIDE_CORE,PatternScan_EGF_CA,superfamily_EGF/Laminin,superfamily_SEA domain	-	no_errors
WDR66	144406	genome.wustl.edu	37	12	122413473	122413473	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	12	122413473	122413473	C	T	SNP	WDR66	NM_144668.4	human	genbank	58_37c	+1	validated	missense	c.2888	p.S963F	0.297	NULL	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40,superfamily_EF-hand	-	no_errors
WRN	7486	genome.wustl.edu	37	8	30954325	30954325	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	8	30954325	30954325	C	T	SNP	WRN	NM_000553.4	human	genbank	58_37c	+1	reviewed	missense	c.1940	p.S647L	0.829	HMMPfam_DEAD,HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_Helicase_C,HMMSmart_SM00490,HMMPfam_HRDC,HMMSmart_SM00341,HMMPfam_3_5_exonuc,HMMSmart_SM00474,HMMPfam_DEAD,superfamily_Ribonuclease H-like,HMMSmart_SM00487,HMMPfam_RQC,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
ZAP70	7535	genome.wustl.edu	37	2	98354504	98354504	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	2	98354504	98354504	G	A	SNP	ZAP70	NM_001079.3	human	genbank	58_37c	+1	reviewed	missense	c.1670	p.R557Q	1.000	HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like)	HMMPfam_SH2,HMMSmart_SM00252,HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_TYR,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,superfamily_SH2 domain	-	no_errors
ZDBF2	57683	genome.wustl.edu	37	2	207175781	207175781	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	2	207175781	207175781	C	G	SNP	ZDBF2	NM_020923.1	human	genbank	58_37c	+1	validated	missense	c.6529	p.H2177D	0.000	NULL	HMMPfam_zf-DBF	-	no_errors
ZFHX4	79776	genome.wustl.edu	37	8	77765466	77765466	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	8	77765466	77765466	C	T	SNP	ZFHX4	NM_024721.4	human	genbank	58_37c	+1	validated	silent	c.6174	p.D2058	0.382	NULL	HMMPfam_Homeobox,HMMSmart_SM00389,HMMSmart_SM00451,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,superfamily_Homeodomain-like,HMMSmart_SM00355,PatternScan_HOMEOBOX_1,PatternScan_SOMATOTROPIN_2,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZIC1	7545	genome.wustl.edu	37	3	147128456	147128456	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	3	147128456	147128456	C	T	SNP	ZIC1	NM_003412.3	human	genbank	58_37c	+1	reviewed	missense	c.557	p.S186L	1.000	NULL	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
ZNF211	10520	genome.wustl.edu	37	19	58152315	58152315	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	19	58152315	58152315	A	T	SNP	ZNF211	NM_006385.3	human	genbank	58_37c	+1	validated	missense	c.500	p.Q167L	0.007	HMMSmart_ZnF_C2H2,superfamily_SSF57667	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
ZNF467	168544	genome.wustl.edu	37	7	149461892	149461892	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	7	149461892	149461892	C	T	SNP	ZNF467	NM_207336.1	human	genbank	58_37c	-1	provisional	missense	c.1699	p.E567K	0.021	NULL	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
ZNF473	25888	genome.wustl.edu	37	19	50550264	50550264	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	19	50550264	50550264	C	G	SNP	ZNF473	NM_001006656.1	human	genbank	58_37c	+1	validated	missense	c.2564	p.S855W	0.000	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZNF527	84503	genome.wustl.edu	37	19	37880726	37880726	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	19	37880726	37880726	G	T	SNP	ZNF527	NM_032453.1	human	genbank	58_37c	+1	validated	missense	c.1775	p.S592I	0.086	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZNF587	84914	genome.wustl.edu	37	19	58370801	58370801	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	19	58370801	58370801	C	T	SNP	ZNF587	ENST00000339656	human	ensembl	58_37c	+1	known	nonsense	c.1021	p.Q341*	0.000	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
ZNF625	90589	genome.wustl.edu	37	19	12256707	12256707	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	19	12256707	12256707	C	T	SNP	ZNF625	NM_145233.2	human	genbank	58_37c	-1	provisional	missense	c.326	p.R109H	0.000	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZNF626	199777	genome.wustl.edu	37	19	20808023	20808023	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	19	20808023	20808023	C	G	SNP	ZNF626	NM_001076675.2	human	genbank	58_37c	-1	validated	missense	c.660	p.K220N	0.777	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZNF92	168374	genome.wustl.edu	37	7	64853754	64853754	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0EY-01A-11W-A050-09	TCGA-A2-A0EY-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a8cde596-e3f5-4b20-9e7f-45d079893176	b1d7c034-0cf5-40ce-8620-35248ca45e08	7	64853754	64853754	C	T	SNP	ZNF92	NM_152626.2	human	genbank	58_37c	+1	validated	silent	c.166	p.L56	0.995	HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352)	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
